data_5CCD # _entry.id 5CCD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CCD pdb_00005ccd 10.2210/pdb5ccd/pdb WWPDB D_1000211378 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-11-23 2 'Structure model' 1 1 2016-12-28 3 'Structure model' 1 2 2020-01-01 4 'Structure model' 1 3 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 3 'Structure model' pdbx_struct_special_symmetry 3 3 'Structure model' struct_keywords 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_struct_keywords.pdbx_keywords' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CCD _pdbx_database_status.recvd_initial_deposition_date 2015-07-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Banco, M.T.' 1 ? 'Kovalevsky, A.Y.' 2 ? 'Ronning, D.R.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 113 _citation.language ? _citation.page_first 13756 _citation.page_last 13761 _citation.title ;Neutron structures of the Helicobacter pylori 5'-methylthioadenosine nucleosidase highlight proton sharing and protonation states. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1609718113 _citation.pdbx_database_id_PubMed 27856757 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banco, M.T.' 1 ? primary 'Mishra, V.' 2 ? primary 'Ostermann, A.' 3 ? primary 'Schrader, T.E.' 4 ? primary 'Evans, G.B.' 5 ? primary 'Kovalevsky, A.' 6 ? primary 'Ronning, D.R.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aminodeoxyfutalosine nucleosidase' 25128.936 1 3.2.2.30,3.2.2.9 D198N ? ? 2 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 3 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Aminofutalosine nucleosidase,5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase,MTAN,6-amino-6-deoxyfutalosine N-ribosylhydrolase ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGV AGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKE RKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISNNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGV AGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKE RKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISNNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 S-ADENOSYL-L-HOMOCYSTEINE SAH 3 water DOD # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 GLN n 1 5 LYS n 1 6 ILE n 1 7 GLY n 1 8 ILE n 1 9 LEU n 1 10 GLY n 1 11 ALA n 1 12 MET n 1 13 ARG n 1 14 GLU n 1 15 GLU n 1 16 ILE n 1 17 THR n 1 18 PRO n 1 19 ILE n 1 20 LEU n 1 21 GLU n 1 22 LEU n 1 23 PHE n 1 24 GLY n 1 25 VAL n 1 26 ASP n 1 27 PHE n 1 28 GLU n 1 29 GLU n 1 30 ILE n 1 31 PRO n 1 32 LEU n 1 33 GLY n 1 34 GLY n 1 35 ASN n 1 36 VAL n 1 37 PHE n 1 38 HIS n 1 39 LYS n 1 40 GLY n 1 41 VAL n 1 42 TYR n 1 43 HIS n 1 44 ASN n 1 45 LYS n 1 46 GLU n 1 47 ILE n 1 48 ILE n 1 49 VAL n 1 50 ALA n 1 51 TYR n 1 52 SER n 1 53 LYS n 1 54 ILE n 1 55 GLY n 1 56 LYS n 1 57 VAL n 1 58 HIS n 1 59 SER n 1 60 THR n 1 61 LEU n 1 62 THR n 1 63 THR n 1 64 THR n 1 65 SER n 1 66 MET n 1 67 ILE n 1 68 LEU n 1 69 ALA n 1 70 PHE n 1 71 GLY n 1 72 VAL n 1 73 GLN n 1 74 LYS n 1 75 VAL n 1 76 LEU n 1 77 PHE n 1 78 SER n 1 79 GLY n 1 80 VAL n 1 81 ALA n 1 82 GLY n 1 83 SER n 1 84 LEU n 1 85 VAL n 1 86 LYS n 1 87 ASP n 1 88 LEU n 1 89 LYS n 1 90 ILE n 1 91 ASN n 1 92 ASP n 1 93 LEU n 1 94 LEU n 1 95 VAL n 1 96 ALA n 1 97 THR n 1 98 GLN n 1 99 LEU n 1 100 VAL n 1 101 GLN n 1 102 HIS n 1 103 ASP n 1 104 VAL n 1 105 ASP n 1 106 LEU n 1 107 SER n 1 108 ALA n 1 109 PHE n 1 110 ASP n 1 111 HIS n 1 112 PRO n 1 113 LEU n 1 114 GLY n 1 115 PHE n 1 116 ILE n 1 117 PRO n 1 118 GLU n 1 119 SER n 1 120 ALA n 1 121 ILE n 1 122 PHE n 1 123 ILE n 1 124 GLU n 1 125 THR n 1 126 SER n 1 127 GLY n 1 128 SER n 1 129 LEU n 1 130 ASN n 1 131 ALA n 1 132 LEU n 1 133 ALA n 1 134 LYS n 1 135 LYS n 1 136 ILE n 1 137 ALA n 1 138 ASN n 1 139 GLU n 1 140 GLN n 1 141 HIS n 1 142 ILE n 1 143 ALA n 1 144 LEU n 1 145 LYS n 1 146 GLU n 1 147 GLY n 1 148 VAL n 1 149 ILE n 1 150 ALA n 1 151 SER n 1 152 GLY n 1 153 ASP n 1 154 GLN n 1 155 PHE n 1 156 VAL n 1 157 HIS n 1 158 SER n 1 159 LYS n 1 160 GLU n 1 161 ARG n 1 162 LYS n 1 163 GLU n 1 164 PHE n 1 165 LEU n 1 166 VAL n 1 167 SER n 1 168 GLU n 1 169 PHE n 1 170 LYS n 1 171 ALA n 1 172 SER n 1 173 ALA n 1 174 VAL n 1 175 GLU n 1 176 MET n 1 177 GLU n 1 178 GLY n 1 179 ALA n 1 180 SER n 1 181 VAL n 1 182 ALA n 1 183 PHE n 1 184 VAL n 1 185 CYS n 1 186 GLN n 1 187 LYS n 1 188 PHE n 1 189 GLY n 1 190 VAL n 1 191 PRO n 1 192 CYS n 1 193 CYS n 1 194 VAL n 1 195 LEU n 1 196 ARG n 1 197 SER n 1 198 ILE n 1 199 SER n 1 200 ASN n 1 201 ASN n 1 202 ALA n 1 203 ASP n 1 204 GLU n 1 205 LYS n 1 206 ALA n 1 207 GLY n 1 208 MET n 1 209 SER n 1 210 PHE n 1 211 ASP n 1 212 GLU n 1 213 PHE n 1 214 LEU n 1 215 GLU n 1 216 LYS n 1 217 SER n 1 218 ALA n 1 219 HIS n 1 220 THR n 1 221 SER n 1 222 ALA n 1 223 LYS n 1 224 PHE n 1 225 LEU n 1 226 LYS n 1 227 SER n 1 228 MET n 1 229 VAL n 1 230 ASP n 1 231 GLU n 1 232 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 232 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mtnN, mtn, jhp_0082' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'J99 / ATCC 700824' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helicobacter pylori (strain J99 / ATCC 700824)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85963 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DOD non-polymer . 'DEUTERATED WATER' ? 'D2 O' 20.028 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 PRO 2 0 ? ? ? A . n A 1 3 GLY 3 1 1 GLY GLY A . n A 1 4 GLN 4 2 2 GLN GLN A . n A 1 5 LYS 5 3 3 LYS LYS A . n A 1 6 ILE 6 4 4 ILE ILE A . n A 1 7 GLY 7 5 5 GLY GLY A . n A 1 8 ILE 8 6 6 ILE ILE A . n A 1 9 LEU 9 7 7 LEU LEU A . n A 1 10 GLY 10 8 8 GLY GLY A . n A 1 11 ALA 11 9 9 ALA ALA A . n A 1 12 MET 12 10 10 MET MET A . n A 1 13 ARG 13 11 11 ARG ARG A . n A 1 14 GLU 14 12 12 GLU GLU A . n A 1 15 GLU 15 13 13 GLU GLU A . n A 1 16 ILE 16 14 14 ILE ILE A . n A 1 17 THR 17 15 15 THR THR A . n A 1 18 PRO 18 16 16 PRO PRO A . n A 1 19 ILE 19 17 17 ILE ILE A . n A 1 20 LEU 20 18 18 LEU LEU A . n A 1 21 GLU 21 19 19 GLU GLU A . n A 1 22 LEU 22 20 20 LEU LEU A . n A 1 23 PHE 23 21 21 PHE PHE A . n A 1 24 GLY 24 22 22 GLY GLY A . n A 1 25 VAL 25 23 23 VAL VAL A . n A 1 26 ASP 26 24 24 ASP ASP A . n A 1 27 PHE 27 25 25 PHE PHE A . n A 1 28 GLU 28 26 26 GLU GLU A . n A 1 29 GLU 29 27 27 GLU GLU A . n A 1 30 ILE 30 28 28 ILE ILE A . n A 1 31 PRO 31 29 29 PRO PRO A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 GLY 33 31 31 GLY GLY A . n A 1 34 GLY 34 32 32 GLY GLY A . n A 1 35 ASN 35 33 33 ASN ASN A . n A 1 36 VAL 36 34 34 VAL VAL A . n A 1 37 PHE 37 35 35 PHE PHE A . n A 1 38 HIS 38 36 36 HIS HIS A . n A 1 39 LYS 39 37 37 LYS LYS A . n A 1 40 GLY 40 38 38 GLY GLY A . n A 1 41 VAL 41 39 39 VAL VAL A . n A 1 42 TYR 42 40 40 TYR TYR A . n A 1 43 HIS 43 41 41 HIS HIS A . n A 1 44 ASN 44 42 42 ASN ASN A . n A 1 45 LYS 45 43 43 LYS LYS A . n A 1 46 GLU 46 44 44 GLU GLU A . n A 1 47 ILE 47 45 45 ILE ILE A . n A 1 48 ILE 48 46 46 ILE ILE A . n A 1 49 VAL 49 47 47 VAL VAL A . n A 1 50 ALA 50 48 48 ALA ALA A . n A 1 51 TYR 51 49 49 TYR TYR A . n A 1 52 SER 52 50 50 SER SER A . n A 1 53 LYS 53 51 51 LYS LYS A . n A 1 54 ILE 54 52 52 ILE ILE A . n A 1 55 GLY 55 53 53 GLY GLY A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 VAL 57 55 55 VAL VAL A . n A 1 58 HIS 58 56 56 HIS HIS A . n A 1 59 SER 59 57 57 SER SER A . n A 1 60 THR 60 58 58 THR THR A . n A 1 61 LEU 61 59 59 LEU LEU A . n A 1 62 THR 62 60 60 THR THR A . n A 1 63 THR 63 61 61 THR THR A . n A 1 64 THR 64 62 62 THR THR A . n A 1 65 SER 65 63 63 SER SER A . n A 1 66 MET 66 64 64 MET MET A . n A 1 67 ILE 67 65 65 ILE ILE A . n A 1 68 LEU 68 66 66 LEU LEU A . n A 1 69 ALA 69 67 67 ALA ALA A . n A 1 70 PHE 70 68 68 PHE PHE A . n A 1 71 GLY 71 69 69 GLY GLY A . n A 1 72 VAL 72 70 70 VAL VAL A . n A 1 73 GLN 73 71 71 GLN GLN A . n A 1 74 LYS 74 72 72 LYS LYS A . n A 1 75 VAL 75 73 73 VAL VAL A . n A 1 76 LEU 76 74 74 LEU LEU A . n A 1 77 PHE 77 75 75 PHE PHE A . n A 1 78 SER 78 76 76 SER SER A . n A 1 79 GLY 79 77 77 GLY GLY A . n A 1 80 VAL 80 78 78 VAL VAL A . n A 1 81 ALA 81 79 79 ALA ALA A . n A 1 82 GLY 82 80 80 GLY GLY A . n A 1 83 SER 83 81 81 SER SER A . n A 1 84 LEU 84 82 82 LEU LEU A . n A 1 85 VAL 85 83 83 VAL VAL A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 ASP 87 85 85 ASP ASP A . n A 1 88 LEU 88 86 86 LEU LEU A . n A 1 89 LYS 89 87 87 LYS LYS A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 ASN 91 89 89 ASN ASN A . n A 1 92 ASP 92 90 90 ASP ASP A . n A 1 93 LEU 93 91 91 LEU LEU A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 VAL 95 93 93 VAL VAL A . n A 1 96 ALA 96 94 94 ALA ALA A . n A 1 97 THR 97 95 95 THR THR A . n A 1 98 GLN 98 96 96 GLN GLN A . n A 1 99 LEU 99 97 97 LEU LEU A . n A 1 100 VAL 100 98 98 VAL VAL A . n A 1 101 GLN 101 99 99 GLN GLN A . n A 1 102 HIS 102 100 100 HIS HIS A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 VAL 104 102 102 VAL VAL A . n A 1 105 ASP 105 103 103 ASP ASP A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 SER 107 105 105 SER SER A . n A 1 108 ALA 108 106 106 ALA ALA A . n A 1 109 PHE 109 107 107 PHE PHE A . n A 1 110 ASP 110 108 108 ASP ASP A . n A 1 111 HIS 111 109 109 HIS HIS A . n A 1 112 PRO 112 110 110 PRO PRO A . n A 1 113 LEU 113 111 111 LEU LEU A . n A 1 114 GLY 114 112 112 GLY GLY A . n A 1 115 PHE 115 113 113 PHE PHE A . n A 1 116 ILE 116 114 114 ILE ILE A . n A 1 117 PRO 117 115 115 PRO PRO A . n A 1 118 GLU 118 116 116 GLU GLU A . n A 1 119 SER 119 117 117 SER SER A . n A 1 120 ALA 120 118 118 ALA ALA A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 PHE 122 120 120 PHE PHE A . n A 1 123 ILE 123 121 121 ILE ILE A . n A 1 124 GLU 124 122 122 GLU GLU A . n A 1 125 THR 125 123 123 THR THR A . n A 1 126 SER 126 124 124 SER SER A . n A 1 127 GLY 127 125 125 GLY GLY A . n A 1 128 SER 128 126 126 SER SER A . n A 1 129 LEU 129 127 127 LEU LEU A . n A 1 130 ASN 130 128 128 ASN ASN A . n A 1 131 ALA 131 129 129 ALA ALA A . n A 1 132 LEU 132 130 130 LEU LEU A . n A 1 133 ALA 133 131 131 ALA ALA A . n A 1 134 LYS 134 132 132 LYS LYS A . n A 1 135 LYS 135 133 133 LYS LYS A . n A 1 136 ILE 136 134 134 ILE ILE A . n A 1 137 ALA 137 135 135 ALA ALA A . n A 1 138 ASN 138 136 136 ASN ASN A . n A 1 139 GLU 139 137 137 GLU GLU A . n A 1 140 GLN 140 138 138 GLN GLN A . n A 1 141 HIS 141 139 139 HIS HIS A . n A 1 142 ILE 142 140 140 ILE ILE A . n A 1 143 ALA 143 141 141 ALA ALA A . n A 1 144 LEU 144 142 142 LEU LEU A . n A 1 145 LYS 145 143 143 LYS LYS A . n A 1 146 GLU 146 144 144 GLU GLU A . n A 1 147 GLY 147 145 145 GLY GLY A . n A 1 148 VAL 148 146 146 VAL VAL A . n A 1 149 ILE 149 147 147 ILE ILE A . n A 1 150 ALA 150 148 148 ALA ALA A . n A 1 151 SER 151 149 149 SER SER A . n A 1 152 GLY 152 150 150 GLY GLY A . n A 1 153 ASP 153 151 151 ASP ASP A . n A 1 154 GLN 154 152 152 GLN GLN A . n A 1 155 PHE 155 153 153 PHE PHE A . n A 1 156 VAL 156 154 154 VAL VAL A . n A 1 157 HIS 157 155 155 HIS HIS A . n A 1 158 SER 158 156 156 SER SER A . n A 1 159 LYS 159 157 157 LYS LYS A . n A 1 160 GLU 160 158 158 GLU GLU A . n A 1 161 ARG 161 159 159 ARG ARG A . n A 1 162 LYS 162 160 160 LYS LYS A . n A 1 163 GLU 163 161 161 GLU GLU A . n A 1 164 PHE 164 162 162 PHE PHE A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 VAL 166 164 164 VAL VAL A . n A 1 167 SER 167 165 165 SER SER A . n A 1 168 GLU 168 166 166 GLU GLU A . n A 1 169 PHE 169 167 167 PHE PHE A . n A 1 170 LYS 170 168 168 LYS LYS A . n A 1 171 ALA 171 169 169 ALA ALA A . n A 1 172 SER 172 170 170 SER SER A . n A 1 173 ALA 173 171 171 ALA ALA A . n A 1 174 VAL 174 172 172 VAL VAL A . n A 1 175 GLU 175 173 173 GLU GLU A . n A 1 176 MET 176 174 174 MET MET A . n A 1 177 GLU 177 175 175 GLU GLU A . n A 1 178 GLY 178 176 176 GLY GLY A . n A 1 179 ALA 179 177 177 ALA ALA A . n A 1 180 SER 180 178 178 SER SER A . n A 1 181 VAL 181 179 179 VAL VAL A . n A 1 182 ALA 182 180 180 ALA ALA A . n A 1 183 PHE 183 181 181 PHE PHE A . n A 1 184 VAL 184 182 182 VAL VAL A . n A 1 185 CYS 185 183 183 CYS CYS A . n A 1 186 GLN 186 184 184 GLN GLN A . n A 1 187 LYS 187 185 185 LYS LYS A . n A 1 188 PHE 188 186 186 PHE PHE A . n A 1 189 GLY 189 187 187 GLY GLY A . n A 1 190 VAL 190 188 188 VAL VAL A . n A 1 191 PRO 191 189 189 PRO PRO A . n A 1 192 CYS 192 190 190 CYS CYS A . n A 1 193 CYS 193 191 191 CYS CYS A . n A 1 194 VAL 194 192 192 VAL VAL A . n A 1 195 LEU 195 193 193 LEU LEU A . n A 1 196 ARG 196 194 194 ARG ARG A . n A 1 197 SER 197 195 195 SER SER A . n A 1 198 ILE 198 196 196 ILE ILE A . n A 1 199 SER 199 197 197 SER SER A . n A 1 200 ASN 200 198 198 ASN ASN A . n A 1 201 ASN 201 199 199 ASN ASN A . n A 1 202 ALA 202 200 200 ALA ALA A . n A 1 203 ASP 203 201 201 ASP ASP A . n A 1 204 GLU 204 202 202 GLU GLU A . n A 1 205 LYS 205 203 203 LYS LYS A . n A 1 206 ALA 206 204 204 ALA ALA A . n A 1 207 GLY 207 205 205 GLY GLY A . n A 1 208 MET 208 206 206 MET MET A . n A 1 209 SER 209 207 207 SER SER A . n A 1 210 PHE 210 208 208 PHE PHE A . n A 1 211 ASP 211 209 209 ASP ASP A . n A 1 212 GLU 212 210 210 GLU GLU A . n A 1 213 PHE 213 211 211 PHE PHE A . n A 1 214 LEU 214 212 212 LEU LEU A . n A 1 215 GLU 215 213 213 GLU GLU A . n A 1 216 LYS 216 214 214 LYS LYS A . n A 1 217 SER 217 215 215 SER SER A . n A 1 218 ALA 218 216 216 ALA ALA A . n A 1 219 HIS 219 217 217 HIS HIS A . n A 1 220 THR 220 218 218 THR THR A . n A 1 221 SER 221 219 219 SER SER A . n A 1 222 ALA 222 220 220 ALA ALA A . n A 1 223 LYS 223 221 221 LYS LYS A . n A 1 224 PHE 224 222 222 PHE PHE A . n A 1 225 LEU 225 223 223 LEU LEU A . n A 1 226 LYS 226 224 224 LYS LYS A . n A 1 227 SER 227 225 225 SER SER A . n A 1 228 MET 228 226 226 MET MET A . n A 1 229 VAL 229 227 227 VAL VAL A . n A 1 230 ASP 230 228 228 ASP ASP A . n A 1 231 GLU 231 229 229 GLU GLU A . n A 1 232 LEU 232 230 230 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH 1 300 300 SAH SAH A . C 3 DOD 1 401 1035 DOD DOD A . C 3 DOD 2 402 1027 DOD DOD A . C 3 DOD 3 403 1093 DOD DOD A . C 3 DOD 4 404 1008 DOD DOD A . C 3 DOD 5 405 1092 DOD DOD A . C 3 DOD 6 406 1070 DOD DOD A . C 3 DOD 7 407 1056 DOD DOD A . C 3 DOD 8 408 1032 DOD DOD A . C 3 DOD 9 409 1099 DOD DOD A . C 3 DOD 10 410 1012 DOD DOD A . C 3 DOD 11 411 1103 DOD DOD A . C 3 DOD 12 412 1083 DOD DOD A . C 3 DOD 13 413 1097 DOD DOD A . C 3 DOD 14 414 1020 DOD DOD A . C 3 DOD 15 415 1090 DOD DOD A . C 3 DOD 16 416 1015 DOD DOD A . C 3 DOD 17 417 1051 DOD DOD A . C 3 DOD 18 418 1022 DOD DOD A . C 3 DOD 19 419 1013 DOD DOD A . C 3 DOD 20 420 1047 DOD DOD A . C 3 DOD 21 421 1021 DOD DOD A . C 3 DOD 22 422 1007 DOD DOD A . C 3 DOD 23 423 1095 DOD DOD A . C 3 DOD 24 424 1069 DOD DOD A . C 3 DOD 25 425 1005 DOD DOD A . C 3 DOD 26 426 1025 DOD DOD A . C 3 DOD 27 427 1009 DOD DOD A . C 3 DOD 28 428 1014 DOD DOD A . C 3 DOD 29 429 1011 DOD DOD A . C 3 DOD 30 430 1002 DOD DOD A . C 3 DOD 31 431 1114 DOD DOD A . C 3 DOD 32 432 1089 DOD DOD A . C 3 DOD 33 433 1017 DOD DOD A . C 3 DOD 34 434 1041 DOD DOD A . C 3 DOD 35 435 1004 DOD DOD A . C 3 DOD 36 436 1024 DOD DOD A . C 3 DOD 37 437 1006 DOD DOD A . C 3 DOD 38 438 1088 DOD DOD A . C 3 DOD 39 439 1045 DOD DOD A . C 3 DOD 40 440 1019 DOD DOD A . C 3 DOD 41 441 1010 DOD DOD A . C 3 DOD 42 442 1031 DOD DOD A . C 3 DOD 43 443 1054 DOD DOD A . C 3 DOD 44 444 1018 DOD DOD A . C 3 DOD 45 445 1026 DOD DOD A . C 3 DOD 46 446 1052 DOD DOD A . C 3 DOD 47 447 1028 DOD DOD A . C 3 DOD 48 448 1036 DOD DOD A . C 3 DOD 49 449 1003 DOD DOD A . C 3 DOD 50 450 1001 DOD DOD A . C 3 DOD 51 451 1023 DOD DOD A . C 3 DOD 52 452 1117 DOD DOD A . C 3 DOD 53 453 1034 DOD DOD A . C 3 DOD 54 454 1108 DOD DOD A . C 3 DOD 55 455 1038 DOD DOD A . C 3 DOD 56 456 1101 DOD DOD A . C 3 DOD 57 457 1115 DOD DOD A . C 3 DOD 58 458 1043 DOD DOD A . C 3 DOD 59 459 1102 DOD DOD A . C 3 DOD 60 460 1105 DOD DOD A . C 3 DOD 61 461 1081 DOD DOD A . C 3 DOD 62 462 1040 DOD DOD A . C 3 DOD 63 463 1111 DOD DOD A . C 3 DOD 64 464 1091 DOD DOD A . C 3 DOD 65 465 1094 DOD DOD A . C 3 DOD 66 466 1086 DOD DOD A . C 3 DOD 67 467 1116 DOD DOD A . C 3 DOD 68 468 1085 DOD DOD A . C 3 DOD 69 469 1106 DOD DOD A . C 3 DOD 70 470 1118 DOD DOD A . C 3 DOD 71 471 1096 DOD DOD A . C 3 DOD 72 472 1104 DOD DOD A . C 3 DOD 73 473 1098 DOD DOD A . C 3 DOD 74 474 1109 DOD DOD A . C 3 DOD 75 475 1112 DOD DOD A . C 3 DOD 76 476 1100 DOD DOD A . C 3 DOD 77 477 1113 DOD DOD A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? CNS ? ? ? 'nCNS 1.0.0' 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 ? refinement ? ? ? ? ? ? ? ? ? ? ? CNS ? ? ? 1.0.0 6 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? O ? ? ? . 7 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 8 ? refinement ? ? ? ? ? ? ? ? ? ? ? nCNS ? ? ? 1.0.0 9 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5CCD _cell.details ? _cell.formula_units_Z ? _cell.length_a 83.189 _cell.length_a_esd ? _cell.length_b 83.189 _cell.length_b_esd ? _cell.length_c 67.633 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _exptl.entry_id _exptl.method _exptl.crystals_number 5CCD 'X-RAY DIFFRACTION' 1 5CCD 'NEUTRON DIFFRACTION' 1 # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 550 MME, Magnesium Chloride Hexahydrate and HEPES pH 7' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 293 ? 1 2 293.0 ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2014-06-07 _diffrn_detector.details 'OSMIC VARIMAX' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.54 1.0 2 2.8 1.0 3 4.5 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 'ROTATING ANODE' 'RIGAKU MICROMAX-007 HF' ? ? 1.54 ? 2 'NUCLEAR REACTOR' ? ? IMAGINE '2.8 - 4.5' ? # loop_ _reflns.pdbx_diffrn_id _reflns.pdbx_ordinal _reflns.entry_id _reflns.observed_criterion_sigma_I _reflns.observed_criterion_sigma_F _reflns.d_resolution_low _reflns.d_resolution_high _reflns.number_obs _reflns.number_all _reflns.percent_possible_obs _reflns.pdbx_Rmerge_I_obs _reflns.pdbx_Rsym_value _reflns.pdbx_netI_over_sigmaI _reflns.B_iso_Wilson_estimate _reflns.pdbx_redundancy 1 1 5CCD ? ? 40.00 2.2 13696 ? 97.1 0.076 ? 19.5 ? 4.3 2 2 5CCD ? ? 40.0 2.6 7175 ? 74.7 0.196 ? 3.2 ? 3.5 # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.number_measured_obs _reflns_shell.number_unique_all 1 1 1.89 2.28 95.2 0.627 ? 2.3 4.4 ? ? 2 2 2.49 2.63 58.5 0.337 ? 1.7 2.6 ? ? # loop_ _refine.pdbx_refine_id _refine.entry_id _refine.pdbx_diffrn_id _refine.pdbx_TLS_residual_ADP_flag _refine.ls_number_reflns_obs _refine.ls_number_reflns_all _refine.pdbx_ls_sigma_I _refine.pdbx_ls_sigma_F _refine.pdbx_data_cutoff_high_absF _refine.pdbx_data_cutoff_low_absF _refine.pdbx_data_cutoff_high_rms_absF _refine.ls_d_res_low _refine.ls_d_res_high _refine.ls_percent_reflns_obs _refine.ls_R_factor_obs _refine.ls_R_factor_all _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free _refine.ls_R_factor_R_free_error _refine.ls_R_factor_R_free_error_details _refine.ls_percent_reflns_R_free _refine.ls_number_reflns_R_free _refine.ls_number_parameters _refine.ls_number_restraints _refine.occupancy_min _refine.occupancy_max _refine.correlation_coeff_Fo_to_Fc _refine.correlation_coeff_Fo_to_Fc_free _refine.B_iso_mean _refine.aniso_B[1][1] _refine.aniso_B[2][2] _refine.aniso_B[3][3] _refine.aniso_B[1][2] _refine.aniso_B[1][3] _refine.aniso_B[2][3] _refine.solvent_model_details _refine.solvent_model_param_ksol _refine.solvent_model_param_bsol _refine.pdbx_solvent_vdw_probe_radii _refine.pdbx_solvent_ion_probe_radii _refine.pdbx_solvent_shrinkage_radii _refine.pdbx_ls_cross_valid_method _refine.details _refine.pdbx_starting_model _refine.pdbx_method_to_determine_struct _refine.pdbx_isotropic_thermal_model _refine.pdbx_stereochemistry_target_values _refine.pdbx_stereochem_target_val_spec_case _refine.pdbx_R_Free_selection_details _refine.pdbx_overall_ESU_R _refine.pdbx_overall_ESU_R_Free _refine.overall_SU_ML _refine.pdbx_overall_phase_error _refine.overall_SU_B _refine.overall_SU_R_Cruickshank_DPI _refine.pdbx_overall_SU_R_free_Cruickshank_DPI _refine.pdbx_overall_SU_R_Blow_DPI _refine.pdbx_overall_SU_R_free_Blow_DPI 'X-RAY DIFFRACTION' 5CCD 1 ? 10616 ? ? 3.0 ? ? ? 40.00 2.20 74.7 ? ? 0.203 0.239 0.007 ? 10.000 1035 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'FREE R-VALUE' ? ? 'MOLECULAR REPLACEMENT' ? ? ? RANDOM ? ? ? ? ? ? ? ? ? 'NEUTRON DIFFRACTION' 5CCD 2 ? 7314 ? ? 3.0 ? ? ? 30.02 2.60 76.0 ? ? 0.201 0.214 0.021 ? 9.7 482 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'FREE R-VALUE' ? ? 'MOLECULAR REPLACEMENT' ? ? ? RANDOM ? ? ? ? ? ? ? ? ? # loop_ _refine_analyze.entry_id _refine_analyze.pdbx_refine_id _refine_analyze.Luzzati_coordinate_error_free _refine_analyze.Luzzati_coordinate_error_obs _refine_analyze.Luzzati_d_res_low_free _refine_analyze.Luzzati_d_res_low_obs _refine_analyze.Luzzati_sigma_a_free _refine_analyze.Luzzati_sigma_a_free_details _refine_analyze.Luzzati_sigma_a_obs _refine_analyze.Luzzati_sigma_a_obs_details _refine_analyze.number_disordered_residues _refine_analyze.occupancy_sum_hydrogen _refine_analyze.occupancy_sum_non_hydrogen _refine_analyze.RG_d_res_high _refine_analyze.RG_d_res_low _refine_analyze.RG_free _refine_analyze.RG_work _refine_analyze.RG_free_work_ratio _refine_analyze.pdbx_Luzzati_d_res_high_obs 5CCD 'X-RAY DIFFRACTION' 0.30 0.26 ? 5.00 0.30 ? 0.26 ? ? ? ? ? ? ? ? ? ? 5CCD 'NEUTRON DIFFRACTION' 0.69 0.51 ? 5.00 1.48 ? 1.04 ? ? ? ? ? ? ? ? ? ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1755 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1858 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? ? ? x_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.1 ? ? ? x_angle_deg ? ? 'X-RAY DIFFRACTION' ? 16.7 ? ? ? x_torsion_deg ? ? 'X-RAY DIFFRACTION' ? 0.77 ? ? ? x_torsion_impr_deg ? ? 'NEUTRON DIFFRACTION' ? 0.008 ? ? ? x_bond_d ? ? 'NEUTRON DIFFRACTION' ? 1.1 ? ? ? x_angle_deg ? ? 'NEUTRON DIFFRACTION' ? 16.7 ? ? ? x_torsion_deg ? ? 'NEUTRON DIFFRACTION' ? 0.77 ? ? ? x_torsion_impr_deg ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' 8 2.20 2.30 380 0.248 21.9 0.263 0.041 11.1 42 . . . . 'NEUTRON DIFFRACTION' 8 2.60 2.72 344 0.439 33.0 0.516 0.084 11.0 38 . . . . # _struct.entry_id 5CCD _struct.title 'Joint X-ray/neutron structure of MTAN D198N complex with SAH' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CCD _struct_keywords.text 'Helicobacter pylori, Neutron, S-Adenosylhomocysteine, N-Glycosyl Hydrolases, Hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MQMTN_HELPJ _struct_ref.pdbx_db_accession Q9ZMY2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGS LVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKE FLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5CCD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9ZMY2 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 230 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 230 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5CCD GLY A 1 ? UNP Q9ZMY2 ? ? 'expression tag' -1 1 1 5CCD PRO A 2 ? UNP Q9ZMY2 ? ? 'expression tag' 0 2 1 5CCD GLY A 3 ? UNP Q9ZMY2 ? ? 'expression tag' 1 3 1 5CCD ASN A 200 ? UNP Q9ZMY2 ASP 198 'engineered mutation' 198 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 21890 ? 2 MORE -6 ? 2 'SSA (A^2)' 16170 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 2 1,2 A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 45.0886666667 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 12 ? GLY A 24 ? MET A 10 GLY A 22 1 ? 13 HELX_P HELX_P2 AA2 GLY A 55 ? ALA A 69 ? GLY A 53 ALA A 67 1 ? 15 HELX_P HELX_P3 AA3 LEU A 106 ? ASP A 110 ? LEU A 104 ASP A 108 5 ? 5 HELX_P HELX_P4 AA4 SER A 126 ? GLN A 140 ? SER A 124 GLN A 138 1 ? 15 HELX_P HELX_P5 AA5 SER A 158 ? LYS A 170 ? SER A 156 LYS A 168 1 ? 13 HELX_P HELX_P6 AA6 GLU A 177 ? GLY A 189 ? GLU A 175 GLY A 187 1 ? 13 HELX_P HELX_P7 AA7 LYS A 205 ? LEU A 232 ? LYS A 203 LEU A 230 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA1 8 9 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 28 ? LEU A 32 ? GLU A 26 LEU A 30 AA1 2 ASN A 35 ? VAL A 41 ? ASN A 33 VAL A 39 AA1 3 GLU A 46 ? TYR A 51 ? GLU A 44 TYR A 49 AA1 4 LYS A 5 ? GLY A 10 ? LYS A 3 GLY A 8 AA1 5 LYS A 74 ? SER A 83 ? LYS A 72 SER A 81 AA1 6 ALA A 173 ? GLU A 175 ? ALA A 171 GLU A 173 AA1 7 LEU A 144 ? SER A 151 ? LEU A 142 SER A 149 AA1 8 LEU A 93 ? GLN A 101 ? LEU A 91 GLN A 99 AA1 9 ILE A 123 ? GLU A 124 ? ILE A 121 GLU A 122 AA2 1 GLU A 28 ? LEU A 32 ? GLU A 26 LEU A 30 AA2 2 ASN A 35 ? VAL A 41 ? ASN A 33 VAL A 39 AA2 3 GLU A 46 ? TYR A 51 ? GLU A 44 TYR A 49 AA2 4 LYS A 5 ? GLY A 10 ? LYS A 3 GLY A 8 AA2 5 LYS A 74 ? SER A 83 ? LYS A 72 SER A 81 AA2 6 CYS A 192 ? ASN A 200 ? CYS A 190 ASN A 198 AA2 7 LEU A 93 ? GLN A 101 ? LEU A 91 GLN A 99 AA2 8 ILE A 123 ? GLU A 124 ? ILE A 121 GLU A 122 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 30 ? N ILE A 28 O PHE A 37 ? O PHE A 35 AA1 2 3 N HIS A 38 ? N HIS A 36 O VAL A 49 ? O VAL A 47 AA1 3 4 O GLU A 46 ? O GLU A 44 N ILE A 6 ? N ILE A 4 AA1 4 5 N GLY A 7 ? N GLY A 5 O LYS A 74 ? O LYS A 72 AA1 5 6 N GLY A 82 ? N GLY A 80 O VAL A 174 ? O VAL A 172 AA1 6 7 O GLU A 175 ? O GLU A 173 N ALA A 150 ? N ALA A 148 AA1 7 8 O SER A 151 ? O SER A 149 N VAL A 100 ? N VAL A 98 AA1 8 9 N LEU A 99 ? N LEU A 97 O ILE A 123 ? O ILE A 121 AA2 1 2 N ILE A 30 ? N ILE A 28 O PHE A 37 ? O PHE A 35 AA2 2 3 N HIS A 38 ? N HIS A 36 O VAL A 49 ? O VAL A 47 AA2 3 4 O GLU A 46 ? O GLU A 44 N ILE A 6 ? N ILE A 4 AA2 4 5 N GLY A 7 ? N GLY A 5 O LYS A 74 ? O LYS A 72 AA2 5 6 N PHE A 77 ? N PHE A 75 O LEU A 195 ? O LEU A 193 AA2 6 7 O VAL A 194 ? O VAL A 192 N ALA A 96 ? N ALA A 94 AA2 7 8 N LEU A 99 ? N LEU A 97 O ILE A 123 ? O ILE A 121 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SAH _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 16 _struct_site.details 'binding site for residue SAH A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ALA A 11 ? ALA A 9 . ? 1_555 ? 2 AC1 16 ILE A 54 ? ILE A 52 . ? 1_555 ? 3 AC1 16 VAL A 80 ? VAL A 78 . ? 1_555 ? 4 AC1 16 ALA A 81 ? ALA A 79 . ? 1_555 ? 5 AC1 16 GLY A 82 ? GLY A 80 . ? 1_555 ? 6 AC1 16 GLN A 154 ? GLN A 152 . ? 1_555 ? 7 AC1 16 PHE A 155 ? PHE A 153 . ? 1_555 ? 8 AC1 16 VAL A 156 ? VAL A 154 . ? 1_555 ? 9 AC1 16 VAL A 174 ? VAL A 172 . ? 1_555 ? 10 AC1 16 GLU A 175 ? GLU A 173 . ? 1_555 ? 11 AC1 16 MET A 176 ? MET A 174 . ? 1_555 ? 12 AC1 16 GLU A 177 ? GLU A 175 . ? 1_555 ? 13 AC1 16 ARG A 196 ? ARG A 194 . ? 1_555 ? 14 AC1 16 ASN A 200 ? ASN A 198 . ? 1_555 ? 15 AC1 16 PHE A 210 ? PHE A 208 . ? 1_555 ? 16 AC1 16 DOD C . ? DOD A 448 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ASP 24 ? ? D2 A DOD 401 ? ? 1.50 2 1 D A ARG 11 ? A O A DOD 402 ? ? 1.56 3 1 H A ARG 11 ? B O A DOD 402 ? ? 1.56 4 1 D2 A DOD 455 ? ? O A DOD 460 ? ? 1.59 5 1 O A GLU 173 ? ? D2 A DOD 404 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 40 ? ? -162.62 108.73 2 1 ALA A 48 ? ? 179.85 155.30 3 1 LYS A 51 ? ? 91.89 168.92 4 1 ASN A 89 ? ? 73.13 -2.43 5 1 SER A 117 ? ? -134.40 -158.75 6 1 ASP A 151 ? ? -95.40 37.65 7 1 HIS A 155 ? ? -141.24 52.71 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A DOD 449 ? C DOD . 2 1 A DOD 468 ? C DOD . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id DOD _pdbx_distant_solvent_atoms.auth_seq_id 477 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.18 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A PRO 0 ? A PRO 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DOD O O N N 88 DOD D1 D N N 89 DOD D2 D N N 90 GLN N N N N 91 GLN CA C N S 92 GLN C C N N 93 GLN O O N N 94 GLN CB C N N 95 GLN CG C N N 96 GLN CD C N N 97 GLN OE1 O N N 98 GLN NE2 N N N 99 GLN OXT O N N 100 GLN H H N N 101 GLN H2 H N N 102 GLN HA H N N 103 GLN HB2 H N N 104 GLN HB3 H N N 105 GLN HG2 H N N 106 GLN HG3 H N N 107 GLN HE21 H N N 108 GLN HE22 H N N 109 GLN HXT H N N 110 GLU N N N N 111 GLU CA C N S 112 GLU C C N N 113 GLU O O N N 114 GLU CB C N N 115 GLU CG C N N 116 GLU CD C N N 117 GLU OE1 O N N 118 GLU OE2 O N N 119 GLU OXT O N N 120 GLU H H N N 121 GLU H2 H N N 122 GLU HA H N N 123 GLU HB2 H N N 124 GLU HB3 H N N 125 GLU HG2 H N N 126 GLU HG3 H N N 127 GLU HE2 H N N 128 GLU HXT H N N 129 GLY N N N N 130 GLY CA C N N 131 GLY C C N N 132 GLY O O N N 133 GLY OXT O N N 134 GLY H H N N 135 GLY H2 H N N 136 GLY HA2 H N N 137 GLY HA3 H N N 138 GLY HXT H N N 139 HIS N N N N 140 HIS CA C N S 141 HIS C C N N 142 HIS O O N N 143 HIS CB C N N 144 HIS CG C Y N 145 HIS ND1 N Y N 146 HIS CD2 C Y N 147 HIS CE1 C Y N 148 HIS NE2 N Y N 149 HIS OXT O N N 150 HIS H H N N 151 HIS H2 H N N 152 HIS HA H N N 153 HIS HB2 H N N 154 HIS HB3 H N N 155 HIS HD1 H N N 156 HIS HD2 H N N 157 HIS HE1 H N N 158 HIS HE2 H N N 159 HIS HXT H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SAH N N N N 290 SAH CA C N S 291 SAH CB C N N 292 SAH CG C N N 293 SAH SD S N N 294 SAH C C N N 295 SAH O O N N 296 SAH OXT O N N 297 SAH "C5'" C N N 298 SAH "C4'" C N S 299 SAH "O4'" O N N 300 SAH "C3'" C N S 301 SAH "O3'" O N N 302 SAH "C2'" C N R 303 SAH "O2'" O N N 304 SAH "C1'" C N R 305 SAH N9 N Y N 306 SAH C8 C Y N 307 SAH N7 N Y N 308 SAH C5 C Y N 309 SAH C6 C Y N 310 SAH N6 N N N 311 SAH N1 N Y N 312 SAH C2 C Y N 313 SAH N3 N Y N 314 SAH C4 C Y N 315 SAH HN1 H N N 316 SAH HN2 H N N 317 SAH HA H N N 318 SAH HB1 H N N 319 SAH HB2 H N N 320 SAH HG1 H N N 321 SAH HG2 H N N 322 SAH HXT H N N 323 SAH "H5'1" H N N 324 SAH "H5'2" H N N 325 SAH "H4'" H N N 326 SAH "H3'" H N N 327 SAH "HO3'" H N N 328 SAH "H2'" H N N 329 SAH "HO2'" H N N 330 SAH "H1'" H N N 331 SAH H8 H N N 332 SAH HN61 H N N 333 SAH HN62 H N N 334 SAH H2 H N N 335 SER N N N N 336 SER CA C N S 337 SER C C N N 338 SER O O N N 339 SER CB C N N 340 SER OG O N N 341 SER OXT O N N 342 SER H H N N 343 SER H2 H N N 344 SER HA H N N 345 SER HB2 H N N 346 SER HB3 H N N 347 SER HG H N N 348 SER HXT H N N 349 THR N N N N 350 THR CA C N S 351 THR C C N N 352 THR O O N N 353 THR CB C N R 354 THR OG1 O N N 355 THR CG2 C N N 356 THR OXT O N N 357 THR H H N N 358 THR H2 H N N 359 THR HA H N N 360 THR HB H N N 361 THR HG1 H N N 362 THR HG21 H N N 363 THR HG22 H N N 364 THR HG23 H N N 365 THR HXT H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DOD O D1 sing N N 83 DOD O D2 sing N N 84 GLN N CA sing N N 85 GLN N H sing N N 86 GLN N H2 sing N N 87 GLN CA C sing N N 88 GLN CA CB sing N N 89 GLN CA HA sing N N 90 GLN C O doub N N 91 GLN C OXT sing N N 92 GLN CB CG sing N N 93 GLN CB HB2 sing N N 94 GLN CB HB3 sing N N 95 GLN CG CD sing N N 96 GLN CG HG2 sing N N 97 GLN CG HG3 sing N N 98 GLN CD OE1 doub N N 99 GLN CD NE2 sing N N 100 GLN NE2 HE21 sing N N 101 GLN NE2 HE22 sing N N 102 GLN OXT HXT sing N N 103 GLU N CA sing N N 104 GLU N H sing N N 105 GLU N H2 sing N N 106 GLU CA C sing N N 107 GLU CA CB sing N N 108 GLU CA HA sing N N 109 GLU C O doub N N 110 GLU C OXT sing N N 111 GLU CB CG sing N N 112 GLU CB HB2 sing N N 113 GLU CB HB3 sing N N 114 GLU CG CD sing N N 115 GLU CG HG2 sing N N 116 GLU CG HG3 sing N N 117 GLU CD OE1 doub N N 118 GLU CD OE2 sing N N 119 GLU OE2 HE2 sing N N 120 GLU OXT HXT sing N N 121 GLY N CA sing N N 122 GLY N H sing N N 123 GLY N H2 sing N N 124 GLY CA C sing N N 125 GLY CA HA2 sing N N 126 GLY CA HA3 sing N N 127 GLY C O doub N N 128 GLY C OXT sing N N 129 GLY OXT HXT sing N N 130 HIS N CA sing N N 131 HIS N H sing N N 132 HIS N H2 sing N N 133 HIS CA C sing N N 134 HIS CA CB sing N N 135 HIS CA HA sing N N 136 HIS C O doub N N 137 HIS C OXT sing N N 138 HIS CB CG sing N N 139 HIS CB HB2 sing N N 140 HIS CB HB3 sing N N 141 HIS CG ND1 sing Y N 142 HIS CG CD2 doub Y N 143 HIS ND1 CE1 doub Y N 144 HIS ND1 HD1 sing N N 145 HIS CD2 NE2 sing Y N 146 HIS CD2 HD2 sing N N 147 HIS CE1 NE2 sing Y N 148 HIS CE1 HE1 sing N N 149 HIS NE2 HE2 sing N N 150 HIS OXT HXT sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SAH N CA sing N N 277 SAH N HN1 sing N N 278 SAH N HN2 sing N N 279 SAH CA CB sing N N 280 SAH CA C sing N N 281 SAH CA HA sing N N 282 SAH CB CG sing N N 283 SAH CB HB1 sing N N 284 SAH CB HB2 sing N N 285 SAH CG SD sing N N 286 SAH CG HG1 sing N N 287 SAH CG HG2 sing N N 288 SAH SD "C5'" sing N N 289 SAH C O doub N N 290 SAH C OXT sing N N 291 SAH OXT HXT sing N N 292 SAH "C5'" "C4'" sing N N 293 SAH "C5'" "H5'1" sing N N 294 SAH "C5'" "H5'2" sing N N 295 SAH "C4'" "O4'" sing N N 296 SAH "C4'" "C3'" sing N N 297 SAH "C4'" "H4'" sing N N 298 SAH "O4'" "C1'" sing N N 299 SAH "C3'" "O3'" sing N N 300 SAH "C3'" "C2'" sing N N 301 SAH "C3'" "H3'" sing N N 302 SAH "O3'" "HO3'" sing N N 303 SAH "C2'" "O2'" sing N N 304 SAH "C2'" "C1'" sing N N 305 SAH "C2'" "H2'" sing N N 306 SAH "O2'" "HO2'" sing N N 307 SAH "C1'" N9 sing N N 308 SAH "C1'" "H1'" sing N N 309 SAH N9 C8 sing Y N 310 SAH N9 C4 sing Y N 311 SAH C8 N7 doub Y N 312 SAH C8 H8 sing N N 313 SAH N7 C5 sing Y N 314 SAH C5 C6 sing Y N 315 SAH C5 C4 doub Y N 316 SAH C6 N6 sing N N 317 SAH C6 N1 doub Y N 318 SAH N6 HN61 sing N N 319 SAH N6 HN62 sing N N 320 SAH N1 C2 sing Y N 321 SAH C2 N3 doub Y N 322 SAH C2 H2 sing N N 323 SAH N3 C4 sing Y N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TYR N CA sing N N 354 TYR N H sing N N 355 TYR N H2 sing N N 356 TYR CA C sing N N 357 TYR CA CB sing N N 358 TYR CA HA sing N N 359 TYR C O doub N N 360 TYR C OXT sing N N 361 TYR CB CG sing N N 362 TYR CB HB2 sing N N 363 TYR CB HB3 sing N N 364 TYR CG CD1 doub Y N 365 TYR CG CD2 sing Y N 366 TYR CD1 CE1 sing Y N 367 TYR CD1 HD1 sing N N 368 TYR CD2 CE2 doub Y N 369 TYR CD2 HD2 sing N N 370 TYR CE1 CZ doub Y N 371 TYR CE1 HE1 sing N N 372 TYR CE2 CZ sing Y N 373 TYR CE2 HE2 sing N N 374 TYR CZ OH sing N N 375 TYR OH HH sing N N 376 TYR OXT HXT sing N N 377 VAL N CA sing N N 378 VAL N H sing N N 379 VAL N H2 sing N N 380 VAL CA C sing N N 381 VAL CA CB sing N N 382 VAL CA HA sing N N 383 VAL C O doub N N 384 VAL C OXT sing N N 385 VAL CB CG1 sing N N 386 VAL CB CG2 sing N N 387 VAL CB HB sing N N 388 VAL CG1 HG11 sing N N 389 VAL CG1 HG12 sing N N 390 VAL CG1 HG13 sing N N 391 VAL CG2 HG21 sing N N 392 VAL CG2 HG22 sing N N 393 VAL CG2 HG23 sing N N 394 VAL OXT HXT sing N N 395 # _pdbx_audit_support.funding_organization 'National Aeronautic Space Administration (NASA, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number N-123528-01 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5CCD _atom_sites.fract_transf_matrix[1][1] 0.012021 _atom_sites.fract_transf_matrix[1][2] 0.006940 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013880 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014786 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C D H N O S # loop_