HEADER CELL ADHESION 04-JUN-15 5BUP TITLE CRYSTAL STRUCTURE OF THE ZP-C DOMAIN OF MOUSE ZP2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZONA PELLUCIDA SPERM-BINDING PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 463-664; COMPND 5 SYNONYM: ZONA PELLUCIDA GLYCOPROTEIN 2,ZP-2,ZONA PELLUCIDA PROTEIN A; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ZP2, ZP-2, ZPA; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK-293T; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS SPERM RECEPTOR, IMMUNOGLOBULIN-LIKE DOMAIN, ZONA PELLUCIDA, ZP KEYWDS 2 DOMAIN, PROTEIN POLYMERIZATION, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR K.NISHIMURA,L.JOVINE REVDAT 5 23-OCT-24 5BUP 1 REMARK REVDAT 4 06-SEP-17 5BUP 1 REMARK REVDAT 3 17-FEB-16 5BUP 1 JRNL REVDAT 2 10-FEB-16 5BUP 1 JRNL REVDAT 1 27-JAN-16 5BUP 0 JRNL AUTH M.BOKHOVE,K.NISHIMURA,M.BRUNATI,L.HAN,D.DE SANCTIS, JRNL AUTH 2 L.RAMPOLDI,L.JOVINE JRNL TITL A STRUCTURED INTERDOMAIN LINKER DIRECTS SELF-POLYMERIZATION JRNL TITL 2 OF HUMAN UROMODULIN. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 1552 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 26811476 JRNL DOI 10.1073/PNAS.1519803113 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.D.BLEIL,P.M.WASSARMAN REMARK 1 TITL SYNTHESIS OF ZONA PELLUCIDA PROTEINS BY DENUDED AND REMARK 1 TITL 2 FOLLICLE-ENCLOSED MOUSE OOCYTES DURING CULTURE IN VITRO. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 77 1029 1980 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 6928658 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.D.BLEIL,C.F.BEALL,P.M.WASSARMAN REMARK 1 TITL MAMMALIAN SPERM-EGG INTERACTION: FERTILIZATION OF MOUSE EGGS REMARK 1 TITL 2 TRIGGERS MODIFICATION OF THE MAJOR ZONA PELLUCIDA REMARK 1 TITL 3 GLYCOPROTEIN, ZP2. REMARK 1 REF DEV. BIOL. V. 86 189 1981 REMARK 1 REFN ISSN 0012-1606 REMARK 1 PMID 6793422 REMARK 1 REFERENCE 3 REMARK 1 AUTH E.S.BOJA,T.HOODBHOY,H.M.FALES,J.DEAN REMARK 1 TITL STRUCTURAL CHARACTERIZATION OF NATIVE MOUSE ZONA PELLUCIDA REMARK 1 TITL 2 PROTEINS USING MASS SPECTROMETRY. REMARK 1 REF J. BIOL. CHEM. V. 278 34189 2003 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 12799386 REMARK 1 REFERENCE 4 REMARK 1 AUTH S.KANAI,T.KITAYAMA,N.YONEZAWA,Y.SAWANO,M.TANOKURA,M.NAKANO REMARK 1 TITL DISULFIDE LINKAGE PATTERNS OF PIG ZONA PELLUCIDA REMARK 1 TITL 2 GLYCOPROTEINS ZP3 AND ZP4. REMARK 1 REF MOL. REPROD. DEV. V. 75 847 2008 REMARK 1 REFN ISSN 1098-2795 REMARK 1 PMID 17926344 REMARK 1 REFERENCE 5 REMARK 1 AUTH L.HAN,M.MONNE,H.OKUMURA,T.SCHWEND,A.L.CHERRY,D.FLOT, REMARK 1 AUTH 2 T.MATSUDA,L.JOVINE REMARK 1 TITL INSIGHTS INTO EGG COAT ASSEMBLY AND EGG-SPERM INTERACTION REMARK 1 TITL 2 FROM THE X-RAY STRUCTURE OF FULL-LENGTH ZP3. REMARK 1 REF CELL V. 143 404 2010 REMARK 1 REFN ISSN 1097-4172 REMARK 1 PMID 20970175 REMARK 1 DOI 10.1016/J.CELL.2010.09.041 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV-1924 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 11813 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5666 - 4.3042 0.99 1634 188 0.1800 0.2045 REMARK 3 2 4.3042 - 3.4167 0.99 1588 171 0.1476 0.1873 REMARK 3 3 3.4167 - 2.9849 0.98 1574 172 0.1771 0.1992 REMARK 3 4 2.9849 - 2.7120 0.96 1514 170 0.2279 0.2462 REMARK 3 5 2.7120 - 2.5177 0.93 1473 158 0.2756 0.2983 REMARK 3 6 2.5177 - 2.3692 0.93 1469 166 0.3036 0.3484 REMARK 3 7 2.3692 - 2.2506 0.89 1387 149 0.3430 0.3625 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1309 REMARK 3 ANGLE : 0.859 1782 REMARK 3 CHIRALITY : 0.030 198 REMARK 3 PLANARITY : 0.004 230 REMARK 3 DIHEDRAL : 13.472 481 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESI 642:656 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5705 50.0701 12.3442 REMARK 3 T TENSOR REMARK 3 T11: 0.2685 T22: 0.3190 REMARK 3 T33: 0.2669 T12: 0.0543 REMARK 3 T13: -0.0159 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 3.7121 L22: 2.2563 REMARK 3 L33: 3.6076 L12: -0.5888 REMARK 3 L13: -0.3221 L23: 0.2014 REMARK 3 S TENSOR REMARK 3 S11: -0.0439 S12: 0.2680 S13: 0.0267 REMARK 3 S21: -0.0056 S22: -0.0103 S23: 0.2557 REMARK 3 S31: -0.0079 S32: -0.2608 S33: 0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESI 614:641 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7696 56.1019 25.6329 REMARK 3 T TENSOR REMARK 3 T11: 0.5351 T22: 0.7182 REMARK 3 T33: 0.6113 T12: 0.0192 REMARK 3 T13: 0.0402 T23: -0.0832 REMARK 3 L TENSOR REMARK 3 L11: 0.1830 L22: 0.4002 REMARK 3 L33: 0.3971 L12: 0.0460 REMARK 3 L13: -0.1481 L23: 0.2974 REMARK 3 S TENSOR REMARK 3 S11: 0.2738 S12: -0.2500 S13: 0.0788 REMARK 3 S21: 0.5440 S22: -0.4289 S23: 0.3127 REMARK 3 S31: -0.1877 S32: -0.1614 S33: -0.0020 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESI 642:656 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0776 52.4887 11.4111 REMARK 3 T TENSOR REMARK 3 T11: 0.2507 T22: 0.3754 REMARK 3 T33: 0.2792 T12: 0.1063 REMARK 3 T13: 0.0217 T23: 0.0526 REMARK 3 L TENSOR REMARK 3 L11: 0.8964 L22: 0.7133 REMARK 3 L33: 0.2117 L12: 0.4105 REMARK 3 L13: 0.2149 L23: 0.3682 REMARK 3 S TENSOR REMARK 3 S11: 0.0677 S12: 0.5157 S13: 0.3530 REMARK 3 S21: -0.2854 S22: 0.1295 S23: -0.0996 REMARK 3 S31: -0.0442 S32: -0.2918 S33: -0.0157 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BUP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000206512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97939 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20141103 REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12293 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.251 REMARK 200 RESOLUTION RANGE LOW (A) : 45.557 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.10220 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NEEDLE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1 M SODIUM ACETATE PH REMARK 280 5.5, 0.2 M AMMONIUM SULFATE, 20% GLYCEROL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 13.51667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.03333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.27500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.79167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 6.75833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 460 REMARK 465 THR A 461 REMARK 465 GLY A 462 REMARK 465 ASP A 463 REMARK 465 SER A 464 REMARK 465 MET A 465 REMARK 465 LEU A 466 REMARK 465 LEU A 467 REMARK 465 ASN A 468 REMARK 465 ALA A 469 REMARK 465 HIS A 470 REMARK 465 VAL A 471 REMARK 465 LYS A 472 REMARK 465 GLY A 473 REMARK 465 HIS A 474 REMARK 465 PRO A 475 REMARK 465 SER A 476 REMARK 465 PRO A 477 REMARK 465 GLU A 478 REMARK 465 ALA A 479 REMARK 465 PHE A 480 REMARK 465 VAL A 481 REMARK 465 LYS A 482 REMARK 465 PRO A 483 REMARK 465 GLY A 484 REMARK 465 ARG A 526 REMARK 465 SER A 575 REMARK 465 SER A 576 REMARK 465 ALA A 577 REMARK 465 ALA A 592 REMARK 465 PHE A 593 REMARK 465 VAL A 594 REMARK 465 SER A 595 REMARK 465 GLU A 596 REMARK 465 ALA A 597 REMARK 465 ARG A 598 REMARK 465 GLY A 599 REMARK 465 LEU A 600 REMARK 465 VAL A 657 REMARK 465 SER A 658 REMARK 465 SER A 659 REMARK 465 SER A 660 REMARK 465 LYS A 661 REMARK 465 GLY A 662 REMARK 465 VAL A 663 REMARK 465 ASP A 664 REMARK 465 LEU A 665 REMARK 465 GLU A 666 REMARK 465 HIS A 667 REMARK 465 HIS A 668 REMARK 465 HIS A 669 REMARK 465 HIS A 670 REMARK 465 HIS A 671 REMARK 465 HIS A 672 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 514 -3.19 75.61 REMARK 500 ASP A 536 -76.97 -108.52 REMARK 500 ASN A 565 37.63 72.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 703 DBREF 5BUP A 463 664 UNP P20239 ZP2_MOUSE 463 664 SEQADV 5BUP GLU A 460 UNP P20239 EXPRESSION TAG SEQADV 5BUP THR A 461 UNP P20239 EXPRESSION TAG SEQADV 5BUP GLY A 462 UNP P20239 EXPRESSION TAG SEQADV 5BUP ASN A 634 UNP P20239 LYS 634 ENGINEERED MUTATION SEQADV 5BUP ALA A 635 UNP P20239 ARG 635 ENGINEERED MUTATION SEQADV 5BUP LEU A 665 UNP P20239 EXPRESSION TAG SEQADV 5BUP GLU A 666 UNP P20239 EXPRESSION TAG SEQADV 5BUP HIS A 667 UNP P20239 EXPRESSION TAG SEQADV 5BUP HIS A 668 UNP P20239 EXPRESSION TAG SEQADV 5BUP HIS A 669 UNP P20239 EXPRESSION TAG SEQADV 5BUP HIS A 670 UNP P20239 EXPRESSION TAG SEQADV 5BUP HIS A 671 UNP P20239 EXPRESSION TAG SEQADV 5BUP HIS A 672 UNP P20239 EXPRESSION TAG SEQRES 1 A 213 GLU THR GLY ASP SER MET LEU LEU ASN ALA HIS VAL LYS SEQRES 2 A 213 GLY HIS PRO SER PRO GLU ALA PHE VAL LYS PRO GLY PRO SEQRES 3 A 213 LEU VAL LEU VAL LEU GLN THR TYR PRO ASP GLN SER TYR SEQRES 4 A 213 GLN ARG PRO TYR ARG LYS ASP GLU TYR PRO LEU VAL ARG SEQRES 5 A 213 TYR LEU ARG GLN PRO ILE TYR MET GLU VAL LYS VAL LEU SEQRES 6 A 213 SER ARG ASN ASP PRO ASN ILE LYS LEU VAL LEU ASP ASP SEQRES 7 A 213 CYS TRP ALA THR SER SER GLU ASP PRO ALA SER ALA PRO SEQRES 8 A 213 GLN TRP GLN ILE VAL MET ASP GLY CYS GLU TYR GLU LEU SEQRES 9 A 213 ASP ASN TYR ARG THR THR PHE HIS PRO ALA GLY SER SER SEQRES 10 A 213 ALA ALA HIS SER GLY HIS TYR GLN ARG PHE ASP VAL LYS SEQRES 11 A 213 THR PHE ALA PHE VAL SER GLU ALA ARG GLY LEU SER SER SEQRES 12 A 213 LEU ILE TYR PHE HIS CYS SER ALA LEU ILE CYS ASN GLN SEQRES 13 A 213 VAL SER LEU ASP SER PRO LEU CYS SER VAL THR CYS PRO SEQRES 14 A 213 ALA SER LEU ARG SER ASN ALA GLU ALA ASN LYS GLU ASP SEQRES 15 A 213 THR MET THR VAL SER LEU PRO GLY PRO ILE LEU LEU LEU SEQRES 16 A 213 SER ASP VAL SER SER SER LYS GLY VAL ASP LEU GLU HIS SEQRES 17 A 213 HIS HIS HIS HIS HIS HET ACT A 701 7 HET ACT A 702 7 HET ACT A 703 7 HETNAM ACT ACETATE ION FORMUL 2 ACT 3(C2 H3 O2 1-) FORMUL 5 HOH *71(H2 O) HELIX 1 AA1 ARG A 503 TYR A 507 5 5 HELIX 2 AA2 HIS A 579 GLY A 581 5 3 HELIX 3 AA3 SER A 620 SER A 624 5 5 SHEET 1 AA1 4 VAL A 487 TYR A 493 0 SHEET 2 AA1 4 ILE A 517 LEU A 524 -1 O LEU A 524 N VAL A 487 SHEET 3 AA1 4 TYR A 583 THR A 590 -1 O PHE A 586 N MET A 519 SHEET 4 AA1 4 TYR A 566 PHE A 570 -1 N THR A 569 O ASP A 587 SHEET 1 AA2 6 LEU A 509 TYR A 512 0 SHEET 2 AA2 6 ILE A 651 LEU A 654 1 O LEU A 652 N LEU A 509 SHEET 3 AA2 6 SER A 602 CYS A 613 -1 N SER A 602 O LEU A 653 SHEET 4 AA2 6 LYS A 532 THR A 541 -1 N ASP A 537 O SER A 609 SHEET 5 AA2 6 GLN A 551 MET A 556 -1 O ILE A 554 N CYS A 538 SHEET 6 AA2 6 CYS A 559 GLU A 560 -1 O CYS A 559 N MET A 556 SHEET 1 AA3 4 LEU A 509 TYR A 512 0 SHEET 2 AA3 4 ILE A 651 LEU A 654 1 O LEU A 652 N LEU A 509 SHEET 3 AA3 4 SER A 602 CYS A 613 -1 N SER A 602 O LEU A 653 SHEET 4 AA3 4 MET A 643 SER A 646 -1 O VAL A 645 N CYS A 608 SSBOND 1 CYS A 538 CYS A 608 1555 1555 2.04 SSBOND 2 CYS A 559 CYS A 627 1555 1555 2.04 SSBOND 3 CYS A 613 CYS A 623 1555 1555 2.03 CISPEP 1 TYR A 507 PRO A 508 0 -4.22 CISPEP 2 ALA A 549 PRO A 550 0 3.86 CISPEP 3 CYS A 627 PRO A 628 0 1.10 SITE 1 AC1 5 ASP A 536 ASP A 537 SER A 609 THR A 642 SITE 2 AC1 5 ACT A 703 SITE 1 AC2 3 ASP A 505 THR A 644 HOH A 805 SITE 1 AC3 6 ASP A 537 TRP A 539 GLN A 551 GLN A 553 SITE 2 AC3 6 ACT A 701 HOH A 808 CRYST1 105.210 105.210 40.550 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009505 0.005488 0.000000 0.00000 SCALE2 0.000000 0.010975 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024661 0.00000