HEADER LYASE 16-JUN-15 5C2X TITLE CRYSTAL STRUCTURE OF DEOXYRIBOSE-PHOSPHATE ALDOLASE FROM COLWELLIA TITLE 2 PSYCHRERYTHRAEA (TETRAGONAL FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEOXYRIBOSE-PHOSPHATE ALDOLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.2.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COLWELLIA PSYCHRERYTHRAEA; SOURCE 3 ORGANISM_TAXID: 28229; SOURCE 4 GENE: DEOC, CPS_1972; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS DERA, TIM BARREL, PSYCHROPHILIC, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.DICK,O.H.WEIERGRAEBER,J.PIETRUSZKA REVDAT 2 10-JAN-24 5C2X 1 ATOM REVDAT 1 03-FEB-16 5C2X 0 JRNL AUTH M.DICK,O.H.WEIERGRABER,T.CLASSEN,C.BISTERFELD,J.BRAMSKI, JRNL AUTH 2 H.GOHLKE,J.PIETRUSZKA JRNL TITL TRADING OFF STABILITY AGAINST ACTIVITY IN EXTREMOPHILIC JRNL TITL 2 ALDOLASES. JRNL REF SCI REP V. 6 17908 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 26783049 JRNL DOI 10.1038/SREP17908 REMARK 2 REMARK 2 RESOLUTION. 2.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 82.3 REMARK 3 NUMBER OF REFLECTIONS : 29929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1587 - 4.6803 0.76 2566 136 0.1587 0.1652 REMARK 3 2 4.6803 - 3.7154 0.79 2526 133 0.1176 0.1677 REMARK 3 3 3.7154 - 3.2459 0.81 2536 133 0.1432 0.1750 REMARK 3 4 3.2459 - 2.9491 0.82 2557 135 0.1592 0.2291 REMARK 3 5 2.9491 - 2.7378 0.83 2603 137 0.1659 0.1860 REMARK 3 6 2.7378 - 2.5764 0.83 2586 136 0.1744 0.2496 REMARK 3 7 2.5764 - 2.4474 0.84 2618 137 0.1858 0.2346 REMARK 3 8 2.4474 - 2.3408 0.85 2622 139 0.1951 0.2586 REMARK 3 9 2.3408 - 2.2507 0.85 2614 137 0.1916 0.2434 REMARK 3 10 2.2507 - 2.1730 0.86 2650 140 0.2091 0.2428 REMARK 3 11 2.1730 - 2.1051 0.83 2554 134 0.2365 0.2847 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3683 REMARK 3 ANGLE : 0.813 5011 REMARK 3 CHIRALITY : 0.030 614 REMARK 3 PLANARITY : 0.004 652 REMARK 3 DIHEDRAL : 11.015 1300 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 2:301 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6825 1.9870 14.1512 REMARK 3 T TENSOR REMARK 3 T11: 0.2599 T22: 0.2606 REMARK 3 T33: 0.1596 T12: -0.0192 REMARK 3 T13: -0.0055 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.8823 L22: 1.8882 REMARK 3 L33: 0.8050 L12: 0.2251 REMARK 3 L13: -0.2088 L23: -0.1149 REMARK 3 S TENSOR REMARK 3 S11: -0.0124 S12: -0.0434 S13: -0.0720 REMARK 3 S21: 0.0313 S22: 0.0257 S23: 0.0252 REMARK 3 S31: 0.0613 S32: -0.1263 S33: -0.0168 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND RESID 2:301 REMARK 3 ORIGIN FOR THE GROUP (A): 44.5250 13.3589 18.0876 REMARK 3 T TENSOR REMARK 3 T11: 0.2275 T22: 0.2138 REMARK 3 T33: 0.2105 T12: -0.0339 REMARK 3 T13: -0.0034 T23: 0.0300 REMARK 3 L TENSOR REMARK 3 L11: 2.9468 L22: 1.4537 REMARK 3 L33: 1.4469 L12: 0.1287 REMARK 3 L13: -0.9558 L23: -0.3327 REMARK 3 S TENSOR REMARK 3 S11: 0.0591 S12: -0.3077 S13: 0.0869 REMARK 3 S21: 0.0609 S22: -0.0868 S23: -0.1758 REMARK 3 S31: -0.1015 S32: 0.2224 S33: 0.0274 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5C2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210938. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.969 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29931 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.110 REMARK 200 RESOLUTION RANGE LOW (A) : 47.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.3 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.91000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1JCL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, LITHIUM SULFATE, TRIS REMARK 280 BUFFER, TRIETHANOLAMINE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.49000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.88000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.88000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.24500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.88000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.88000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.73500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.88000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.88000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.24500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.88000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.88000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.73500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.49000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 502 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 248 REMARK 465 SER A 249 REMARK 465 ASN A 250 REMARK 465 THR A 251 REMARK 465 LYS A 252 REMARK 465 SER A 253 REMARK 465 SER A 254 REMARK 465 SER A 255 REMARK 465 ASN A 256 REMARK 465 TYR A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 MET B 1 REMARK 465 LYS B 248 REMARK 465 SER B 249 REMARK 465 ASN B 250 REMARK 465 THR B 251 REMARK 465 LYS B 252 REMARK 465 SER B 253 REMARK 465 SER B 254 REMARK 465 SER B 255 REMARK 465 ASN B 256 REMARK 465 TYR B 257 REMARK 465 HIS B 258 REMARK 465 HIS B 259 REMARK 465 HIS B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 465 HIS B 263 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 58 CE NZ REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 LYS A 69 CE NZ REMARK 470 LYS A 145 CD CE NZ REMARK 470 LYS A 152 CD CE NZ REMARK 470 LYS A 171 CE NZ REMARK 470 LYS A 182 CE NZ REMARK 470 SER B 2 OG REMARK 470 ASP B 3 CG OD1 OD2 REMARK 470 LYS B 5 CE NZ REMARK 470 ARG B 34 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 LYS B 57 CE NZ REMARK 470 LYS B 61 CE NZ REMARK 470 GLN B 112 CG CD OE1 NE2 REMARK 470 LYS B 123 CE NZ REMARK 470 LYS B 134 CE NZ REMARK 470 LYS B 145 CG CD CE NZ REMARK 470 GLU B 148 CD OE1 OE2 REMARK 470 LYS B 152 CD CE NZ REMARK 470 LYS B 171 CE NZ REMARK 470 GLU B 179 CG CD OE1 OE2 REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 LYS B 189 CD CE NZ REMARK 470 ARG B 204 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 223 CD OE1 OE2 REMARK 470 ILE B 239 CG1 CG2 CD1 REMARK 470 ASP B 243 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 132 -38.66 -138.77 REMARK 500 GLU A 140 66.27 61.15 REMARK 500 LYS A 145 -72.97 65.24 REMARK 500 ASN A 175 -128.61 -113.96 REMARK 500 ASN A 192 105.40 -163.07 REMARK 500 SER A 235 -77.49 -118.48 REMARK 500 ASN B 132 -34.13 -130.50 REMARK 500 GLU B 140 70.79 56.99 REMARK 500 LYS B 145 -63.02 69.58 REMARK 500 ASN B 175 -132.46 -106.09 REMARK 500 ASN B 192 104.21 -163.04 REMARK 500 SER B 235 -74.97 -124.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 564 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 539 DISTANCE = 6.26 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO3 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LYS B 166 DBREF 5C2X A 1 257 UNP Q483R4 Q483R4_COLP3 1 257 DBREF 5C2X B 1 257 UNP Q483R4 Q483R4_COLP3 1 257 SEQADV 5C2X HIS A 258 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS A 259 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS A 260 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS A 261 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS A 262 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS A 263 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS B 258 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS B 259 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS B 260 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS B 261 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS B 262 UNP Q483R4 EXPRESSION TAG SEQADV 5C2X HIS B 263 UNP Q483R4 EXPRESSION TAG SEQRES 1 A 263 MET SER ASP ILE LYS ALA VAL ALA GLN ARG ALA LEU SER SEQRES 2 A 263 LEU MET ASP LEU THR SER LEU THR ASN THR GLU THR ASP SEQRES 3 A 263 GLN GLU ILE ILE ASP LEU CYS ARG GLN ALA LYS SER PRO SEQRES 4 A 263 ALA GLY GLU THR ALA ALA ILE CYS ILE PHE PRO ARG PHE SEQRES 5 A 263 ILE PRO VAL ALA LYS LYS ALA LEU LYS ALA GLN GLN THR SEQRES 6 A 263 PRO HIS ILE LYS ILE ALA THR VAL THR ASN PHE PRO GLN SEQRES 7 A 263 GLY ASN ASP ASP LEU ASP ILE ALA LEU ALA GLU THR ARG SEQRES 8 A 263 ALA ALA VAL ALA TYR GLY ALA ASP GLU VAL ASP LEU VAL SEQRES 9 A 263 PHE PRO TYR ARG ALA LEU ILE GLN GLY ASN GLU THR ILE SEQRES 10 A 263 GLY PHE ASP MET VAL LYS VAL CYS LYS GLN ALA CYS SER SEQRES 11 A 263 GLY ASN ALA LYS LEU LYS VAL ILE ILE GLU THR GLY GLU SEQRES 12 A 263 LEU LYS SER GLU GLU LEU ILE ARG LYS ALA SER GLU ILE SEQRES 13 A 263 ALA ILE ASN ALA GLY ALA ASP PHE ILE LYS THR SER THR SEQRES 14 A 263 GLY LYS VAL ALA ILE ASN ALA THR PRO GLU ALA ALA LYS SEQRES 15 A 263 VAL MET LEU THR VAL ILE LYS ASN LYS ASN THR ALA VAL SEQRES 16 A 263 GLY PHE LYS PRO ALA GLY GLY VAL ARG ASN ALA ASP ASP SEQRES 17 A 263 ALA ALA ILE TYR LEU ASP LEU ALA ASP ASN ILE LEU GLY SEQRES 18 A 263 ASN GLU TRP ALA ASP ALA ASN HIS PHE ARG PHE GLY ALA SEQRES 19 A 263 SER SER LEU LEU ILE SER LEU LEU ASP THR LEU GLY HIS SEQRES 20 A 263 LYS SER ASN THR LYS SER SER SER ASN TYR HIS HIS HIS SEQRES 21 A 263 HIS HIS HIS SEQRES 1 B 263 MET SER ASP ILE LYS ALA VAL ALA GLN ARG ALA LEU SER SEQRES 2 B 263 LEU MET ASP LEU THR SER LEU THR ASN THR GLU THR ASP SEQRES 3 B 263 GLN GLU ILE ILE ASP LEU CYS ARG GLN ALA LYS SER PRO SEQRES 4 B 263 ALA GLY GLU THR ALA ALA ILE CYS ILE PHE PRO ARG PHE SEQRES 5 B 263 ILE PRO VAL ALA LYS LYS ALA LEU LYS ALA GLN GLN THR SEQRES 6 B 263 PRO HIS ILE LYS ILE ALA THR VAL THR ASN PHE PRO GLN SEQRES 7 B 263 GLY ASN ASP ASP LEU ASP ILE ALA LEU ALA GLU THR ARG SEQRES 8 B 263 ALA ALA VAL ALA TYR GLY ALA ASP GLU VAL ASP LEU VAL SEQRES 9 B 263 PHE PRO TYR ARG ALA LEU ILE GLN GLY ASN GLU THR ILE SEQRES 10 B 263 GLY PHE ASP MET VAL LYS VAL CYS LYS GLN ALA CYS SER SEQRES 11 B 263 GLY ASN ALA LYS LEU LYS VAL ILE ILE GLU THR GLY GLU SEQRES 12 B 263 LEU LYS SER GLU GLU LEU ILE ARG LYS ALA SER GLU ILE SEQRES 13 B 263 ALA ILE ASN ALA GLY ALA ASP PHE ILE LYS THR SER THR SEQRES 14 B 263 GLY LYS VAL ALA ILE ASN ALA THR PRO GLU ALA ALA LYS SEQRES 15 B 263 VAL MET LEU THR VAL ILE LYS ASN LYS ASN THR ALA VAL SEQRES 16 B 263 GLY PHE LYS PRO ALA GLY GLY VAL ARG ASN ALA ASP ASP SEQRES 17 B 263 ALA ALA ILE TYR LEU ASP LEU ALA ASP ASN ILE LEU GLY SEQRES 18 B 263 ASN GLU TRP ALA ASP ALA ASN HIS PHE ARG PHE GLY ALA SEQRES 19 B 263 SER SER LEU LEU ILE SER LEU LEU ASP THR LEU GLY HIS SEQRES 20 B 263 LYS SER ASN THR LYS SER SER SER ASN TYR HIS HIS HIS SEQRES 21 B 263 HIS HIS HIS HET UNL A 301 6 HET SO4 A 302 5 HET UNL B 301 6 HET SO4 B 302 5 HET CO3 B 303 4 HETNAM UNL UNKNOWN LIGAND HETNAM SO4 SULFATE ION HETNAM CO3 CARBONATE ION FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 CO3 C O3 2- FORMUL 8 HOH *303(H2 O) HELIX 1 AA1 ASP A 3 LEU A 14 1 12 HELIX 2 AA2 THR A 25 ALA A 36 1 12 HELIX 3 AA3 PHE A 49 ARG A 51 5 3 HELIX 4 AA4 PHE A 52 GLN A 63 1 12 HELIX 5 AA5 ASP A 82 GLY A 97 1 16 HELIX 6 AA6 PRO A 106 GLN A 112 1 7 HELIX 7 AA7 GLU A 115 SER A 130 1 16 HELIX 8 AA8 GLU A 140 LYS A 145 1 6 HELIX 9 AA9 SER A 146 GLY A 161 1 16 HELIX 10 AB1 THR A 177 ASN A 192 1 16 HELIX 11 AB2 ASN A 205 GLY A 221 1 17 HELIX 12 AB3 SER A 236 LEU A 245 1 10 HELIX 13 AB4 ASP B 3 LEU B 14 1 12 HELIX 14 AB5 THR B 25 ALA B 36 1 12 HELIX 15 AB6 PHE B 49 ARG B 51 5 3 HELIX 16 AB7 PHE B 52 GLN B 63 1 12 HELIX 17 AB8 ASP B 82 GLY B 97 1 16 HELIX 18 AB9 PRO B 106 GLN B 112 1 7 HELIX 19 AC1 GLU B 115 SER B 130 1 16 HELIX 20 AC2 GLU B 140 LYS B 145 1 6 HELIX 21 AC3 SER B 146 GLY B 161 1 16 HELIX 22 AC4 THR B 177 ASN B 192 1 16 HELIX 23 AC5 ASN B 205 GLY B 221 1 17 HELIX 24 AC6 SER B 236 LEU B 245 1 10 SHEET 1 AA1 8 GLY A 196 LYS A 198 0 SHEET 2 AA1 8 PHE A 164 LYS A 166 1 N ILE A 165 O GLY A 196 SHEET 3 AA1 8 LYS A 134 ILE A 138 1 N VAL A 137 O LYS A 166 SHEET 4 AA1 8 GLU A 100 VAL A 104 1 N LEU A 103 O ILE A 138 SHEET 5 AA1 8 LYS A 69 THR A 74 1 N THR A 72 O ASP A 102 SHEET 6 AA1 8 ALA A 45 CYS A 47 1 N ILE A 46 O ALA A 71 SHEET 7 AA1 8 MET A 15 THR A 18 1 N LEU A 17 O ALA A 45 SHEET 8 AA1 8 PHE A 232 ALA A 234 1 O PHE A 232 N ASP A 16 SHEET 1 AA2 2 LYS A 37 SER A 38 0 SHEET 2 AA2 2 GLY A 41 GLU A 42 -1 O GLY A 41 N SER A 38 SHEET 1 AA3 8 GLY B 196 LYS B 198 0 SHEET 2 AA3 8 PHE B 164 LYS B 166 1 N ILE B 165 O GLY B 196 SHEET 3 AA3 8 LYS B 134 ILE B 138 1 N VAL B 137 O LYS B 166 SHEET 4 AA3 8 GLU B 100 VAL B 104 1 N LEU B 103 O ILE B 138 SHEET 5 AA3 8 LYS B 69 THR B 74 1 N THR B 72 O ASP B 102 SHEET 6 AA3 8 ALA B 45 CYS B 47 1 N ILE B 46 O ALA B 71 SHEET 7 AA3 8 MET B 15 THR B 18 1 N LEU B 17 O ALA B 45 SHEET 8 AA3 8 PHE B 232 ALA B 234 1 O PHE B 232 N ASP B 16 SHEET 1 AA4 2 LYS B 37 SER B 38 0 SHEET 2 AA4 2 GLY B 41 GLU B 42 -1 O GLY B 41 N SER B 38 LINK NZ LYS A 166 C1 UNL A 301 1555 1555 1.38 LINK NZ LYS B 166 C1 UNL B 301 1555 1555 1.38 CISPEP 1 PHE A 76 PRO A 77 0 -3.25 CISPEP 2 PHE B 76 PRO B 77 0 -2.32 SITE 1 AC1 7 GLY A 201 GLY A 202 ARG A 204 ALA A 234 SITE 2 AC1 7 SER A 235 HOH A 460 HOH A 490 SITE 1 AC2 5 LYS B 191 GLY B 202 ALA B 234 SER B 235 SITE 2 AC2 5 HOH B 414 SITE 1 AC3 4 ARG B 91 ALA B 128 HOH B 403 HOH B 461 SITE 1 AC4 9 ASP B 102 VAL B 137 ILE B 138 ILE B 139 SITE 2 AC4 9 ILE B 165 THR B 167 SER B 168 LYS B 198 SITE 3 AC4 9 ALA B 200 CRYST1 103.760 103.760 112.980 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009638 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009638 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008851 0.00000