data_5CBY # _entry.id 5CBY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CBY pdb_00005cby 10.2210/pdb5cby/pdb WWPDB D_1000211255 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-23 2 'Structure model' 1 1 2016-03-16 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2019-12-25 5 'Structure model' 1 4 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 5 'Structure model' '_database_2.pdbx_DOI' 6 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CBY _pdbx_database_status.recvd_initial_deposition_date 2015-07-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5CBX unspecified PDB . 5CBZ unspecified PDB . 5CC0 unspecified PDB . 5CC1 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hudson, W.H.' 1 'Ortlund, E.A.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 113 _citation.language ? _citation.page_first 326 _citation.page_last 331 _citation.title ;Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1518960113 _citation.pdbx_database_id_PubMed 26715749 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hudson, W.H.' 1 ? primary 'Kossmann, B.R.' 2 ? primary 'de Vera, I.M.' 3 ? primary 'Chuo, S.W.' 4 ? primary 'Weikum, E.R.' 5 ? primary 'Eick, G.N.' 6 ? primary 'Thornton, J.W.' 7 ? primary 'Ivanov, I.N.' 8 ? primary 'Kojetin, D.J.' 9 ? primary 'Ortlund, E.A.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AncGR2 DNA Binding Domain' 11769.648 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3') ; 5540.604 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3') ; 5466.553 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 5 water nat water 18.015 138 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GR,Nuclear receptor subfamily 3 group C member 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHHHHHHSSGVDLGTENLYFQSNAGPPPKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRR KNCPACRFRKCLQAGMNLEARKTKK ; ;MHHHHHHSSGVDLGTENLYFQSNAGPPPKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRR KNCPACRFRKCLQAGMNLEARKTKK ; A,B ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DG)(DA)(DA)(DC)(DA)(DG)(DA)(DG)(DT)(DG)(DT)(DT)(DC)(DT)(DG)' CCAGAACAGAGTGTTCTG C ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DA)(DG)(DA)(DA)(DC)(DA)(DC)(DT)(DC)(DT)(DG)(DT)(DT)(DC)(DT)(DG)' TCAGAACACTCTGTTCTG D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 ASN n 1 24 ALA n 1 25 GLY n 1 26 PRO n 1 27 PRO n 1 28 PRO n 1 29 LYS n 1 30 ILE n 1 31 CYS n 1 32 LEU n 1 33 VAL n 1 34 CYS n 1 35 SER n 1 36 ASP n 1 37 GLU n 1 38 ALA n 1 39 SER n 1 40 GLY n 1 41 CYS n 1 42 HIS n 1 43 TYR n 1 44 GLY n 1 45 VAL n 1 46 LEU n 1 47 THR n 1 48 CYS n 1 49 GLY n 1 50 SER n 1 51 CYS n 1 52 LYS n 1 53 VAL n 1 54 PHE n 1 55 PHE n 1 56 LYS n 1 57 ARG n 1 58 ALA n 1 59 VAL n 1 60 GLU n 1 61 GLY n 1 62 GLN n 1 63 HIS n 1 64 ASN n 1 65 TYR n 1 66 LEU n 1 67 CYS n 1 68 ALA n 1 69 GLY n 1 70 ARG n 1 71 ASN n 1 72 ASP n 1 73 CYS n 1 74 ILE n 1 75 ILE n 1 76 ASP n 1 77 LYS n 1 78 ILE n 1 79 ARG n 1 80 ARG n 1 81 LYS n 1 82 ASN n 1 83 CYS n 1 84 PRO n 1 85 ALA n 1 86 CYS n 1 87 ARG n 1 88 PHE n 1 89 ARG n 1 90 LYS n 1 91 CYS n 1 92 LEU n 1 93 GLN n 1 94 ALA n 1 95 GLY n 1 96 MET n 1 97 ASN n 1 98 LEU n 1 99 GLU n 1 100 ALA n 1 101 ARG n 1 102 LYS n 1 103 THR n 1 104 LYS n 1 105 LYS n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DA n 2 7 DC n 2 8 DA n 2 9 DG n 2 10 DA n 2 11 DG n 2 12 DT n 2 13 DG n 2 14 DT n 2 15 DT n 2 16 DC n 2 17 DT n 2 18 DG n 3 1 DT n 3 2 DC n 3 3 DA n 3 4 DG n 3 5 DA n 3 6 DA n 3 7 DC n 3 8 DA n 3 9 DC n 3 10 DT n 3 11 DC n 3 12 DT n 3 13 DG n 3 14 DT n 3 15 DT n 3 16 DC n 3 17 DT n 3 18 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 105 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name UNCLASSIFIED _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32644 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 18 'synthetic construct' ? 32630 ? 3 1 sample 1 18 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 391 ? ? ? A . n A 1 2 HIS 2 392 ? ? ? A . n A 1 3 HIS 3 393 ? ? ? A . n A 1 4 HIS 4 394 ? ? ? A . n A 1 5 HIS 5 395 ? ? ? A . n A 1 6 HIS 6 396 ? ? ? A . n A 1 7 HIS 7 397 ? ? ? A . n A 1 8 SER 8 398 ? ? ? A . n A 1 9 SER 9 399 ? ? ? A . n A 1 10 GLY 10 400 ? ? ? A . n A 1 11 VAL 11 401 ? ? ? A . n A 1 12 ASP 12 402 ? ? ? A . n A 1 13 LEU 13 403 ? ? ? A . n A 1 14 GLY 14 404 ? ? ? A . n A 1 15 THR 15 405 ? ? ? A . n A 1 16 GLU 16 406 ? ? ? A . n A 1 17 ASN 17 407 ? ? ? A . n A 1 18 LEU 18 408 ? ? ? A . n A 1 19 TYR 19 409 ? ? ? A . n A 1 20 PHE 20 410 ? ? ? A . n A 1 21 GLN 21 411 ? ? ? A . n A 1 22 SER 22 412 ? ? ? A . n A 1 23 ASN 23 413 ? ? ? A . n A 1 24 ALA 24 414 ? ? ? A . n A 1 25 GLY 25 415 ? ? ? A . n A 1 26 PRO 26 416 ? ? ? A . n A 1 27 PRO 27 417 417 PRO PRO A . n A 1 28 PRO 28 418 418 PRO PRO A . n A 1 29 LYS 29 419 419 LYS LYS A . n A 1 30 ILE 30 420 420 ILE ILE A . n A 1 31 CYS 31 421 421 CYS CYS A . n A 1 32 LEU 32 422 422 LEU LEU A . n A 1 33 VAL 33 423 423 VAL VAL A . n A 1 34 CYS 34 424 424 CYS CYS A . n A 1 35 SER 35 425 425 SER SER A . n A 1 36 ASP 36 426 426 ASP ASP A . n A 1 37 GLU 37 427 427 GLU GLU A . n A 1 38 ALA 38 428 428 ALA ALA A . n A 1 39 SER 39 429 429 SER SER A . n A 1 40 GLY 40 430 430 GLY GLY A . n A 1 41 CYS 41 431 431 CYS CYS A . n A 1 42 HIS 42 432 432 HIS HIS A . n A 1 43 TYR 43 433 433 TYR TYR A . n A 1 44 GLY 44 434 434 GLY GLY A . n A 1 45 VAL 45 435 435 VAL VAL A . n A 1 46 LEU 46 436 436 LEU LEU A . n A 1 47 THR 47 437 437 THR THR A . n A 1 48 CYS 48 438 438 CYS CYS A . n A 1 49 GLY 49 439 439 GLY GLY A . n A 1 50 SER 50 440 440 SER SER A . n A 1 51 CYS 51 441 441 CYS CYS A . n A 1 52 LYS 52 442 442 LYS LYS A . n A 1 53 VAL 53 443 443 VAL VAL A . n A 1 54 PHE 54 444 444 PHE PHE A . n A 1 55 PHE 55 445 445 PHE PHE A . n A 1 56 LYS 56 446 446 LYS LYS A . n A 1 57 ARG 57 447 447 ARG ARG A . n A 1 58 ALA 58 448 448 ALA ALA A . n A 1 59 VAL 59 449 449 VAL VAL A . n A 1 60 GLU 60 450 450 GLU GLU A . n A 1 61 GLY 61 451 451 GLY GLY A . n A 1 62 GLN 62 452 452 GLN GLN A . n A 1 63 HIS 63 453 453 HIS HIS A . n A 1 64 ASN 64 454 454 ASN ASN A . n A 1 65 TYR 65 455 455 TYR TYR A . n A 1 66 LEU 66 456 456 LEU LEU A . n A 1 67 CYS 67 457 457 CYS CYS A . n A 1 68 ALA 68 458 458 ALA ALA A . n A 1 69 GLY 69 459 459 GLY GLY A . n A 1 70 ARG 70 460 460 ARG ARG A . n A 1 71 ASN 71 461 461 ASN ASN A . n A 1 72 ASP 72 462 462 ASP ASP A . n A 1 73 CYS 73 463 463 CYS CYS A . n A 1 74 ILE 74 464 464 ILE ILE A . n A 1 75 ILE 75 465 465 ILE ILE A . n A 1 76 ASP 76 466 466 ASP ASP A . n A 1 77 LYS 77 467 467 LYS LYS A . n A 1 78 ILE 78 468 468 ILE ILE A . n A 1 79 ARG 79 469 469 ARG ARG A . n A 1 80 ARG 80 470 470 ARG ARG A . n A 1 81 LYS 81 471 471 LYS LYS A . n A 1 82 ASN 82 472 472 ASN ASN A . n A 1 83 CYS 83 473 473 CYS CYS A . n A 1 84 PRO 84 474 474 PRO PRO A . n A 1 85 ALA 85 475 475 ALA ALA A . n A 1 86 CYS 86 476 476 CYS CYS A . n A 1 87 ARG 87 477 477 ARG ARG A . n A 1 88 PHE 88 478 478 PHE PHE A . n A 1 89 ARG 89 479 479 ARG ARG A . n A 1 90 LYS 90 480 480 LYS LYS A . n A 1 91 CYS 91 481 481 CYS CYS A . n A 1 92 LEU 92 482 482 LEU LEU A . n A 1 93 GLN 93 483 483 GLN GLN A . n A 1 94 ALA 94 484 484 ALA ALA A . n A 1 95 GLY 95 485 485 GLY GLY A . n A 1 96 MET 96 486 486 MET MET A . n A 1 97 ASN 97 487 487 ASN ASN A . n A 1 98 LEU 98 488 488 LEU LEU A . n A 1 99 GLU 99 489 489 GLU GLU A . n A 1 100 ALA 100 490 490 ALA ALA A . n A 1 101 ARG 101 491 491 ARG ARG A . n A 1 102 LYS 102 492 492 LYS LYS A . n A 1 103 THR 103 493 ? ? ? A . n A 1 104 LYS 104 494 ? ? ? A . n A 1 105 LYS 105 495 ? ? ? A . n B 1 1 MET 1 391 ? ? ? B . n B 1 2 HIS 2 392 ? ? ? B . n B 1 3 HIS 3 393 ? ? ? B . n B 1 4 HIS 4 394 ? ? ? B . n B 1 5 HIS 5 395 ? ? ? B . n B 1 6 HIS 6 396 ? ? ? B . n B 1 7 HIS 7 397 ? ? ? B . n B 1 8 SER 8 398 ? ? ? B . n B 1 9 SER 9 399 ? ? ? B . n B 1 10 GLY 10 400 ? ? ? B . n B 1 11 VAL 11 401 ? ? ? B . n B 1 12 ASP 12 402 ? ? ? B . n B 1 13 LEU 13 403 ? ? ? B . n B 1 14 GLY 14 404 ? ? ? B . n B 1 15 THR 15 405 ? ? ? B . n B 1 16 GLU 16 406 ? ? ? B . n B 1 17 ASN 17 407 ? ? ? B . n B 1 18 LEU 18 408 ? ? ? B . n B 1 19 TYR 19 409 ? ? ? B . n B 1 20 PHE 20 410 ? ? ? B . n B 1 21 GLN 21 411 ? ? ? B . n B 1 22 SER 22 412 ? ? ? B . n B 1 23 ASN 23 413 ? ? ? B . n B 1 24 ALA 24 414 ? ? ? B . n B 1 25 GLY 25 415 ? ? ? B . n B 1 26 PRO 26 416 ? ? ? B . n B 1 27 PRO 27 417 ? ? ? B . n B 1 28 PRO 28 418 418 PRO PRO B . n B 1 29 LYS 29 419 419 LYS LYS B . n B 1 30 ILE 30 420 420 ILE ILE B . n B 1 31 CYS 31 421 421 CYS CYS B . n B 1 32 LEU 32 422 422 LEU LEU B . n B 1 33 VAL 33 423 423 VAL VAL B . n B 1 34 CYS 34 424 424 CYS CYS B . n B 1 35 SER 35 425 425 SER SER B . n B 1 36 ASP 36 426 426 ASP ASP B . n B 1 37 GLU 37 427 427 GLU GLU B . n B 1 38 ALA 38 428 428 ALA ALA B . n B 1 39 SER 39 429 429 SER SER B . n B 1 40 GLY 40 430 430 GLY GLY B . n B 1 41 CYS 41 431 431 CYS CYS B . n B 1 42 HIS 42 432 432 HIS HIS B . n B 1 43 TYR 43 433 433 TYR TYR B . n B 1 44 GLY 44 434 434 GLY GLY B . n B 1 45 VAL 45 435 435 VAL VAL B . n B 1 46 LEU 46 436 436 LEU LEU B . n B 1 47 THR 47 437 437 THR THR B . n B 1 48 CYS 48 438 438 CYS CYS B . n B 1 49 GLY 49 439 439 GLY GLY B . n B 1 50 SER 50 440 440 SER SER B . n B 1 51 CYS 51 441 441 CYS CYS B . n B 1 52 LYS 52 442 442 LYS LYS B . n B 1 53 VAL 53 443 443 VAL VAL B . n B 1 54 PHE 54 444 444 PHE PHE B . n B 1 55 PHE 55 445 445 PHE PHE B . n B 1 56 LYS 56 446 446 LYS LYS B . n B 1 57 ARG 57 447 447 ARG ARG B . n B 1 58 ALA 58 448 448 ALA ALA B . n B 1 59 VAL 59 449 449 VAL VAL B . n B 1 60 GLU 60 450 450 GLU GLU B . n B 1 61 GLY 61 451 451 GLY GLY B . n B 1 62 GLN 62 452 452 GLN GLN B . n B 1 63 HIS 63 453 453 HIS HIS B . n B 1 64 ASN 64 454 454 ASN ASN B . n B 1 65 TYR 65 455 455 TYR TYR B . n B 1 66 LEU 66 456 456 LEU LEU B . n B 1 67 CYS 67 457 457 CYS CYS B . n B 1 68 ALA 68 458 458 ALA ALA B . n B 1 69 GLY 69 459 459 GLY GLY B . n B 1 70 ARG 70 460 460 ARG ARG B . n B 1 71 ASN 71 461 461 ASN ASN B . n B 1 72 ASP 72 462 462 ASP ASP B . n B 1 73 CYS 73 463 463 CYS CYS B . n B 1 74 ILE 74 464 464 ILE ILE B . n B 1 75 ILE 75 465 465 ILE ILE B . n B 1 76 ASP 76 466 466 ASP ASP B . n B 1 77 LYS 77 467 467 LYS LYS B . n B 1 78 ILE 78 468 468 ILE ILE B . n B 1 79 ARG 79 469 469 ARG ARG B . n B 1 80 ARG 80 470 470 ARG ARG B . n B 1 81 LYS 81 471 471 LYS LYS B . n B 1 82 ASN 82 472 472 ASN ASN B . n B 1 83 CYS 83 473 473 CYS CYS B . n B 1 84 PRO 84 474 474 PRO PRO B . n B 1 85 ALA 85 475 475 ALA ALA B . n B 1 86 CYS 86 476 476 CYS CYS B . n B 1 87 ARG 87 477 477 ARG ARG B . n B 1 88 PHE 88 478 478 PHE PHE B . n B 1 89 ARG 89 479 479 ARG ARG B . n B 1 90 LYS 90 480 480 LYS LYS B . n B 1 91 CYS 91 481 481 CYS CYS B . n B 1 92 LEU 92 482 482 LEU LEU B . n B 1 93 GLN 93 483 483 GLN GLN B . n B 1 94 ALA 94 484 484 ALA ALA B . n B 1 95 GLY 95 485 485 GLY GLY B . n B 1 96 MET 96 486 486 MET MET B . n B 1 97 ASN 97 487 487 ASN ASN B . n B 1 98 LEU 98 488 488 LEU LEU B . n B 1 99 GLU 99 489 489 GLU GLU B . n B 1 100 ALA 100 490 ? ? ? B . n B 1 101 ARG 101 491 ? ? ? B . n B 1 102 LYS 102 492 ? ? ? B . n B 1 103 THR 103 493 ? ? ? B . n B 1 104 LYS 104 494 ? ? ? B . n B 1 105 LYS 105 495 ? ? ? B . n C 2 1 DC 1 1 1 DC DC C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DA 3 3 3 DA DA C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DA 6 6 6 DA DA C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DA 8 8 8 DA DA C . n C 2 9 DG 9 9 9 DG DG C . n C 2 10 DA 10 10 10 DA DA C . n C 2 11 DG 11 11 11 DG DG C . n C 2 12 DT 12 12 12 DT DT C . n C 2 13 DG 13 13 13 DG DG C . n C 2 14 DT 14 14 14 DT DT C . n C 2 15 DT 15 15 15 DT DT C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DT 17 17 17 DT DT C . n C 2 18 DG 18 18 18 DG DG C . n D 3 1 DT 1 1 1 DT DT D . n D 3 2 DC 2 2 2 DC DC D . n D 3 3 DA 3 3 3 DA DA D . n D 3 4 DG 4 4 4 DG DG D . n D 3 5 DA 5 5 5 DA DA D . n D 3 6 DA 6 6 6 DA DA D . n D 3 7 DC 7 7 7 DC DC D . n D 3 8 DA 8 8 8 DA DA D . n D 3 9 DC 9 9 9 DC DC D . n D 3 10 DT 10 10 10 DT DT D . n D 3 11 DC 11 11 11 DC DC D . n D 3 12 DT 12 12 12 DT DT D . n D 3 13 DG 13 13 13 DG DG D . n D 3 14 DT 14 14 14 DT DT D . n D 3 15 DT 15 15 15 DT DT D . n D 3 16 DC 16 16 16 DC DC D . n D 3 17 DT 17 17 17 DT DT D . n D 3 18 DG 18 18 18 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 501 507 ZN ZN A . F 4 ZN 1 502 508 ZN ZN A . G 4 ZN 1 501 507 ZN ZN B . H 4 ZN 1 502 508 ZN ZN B . I 5 HOH 1 601 105 HOH HOH A . I 5 HOH 2 602 119 HOH HOH A . I 5 HOH 3 603 43 HOH HOH A . I 5 HOH 4 604 73 HOH HOH A . I 5 HOH 5 605 39 HOH HOH A . I 5 HOH 6 606 67 HOH HOH A . I 5 HOH 7 607 14 HOH HOH A . I 5 HOH 8 608 5 HOH HOH A . I 5 HOH 9 609 89 HOH HOH A . I 5 HOH 10 610 55 HOH HOH A . I 5 HOH 11 611 9 HOH HOH A . I 5 HOH 12 612 92 HOH HOH A . I 5 HOH 13 613 44 HOH HOH A . I 5 HOH 14 614 3 HOH HOH A . I 5 HOH 15 615 103 HOH HOH A . I 5 HOH 16 616 16 HOH HOH A . I 5 HOH 17 617 46 HOH HOH A . I 5 HOH 18 618 81 HOH HOH A . I 5 HOH 19 619 31 HOH HOH A . I 5 HOH 20 620 71 HOH HOH A . I 5 HOH 21 621 32 HOH HOH A . I 5 HOH 22 622 45 HOH HOH A . I 5 HOH 23 623 1 HOH HOH A . I 5 HOH 24 624 57 HOH HOH A . I 5 HOH 25 625 118 HOH HOH A . I 5 HOH 26 626 75 HOH HOH A . I 5 HOH 27 627 120 HOH HOH A . I 5 HOH 28 628 36 HOH HOH A . I 5 HOH 29 629 70 HOH HOH A . I 5 HOH 30 630 11 HOH HOH A . I 5 HOH 31 631 86 HOH HOH A . I 5 HOH 32 632 63 HOH HOH A . I 5 HOH 33 633 20 HOH HOH A . I 5 HOH 34 634 130 HOH HOH A . I 5 HOH 35 635 10 HOH HOH A . I 5 HOH 36 636 24 HOH HOH A . I 5 HOH 37 637 6 HOH HOH A . I 5 HOH 38 638 2 HOH HOH A . I 5 HOH 39 639 33 HOH HOH A . I 5 HOH 40 640 68 HOH HOH A . I 5 HOH 41 641 101 HOH HOH A . I 5 HOH 42 642 42 HOH HOH A . I 5 HOH 43 643 79 HOH HOH A . I 5 HOH 44 644 50 HOH HOH A . I 5 HOH 45 645 77 HOH HOH A . I 5 HOH 46 646 21 HOH HOH A . I 5 HOH 47 647 48 HOH HOH A . I 5 HOH 48 648 84 HOH HOH A . I 5 HOH 49 649 29 HOH HOH A . I 5 HOH 50 650 100 HOH HOH A . I 5 HOH 51 651 138 HOH HOH A . I 5 HOH 52 652 117 HOH HOH A . I 5 HOH 53 653 59 HOH HOH A . I 5 HOH 54 654 28 HOH HOH A . I 5 HOH 55 655 80 HOH HOH A . I 5 HOH 56 656 125 HOH HOH A . I 5 HOH 57 657 40 HOH HOH A . I 5 HOH 58 658 22 HOH HOH A . I 5 HOH 59 659 99 HOH HOH A . I 5 HOH 60 660 96 HOH HOH A . I 5 HOH 61 661 106 HOH HOH A . I 5 HOH 62 662 52 HOH HOH A . I 5 HOH 63 663 107 HOH HOH A . J 5 HOH 1 601 15 HOH HOH B . J 5 HOH 2 602 17 HOH HOH B . J 5 HOH 3 603 133 HOH HOH B . J 5 HOH 4 604 82 HOH HOH B . J 5 HOH 5 605 135 HOH HOH B . J 5 HOH 6 606 47 HOH HOH B . J 5 HOH 7 607 83 HOH HOH B . J 5 HOH 8 608 49 HOH HOH B . J 5 HOH 9 609 25 HOH HOH B . J 5 HOH 10 610 136 HOH HOH B . J 5 HOH 11 611 121 HOH HOH B . J 5 HOH 12 612 65 HOH HOH B . J 5 HOH 13 613 27 HOH HOH B . J 5 HOH 14 614 88 HOH HOH B . J 5 HOH 15 615 23 HOH HOH B . J 5 HOH 16 616 102 HOH HOH B . J 5 HOH 17 617 66 HOH HOH B . J 5 HOH 18 618 137 HOH HOH B . J 5 HOH 19 619 72 HOH HOH B . J 5 HOH 20 620 8 HOH HOH B . J 5 HOH 21 621 91 HOH HOH B . J 5 HOH 22 622 7 HOH HOH B . J 5 HOH 23 623 93 HOH HOH B . J 5 HOH 24 624 35 HOH HOH B . J 5 HOH 25 625 108 HOH HOH B . J 5 HOH 26 626 64 HOH HOH B . J 5 HOH 27 627 12 HOH HOH B . J 5 HOH 28 628 139 HOH HOH B . J 5 HOH 29 629 98 HOH HOH B . J 5 HOH 30 630 109 HOH HOH B . J 5 HOH 31 631 110 HOH HOH B . J 5 HOH 32 632 76 HOH HOH B . J 5 HOH 33 633 51 HOH HOH B . K 5 HOH 1 101 90 HOH HOH C . K 5 HOH 2 102 115 HOH HOH C . K 5 HOH 3 103 124 HOH HOH C . K 5 HOH 4 104 113 HOH HOH C . K 5 HOH 5 105 94 HOH HOH C . K 5 HOH 6 106 38 HOH HOH C . K 5 HOH 7 107 114 HOH HOH C . K 5 HOH 8 108 34 HOH HOH C . K 5 HOH 9 109 62 HOH HOH C . K 5 HOH 10 110 134 HOH HOH C . K 5 HOH 11 111 56 HOH HOH C . K 5 HOH 12 112 127 HOH HOH C . K 5 HOH 13 113 111 HOH HOH C . K 5 HOH 14 114 126 HOH HOH C . K 5 HOH 15 115 131 HOH HOH C . K 5 HOH 16 116 122 HOH HOH C . L 5 HOH 1 101 74 HOH HOH D . L 5 HOH 2 102 58 HOH HOH D . L 5 HOH 3 103 104 HOH HOH D . L 5 HOH 4 104 60 HOH HOH D . L 5 HOH 5 105 69 HOH HOH D . L 5 HOH 6 106 13 HOH HOH D . L 5 HOH 7 107 18 HOH HOH D . L 5 HOH 8 108 53 HOH HOH D . L 5 HOH 9 109 19 HOH HOH D . L 5 HOH 10 110 4 HOH HOH D . L 5 HOH 11 111 129 HOH HOH D . L 5 HOH 12 112 78 HOH HOH D . L 5 HOH 13 113 61 HOH HOH D . L 5 HOH 14 114 95 HOH HOH D . L 5 HOH 15 115 97 HOH HOH D . L 5 HOH 16 116 37 HOH HOH D . L 5 HOH 17 117 26 HOH HOH D . L 5 HOH 18 118 30 HOH HOH D . L 5 HOH 19 119 41 HOH HOH D . L 5 HOH 20 120 54 HOH HOH D . L 5 HOH 21 121 132 HOH HOH D . L 5 HOH 22 122 87 HOH HOH D . L 5 HOH 23 123 128 HOH HOH D . L 5 HOH 24 124 123 HOH HOH D . L 5 HOH 25 125 116 HOH HOH D . L 5 HOH 26 126 112 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? SERGUI ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.entry_id 5CBY _cell.length_a 131.644 _cell.length_b 38.798 _cell.length_c 98.250 _cell.angle_alpha 90.00 _cell.angle_beta 119.65 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CBY _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CBY _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES (pH 7.5) and 15% PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-10-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5CBY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27141 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 91.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5CBY _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27116 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.743 _refine.ls_d_res_high 1.997 _refine.ls_percent_reflns_obs 90.95 _refine.ls_R_factor_obs 0.1847 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1821 _refine.ls_R_factor_R_free 0.2170 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.37 _refine.ls_number_reflns_R_free 1999 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.20 _refine.pdbx_overall_phase_error 21.61 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1140 _refine_hist.pdbx_number_atoms_nucleic_acid 730 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 138 _refine_hist.number_atoms_total 2012 _refine_hist.d_res_high 1.997 _refine_hist.d_res_low 36.743 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 1999 'X-RAY DIFFRACTION' ? f_angle_d 1.202 ? ? 2837 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 23.862 ? ? 802 'X-RAY DIFFRACTION' ? f_chiral_restr 0.052 ? ? 307 'X-RAY DIFFRACTION' ? f_plane_restr 0.009 ? ? 239 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.9967 2.0466 1108 0.2339 57.00 0.2540 . . 89 . . 'X-RAY DIFFRACTION' . 2.0466 2.1020 1342 0.2114 69.00 0.2136 . . 106 . . 'X-RAY DIFFRACTION' . 2.1020 2.1638 1541 0.1897 78.00 0.2128 . . 123 . . 'X-RAY DIFFRACTION' . 2.1638 2.2336 1653 0.1950 85.00 0.2244 . . 131 . . 'X-RAY DIFFRACTION' . 2.2336 2.3135 1774 0.1943 92.00 0.2439 . . 142 . . 'X-RAY DIFFRACTION' . 2.3135 2.4061 1894 0.1933 96.00 0.2062 . . 150 . . 'X-RAY DIFFRACTION' . 2.4061 2.5155 1905 0.1958 98.00 0.2346 . . 152 . . 'X-RAY DIFFRACTION' . 2.5155 2.6481 1960 0.1985 99.00 0.2548 . . 155 . . 'X-RAY DIFFRACTION' . 2.6481 2.8140 1952 0.1965 100.00 0.2599 . . 155 . . 'X-RAY DIFFRACTION' . 2.8140 3.0312 1979 0.1998 100.00 0.2233 . . 158 . . 'X-RAY DIFFRACTION' . 3.0312 3.3360 1943 0.1896 99.00 0.2362 . . 155 . . 'X-RAY DIFFRACTION' . 3.3360 3.8183 2001 0.1852 100.00 0.2196 . . 160 . . 'X-RAY DIFFRACTION' . 3.8183 4.8090 2003 0.1565 100.00 0.1952 . . 159 . . 'X-RAY DIFFRACTION' . 4.8090 36.7489 2062 0.1568 100.00 0.1816 . . 164 . . # _struct.entry_id 5CBY _struct.title 'AncGR2 DNA Binding Domain - (+)GRE Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CBY _struct_keywords.text 'DNA binding proteins, dna binding protein-dna complex' _struct_keywords.pdbx_keywords 'dna binding protein/dna' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5CBY 5CBY ? 1 ? 1 2 PDB 5CBY 5CBY ? 2 ? 1 3 PDB 5CBY 5CBY ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5CBY A 1 ? 105 ? 5CBY 391 ? 495 ? 391 495 2 1 5CBY B 1 ? 105 ? 5CBY 391 ? 495 ? 391 495 3 2 5CBY C 1 ? 18 ? 5CBY 1 ? 18 ? 1 18 4 3 5CBY D 1 ? 18 ? 5CBY 1 ? 18 ? 1 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5180 ? 1 MORE -32 ? 1 'SSA (A^2)' 13000 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 48 ? GLY A 61 ? CYS A 438 GLY A 451 1 ? 14 HELX_P HELX_P2 AA2 CYS A 83 ? GLY A 95 ? CYS A 473 GLY A 485 1 ? 13 HELX_P HELX_P3 AA3 CYS B 48 ? GLY B 61 ? CYS B 438 GLY B 451 1 ? 14 HELX_P HELX_P4 AA4 ILE B 78 ? ASN B 82 ? ILE B 468 ASN B 472 5 ? 5 HELX_P HELX_P5 AA5 CYS B 83 ? ALA B 94 ? CYS B 473 ALA B 484 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 31 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 421 A ZN 501 1_555 ? ? ? ? ? ? ? 2.306 ? ? metalc2 metalc ? ? A CYS 34 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 424 A ZN 501 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc3 metalc ? ? A CYS 48 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 438 A ZN 501 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc4 metalc ? ? A CYS 51 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 441 A ZN 501 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc5 metalc ? ? A CYS 67 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 457 A ZN 502 1_555 ? ? ? ? ? ? ? 2.344 ? ? metalc6 metalc ? ? A CYS 73 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 463 A ZN 502 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc7 metalc ? ? A CYS 83 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 473 A ZN 502 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc8 metalc ? ? A CYS 86 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 476 A ZN 502 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc9 metalc ? ? B CYS 31 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 421 B ZN 501 1_555 ? ? ? ? ? ? ? 2.267 ? ? metalc10 metalc ? ? B CYS 34 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 424 B ZN 501 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc11 metalc ? ? B CYS 48 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 438 B ZN 501 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc12 metalc ? ? B CYS 51 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 441 B ZN 501 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc13 metalc ? ? B CYS 67 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 457 B ZN 502 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc14 metalc ? ? B CYS 73 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 463 B ZN 502 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc15 metalc ? ? B CYS 83 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 473 B ZN 502 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc16 metalc ? ? B CYS 86 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 476 B ZN 502 1_555 ? ? ? ? ? ? ? 2.391 ? ? hydrog1 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 18 N1 ? ? C DC 2 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 18 O6 ? ? C DC 2 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 18 N2 ? ? C DC 2 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 17 N3 ? ? C DA 3 D DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 17 O4 ? ? C DA 3 D DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 16 N3 ? ? C DG 4 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 16 O2 ? ? C DG 4 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 16 N4 ? ? C DG 4 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 15 N3 ? ? C DA 5 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 15 O4 ? ? C DA 5 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 14 N3 ? ? C DA 6 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 14 O4 ? ? C DA 6 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 13 N1 ? ? C DC 7 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 13 O6 ? ? C DC 7 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 13 N2 ? ? C DC 7 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DT 12 N3 ? ? C DA 8 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DT 12 O4 ? ? C DA 8 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 11 N3 ? ? C DG 9 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 11 O2 ? ? C DG 9 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 11 N4 ? ? C DG 9 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 10 N3 ? ? C DA 10 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 10 O4 ? ? C DA 10 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 11 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 11 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 11 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 8 N1 ? ? C DT 12 D DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 8 N6 ? ? C DT 12 D DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 7 N3 ? ? C DG 13 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 7 O2 ? ? C DG 13 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 7 N4 ? ? C DG 13 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 14 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 14 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DT 15 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 15 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DT 15 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 15 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 16 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 16 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 16 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DT 17 O4 ? ? ? 1_555 D DC 2 N4 ? ? C DT 17 D DC 2 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog39 hydrog ? ? C DT 17 N3 ? ? ? 1_555 D DA 3 N1 ? ? C DT 17 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DT 17 O4 ? ? ? 1_555 D DA 3 N6 ? ? C DT 17 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 18 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 18 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DG 18 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 18 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DG 18 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 18 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 31 ? A CYS 421 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 34 ? A CYS 424 ? 1_555 112.2 ? 2 SG ? A CYS 31 ? A CYS 421 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 48 ? A CYS 438 ? 1_555 116.0 ? 3 SG ? A CYS 34 ? A CYS 424 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 48 ? A CYS 438 ? 1_555 106.6 ? 4 SG ? A CYS 31 ? A CYS 421 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 51 ? A CYS 441 ? 1_555 109.1 ? 5 SG ? A CYS 34 ? A CYS 424 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 51 ? A CYS 441 ? 1_555 110.4 ? 6 SG ? A CYS 48 ? A CYS 438 ? 1_555 ZN ? E ZN . ? A ZN 501 ? 1_555 SG ? A CYS 51 ? A CYS 441 ? 1_555 101.9 ? 7 SG ? A CYS 67 ? A CYS 457 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 73 ? A CYS 463 ? 1_555 100.1 ? 8 SG ? A CYS 67 ? A CYS 457 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 83 ? A CYS 473 ? 1_555 114.7 ? 9 SG ? A CYS 73 ? A CYS 463 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 83 ? A CYS 473 ? 1_555 113.9 ? 10 SG ? A CYS 67 ? A CYS 457 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 86 ? A CYS 476 ? 1_555 111.5 ? 11 SG ? A CYS 73 ? A CYS 463 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 86 ? A CYS 476 ? 1_555 108.1 ? 12 SG ? A CYS 83 ? A CYS 473 ? 1_555 ZN ? F ZN . ? A ZN 502 ? 1_555 SG ? A CYS 86 ? A CYS 476 ? 1_555 108.3 ? 13 SG ? B CYS 31 ? B CYS 421 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 34 ? B CYS 424 ? 1_555 112.5 ? 14 SG ? B CYS 31 ? B CYS 421 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 48 ? B CYS 438 ? 1_555 116.3 ? 15 SG ? B CYS 34 ? B CYS 424 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 48 ? B CYS 438 ? 1_555 106.7 ? 16 SG ? B CYS 31 ? B CYS 421 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 51 ? B CYS 441 ? 1_555 106.5 ? 17 SG ? B CYS 34 ? B CYS 424 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 51 ? B CYS 441 ? 1_555 111.6 ? 18 SG ? B CYS 48 ? B CYS 438 ? 1_555 ZN ? G ZN . ? B ZN 501 ? 1_555 SG ? B CYS 51 ? B CYS 441 ? 1_555 102.9 ? 19 SG ? B CYS 67 ? B CYS 457 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 73 ? B CYS 463 ? 1_555 102.8 ? 20 SG ? B CYS 67 ? B CYS 457 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 83 ? B CYS 473 ? 1_555 112.6 ? 21 SG ? B CYS 73 ? B CYS 463 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 83 ? B CYS 473 ? 1_555 113.6 ? 22 SG ? B CYS 67 ? B CYS 457 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 86 ? B CYS 476 ? 1_555 109.2 ? 23 SG ? B CYS 73 ? B CYS 463 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 86 ? B CYS 476 ? 1_555 112.2 ? 24 SG ? B CYS 83 ? B CYS 473 ? 1_555 ZN ? H ZN . ? B ZN 502 ? 1_555 SG ? B CYS 86 ? B CYS 476 ? 1_555 106.5 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 40 ? HIS A 42 ? GLY A 430 HIS A 432 AA1 2 VAL A 45 ? THR A 47 ? VAL A 435 THR A 437 AA2 1 GLY B 40 ? HIS B 42 ? GLY B 430 HIS B 432 AA2 2 VAL B 45 ? THR B 47 ? VAL B 435 THR B 437 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N HIS A 42 ? N HIS A 432 O VAL A 45 ? O VAL A 435 AA2 1 2 N HIS B 42 ? N HIS B 432 O VAL B 45 ? O VAL B 435 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'binding site for residue ZN A 501' AC2 Software A ZN 502 ? 4 'binding site for residue ZN A 502' AC3 Software B ZN 501 ? 4 'binding site for residue ZN B 501' AC4 Software B ZN 502 ? 4 'binding site for residue ZN B 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 31 ? CYS A 421 . ? 1_555 ? 2 AC1 4 CYS A 34 ? CYS A 424 . ? 1_555 ? 3 AC1 4 CYS A 48 ? CYS A 438 . ? 1_555 ? 4 AC1 4 CYS A 51 ? CYS A 441 . ? 1_555 ? 5 AC2 4 CYS A 67 ? CYS A 457 . ? 1_555 ? 6 AC2 4 CYS A 73 ? CYS A 463 . ? 1_555 ? 7 AC2 4 CYS A 83 ? CYS A 473 . ? 1_555 ? 8 AC2 4 CYS A 86 ? CYS A 476 . ? 1_555 ? 9 AC3 4 CYS B 31 ? CYS B 421 . ? 1_555 ? 10 AC3 4 CYS B 34 ? CYS B 424 . ? 1_555 ? 11 AC3 4 CYS B 48 ? CYS B 438 . ? 1_555 ? 12 AC3 4 CYS B 51 ? CYS B 441 . ? 1_555 ? 13 AC4 4 CYS B 67 ? CYS B 457 . ? 1_555 ? 14 AC4 4 CYS B 73 ? CYS B 463 . ? 1_555 ? 15 AC4 4 CYS B 83 ? CYS B 473 . ? 1_555 ? 16 AC4 4 CYS B 86 ? CYS B 476 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 451 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 ND1 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HIS _pdbx_validate_close_contact.auth_seq_id_2 453 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 D _pdbx_validate_rmsd_angle.auth_comp_id_1 DC _pdbx_validate_rmsd_angle.auth_seq_id_1 9 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 D _pdbx_validate_rmsd_angle.auth_comp_id_2 DC _pdbx_validate_rmsd_angle.auth_seq_id_2 9 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 D _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 9 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 111.22 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 2.92 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS B 419 ? ? 60.21 69.74 2 1 VAL B 423 ? ? -95.83 -63.19 3 1 SER B 425 ? ? 71.08 -1.58 4 1 GLN B 452 ? ? 71.05 -9.06 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLN _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 452 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 HIS _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 453 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -145.46 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 5CBY _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THIS SEQUENCE WAS GENERATED FROM ANCESTRAL SEQUENCE RECONSTRUCTION' _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 391 ? A MET 1 2 1 Y 1 A HIS 392 ? A HIS 2 3 1 Y 1 A HIS 393 ? A HIS 3 4 1 Y 1 A HIS 394 ? A HIS 4 5 1 Y 1 A HIS 395 ? A HIS 5 6 1 Y 1 A HIS 396 ? A HIS 6 7 1 Y 1 A HIS 397 ? A HIS 7 8 1 Y 1 A SER 398 ? A SER 8 9 1 Y 1 A SER 399 ? A SER 9 10 1 Y 1 A GLY 400 ? A GLY 10 11 1 Y 1 A VAL 401 ? A VAL 11 12 1 Y 1 A ASP 402 ? A ASP 12 13 1 Y 1 A LEU 403 ? A LEU 13 14 1 Y 1 A GLY 404 ? A GLY 14 15 1 Y 1 A THR 405 ? A THR 15 16 1 Y 1 A GLU 406 ? A GLU 16 17 1 Y 1 A ASN 407 ? A ASN 17 18 1 Y 1 A LEU 408 ? A LEU 18 19 1 Y 1 A TYR 409 ? A TYR 19 20 1 Y 1 A PHE 410 ? A PHE 20 21 1 Y 1 A GLN 411 ? A GLN 21 22 1 Y 1 A SER 412 ? A SER 22 23 1 Y 1 A ASN 413 ? A ASN 23 24 1 Y 1 A ALA 414 ? A ALA 24 25 1 Y 1 A GLY 415 ? A GLY 25 26 1 Y 1 A PRO 416 ? A PRO 26 27 1 Y 1 A THR 493 ? A THR 103 28 1 Y 1 A LYS 494 ? A LYS 104 29 1 Y 1 A LYS 495 ? A LYS 105 30 1 Y 1 B MET 391 ? B MET 1 31 1 Y 1 B HIS 392 ? B HIS 2 32 1 Y 1 B HIS 393 ? B HIS 3 33 1 Y 1 B HIS 394 ? B HIS 4 34 1 Y 1 B HIS 395 ? B HIS 5 35 1 Y 1 B HIS 396 ? B HIS 6 36 1 Y 1 B HIS 397 ? B HIS 7 37 1 Y 1 B SER 398 ? B SER 8 38 1 Y 1 B SER 399 ? B SER 9 39 1 Y 1 B GLY 400 ? B GLY 10 40 1 Y 1 B VAL 401 ? B VAL 11 41 1 Y 1 B ASP 402 ? B ASP 12 42 1 Y 1 B LEU 403 ? B LEU 13 43 1 Y 1 B GLY 404 ? B GLY 14 44 1 Y 1 B THR 405 ? B THR 15 45 1 Y 1 B GLU 406 ? B GLU 16 46 1 Y 1 B ASN 407 ? B ASN 17 47 1 Y 1 B LEU 408 ? B LEU 18 48 1 Y 1 B TYR 409 ? B TYR 19 49 1 Y 1 B PHE 410 ? B PHE 20 50 1 Y 1 B GLN 411 ? B GLN 21 51 1 Y 1 B SER 412 ? B SER 22 52 1 Y 1 B ASN 413 ? B ASN 23 53 1 Y 1 B ALA 414 ? B ALA 24 54 1 Y 1 B GLY 415 ? B GLY 25 55 1 Y 1 B PRO 416 ? B PRO 26 56 1 Y 1 B PRO 417 ? B PRO 27 57 1 Y 1 B ALA 490 ? B ALA 100 58 1 Y 1 B ARG 491 ? B ARG 101 59 1 Y 1 B LYS 492 ? B LYS 102 60 1 Y 1 B THR 493 ? B THR 103 61 1 Y 1 B LYS 494 ? B LYS 104 62 1 Y 1 B LYS 495 ? B LYS 105 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TYR N N N N 464 TYR CA C N S 465 TYR C C N N 466 TYR O O N N 467 TYR CB C N N 468 TYR CG C Y N 469 TYR CD1 C Y N 470 TYR CD2 C Y N 471 TYR CE1 C Y N 472 TYR CE2 C Y N 473 TYR CZ C Y N 474 TYR OH O N N 475 TYR OXT O N N 476 TYR H H N N 477 TYR H2 H N N 478 TYR HA H N N 479 TYR HB2 H N N 480 TYR HB3 H N N 481 TYR HD1 H N N 482 TYR HD2 H N N 483 TYR HE1 H N N 484 TYR HE2 H N N 485 TYR HH H N N 486 TYR HXT H N N 487 VAL N N N N 488 VAL CA C N S 489 VAL C C N N 490 VAL O O N N 491 VAL CB C N N 492 VAL CG1 C N N 493 VAL CG2 C N N 494 VAL OXT O N N 495 VAL H H N N 496 VAL H2 H N N 497 VAL HA H N N 498 VAL HB H N N 499 VAL HG11 H N N 500 VAL HG12 H N N 501 VAL HG13 H N N 502 VAL HG21 H N N 503 VAL HG22 H N N 504 VAL HG23 H N N 505 VAL HXT H N N 506 ZN ZN ZN N N 507 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 VAL N CA sing N N 479 VAL N H sing N N 480 VAL N H2 sing N N 481 VAL CA C sing N N 482 VAL CA CB sing N N 483 VAL CA HA sing N N 484 VAL C O doub N N 485 VAL C OXT sing N N 486 VAL CB CG1 sing N N 487 VAL CB CG2 sing N N 488 VAL CB HB sing N N 489 VAL CG1 HG11 sing N N 490 VAL CG1 HG12 sing N N 491 VAL CG1 HG13 sing N N 492 VAL CG2 HG21 sing N N 493 VAL CG2 HG22 sing N N 494 VAL CG2 HG23 sing N N 495 VAL OXT HXT sing N N 496 # _ndb_struct_conf_na.entry_id 5CBY _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 2 1_555 D DG 18 1_555 0.359 -0.184 0.086 5.681 -6.798 -1.469 1 C_DC2:DG18_D C 2 ? D 18 ? 19 1 1 C DA 3 1_555 D DT 17 1_555 0.168 -0.097 0.482 11.733 -6.228 1.140 2 C_DA3:DT17_D C 3 ? D 17 ? 20 1 1 C DG 4 1_555 D DC 16 1_555 -0.292 -0.125 0.119 11.023 -8.934 4.515 3 C_DG4:DC16_D C 4 ? D 16 ? 19 1 1 C DA 5 1_555 D DT 15 1_555 -0.083 -0.165 -0.220 -3.997 -18.182 1.521 4 C_DA5:DT15_D C 5 ? D 15 ? 20 1 1 C DA 6 1_555 D DT 14 1_555 0.112 -0.115 0.098 -2.826 -17.496 3.177 5 C_DA6:DT14_D C 6 ? D 14 ? 20 1 1 C DC 7 1_555 D DG 13 1_555 0.284 -0.185 -0.083 0.416 -11.380 1.788 6 C_DC7:DG13_D C 7 ? D 13 ? 19 1 1 C DA 8 1_555 D DT 12 1_555 0.137 -0.094 0.446 16.456 -8.978 3.524 7 C_DA8:DT12_D C 8 ? D 12 ? 20 1 1 C DG 9 1_555 D DC 11 1_555 -0.139 -0.321 0.176 7.318 -8.429 -0.810 8 C_DG9:DC11_D C 9 ? D 11 ? 19 1 1 C DA 10 1_555 D DT 10 1_555 0.072 -0.182 0.096 0.206 -11.765 3.591 9 C_DA10:DT10_D C 10 ? D 10 ? 20 1 1 C DG 11 1_555 D DC 9 1_555 -0.268 -0.302 -0.285 -11.438 -17.620 1.307 10 C_DG11:DC9_D C 11 ? D 9 ? 19 1 1 C DT 12 1_555 D DA 8 1_555 -0.154 -0.073 0.194 -12.545 -15.411 7.304 11 C_DT12:DA8_D C 12 ? D 8 ? 20 1 1 C DG 13 1_555 D DC 7 1_555 -0.479 -0.129 0.092 -1.859 -11.170 0.921 12 C_DG13:DC7_D C 13 ? D 7 ? 19 1 1 C DT 14 1_555 D DA 6 1_555 -0.371 -0.281 -0.097 -1.135 -14.781 4.610 13 C_DT14:DA6_D C 14 ? D 6 ? 20 1 1 C DT 15 1_555 D DA 5 1_555 0.004 -0.405 -0.144 1.593 -12.531 0.100 14 C_DT15:DA5_D C 15 ? D 5 ? 20 1 1 C DC 16 1_555 D DG 4 1_555 0.239 -0.245 0.203 -3.606 -9.883 2.620 15 C_DC16:DG4_D C 16 ? D 4 ? 19 1 1 C DT 17 1_555 D DA 3 1_555 0.176 -0.153 0.366 -1.106 -8.535 1.453 16 C_DT17:DA3_D C 17 ? D 3 ? 20 1 1 C DG 18 1_555 D DC 2 1_555 -0.212 0.086 0.670 20.892 2.129 2.804 17 C_DG18:DC2_D C 18 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 2 1_555 D DG 18 1_555 C DA 3 1_555 D DT 17 1_555 -0.291 0.258 3.200 -2.501 1.306 38.004 0.232 0.134 3.219 2.003 3.835 38.105 1 CC_DC2DA3:DT17DG18_DD C 2 ? D 18 ? C 3 ? D 17 ? 1 C DA 3 1_555 D DT 17 1_555 C DG 4 1_555 D DC 16 1_555 0.351 -0.577 3.397 1.733 1.875 28.398 -1.615 -0.304 3.368 3.812 -3.523 28.510 2 CC_DA3DG4:DC16DT17_DD C 3 ? D 17 ? C 4 ? D 16 ? 1 C DG 4 1_555 D DC 16 1_555 C DA 5 1_555 D DT 15 1_555 -0.356 -0.328 3.576 1.660 1.294 40.711 -0.627 0.710 3.547 1.858 -2.384 40.763 3 CC_DG4DA5:DT15DC16_DD C 4 ? D 16 ? C 5 ? D 15 ? 1 C DA 5 1_555 D DT 15 1_555 C DA 6 1_555 D DT 14 1_555 0.208 -0.061 3.243 -1.484 -0.850 37.239 0.016 -0.519 3.234 -1.330 2.323 37.277 4 CC_DA5DA6:DT14DT15_DD C 5 ? D 15 ? C 6 ? D 14 ? 1 C DA 6 1_555 D DT 14 1_555 C DC 7 1_555 D DG 13 1_555 0.363 -0.001 3.271 2.248 -1.923 37.269 0.253 -0.270 3.283 -3.003 -3.511 37.382 5 CC_DA6DC7:DG13DT14_DD C 6 ? D 14 ? C 7 ? D 13 ? 1 C DC 7 1_555 D DG 13 1_555 C DA 8 1_555 D DT 12 1_555 0.341 0.006 3.037 -2.063 5.086 28.922 -0.995 -1.080 2.964 10.068 4.084 29.428 6 CC_DC7DA8:DT12DG13_DD C 7 ? D 13 ? C 8 ? D 12 ? 1 C DA 8 1_555 D DT 12 1_555 C DG 9 1_555 D DC 11 1_555 -0.169 -0.792 3.519 0.376 3.141 31.104 -2.103 0.390 3.422 5.838 -0.699 31.260 7 CC_DA8DG9:DC11DT12_DD C 8 ? D 12 ? C 9 ? D 11 ? 1 C DG 9 1_555 D DC 11 1_555 C DA 10 1_555 D DT 10 1_555 -0.062 -0.446 3.467 0.325 -0.386 38.833 -0.621 0.135 3.470 -0.581 -0.489 38.836 8 CC_DG9DA10:DT10DC11_DD C 9 ? D 11 ? C 10 ? D 10 ? 1 C DA 10 1_555 D DT 10 1_555 C DG 11 1_555 D DC 9 1_555 -0.081 -0.692 3.626 0.107 6.324 35.009 -2.140 0.149 3.452 10.408 -0.176 35.558 9 CC_DA10DG11:DC9DT10_DD C 10 ? D 10 ? C 11 ? D 9 ? 1 C DG 11 1_555 D DC 9 1_555 C DT 12 1_555 D DA 8 1_555 0.122 -0.586 3.280 -1.597 -0.646 32.299 -0.937 -0.503 3.281 -1.160 2.868 32.343 10 CC_DG11DT12:DA8DC9_DD C 11 ? D 9 ? C 12 ? D 8 ? 1 C DT 12 1_555 D DA 8 1_555 C DG 13 1_555 D DC 7 1_555 -0.384 -0.176 3.136 -2.829 4.725 30.295 -1.217 0.192 3.096 8.947 5.357 30.780 11 CC_DT12DG13:DC7DA8_DD C 12 ? D 8 ? C 13 ? D 7 ? 1 C DG 13 1_555 D DC 7 1_555 C DT 14 1_555 D DA 6 1_555 0.032 0.116 3.363 2.969 -7.713 40.811 1.001 0.277 3.283 -10.925 -4.205 41.604 12 CC_DG13DT14:DA6DC7_DD C 13 ? D 7 ? C 14 ? D 6 ? 1 C DT 14 1_555 D DA 6 1_555 C DT 15 1_555 D DA 5 1_555 -0.582 0.051 3.307 0.255 2.663 32.331 -0.382 1.087 3.296 4.772 -0.456 32.439 13 CC_DT14DT15:DA5DA6_DD C 14 ? D 6 ? C 15 ? D 5 ? 1 C DT 15 1_555 D DA 5 1_555 C DC 16 1_555 D DG 4 1_555 0.724 -0.111 3.481 -0.697 4.597 37.650 -0.794 -1.208 3.431 7.090 1.076 37.925 14 CC_DT15DC16:DG4DA5_DD C 15 ? D 5 ? C 16 ? D 4 ? 1 C DC 16 1_555 D DG 4 1_555 C DT 17 1_555 D DA 3 1_555 -0.018 -0.410 3.299 1.225 3.854 29.268 -1.623 0.296 3.216 7.581 -2.409 29.540 15 CC_DC16DT17:DA3DG4_DD C 16 ? D 4 ? C 17 ? D 3 ? 1 C DT 17 1_555 D DA 3 1_555 C DG 18 1_555 D DC 2 1_555 0.973 0.717 2.782 1.618 2.864 32.736 0.842 -1.478 2.876 5.065 -2.861 32.897 16 CC_DT17DG18:DC2DA3_DD C 17 ? D 3 ? C 18 ? D 2 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)' 'United States' R01DK095750 1 'American Heart Association' 'United States' 14GRNT20460124 2 'American Heart Association' 'United States' 13PRE16920012 3 # _atom_sites.entry_id 5CBY _atom_sites.fract_transf_matrix[1][1] 0.007596 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004324 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025775 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011712 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_