HEADER LYASE 03-JUN-15 5BTU TITLE THE STRUCTURE OF DIELS-ALDERASE PYRI4 IN THE BIOSYNTHETIC PATHWAY OF TITLE 2 PYRROINDOMYCINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRI4; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES RUGOSPORUS; SOURCE 3 ORGANISM_TAXID: 295838; SOURCE 4 GENE: PYRI4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3)PLYSS AG; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS BETA-BARREL, DIELS-ALDERASE, PYRROINDOMYCINS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR L.PAN,Y.GUO,J.LIU REVDAT 2 30-MAR-16 5BTU 1 JRNL REVDAT 1 24-FEB-16 5BTU 0 JRNL AUTH Q.ZHENG,Y.GUO,L.YANG,Z.ZHAO,Z.WU,H.ZHANG,J.LIU,X.CHENG,J.WU, JRNL AUTH 2 H.YANG,H.JIANG,L.PAN,W.LIU JRNL TITL ENZYME-DEPENDENT [4 + 2] CYCLOADDITION DEPENDS ON LID-LIKE JRNL TITL 2 INTERACTION OF THE N-TERMINAL SEQUENCE WITH THE CATALYTIC JRNL TITL 3 CORE IN PYRI4 JRNL REF CELL CHEM BIOL V. 23 352 2016 JRNL REFN ISSN 2451-9456 JRNL PMID 26877021 JRNL DOI 10.1016/J.CHEMBIOL.2016.01.005 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 11215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780 REMARK 3 FREE R VALUE TEST SET COUNT : 536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.1660 - 3.9722 0.98 2655 124 0.1558 0.2012 REMARK 3 2 3.9722 - 3.1533 1.00 2703 132 0.1893 0.2758 REMARK 3 3 3.1533 - 2.7548 0.99 2687 135 0.2291 0.3235 REMARK 3 4 2.7548 - 2.5030 0.99 2634 145 0.2448 0.3703 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2467 REMARK 3 ANGLE : 1.753 3339 REMARK 3 CHIRALITY : 0.084 394 REMARK 3 PLANARITY : 0.008 432 REMARK 3 DIHEDRAL : 19.575 888 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7585 -10.0344 27.8400 REMARK 3 T TENSOR REMARK 3 T11: 0.9295 T22: 0.7913 REMARK 3 T33: 0.8366 T12: 0.1269 REMARK 3 T13: 0.0073 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.2715 L22: 0.1791 REMARK 3 L33: 0.5881 L12: 0.2207 REMARK 3 L13: 0.2173 L23: 0.0438 REMARK 3 S TENSOR REMARK 3 S11: 0.5110 S12: -0.5494 S13: 0.0195 REMARK 3 S21: 0.2668 S22: 0.0697 S23: -0.2081 REMARK 3 S31: 0.5773 S32: 0.0705 S33: 0.0014 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3225 -16.5503 30.2452 REMARK 3 T TENSOR REMARK 3 T11: 1.2936 T22: 0.9325 REMARK 3 T33: 0.8250 T12: -0.0107 REMARK 3 T13: 0.1768 T23: 0.1690 REMARK 3 L TENSOR REMARK 3 L11: 0.2752 L22: 0.3320 REMARK 3 L33: 0.2717 L12: 0.0079 REMARK 3 L13: 0.2623 L23: -0.1166 REMARK 3 S TENSOR REMARK 3 S11: 0.2923 S12: -0.6620 S13: -0.7918 REMARK 3 S21: 0.4741 S22: 0.2271 S23: 0.3613 REMARK 3 S31: 1.0463 S32: 0.3411 S33: 0.0075 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1382 -6.2142 5.3787 REMARK 3 T TENSOR REMARK 3 T11: 0.9060 T22: 0.6870 REMARK 3 T33: 0.6527 T12: -0.2003 REMARK 3 T13: 0.0476 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 0.6285 L22: 0.2050 REMARK 3 L33: 0.8880 L12: 0.2847 REMARK 3 L13: 0.7919 L23: 0.1567 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: 0.0364 S13: 0.1343 REMARK 3 S21: -0.0266 S22: 0.3861 S23: 0.3920 REMARK 3 S31: 0.0669 S32: -0.0515 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9473 -2.9257 12.0753 REMARK 3 T TENSOR REMARK 3 T11: 0.7513 T22: 0.8016 REMARK 3 T33: 0.6315 T12: -0.1440 REMARK 3 T13: 0.0357 T23: -0.0527 REMARK 3 L TENSOR REMARK 3 L11: 0.0521 L22: 0.6455 REMARK 3 L33: 0.7970 L12: -0.1810 REMARK 3 L13: 0.0425 L23: -0.0529 REMARK 3 S TENSOR REMARK 3 S11: -0.7195 S12: 0.4310 S13: -0.1249 REMARK 3 S21: -0.3205 S22: 0.8126 S23: -0.1018 REMARK 3 S31: 0.0613 S32: 0.2315 S33: -0.0010 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1940 -0.7131 15.2965 REMARK 3 T TENSOR REMARK 3 T11: 0.5512 T22: 0.9559 REMARK 3 T33: 0.7550 T12: -0.1249 REMARK 3 T13: 0.0482 T23: -0.1766 REMARK 3 L TENSOR REMARK 3 L11: 0.0625 L22: 0.1055 REMARK 3 L33: 0.0474 L12: -0.0807 REMARK 3 L13: 0.0235 L23: 0.0036 REMARK 3 S TENSOR REMARK 3 S11: -0.2127 S12: 1.3274 S13: -0.1954 REMARK 3 S21: -0.6659 S22: 0.9209 S23: 0.0291 REMARK 3 S31: -0.6885 S32: 0.9675 S33: 0.0028 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4750 -8.3598 18.8487 REMARK 3 T TENSOR REMARK 3 T11: 0.5187 T22: 0.7582 REMARK 3 T33: 0.6663 T12: -0.1487 REMARK 3 T13: 0.0352 T23: -0.0628 REMARK 3 L TENSOR REMARK 3 L11: 0.3122 L22: 1.2563 REMARK 3 L33: 0.5090 L12: -0.5136 REMARK 3 L13: 0.1312 L23: 0.0931 REMARK 3 S TENSOR REMARK 3 S11: -0.3905 S12: 1.0265 S13: 0.3766 REMARK 3 S21: 0.1005 S22: 0.2849 S23: 0.0486 REMARK 3 S31: 0.1164 S32: -0.0331 S33: 0.0003 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 160 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5370 -8.5000 19.3310 REMARK 3 T TENSOR REMARK 3 T11: 0.8649 T22: 0.6491 REMARK 3 T33: 0.7262 T12: -0.0687 REMARK 3 T13: -0.0501 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: -0.0001 L22: 0.0979 REMARK 3 L33: -0.0021 L12: 0.0054 REMARK 3 L13: -0.0064 L23: 0.0109 REMARK 3 S TENSOR REMARK 3 S11: 0.4443 S12: 1.4860 S13: 0.0139 REMARK 3 S21: -0.3704 S22: -0.0537 S23: 0.0660 REMARK 3 S31: 0.7472 S32: -1.1360 S33: -0.0052 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2452 -11.4880 13.3576 REMARK 3 T TENSOR REMARK 3 T11: 0.6191 T22: 0.7415 REMARK 3 T33: 0.7598 T12: -0.0891 REMARK 3 T13: 0.0730 T23: -0.2054 REMARK 3 L TENSOR REMARK 3 L11: 0.3236 L22: 1.0565 REMARK 3 L33: 0.3216 L12: 0.1299 REMARK 3 L13: 0.3178 L23: -0.0175 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: -0.3650 S13: -0.1141 REMARK 3 S21: -0.0868 S22: 0.5168 S23: -0.2708 REMARK 3 S31: 1.1188 S32: 0.1197 S33: 0.0076 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6683 10.0610 16.7619 REMARK 3 T TENSOR REMARK 3 T11: 0.9677 T22: 0.8194 REMARK 3 T33: 0.8513 T12: -0.0770 REMARK 3 T13: 0.0659 T23: -0.0439 REMARK 3 L TENSOR REMARK 3 L11: 0.1976 L22: 0.1940 REMARK 3 L33: 0.4677 L12: -0.2151 REMARK 3 L13: -0.2535 L23: 0.3016 REMARK 3 S TENSOR REMARK 3 S11: 0.1932 S12: 1.1451 S13: 0.5063 REMARK 3 S21: -0.3752 S22: 0.0184 S23: -0.2359 REMARK 3 S31: -0.7127 S32: 0.7416 S33: -0.0006 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9501 6.7270 31.9273 REMARK 3 T TENSOR REMARK 3 T11: 0.6380 T22: 0.6927 REMARK 3 T33: 0.6261 T12: 0.1149 REMARK 3 T13: -0.0138 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.0940 L22: 1.7265 REMARK 3 L33: 2.7763 L12: 0.5837 REMARK 3 L13: -0.0769 L23: 0.8695 REMARK 3 S TENSOR REMARK 3 S11: -0.2734 S12: -0.1520 S13: 0.0334 REMARK 3 S21: 0.2064 S22: 0.4786 S23: -0.0674 REMARK 3 S31: -0.1656 S32: -0.1528 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 141 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3408 9.5844 27.9021 REMARK 3 T TENSOR REMARK 3 T11: 0.5255 T22: 0.6244 REMARK 3 T33: 0.6349 T12: 0.0833 REMARK 3 T13: -0.0130 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.5771 L22: 0.9515 REMARK 3 L33: 1.0111 L12: -0.0702 REMARK 3 L13: -0.3633 L23: 0.5830 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.1257 S13: -0.0352 REMARK 3 S21: -0.1325 S22: 0.1983 S23: -0.1902 REMARK 3 S31: -0.0723 S32: -0.1550 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BTU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210528. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11339 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.420 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 43.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.60 REMARK 200 R MERGE FOR SHELL (I) : 0.96900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX 1.8.2_1309 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, TRIS-HCL, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.47267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.73633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 GLN A 5 REMARK 465 ILE A 6 REMARK 465 ASP A 7 REMARK 465 GLU A 8 REMARK 465 ARG A 9 REMARK 465 ALA A 10 REMARK 465 MSE A 11 REMARK 465 GLU A 12 REMARK 465 ALA A 13 REMARK 465 GLY A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 LEU A 18 REMARK 465 GLN A 19 REMARK 465 GLU A 20 REMARK 465 THR A 21 REMARK 465 ILE A 22 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 PRO B 4 REMARK 465 GLN B 5 REMARK 465 ILE B 6 REMARK 465 ASP B 7 REMARK 465 GLU B 8 REMARK 465 ARG B 9 REMARK 465 ALA B 10 REMARK 465 MSE B 11 REMARK 465 GLU B 12 REMARK 465 ALA B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 ALA B 17 REMARK 465 LEU B 18 REMARK 465 GLN B 19 REMARK 465 GLU B 20 REMARK 465 THR B 21 REMARK 465 ILE B 22 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 44 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 48 CG OD1 OD2 REMARK 470 ASP A 49 CG OD1 OD2 REMARK 470 HIS B 44 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 48 CG OD1 OD2 REMARK 470 ASP B 49 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 57 HG CYS A 184 1.27 REMARK 500 C LYS A 108 H MSE A 109 1.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 96 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 91 -164.50 -78.85 REMARK 500 ASP B 48 -74.46 -85.32 REMARK 500 ARG B 142 31.70 72.78 REMARK 500 ARG B 152 -28.68 -144.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BU3 RELATED DB: PDB DBREF 5BTU A 11 184 UNP K7QVW7 K7QVW7_9ACTO 1 174 DBREF 5BTU B 11 184 UNP K7QVW7 K7QVW7_9ACTO 1 174 SEQADV 5BTU MSE A 1 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU THR A 2 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU THR A 3 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU PRO A 4 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU GLN A 5 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ILE A 6 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ASP A 7 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU GLU A 8 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ARG A 9 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ALA A 10 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU MSE B 1 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU THR B 2 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU THR B 3 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU PRO B 4 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU GLN B 5 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ILE B 6 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ASP B 7 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU GLU B 8 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ARG B 9 UNP K7QVW7 EXPRESSION TAG SEQADV 5BTU ALA B 10 UNP K7QVW7 EXPRESSION TAG SEQRES 1 A 184 MSE THR THR PRO GLN ILE ASP GLU ARG ALA MSE GLU ALA SEQRES 2 A 184 GLY ALA ALA ALA LEU GLN GLU THR ILE VAL ASP PRO GLY SEQRES 3 A 184 PRO LEU ASP VAL THR ALA LEU ALA VAL ALA ALA ALA LEU SEQRES 4 A 184 ALA ALA GLY LEU HIS SER ALA ALA ASP ASP PRO ALA ALA SEQRES 5 A 184 ALA LEU ASP LYS CYS ILE VAL LEU ASP GLU LEU THR GLU SEQRES 6 A 184 PHE ALA GLU LYS LEU VAL VAL HIS ASP ARG PRO GLY GLY SEQRES 7 A 184 ILE GLY THR THR VAL GLU TYR VAL GLU VAL TYR GLU ASP SEQRES 8 A 184 ALA SER GLY VAL ARG LEU GLY THR ALA THR GLY ASN ALA SEQRES 9 A 184 VAL VAL LEU LYS MSE GLU PRO HIS MSE TRP GLN PHE HIS SEQRES 10 A 184 GLN SER VAL SER GLU LEU ALA ASP GLY SER PHE GLU ALA SEQRES 11 A 184 VAL GLY VAL ILE ASP CYS THR ALA MSE LEU ARG ARG MSE SEQRES 12 A 184 THR GLN VAL LEU ARG VAL THR GLY ARG SER GLY ARG TYR SEQRES 13 A 184 ALA GLY LYS SER GLY PHE MSE THR LEU ALA ILE SER ASP SEQRES 14 A 184 PRO ASN GLN ARG PRO PRO HIS TYR SER VAL GLN VAL VAL SEQRES 15 A 184 LEU CYS SEQRES 1 B 184 MSE THR THR PRO GLN ILE ASP GLU ARG ALA MSE GLU ALA SEQRES 2 B 184 GLY ALA ALA ALA LEU GLN GLU THR ILE VAL ASP PRO GLY SEQRES 3 B 184 PRO LEU ASP VAL THR ALA LEU ALA VAL ALA ALA ALA LEU SEQRES 4 B 184 ALA ALA GLY LEU HIS SER ALA ALA ASP ASP PRO ALA ALA SEQRES 5 B 184 ALA LEU ASP LYS CYS ILE VAL LEU ASP GLU LEU THR GLU SEQRES 6 B 184 PHE ALA GLU LYS LEU VAL VAL HIS ASP ARG PRO GLY GLY SEQRES 7 B 184 ILE GLY THR THR VAL GLU TYR VAL GLU VAL TYR GLU ASP SEQRES 8 B 184 ALA SER GLY VAL ARG LEU GLY THR ALA THR GLY ASN ALA SEQRES 9 B 184 VAL VAL LEU LYS MSE GLU PRO HIS MSE TRP GLN PHE HIS SEQRES 10 B 184 GLN SER VAL SER GLU LEU ALA ASP GLY SER PHE GLU ALA SEQRES 11 B 184 VAL GLY VAL ILE ASP CYS THR ALA MSE LEU ARG ARG MSE SEQRES 12 B 184 THR GLN VAL LEU ARG VAL THR GLY ARG SER GLY ARG TYR SEQRES 13 B 184 ALA GLY LYS SER GLY PHE MSE THR LEU ALA ILE SER ASP SEQRES 14 B 184 PRO ASN GLN ARG PRO PRO HIS TYR SER VAL GLN VAL VAL SEQRES 15 B 184 LEU CYS MODRES 5BTU MSE A 109 MET MODIFIED RESIDUE MODRES 5BTU MSE A 113 MET MODIFIED RESIDUE MODRES 5BTU MSE A 139 MET MODIFIED RESIDUE MODRES 5BTU MSE A 143 MET MODIFIED RESIDUE MODRES 5BTU MSE A 163 MET MODIFIED RESIDUE MODRES 5BTU MSE B 109 MET MODIFIED RESIDUE MODRES 5BTU MSE B 113 MET MODIFIED RESIDUE MODRES 5BTU MSE B 139 MET MODIFIED RESIDUE MODRES 5BTU MSE B 143 MET MODIFIED RESIDUE MODRES 5BTU MSE B 163 MET MODIFIED RESIDUE HET MSE A 109 17 HET MSE A 113 17 HET MSE A 139 17 HET MSE A 143 17 HET MSE A 163 17 HET MSE B 109 17 HET MSE B 113 17 HET MSE B 139 17 HET MSE B 143 17 HET MSE B 163 17 HET GOL A 201 14 HET PEG A 202 17 HET PEG A 203 17 HET PEG A 204 17 HET PEG B 201 17 HET PEG B 202 17 HET PEG B 203 17 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 GOL C3 H8 O3 FORMUL 4 PEG 6(C4 H10 O3) FORMUL 10 HOH *10(H2 O) HELIX 1 AA1 ASP A 29 GLY A 42 1 14 HELIX 2 AA2 HIS A 44 ASP A 49 1 6 HELIX 3 AA3 ASP A 49 CYS A 57 1 9 HELIX 4 AA4 CYS A 136 ARG A 141 1 6 HELIX 5 AA5 ASP B 29 GLY B 42 1 14 HELIX 6 AA6 HIS B 44 ASP B 49 1 6 HELIX 7 AA7 ASP B 49 CYS B 57 1 9 HELIX 8 AA8 CYS B 136 ARG B 141 1 6 SHEET 1 AA1 9 ILE A 58 HIS A 73 0 SHEET 2 AA1 9 THR A 82 GLU A 90 -1 O THR A 82 N HIS A 73 SHEET 3 AA1 9 ARG A 96 LYS A 108 -1 O LEU A 97 N TYR A 89 SHEET 4 AA1 9 TRP A 114 LEU A 123 -1 O GLU A 122 N THR A 99 SHEET 5 AA1 9 GLY A 126 ASP A 135 -1 O GLY A 126 N LEU A 123 SHEET 6 AA1 9 GLN A 145 GLY A 154 -1 O THR A 150 N GLU A 129 SHEET 7 AA1 9 SER A 160 ILE A 167 -1 O MSE A 163 N LEU A 147 SHEET 8 AA1 9 TYR A 177 CYS A 184 -1 O CYS A 184 N SER A 160 SHEET 9 AA1 9 ILE A 58 HIS A 73 -1 N ILE A 58 O LEU A 183 SHEET 1 AA2 9 ILE B 58 HIS B 73 0 SHEET 2 AA2 9 THR B 82 GLU B 90 -1 O GLU B 90 N THR B 64 SHEET 3 AA2 9 ARG B 96 LYS B 108 -1 O LEU B 97 N TYR B 89 SHEET 4 AA2 9 TRP B 114 GLU B 122 -1 O GLU B 122 N THR B 99 SHEET 5 AA2 9 GLY B 126 ASP B 135 -1 O ILE B 134 N GLN B 115 SHEET 6 AA2 9 GLN B 145 GLY B 154 -1 O THR B 150 N GLU B 129 SHEET 7 AA2 9 SER B 160 ILE B 167 -1 O MSE B 163 N LEU B 147 SHEET 8 AA2 9 TYR B 177 CYS B 184 -1 O CYS B 184 N SER B 160 SHEET 9 AA2 9 ILE B 58 HIS B 73 -1 N ILE B 58 O LEU B 183 SSBOND 1 CYS A 57 CYS A 184 1555 1555 2.03 SSBOND 2 CYS B 57 CYS B 184 1555 1555 2.04 LINK C LYS A 108 N MSE A 109 1555 1555 1.32 LINK C MSE A 109 N GLU A 110 1555 1555 1.33 LINK C HIS A 112 N MSE A 113 1555 1555 1.33 LINK C MSE A 113 N TRP A 114 1555 1555 1.32 LINK C ALA A 138 N MSE A 139 1555 1555 1.33 LINK C MSE A 139 N LEU A 140 1555 1555 1.34 LINK C ARG A 142 N MSE A 143 1555 1555 1.32 LINK C MSE A 143 N THR A 144 1555 1555 1.32 LINK C PHE A 162 N MSE A 163 1555 1555 1.32 LINK C MSE A 163 N THR A 164 1555 1555 1.32 LINK C LYS B 108 N MSE B 109 1555 1555 1.33 LINK C MSE B 109 N GLU B 110 1555 1555 1.33 LINK C HIS B 112 N MSE B 113 1555 1555 1.32 LINK C MSE B 113 N TRP B 114 1555 1555 1.32 LINK C ALA B 138 N MSE B 139 1555 1555 1.32 LINK C MSE B 139 N LEU B 140 1555 1555 1.34 LINK C ARG B 142 N MSE B 143 1555 1555 1.32 LINK C MSE B 143 N THR B 144 1555 1555 1.32 LINK C PHE B 162 N MSE B 163 1555 1555 1.32 LINK C MSE B 163 N THR B 164 1555 1555 1.33 CISPEP 1 GLU A 110 PRO A 111 0 -5.46 CISPEP 2 ARG A 173 PRO A 174 0 2.90 CISPEP 3 PRO B 25 GLY B 26 0 4.34 CISPEP 4 GLU B 110 PRO B 111 0 2.81 CISPEP 5 ARG B 173 PRO B 174 0 -8.80 SITE 1 AC1 5 GLY A 132 VAL A 133 VAL A 146 GLY B 132 SITE 2 AC1 5 VAL B 146 SITE 1 AC2 4 GLU A 65 TYR A 85 HIS A 117 SER A 119 SITE 1 AC3 4 MSE A 109 MSE A 113 GLU B 68 ARG B 96 SITE 1 AC4 2 LEU A 97 GLY A 98 SITE 1 AC5 2 LEU B 97 GLU B 122 SITE 1 AC6 4 GLU B 65 GLN B 115 HIS B 117 PEG B 203 SITE 1 AC7 2 GLU A 68 PEG B 202 CRYST1 47.379 47.379 131.209 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021106 0.012186 0.000000 0.00000 SCALE2 0.000000 0.024372 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007621 0.00000