HEADER ISOMERASE 04-JUL-15 5CDR TITLE 2.65 STRUCTURE OF S.AUREUS DNA GYRASE AND ARTIFICIALLY NICKED DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA GYRASE SUBUNIT A; COMPND 3 CHAIN: A, C; COMPND 4 EC: 5.99.1.3; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA GYRASE SUBUNIT B,DNA GYRASE SUBUNIT B; COMPND 9 CHAIN: B, D; COMPND 10 EC: 5.99.1.3,5.99.1.3; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*)-3'); COMPND 15 CHAIN: E; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: DNA (5'-D(*GP*GP*TP*AP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3'); COMPND 19 CHAIN: G; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: DNA (5'- COMPND 23 D(*AP*GP*CP*CP*GP*TP*AP*GP*GP*TP*AP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3'); COMPND 24 CHAIN: F; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN N315); SOURCE 3 ORGANISM_TAXID: 158879; SOURCE 4 STRAIN: N315; SOURCE 5 GENE: GYRA, SA0006; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN N315); SOURCE 10 ORGANISM_TAXID: 158879; SOURCE 11 STRAIN: N315; SOURCE 12 GENE: GYRB, SA0005; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630; SOURCE 19 MOL_ID: 4; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630; SOURCE 23 MOL_ID: 5; SOURCE 24 SYNTHETIC: YES; SOURCE 25 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 26 ORGANISM_TAXID: 32630 KEYWDS TYPE IIA TOPOISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.D.BAX,V.SRIKANNATHASAN,P.F.CHAN REVDAT 2 10-JAN-24 5CDR 1 LINK REVDAT 1 16-DEC-15 5CDR 0 JRNL AUTH P.F.CHAN,V.SRIKANNATHASAN,J.HUANG,H.CUI,A.P.FOSBERRY,M.GU, JRNL AUTH 2 M.M.HANN,M.HIBBS,P.HOMES,K.INGRAHAM,J.PIZZOLLO,C.SHEN, JRNL AUTH 3 A.J.SHILLINGS,C.E.SPITZFADEN,R.TANNER,A.J.THEOBALD, JRNL AUTH 4 R.A.STAVENGER,B.D.BAX,M.N.GWYNN JRNL TITL STRUCTURAL BASIS OF DNA GYRASE INHIBITION BY ANTIBACTERIAL JRNL TITL 2 QPT-1, ANTICANCER DRUG ETOPOSIDE AND MOXIFLOXACIN. JRNL REF NAT COMMUN V. 6 10048 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26640131 JRNL DOI 10.1038/NCOMMS10048 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH V.SRIKANNATHASAN,A.WOHLKONIG,A.SHILLINGS,O.SINGH,P.F.CHAN, REMARK 1 AUTH 2 J.HUANG,M.N.GWYNN,A.P.FOSBERRY,P.HOMES,M.HIBBS,A.J.THEOBALD, REMARK 1 AUTH 3 C.SPITZFADEN,B.D.BAX REMARK 1 TITL CRYSTALLIZATION AND INITIAL CRYSTALLOGRAPHIC ANALYSIS OF REMARK 1 TITL 2 COVALENT DNA-CLEAVAGE COMPLEXES OF STAPHYLOCCOCUS AUREUS DNA REMARK 1 TITL 3 GYRASE WITH QPT-1, MOXIFLOXACIN AND ETOPOSIDE. REMARK 1 REF ACTA CRYSTALLOGR F STRUCT V. 71 1242 2015 REMARK 1 REF 2 BIOL COMMUN REMARK 1 REFN ESSN 2053-230X REMARK 1 PMID 26457513 REMARK 1 DOI 10.1107/S2053230X15015290 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.11.5 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 58050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2379 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.33 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4310 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2244 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4114 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE : 0.2542 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.55 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 196 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10624 REMARK 3 NUCLEIC ACID ATOMS : 732 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 644 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.08280 REMARK 3 B22 (A**2) : 3.08280 REMARK 3 B33 (A**2) : -6.16560 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.332 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.615 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.254 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.609 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.257 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 12056 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 16451 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 4409 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 348 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1682 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 12056 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1581 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 14011 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.98 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.10 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.95 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { B|417 - B|608 } REMARK 3 ORIGIN FOR THE GROUP (A): 13.6622 54.0813 64.0002 REMARK 3 T TENSOR REMARK 3 T11: -0.0357 T22: -0.0374 REMARK 3 T33: -0.0554 T12: 0.0224 REMARK 3 T13: -0.0323 T23: -0.1668 REMARK 3 L TENSOR REMARK 3 L11: 2.8057 L22: 1.3336 REMARK 3 L33: 1.5789 L12: 0.2858 REMARK 3 L13: -0.9452 L23: -0.1883 REMARK 3 S TENSOR REMARK 3 S11: 0.1119 S12: -0.5163 S13: 0.3801 REMARK 3 S21: 0.0561 S22: -0.0411 S23: 0.3148 REMARK 3 S31: -0.1056 S32: 0.0104 S33: -0.0708 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|29 - A|244 A|328 - A|369 A|461 - A|491 } REMARK 3 ORIGIN FOR THE GROUP (A): 30.1919 28.8385 34.2676 REMARK 3 T TENSOR REMARK 3 T11: -0.0137 T22: -0.1295 REMARK 3 T33: -0.0058 T12: 0.0319 REMARK 3 T13: -0.0236 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 0.9932 L22: 0.7348 REMARK 3 L33: 1.1268 L12: 0.2337 REMARK 3 L13: -0.0744 L23: 0.0980 REMARK 3 S TENSOR REMARK 3 S11: -0.0102 S12: -0.0166 S13: -0.1477 REMARK 3 S21: 0.0548 S22: 0.0169 S23: -0.0008 REMARK 3 S31: -0.0156 S32: -0.0191 S33: -0.0067 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|374 - A|379 A|451 - A|460 } REMARK 3 ORIGIN FOR THE GROUP (A): 29.6522 -2.6012 40.2899 REMARK 3 T TENSOR REMARK 3 T11: 0.0028 T22: -0.1920 REMARK 3 T33: 0.1270 T12: 0.0551 REMARK 3 T13: -0.0082 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: -1.0522 L22: 3.2461 REMARK 3 L33: 0.0464 L12: 0.1726 REMARK 3 L13: -0.3551 L23: -0.1542 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: 0.0352 S13: 0.0033 REMARK 3 S21: 0.0034 S22: -0.0436 S23: -0.0821 REMARK 3 S31: 0.0515 S32: 0.0607 S33: 0.0403 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|380 - A|450 } REMARK 3 ORIGIN FOR THE GROUP (A): 11.8333 -13.4987 45.7499 REMARK 3 T TENSOR REMARK 3 T11: 0.0952 T22: -0.1931 REMARK 3 T33: -0.0418 T12: 0.0371 REMARK 3 T13: -0.0192 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 5.0458 L22: 1.7495 REMARK 3 L33: 0.0000 L12: 1.1271 REMARK 3 L13: 1.6787 L23: -0.0367 REMARK 3 S TENSOR REMARK 3 S11: 0.0688 S12: -0.0937 S13: -0.1423 REMARK 3 S21: -0.0839 S22: 0.0130 S23: -0.2419 REMARK 3 S31: 0.1304 S32: -0.1952 S33: -0.0818 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|9 - A|28 B|609 - B|640 } REMARK 3 ORIGIN FOR THE GROUP (A): 33.0242 46.6790 61.8496 REMARK 3 T TENSOR REMARK 3 T11: 0.0029 T22: -0.0035 REMARK 3 T33: -0.0777 T12: 0.0172 REMARK 3 T13: -0.0506 T23: -0.0910 REMARK 3 L TENSOR REMARK 3 L11: 1.7526 L22: 1.9492 REMARK 3 L33: 2.7170 L12: -1.0571 REMARK 3 L13: 1.7230 L23: 1.0989 REMARK 3 S TENSOR REMARK 3 S11: 0.0140 S12: -0.2413 S13: 0.0190 REMARK 3 S21: 0.1198 S22: 0.0023 S23: -0.1478 REMARK 3 S31: 0.0869 S32: 0.1430 S33: -0.0163 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { D|417 - D|608 } REMARK 3 ORIGIN FOR THE GROUP (A): -1.1018 54.0977 16.1535 REMARK 3 T TENSOR REMARK 3 T11: -0.0068 T22: -0.0202 REMARK 3 T33: -0.0914 T12: 0.0756 REMARK 3 T13: -0.0517 T23: 0.1457 REMARK 3 L TENSOR REMARK 3 L11: 3.1690 L22: 1.5268 REMARK 3 L33: 0.8987 L12: -0.3199 REMARK 3 L13: -0.2162 L23: -0.2027 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: 0.4563 S13: 0.5457 REMARK 3 S21: -0.0741 S22: -0.0145 S23: -0.2003 REMARK 3 S31: -0.1851 S32: 0.0648 S33: 0.0735 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { C|29 - C|244 C|328 - C|329 C|461 - C|490 } REMARK 3 ORIGIN FOR THE GROUP (A): -18.8910 33.5079 48.0064 REMARK 3 T TENSOR REMARK 3 T11: -0.0098 T22: -0.1051 REMARK 3 T33: 0.0109 T12: 0.0743 REMARK 3 T13: -0.0203 T23: -0.0628 REMARK 3 L TENSOR REMARK 3 L11: 1.1948 L22: 0.2658 REMARK 3 L33: 1.0342 L12: -0.1398 REMARK 3 L13: -0.3118 L23: -0.0077 REMARK 3 S TENSOR REMARK 3 S11: -0.0482 S12: -0.0228 S13: -0.1427 REMARK 3 S21: -0.0382 S22: -0.0568 S23: 0.0442 REMARK 3 S31: -0.0243 S32: 0.0140 S33: 0.1050 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: { C|373 - C|379 C|451 - C|460 } REMARK 3 ORIGIN FOR THE GROUP (A): -22.5788 2.1091 43.7483 REMARK 3 T TENSOR REMARK 3 T11: -0.0219 T22: -0.2430 REMARK 3 T33: 0.0920 T12: 0.0373 REMARK 3 T13: 0.0377 T23: -0.1462 REMARK 3 L TENSOR REMARK 3 L11: 0.2496 L22: 2.0010 REMARK 3 L33: 0.9281 L12: 0.1970 REMARK 3 L13: 1.3773 L23: 0.6510 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: -0.0216 S13: 0.0286 REMARK 3 S21: -0.0059 S22: -0.0294 S23: 0.0719 REMARK 3 S31: 0.0619 S32: -0.0542 S33: -0.0211 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: { C|380 - C|450 } REMARK 3 ORIGIN FOR THE GROUP (A): -7.2385 -12.1410 40.5214 REMARK 3 T TENSOR REMARK 3 T11: 0.0964 T22: -0.2074 REMARK 3 T33: -0.0320 T12: 0.0068 REMARK 3 T13: -0.0410 T23: -0.0727 REMARK 3 L TENSOR REMARK 3 L11: 4.5060 L22: 2.2483 REMARK 3 L33: 0.9987 L12: -0.2079 REMARK 3 L13: -0.7848 L23: -0.4856 REMARK 3 S TENSOR REMARK 3 S11: 0.0554 S12: -0.1030 S13: -0.2194 REMARK 3 S21: -0.0060 S22: -0.0676 S23: 0.0250 REMARK 3 S31: 0.0751 S32: 0.1510 S33: 0.0123 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: { C|10 - C|28 D|609 - D|639 } REMARK 3 ORIGIN FOR THE GROUP (A): -21.2998 49.4033 18.6792 REMARK 3 T TENSOR REMARK 3 T11: 0.0142 T22: 0.0605 REMARK 3 T33: -0.0973 T12: 0.1300 REMARK 3 T13: -0.0833 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 2.1613 L22: 0.8397 REMARK 3 L33: 3.5508 L12: -0.3888 REMARK 3 L13: 2.0300 L23: -1.0067 REMARK 3 S TENSOR REMARK 3 S11: -0.0450 S12: 0.2229 S13: 0.0929 REMARK 3 S21: -0.0620 S22: 0.0061 S23: 0.0544 REMARK 3 S31: 0.0541 S32: -0.1243 S33: 0.0389 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: { E|1 - E|8 F|2013 - F|2019 } REMARK 3 ORIGIN FOR THE GROUP (A): 26.3111 49.9718 41.8003 REMARK 3 T TENSOR REMARK 3 T11: 0.0023 T22: -0.1548 REMARK 3 T33: -0.0234 T12: -0.0167 REMARK 3 T13: -0.0275 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: -0.2821 L22: 4.3220 REMARK 3 L33: 2.0815 L12: 0.7683 REMARK 3 L13: 0.1472 L23: 0.8697 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: 0.0826 S13: 0.1340 REMARK 3 S21: -0.1568 S22: -0.0135 S23: 0.0216 REMARK 3 S31: -0.1064 S32: -0.0314 S33: 0.0373 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: { E|2009 - E|2020 F|2 - F|8 } REMARK 3 ORIGIN FOR THE GROUP (A): -10.0486 52.7322 39.0976 REMARK 3 T TENSOR REMARK 3 T11: -0.0986 T22: -0.1989 REMARK 3 T33: -0.0808 T12: 0.1503 REMARK 3 T13: -0.0902 T23: -0.1090 REMARK 3 L TENSOR REMARK 3 L11: -0.1265 L22: 2.1187 REMARK 3 L33: 2.1830 L12: 1.2700 REMARK 3 L13: 0.0195 L23: -0.9353 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: -0.0777 S13: 0.1753 REMARK 3 S21: 0.1597 S22: 0.0132 S23: -0.1079 REMARK 3 S31: -0.1907 S32: 0.2065 S33: -0.0159 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CDR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211449. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58268 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.46300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 2XCS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150MM BISTRIS PH 6.2, 11% PEG 5000 REMARK 280 MME., MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 136.86100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 273.72200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 205.29150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 342.15250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 68.43050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -121.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, G, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE C 9 REMARK 465 GLY C 491 REMARK 465 ALA D 640 REMARK 465 DG G 2008 REMARK 465 DG F 2009 REMARK 465 DT F 2010 REMARK 465 DA F 2011 REMARK 465 DC F 2012 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 9 CG1 CG2 CD1 REMARK 470 LYS B 417 CG CD CE NZ REMARK 470 ARG B 458 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 417 CG CD CE NZ REMARK 470 LYS D 607 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC G2012 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT G2014 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC G2019 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT F2014 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC F2019 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC F2019 C3' - O3' - P ANGL. DEV. = 8.0 DEGREES REMARK 500 DT F2020 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT F2020 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 33 -74.21 -160.08 REMARK 500 MET A 58 46.40 -87.08 REMARK 500 TYR A 78 -33.44 -134.98 REMARK 500 ALA A 162 76.70 44.60 REMARK 500 ALA A 176 -146.23 -101.91 REMARK 500 ASN A 182 89.46 -150.52 REMARK 500 ALA A 221 -113.13 59.26 REMARK 500 ASP A 311 -2.99 74.63 REMARK 500 ASN A 334 84.64 -151.09 REMARK 500 SER B 449 -6.73 -55.48 REMARK 500 ALA B 509 46.88 -77.60 REMARK 500 ARG C 33 -73.95 -160.06 REMARK 500 MET C 58 46.59 -86.92 REMARK 500 TYR C 78 -33.36 -135.28 REMARK 500 ALA C 162 76.81 44.61 REMARK 500 ALA C 176 -146.36 -101.84 REMARK 500 ASN C 182 89.35 -150.44 REMARK 500 ALA C 221 -113.18 59.69 REMARK 500 ASP C 311 -3.32 74.22 REMARK 500 ASN C 334 84.52 -151.36 REMARK 500 SER D 449 -6.77 -55.41 REMARK 500 ALA D 509 49.16 -77.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 322 O REMARK 620 2 THR A 325 O 93.1 REMARK 620 3 GLN A 328 O 110.2 94.4 REMARK 620 4 HOH A 705 O 74.8 167.5 87.2 REMARK 620 5 HOH A 809 O 152.0 86.9 97.7 105.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 701 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 508 OD2 REMARK 620 2 ASP B 510 OD2 104.5 REMARK 620 3 HOH B 818 O 103.7 95.2 REMARK 620 4 HOH B 842 O 83.6 167.9 91.4 REMARK 620 5 HOH B 848 O 92.7 86.6 162.5 84.1 REMARK 620 6 HOH E 211 O 170.2 84.4 79.3 87.0 83.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1001 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 508 OD2 REMARK 620 2 ASP D 510 OD2 105.8 REMARK 620 3 HOH D1108 O 108.6 91.6 REMARK 620 4 HOH D1110 O 98.8 73.2 151.6 REMARK 620 5 HOH D1116 O 171.8 77.6 78.5 74.8 REMARK 620 6 HOH D1130 O 92.4 158.3 93.5 92.8 82.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN D 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL G 2101 DBREF 5CDR A 9 491 UNP Q99XG5 GYRA_STAAN 9 491 DBREF 5CDR B 417 543 UNP P66937 GYRB_STAAN 417 543 DBREF 5CDR B 580 640 UNP P66937 GYRB_STAAN 580 640 DBREF 5CDR C 9 491 UNP Q99XG5 GYRA_STAAN 9 491 DBREF 5CDR D 417 543 UNP P66937 GYRB_STAAN 417 543 DBREF 5CDR D 580 640 UNP P66937 GYRB_STAAN 580 640 DBREF 5CDR E 1 8 PDB 5CDR 5CDR 1 8 DBREF 5CDR G 2008 2020 PDB 5CDR 5CDR 2008 2020 DBREF 5CDR F 1 2020 PDB 5CDR 5CDR 1 2020 SEQADV 5CDR PHE A 123 UNP Q99XG5 TYR 123 ENGINEERED MUTATION SEQADV 5CDR THR B 544 UNP P66937 LINKER SEQADV 5CDR GLY B 545 UNP P66937 LINKER SEQADV 5CDR PHE C 123 UNP Q99XG5 TYR 123 ENGINEERED MUTATION SEQADV 5CDR THR D 544 UNP P66937 LINKER SEQADV 5CDR GLY D 545 UNP P66937 LINKER SEQRES 1 A 483 ILE ASN GLU ARG ASN ILE THR SER GLU MET ARG GLU SER SEQRES 2 A 483 PHE LEU ASP TYR ALA MET SER VAL ILE VAL ALA ARG ALA SEQRES 3 A 483 LEU PRO ASP VAL ARG ASP GLY LEU LYS PRO VAL HIS ARG SEQRES 4 A 483 ARG ILE LEU TYR GLY LEU ASN GLU GLN GLY MET THR PRO SEQRES 5 A 483 ASP LYS SER TYR LYS LYS SER ALA ARG ILE VAL GLY ASP SEQRES 6 A 483 VAL MET GLY LYS TYR HIS PRO HIS GLY ASP SER SER ILE SEQRES 7 A 483 TYR GLU ALA MET VAL ARG MET ALA GLN ASP PHE SER TYR SEQRES 8 A 483 ARG TYR PRO LEU VAL ASP GLY GLN GLY ASN PHE GLY SER SEQRES 9 A 483 MET ASP GLY ASP GLY ALA ALA ALA MET ARG PHE THR GLU SEQRES 10 A 483 ALA ARG MET THR LYS ILE THR LEU GLU LEU LEU ARG ASP SEQRES 11 A 483 ILE ASN LYS ASP THR ILE ASP PHE ILE ASP ASN TYR ASP SEQRES 12 A 483 GLY ASN GLU ARG GLU PRO SER VAL LEU PRO ALA ARG PHE SEQRES 13 A 483 PRO ASN LEU LEU ALA ASN GLY ALA SER GLY ILE ALA VAL SEQRES 14 A 483 GLY MET ALA THR ASN ILE PRO PRO HIS ASN LEU THR GLU SEQRES 15 A 483 LEU ILE ASN GLY VAL LEU SER LEU SER LYS ASN PRO ASP SEQRES 16 A 483 ILE SER ILE ALA GLU LEU MET GLU ASP ILE GLU GLY PRO SEQRES 17 A 483 ASP PHE PRO THR ALA GLY LEU ILE LEU GLY LYS SER GLY SEQRES 18 A 483 ILE ARG ARG ALA TYR GLU THR GLY ARG GLY SER ILE GLN SEQRES 19 A 483 MET ARG SER ARG ALA VAL ILE GLU GLU ARG GLY GLY GLY SEQRES 20 A 483 ARG GLN ARG ILE VAL VAL THR GLU ILE PRO PHE GLN VAL SEQRES 21 A 483 ASN LYS ALA ARG MET ILE GLU LYS ILE ALA GLU LEU VAL SEQRES 22 A 483 ARG ASP LYS LYS ILE ASP GLY ILE THR ASP LEU ARG ASP SEQRES 23 A 483 GLU THR SER LEU ARG THR GLY VAL ARG VAL VAL ILE ASP SEQRES 24 A 483 VAL ARG LYS ASP ALA ASN ALA SER VAL ILE LEU ASN ASN SEQRES 25 A 483 LEU TYR LYS GLN THR PRO LEU GLN THR SER PHE GLY VAL SEQRES 26 A 483 ASN MET ILE ALA LEU VAL ASN GLY ARG PRO LYS LEU ILE SEQRES 27 A 483 ASN LEU LYS GLU ALA LEU VAL HIS TYR LEU GLU HIS GLN SEQRES 28 A 483 LYS THR VAL VAL ARG ARG ARG THR GLN TYR ASN LEU ARG SEQRES 29 A 483 LYS ALA LYS ASP ARG ALA HIS ILE LEU GLU GLY LEU ARG SEQRES 30 A 483 ILE ALA LEU ASP HIS ILE ASP GLU ILE ILE SER THR ILE SEQRES 31 A 483 ARG GLU SER ASP THR ASP LYS VAL ALA MET GLU SER LEU SEQRES 32 A 483 GLN GLN ARG PHE LYS LEU SER GLU LYS GLN ALA GLN ALA SEQRES 33 A 483 ILE LEU ASP MET ARG LEU ARG ARG LEU THR GLY LEU GLU SEQRES 34 A 483 ARG ASP LYS ILE GLU ALA GLU TYR ASN GLU LEU LEU ASN SEQRES 35 A 483 TYR ILE SER GLU LEU GLU THR ILE LEU ALA ASP GLU GLU SEQRES 36 A 483 VAL LEU LEU GLN LEU VAL ARG ASP GLU LEU THR GLU ILE SEQRES 37 A 483 ARG ASP ARG PHE GLY ASP ASP ARG ARG THR GLU ILE GLN SEQRES 38 A 483 LEU GLY SEQRES 1 B 190 LYS LEU ALA ASP CYS SER SER LYS SER PRO GLU GLU CYS SEQRES 2 B 190 GLU ILE PHE LEU VAL GLU GLY ASP SER ALA GLY GLY SER SEQRES 3 B 190 THR LYS SER GLY ARG ASP SER ARG THR GLN ALA ILE LEU SEQRES 4 B 190 PRO LEU ARG GLY LYS ILE LEU ASN VAL GLU LYS ALA ARG SEQRES 5 B 190 LEU ASP ARG ILE LEU ASN ASN ASN GLU ILE ARG GLN MET SEQRES 6 B 190 ILE THR ALA PHE GLY THR GLY ILE GLY GLY ASP PHE ASP SEQRES 7 B 190 LEU ALA LYS ALA ARG TYR HIS LYS ILE VAL ILE MET THR SEQRES 8 B 190 ASP ALA ASP VAL ASP GLY ALA HIS ILE ARG THR LEU LEU SEQRES 9 B 190 LEU THR PHE PHE TYR ARG PHE MET ARG PRO LEU ILE GLU SEQRES 10 B 190 ALA GLY TYR VAL TYR ILE ALA GLN PRO PRO THR GLY TYR SEQRES 11 B 190 LYS GLY LEU GLY GLU MET ASN ALA ASP GLN LEU TRP GLU SEQRES 12 B 190 THR THR MET ASN PRO GLU HIS ARG ALA LEU LEU GLN VAL SEQRES 13 B 190 LYS LEU GLU ASP ALA ILE GLU ALA ASP GLN THR PHE GLU SEQRES 14 B 190 MET LEU MET GLY ASP VAL VAL GLU ASN ARG ARG GLN PHE SEQRES 15 B 190 ILE GLU ASP ASN ALA VAL TYR ALA SEQRES 1 C 483 ILE ASN GLU ARG ASN ILE THR SER GLU MET ARG GLU SER SEQRES 2 C 483 PHE LEU ASP TYR ALA MET SER VAL ILE VAL ALA ARG ALA SEQRES 3 C 483 LEU PRO ASP VAL ARG ASP GLY LEU LYS PRO VAL HIS ARG SEQRES 4 C 483 ARG ILE LEU TYR GLY LEU ASN GLU GLN GLY MET THR PRO SEQRES 5 C 483 ASP LYS SER TYR LYS LYS SER ALA ARG ILE VAL GLY ASP SEQRES 6 C 483 VAL MET GLY LYS TYR HIS PRO HIS GLY ASP SER SER ILE SEQRES 7 C 483 TYR GLU ALA MET VAL ARG MET ALA GLN ASP PHE SER TYR SEQRES 8 C 483 ARG TYR PRO LEU VAL ASP GLY GLN GLY ASN PHE GLY SER SEQRES 9 C 483 MET ASP GLY ASP GLY ALA ALA ALA MET ARG PHE THR GLU SEQRES 10 C 483 ALA ARG MET THR LYS ILE THR LEU GLU LEU LEU ARG ASP SEQRES 11 C 483 ILE ASN LYS ASP THR ILE ASP PHE ILE ASP ASN TYR ASP SEQRES 12 C 483 GLY ASN GLU ARG GLU PRO SER VAL LEU PRO ALA ARG PHE SEQRES 13 C 483 PRO ASN LEU LEU ALA ASN GLY ALA SER GLY ILE ALA VAL SEQRES 14 C 483 GLY MET ALA THR ASN ILE PRO PRO HIS ASN LEU THR GLU SEQRES 15 C 483 LEU ILE ASN GLY VAL LEU SER LEU SER LYS ASN PRO ASP SEQRES 16 C 483 ILE SER ILE ALA GLU LEU MET GLU ASP ILE GLU GLY PRO SEQRES 17 C 483 ASP PHE PRO THR ALA GLY LEU ILE LEU GLY LYS SER GLY SEQRES 18 C 483 ILE ARG ARG ALA TYR GLU THR GLY ARG GLY SER ILE GLN SEQRES 19 C 483 MET ARG SER ARG ALA VAL ILE GLU GLU ARG GLY GLY GLY SEQRES 20 C 483 ARG GLN ARG ILE VAL VAL THR GLU ILE PRO PHE GLN VAL SEQRES 21 C 483 ASN LYS ALA ARG MET ILE GLU LYS ILE ALA GLU LEU VAL SEQRES 22 C 483 ARG ASP LYS LYS ILE ASP GLY ILE THR ASP LEU ARG ASP SEQRES 23 C 483 GLU THR SER LEU ARG THR GLY VAL ARG VAL VAL ILE ASP SEQRES 24 C 483 VAL ARG LYS ASP ALA ASN ALA SER VAL ILE LEU ASN ASN SEQRES 25 C 483 LEU TYR LYS GLN THR PRO LEU GLN THR SER PHE GLY VAL SEQRES 26 C 483 ASN MET ILE ALA LEU VAL ASN GLY ARG PRO LYS LEU ILE SEQRES 27 C 483 ASN LEU LYS GLU ALA LEU VAL HIS TYR LEU GLU HIS GLN SEQRES 28 C 483 LYS THR VAL VAL ARG ARG ARG THR GLN TYR ASN LEU ARG SEQRES 29 C 483 LYS ALA LYS ASP ARG ALA HIS ILE LEU GLU GLY LEU ARG SEQRES 30 C 483 ILE ALA LEU ASP HIS ILE ASP GLU ILE ILE SER THR ILE SEQRES 31 C 483 ARG GLU SER ASP THR ASP LYS VAL ALA MET GLU SER LEU SEQRES 32 C 483 GLN GLN ARG PHE LYS LEU SER GLU LYS GLN ALA GLN ALA SEQRES 33 C 483 ILE LEU ASP MET ARG LEU ARG ARG LEU THR GLY LEU GLU SEQRES 34 C 483 ARG ASP LYS ILE GLU ALA GLU TYR ASN GLU LEU LEU ASN SEQRES 35 C 483 TYR ILE SER GLU LEU GLU THR ILE LEU ALA ASP GLU GLU SEQRES 36 C 483 VAL LEU LEU GLN LEU VAL ARG ASP GLU LEU THR GLU ILE SEQRES 37 C 483 ARG ASP ARG PHE GLY ASP ASP ARG ARG THR GLU ILE GLN SEQRES 38 C 483 LEU GLY SEQRES 1 D 190 LYS LEU ALA ASP CYS SER SER LYS SER PRO GLU GLU CYS SEQRES 2 D 190 GLU ILE PHE LEU VAL GLU GLY ASP SER ALA GLY GLY SER SEQRES 3 D 190 THR LYS SER GLY ARG ASP SER ARG THR GLN ALA ILE LEU SEQRES 4 D 190 PRO LEU ARG GLY LYS ILE LEU ASN VAL GLU LYS ALA ARG SEQRES 5 D 190 LEU ASP ARG ILE LEU ASN ASN ASN GLU ILE ARG GLN MET SEQRES 6 D 190 ILE THR ALA PHE GLY THR GLY ILE GLY GLY ASP PHE ASP SEQRES 7 D 190 LEU ALA LYS ALA ARG TYR HIS LYS ILE VAL ILE MET THR SEQRES 8 D 190 ASP ALA ASP VAL ASP GLY ALA HIS ILE ARG THR LEU LEU SEQRES 9 D 190 LEU THR PHE PHE TYR ARG PHE MET ARG PRO LEU ILE GLU SEQRES 10 D 190 ALA GLY TYR VAL TYR ILE ALA GLN PRO PRO THR GLY TYR SEQRES 11 D 190 LYS GLY LEU GLY GLU MET ASN ALA ASP GLN LEU TRP GLU SEQRES 12 D 190 THR THR MET ASN PRO GLU HIS ARG ALA LEU LEU GLN VAL SEQRES 13 D 190 LYS LEU GLU ASP ALA ILE GLU ALA ASP GLN THR PHE GLU SEQRES 14 D 190 MET LEU MET GLY ASP VAL VAL GLU ASN ARG ARG GLN PHE SEQRES 15 D 190 ILE GLU ASP ASN ALA VAL TYR ALA SEQRES 1 E 8 DA DG DC DC DG DT DA DG SEQRES 1 G 13 DG DG DT DA DC DC DT DA DC DG DG DC DT SEQRES 1 F 20 DA DG DC DC DG DT DA DG DG DT DA DC DC SEQRES 2 F 20 DT DA DC DG DG DC DT HET MN A 501 1 HET GOL A 502 6 HET GOL A 503 6 HET MN B 701 1 HET GOL C 501 6 HET GOL C 502 6 HET MN D1001 1 HET GOL E 101 6 HET GOL G2101 6 HETNAM MN MANGANESE (II) ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 8 MN 3(MN 2+) FORMUL 9 GOL 6(C3 H8 O3) FORMUL 17 HOH *644(H2 O) HELIX 1 AA1 ILE A 14 ARG A 33 1 20 HELIX 2 AA2 LYS A 43 GLN A 56 1 14 HELIX 3 AA3 SER A 67 TYR A 78 1 12 HELIX 4 AA4 GLY A 82 MET A 93 1 12 HELIX 5 AA5 ILE A 131 ARG A 137 1 7 HELIX 6 AA6 PRO A 165 GLY A 171 1 7 HELIX 7 AA7 ASN A 187 ASN A 201 1 15 HELIX 8 AA8 SER A 205 MET A 210 1 6 HELIX 9 AA9 LYS A 227 GLY A 237 1 11 HELIX 10 AB1 ASN A 269 ASP A 283 1 15 HELIX 11 AB2 ASN A 313 THR A 325 1 13 HELIX 12 AB3 ASN A 347 HIS A 390 1 44 HELIX 13 AB4 HIS A 390 GLU A 400 1 11 HELIX 14 AB5 THR A 403 PHE A 415 1 13 HELIX 15 AB6 SER A 418 MET A 428 1 11 HELIX 16 AB7 ARG A 429 THR A 434 5 6 HELIX 17 AB8 LEU A 436 ASP A 461 1 26 HELIX 18 AB9 ASP A 461 GLY A 481 1 21 HELIX 19 AC1 GLY B 436 ARG B 447 1 12 HELIX 20 AC2 ARG B 468 ASN B 475 1 8 HELIX 21 AC3 ASN B 475 GLY B 486 1 12 HELIX 22 AC4 ILE B 489 PHE B 493 5 5 HELIX 23 AC5 ASP B 494 ALA B 498 5 5 HELIX 24 AC6 ASP B 510 MET B 528 1 19 HELIX 25 AC7 MET B 528 ALA B 534 1 7 HELIX 26 AC8 GLY B 582 MET B 586 5 5 HELIX 27 AC9 ASN B 587 MET B 596 1 10 HELIX 28 AD1 ASP B 610 GLY B 623 1 14 HELIX 29 AD2 VAL B 625 ALA B 637 1 13 HELIX 30 AD3 ILE C 14 ARG C 33 1 20 HELIX 31 AD4 LYS C 43 GLN C 56 1 14 HELIX 32 AD5 SER C 67 TYR C 78 1 12 HELIX 33 AD6 GLY C 82 MET C 93 1 12 HELIX 34 AD7 ILE C 131 ARG C 137 1 7 HELIX 35 AD8 PRO C 165 GLY C 171 1 7 HELIX 36 AD9 ASN C 187 ASN C 201 1 15 HELIX 37 AE1 SER C 205 MET C 210 1 6 HELIX 38 AE2 LYS C 227 GLY C 237 1 11 HELIX 39 AE3 ASN C 269 ASP C 283 1 15 HELIX 40 AE4 ASN C 313 THR C 325 1 13 HELIX 41 AE5 ASN C 347 HIS C 390 1 44 HELIX 42 AE6 HIS C 390 GLU C 400 1 11 HELIX 43 AE7 THR C 403 PHE C 415 1 13 HELIX 44 AE8 SER C 418 MET C 428 1 11 HELIX 45 AE9 ARG C 429 LEU C 433 5 5 HELIX 46 AF1 THR C 434 ASP C 461 1 28 HELIX 47 AF2 ASP C 461 GLY C 481 1 21 HELIX 48 AF3 GLY D 436 ARG D 447 1 12 HELIX 49 AF4 ARG D 468 ASN D 475 1 8 HELIX 50 AF5 ASN D 475 GLY D 486 1 12 HELIX 51 AF6 ILE D 489 PHE D 493 5 5 HELIX 52 AF7 ASP D 494 ALA D 498 5 5 HELIX 53 AF8 ASP D 510 MET D 528 1 19 HELIX 54 AF9 MET D 528 ALA D 534 1 7 HELIX 55 AG1 GLY D 582 MET D 586 5 5 HELIX 56 AG2 ASN D 587 MET D 596 1 10 HELIX 57 AG3 ASP D 610 GLY D 623 1 14 HELIX 58 AG4 VAL D 625 ALA D 637 1 13 SHEET 1 AA1 6 GLU A 11 ASN A 13 0 SHEET 2 AA1 6 LEU B 604 LYS B 607 1 O LYS B 607 N ARG A 12 SHEET 3 AA1 6 VAL B 537 ILE B 539 -1 N ILE B 539 O LEU B 604 SHEET 4 AA1 6 LYS B 502 MET B 506 1 N ILE B 503 O TYR B 538 SHEET 5 AA1 6 GLU B 430 GLU B 435 1 N ILE B 431 O VAL B 504 SHEET 6 AA1 6 GLN B 452 LEU B 457 1 O ALA B 453 N GLU B 430 SHEET 1 AA2 3 LYS A 65 LYS A 66 0 SHEET 2 AA2 3 GLU A 125 MET A 128 -1 O ALA A 126 N LYS A 65 SHEET 3 AA2 3 VAL A 104 GLN A 107 -1 N ASP A 105 O ARG A 127 SHEET 1 AA3 2 PHE A 146 ASP A 148 0 SHEET 2 AA3 2 ARG A 155 PRO A 157 -1 O GLU A 156 N ILE A 147 SHEET 1 AA4 2 ALA A 172 ILE A 175 0 SHEET 2 AA4 2 ALA A 180 ILE A 183 -1 O ILE A 183 N ALA A 172 SHEET 1 AA5 4 GLN A 328 ASN A 334 0 SHEET 2 AA5 4 ARG A 238 ARG A 244 -1 N GLY A 239 O VAL A 333 SHEET 3 AA5 4 LEU A 223 LEU A 225 -1 N LEU A 223 O ARG A 244 SHEET 4 AA5 4 GLU A 487 GLN A 489 1 O GLN A 489 N ILE A 224 SHEET 1 AA6 4 ARG A 246 GLY A 253 0 SHEET 2 AA6 4 ARG A 256 GLU A 263 -1 O VAL A 260 N VAL A 248 SHEET 3 AA6 4 VAL A 304 VAL A 308 -1 O VAL A 304 N VAL A 261 SHEET 4 AA6 4 ILE A 289 ASP A 294 -1 N ARG A 293 O VAL A 305 SHEET 1 AA7 2 ILE A 336 VAL A 339 0 SHEET 2 AA7 2 ARG A 342 LEU A 345 -1 O ARG A 342 N VAL A 339 SHEET 1 AA8 6 GLU C 11 ASN C 13 0 SHEET 2 AA8 6 LEU D 604 LYS D 607 1 O LYS D 607 N ARG C 12 SHEET 3 AA8 6 VAL D 537 ILE D 539 -1 N ILE D 539 O LEU D 604 SHEET 4 AA8 6 LYS D 502 MET D 506 1 N ILE D 503 O TYR D 538 SHEET 5 AA8 6 GLU D 430 GLU D 435 1 N ILE D 431 O VAL D 504 SHEET 6 AA8 6 GLN D 452 LEU D 457 1 O ALA D 453 N GLU D 430 SHEET 1 AA9 3 LYS C 65 LYS C 66 0 SHEET 2 AA9 3 GLU C 125 MET C 128 -1 O ALA C 126 N LYS C 65 SHEET 3 AA9 3 VAL C 104 GLN C 107 -1 N ASP C 105 O ARG C 127 SHEET 1 AB1 2 PHE C 146 ASP C 148 0 SHEET 2 AB1 2 ARG C 155 PRO C 157 -1 O GLU C 156 N ILE C 147 SHEET 1 AB2 2 ALA C 172 ILE C 175 0 SHEET 2 AB2 2 ALA C 180 ILE C 183 -1 O ILE C 183 N ALA C 172 SHEET 1 AB3 4 GLN C 328 ASN C 334 0 SHEET 2 AB3 4 ARG C 238 ARG C 244 -1 N GLY C 239 O VAL C 333 SHEET 3 AB3 4 LEU C 223 LEU C 225 -1 N LEU C 223 O ARG C 244 SHEET 4 AB3 4 GLU C 487 GLN C 489 1 O GLN C 489 N ILE C 224 SHEET 1 AB4 4 ARG C 246 GLY C 253 0 SHEET 2 AB4 4 ARG C 256 GLU C 263 -1 O VAL C 260 N VAL C 248 SHEET 3 AB4 4 VAL C 304 VAL C 308 -1 O VAL C 304 N VAL C 261 SHEET 4 AB4 4 ILE C 289 ASP C 294 -1 N ARG C 293 O VAL C 305 SHEET 1 AB5 2 ILE C 336 VAL C 339 0 SHEET 2 AB5 2 ARG C 342 LEU C 345 -1 O ARG C 342 N VAL C 339 LINK O TYR A 322 MN MN A 501 1555 1555 2.52 LINK O THR A 325 MN MN A 501 1555 1555 2.40 LINK O GLN A 328 MN MN A 501 1555 1555 2.35 LINK MN MN A 501 O HOH A 705 1555 1555 2.12 LINK MN MN A 501 O HOH A 809 1555 1555 2.59 LINK OD2 ASP B 508 MN MN B 701 1555 1555 2.41 LINK OD2 ASP B 510 MN MN B 701 1555 1555 2.20 LINK MN MN B 701 O HOH B 818 1555 1555 2.13 LINK MN MN B 701 O HOH B 842 1555 1555 2.17 LINK MN MN B 701 O HOH B 848 1555 1555 2.57 LINK MN MN B 701 O HOH E 211 1555 1555 2.42 LINK OD2 ASP D 508 MN MN D1001 1555 1555 2.31 LINK OD2 ASP D 510 MN MN D1001 1555 1555 2.27 LINK MN MN D1001 O HOH D1108 1555 1555 2.02 LINK MN MN D1001 O HOH D1110 1555 1555 2.35 LINK MN MN D1001 O HOH D1116 1555 1555 2.27 LINK MN MN D1001 O HOH D1130 1555 1555 2.47 CISPEP 1 LEU A 490 GLY A 491 0 1.47 SITE 1 AC1 5 TYR A 322 THR A 325 GLN A 328 HOH A 705 SITE 2 AC1 5 HOH A 809 SITE 1 AC2 2 ASP A 61 ARG A 127 SITE 1 AC3 4 ASP A 96 MET A 113 PRO A 219 THR A 220 SITE 1 AC4 6 ASP B 508 ASP B 510 HOH B 818 HOH B 842 SITE 2 AC4 6 HOH B 848 HOH E 211 SITE 1 AC5 6 ARG C 47 ARG C 48 GLU C 156 PRO C 157 SITE 2 AC5 6 HOH C 612 HOH C 677 SITE 1 AC6 7 ARG A 244 ASN A 319 GLU C 251 GLY C 255 SITE 2 AC6 7 ARG C 256 HOH C 686 HOH C 709 SITE 1 AC7 6 ASP D 508 ASP D 510 HOH D1108 HOH D1110 SITE 2 AC7 6 HOH D1116 HOH D1130 SITE 1 AC8 7 PHE A 97 SER A 112 MET A 113 GLN A 267 SITE 2 AC8 7 VAL A 268 HOH A 681 DC E 4 SITE 1 AC9 6 SER A 84 DG E 8 DC F2013 DG G2009 SITE 2 AC9 6 DT G2010 HOH G2213 CRYST1 93.395 93.395 410.583 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010707 0.006182 0.000000 0.00000 SCALE2 0.000000 0.012364 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002436 0.00000