HEADER HYDROLASE ACTIVATOR 16-JUN-15 5C2K TITLE CRYSTAL STRUCTURE OF THE FUSION PROTEIN LINKED BY RHOA AND THE GAP TITLE 2 DOMAIN OF MGCRACGAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSFORMING PROTEIN RHOA,RAC GTPASE-ACTIVATING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GAP DOMAIN, UNP RESIDUES 346-546; COMPND 5 SYNONYM: MGCRACGAP; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RHOA, RACGAP1; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCR2.1 KEYWDS GTPASE ACTIVATION, FUSION PROTEIN, SMALL G PROTEIN, HYDROLASE KEYWDS 2 ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR K.MURAYAMA,M.KATO-MURAYAMA,T.HOSAKA,T.KITAMURA,S.YOKOYAMA,M.SHIROUZU REVDAT 3 08-NOV-23 5C2K 1 LINK REVDAT 2 19-FEB-20 5C2K 1 REMARK REVDAT 1 22-JUN-16 5C2K 0 JRNL AUTH K.MURAYAMA,M.KATO-MURAYAMA,T.HOSAKA,T.KAWASHIMA,T.KITAMURA, JRNL AUTH 2 S.YOKOYAMA,M.SHIROUZU JRNL TITL STRUCTURAL BASIS OF G-PROTEIN TARGET ALTERNATION OF JRNL TITL 2 MGCRACGAP BY PHOSPHOLYLATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 975869.730 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 73566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3754 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.51 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10680 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 594 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3024 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 609 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.27000 REMARK 3 B22 (A**2) : -2.73000 REMARK 3 B33 (A**2) : -3.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.62000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.15 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.17 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.14 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.910 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.530 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.970 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.940 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 59.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR/PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR/WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR/ION.PARAM REMARK 3 PARAMETER FILE 4 : GDP.PARAM REMARK 3 PARAMETER FILE 5 : AF3.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR/PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR/WATER.TOP REMARK 3 TOPOLOGY FILE 3 : CNS_TOPPAR/ION.TOP REMARK 3 TOPOLOGY FILE 4 : GDP.TOP REMARK 3 TOPOLOGY FILE 5 : AF3.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5C2K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210608. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73586 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.47000 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2OVJ , 1TX4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, BIS-TRIS, PH 5.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.52050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 SER A -5 REMARK 465 SER A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 SER A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 LYS A 186 REMARK 465 LYS A 187 REMARK 465 SER A 188 REMARK 465 GLY A 189 REMARK 465 CYS A 190 REMARK 465 LEU A 191 REMARK 465 VAL A 192 REMARK 465 LEU A 193 REMARK 465 SER A 194 REMARK 465 GLY A 195 REMARK 465 SER A 196 REMARK 465 SER A 197 REMARK 465 GLY A 198 REMARK 465 SER A 199 REMARK 465 SER A 200 REMARK 465 GLY A 201 REMARK 465 SER A 202 REMARK 465 SER A 203 REMARK 465 GLY A 204 REMARK 465 SER A 205 REMARK 465 SER A 206 REMARK 465 GLY A 207 REMARK 465 ILE A 208 REMARK 465 GLY A 209 REMARK 465 GLU A 408 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 AL AF3 A 502 O1B GDP A 503 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 38 -76.70 -104.16 REMARK 500 LYS A 98 -55.68 -123.57 REMARK 500 LYS A 164 -4.17 77.25 REMARK 500 TYR A 246 -14.19 77.52 REMARK 500 LYS A 266 -26.17 78.69 REMARK 500 THR A 297 155.95 74.55 REMARK 500 ALA A 368 -134.88 54.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1202 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A1203 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A1204 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A1205 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A1206 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A1207 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1208 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1209 DISTANCE = 6.52 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 19 OG1 REMARK 620 2 THR A 37 OG1 81.1 REMARK 620 3 GDP A 503 O2B 92.2 171.7 REMARK 620 4 HOH A 695 O 91.2 90.7 94.3 REMARK 620 5 HOH A 753 O 90.0 87.0 88.2 177.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AF3 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5C2J RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE IS BASED ON GENBANK BAA90247. DBREF 5C2K A 1 193 UNP P61586 RHOA_HUMAN 1 193 DBREF 5C2K A 208 408 UNP Q9H0H5 RGAP1_HUMAN 346 546 SEQADV 5C2K GLY A -6 UNP P61586 EXPRESSION TAG SEQADV 5C2K SER A -5 UNP P61586 EXPRESSION TAG SEQADV 5C2K SER A -4 UNP P61586 EXPRESSION TAG SEQADV 5C2K GLY A -3 UNP P61586 EXPRESSION TAG SEQADV 5C2K SER A -2 UNP P61586 EXPRESSION TAG SEQADV 5C2K SER A -1 UNP P61586 EXPRESSION TAG SEQADV 5C2K GLY A 0 UNP P61586 EXPRESSION TAG SEQADV 5C2K SER A 194 UNP P61586 LINKER SEQADV 5C2K GLY A 195 UNP P61586 LINKER SEQADV 5C2K SER A 196 UNP P61586 LINKER SEQADV 5C2K SER A 197 UNP P61586 LINKER SEQADV 5C2K GLY A 198 UNP P61586 LINKER SEQADV 5C2K SER A 199 UNP P61586 LINKER SEQADV 5C2K SER A 200 UNP P61586 LINKER SEQADV 5C2K GLY A 201 UNP P61586 LINKER SEQADV 5C2K SER A 202 UNP P61586 LINKER SEQADV 5C2K SER A 203 UNP P61586 LINKER SEQADV 5C2K GLY A 204 UNP P61586 LINKER SEQADV 5C2K SER A 205 UNP P61586 LINKER SEQADV 5C2K SER A 206 UNP P61586 LINKER SEQADV 5C2K GLY A 207 UNP P61586 LINKER SEQADV 5C2K ASP A 249 UNP Q9H0H5 SER 387 ENGINEERED MUTATION SEQADV 5C2K SER A 380 UNP Q9H0H5 LEU 518 SEE SEQUENCE DETAILS SEQRES 1 A 415 GLY SER SER GLY SER SER GLY MET ALA ALA ILE ARG LYS SEQRES 2 A 415 LYS LEU VAL ILE VAL GLY ASP GLY ALA CYS GLY LYS THR SEQRES 3 A 415 CYS LEU LEU ILE VAL PHE SER LYS ASP GLN PHE PRO GLU SEQRES 4 A 415 VAL TYR VAL PRO THR VAL PHE GLU ASN TYR VAL ALA ASP SEQRES 5 A 415 ILE GLU VAL ASP GLY LYS GLN VAL GLU LEU ALA LEU TRP SEQRES 6 A 415 ASP THR ALA GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO SEQRES 7 A 415 LEU SER TYR PRO ASP THR ASP VAL ILE LEU MET CYS PHE SEQRES 8 A 415 SER ILE ASP SER PRO ASP SER LEU GLU ASN ILE PRO GLU SEQRES 9 A 415 LYS TRP THR PRO GLU VAL LYS HIS PHE CYS PRO ASN VAL SEQRES 10 A 415 PRO ILE ILE LEU VAL GLY ASN LYS LYS ASP LEU ARG ASN SEQRES 11 A 415 ASP GLU HIS THR ARG ARG GLU LEU ALA LYS MET LYS GLN SEQRES 12 A 415 GLU PRO VAL LYS PRO GLU GLU GLY ARG ASP MET ALA ASN SEQRES 13 A 415 ARG ILE GLY ALA PHE GLY TYR MET GLU CYS SER ALA LYS SEQRES 14 A 415 THR LYS ASP GLY VAL ARG GLU VAL PHE GLU MET ALA THR SEQRES 15 A 415 ARG ALA ALA LEU GLN ALA ARG ARG GLY LYS LYS LYS SER SEQRES 16 A 415 GLY CYS LEU VAL LEU SER GLY SER SER GLY SER SER GLY SEQRES 17 A 415 SER SER GLY SER SER GLY ILE GLY GLU GLY MET LEU ALA SEQRES 18 A 415 ASP PHE VAL SER GLN THR SER PRO MET ILE PRO SER ILE SEQRES 19 A 415 VAL VAL HIS CYS VAL ASN GLU ILE GLU GLN ARG GLY LEU SEQRES 20 A 415 THR GLU THR GLY LEU TYR ARG ILE ASP GLY CYS ASP ARG SEQRES 21 A 415 THR VAL LYS GLU LEU LYS GLU LYS PHE LEU ARG VAL LYS SEQRES 22 A 415 THR VAL PRO LEU LEU SER LYS VAL ASP ASP ILE HIS ALA SEQRES 23 A 415 ILE CYS SER LEU LEU LYS ASP PHE LEU ARG ASN LEU LYS SEQRES 24 A 415 GLU PRO LEU LEU THR PHE ARG LEU ASN ARG ALA PHE MET SEQRES 25 A 415 GLU ALA ALA GLU ILE THR ASP GLU ASP ASN SER ILE ALA SEQRES 26 A 415 ALA MET TYR GLN ALA VAL GLY GLU LEU PRO GLN ALA ASN SEQRES 27 A 415 ARG ASP THR LEU ALA PHE LEU MET ILE HIS LEU GLN ARG SEQRES 28 A 415 VAL ALA GLN SER PRO HIS THR LYS MET ASP VAL ALA ASN SEQRES 29 A 415 LEU ALA LYS VAL PHE GLY PRO THR ILE VAL ALA HIS ALA SEQRES 30 A 415 VAL PRO ASN PRO ASP PRO VAL THR MET SER GLN ASP ILE SEQRES 31 A 415 LYS ARG GLN PRO LYS VAL VAL GLU ARG LEU LEU SER LEU SEQRES 32 A 415 PRO LEU GLU TYR TRP SER GLN PHE MET MET VAL GLU HET MG A 501 1 HET AF3 A 502 4 HET GDP A 503 28 HETNAM MG MAGNESIUM ION HETNAM AF3 ALUMINUM FLUORIDE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 2 MG MG 2+ FORMUL 3 AF3 AL F3 FORMUL 4 GDP C10 H15 N5 O11 P2 FORMUL 5 HOH *609(H2 O) HELIX 1 AA1 GLY A 17 ASP A 28 1 12 HELIX 2 AA2 GLN A 63 ASP A 67 5 5 HELIX 3 AA3 LEU A 69 TYR A 74 5 6 HELIX 4 AA4 SER A 88 LYS A 98 1 11 HELIX 5 AA5 LYS A 98 CYS A 107 1 10 HELIX 6 AA6 LYS A 118 ARG A 122 5 5 HELIX 7 AA7 ASP A 124 LYS A 133 1 10 HELIX 8 AA8 LYS A 140 GLY A 152 1 13 HELIX 9 AA9 GLY A 166 ARG A 183 1 18 HELIX 10 AB1 MET A 212 PHE A 216 5 5 HELIX 11 AB2 PRO A 225 GLY A 239 1 15 HELIX 12 AB3 CYS A 251 LYS A 266 1 16 HELIX 13 AB4 LEU A 270 VAL A 274 5 5 HELIX 14 AB5 ASP A 276 ASN A 290 1 15 HELIX 15 AB6 LEU A 300 ILE A 310 1 11 HELIX 16 AB7 ASP A 312 LEU A 327 1 16 HELIX 17 AB8 PRO A 328 SER A 348 1 21 HELIX 18 AB9 ASP A 354 VAL A 367 1 14 HELIX 19 AC1 ASP A 375 ILE A 383 1 9 HELIX 20 AC2 LYS A 384 SER A 395 1 12 HELIX 21 AC3 PRO A 397 PHE A 404 1 8 SHEET 1 AA1 6 PHE A 39 VAL A 48 0 SHEET 2 AA1 6 LYS A 51 THR A 60 -1 O LEU A 55 N ALA A 44 SHEET 3 AA1 6 ILE A 4 GLY A 12 1 N ILE A 4 O GLU A 54 SHEET 4 AA1 6 VAL A 79 SER A 85 1 O CYS A 83 N VAL A 11 SHEET 5 AA1 6 ILE A 112 ASN A 117 1 O ASN A 117 N PHE A 84 SHEET 6 AA1 6 GLY A 155 GLU A 158 1 O MET A 157 N GLY A 116 LINK OG1 THR A 19 MG MG A 501 1555 1555 2.02 LINK OG1 THR A 37 MG MG A 501 1555 1555 2.14 LINK MG MG A 501 O2B GDP A 503 1555 1555 1.95 LINK MG MG A 501 O HOH A 695 1555 1555 2.08 LINK MG MG A 501 O HOH A 753 1555 1555 2.09 CISPEP 1 SER A 221 PRO A 222 0 -0.58 SITE 1 AC1 6 THR A 19 THR A 37 AF3 A 502 GDP A 503 SITE 2 AC1 6 HOH A 695 HOH A 753 SITE 1 AC2 13 GLY A 14 ALA A 15 LYS A 18 PRO A 36 SITE 2 AC2 13 THR A 37 GLY A 62 GLN A 63 ARG A 247 SITE 3 AC2 13 MG A 501 GDP A 503 HOH A 695 HOH A 697 SITE 4 AC2 13 HOH A 753 SITE 1 AC3 27 ALA A 15 CYS A 16 GLY A 17 LYS A 18 SITE 2 AC3 27 THR A 19 CYS A 20 PHE A 30 TYR A 34 SITE 3 AC3 27 LYS A 118 ASP A 120 LEU A 121 SER A 160 SITE 4 AC3 27 ALA A 161 LYS A 162 ARG A 247 MG A 501 SITE 5 AC3 27 AF3 A 502 HOH A 639 HOH A 695 HOH A 752 SITE 6 AC3 27 HOH A 753 HOH A 773 HOH A 799 HOH A 817 SITE 7 AC3 27 HOH A 834 HOH A 869 HOH A 911 CRYST1 44.491 77.041 62.253 90.00 108.53 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022476 0.000000 0.007534 0.00000 SCALE2 0.000000 0.012980 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016942 0.00000