HEADER IMMUNE SYSTEM 08-JUL-15 5CFL TITLE CRYSTAL STRUCTURE OF ANEMONE STING (NEMATOSTELLA VECTENSIS) IN COMPLEX TITLE 2 WITH 3', 3' C-DI-GMP, C[G(3', 5')PG(3', 5')P] COMPND MOL_ID: 1; COMPND 2 MOLECULE: STIMULATOR OF INTERFERON GENES; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 193-377; COMPND 5 SYNONYM: PREDICTED PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEMATOSTELLA VECTENSIS; SOURCE 3 ORGANISM_COMMON: STARLET SEA ANEMONE; SOURCE 4 ORGANISM_TAXID: 45351; SOURCE 5 GENE: V1G246111; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STING, CYCLIC-DINUCLEOTIDE BINDING DOMAIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.J.KRANZUSCH,S.C.WILSON,A.S.Y.LEE,J.M.BERGER,J.A.DOUDNA,R.E.VANCE REVDAT 6 06-MAR-24 5CFL 1 HETSYN REVDAT 5 20-NOV-19 5CFL 1 REMARK REVDAT 4 27-SEP-17 5CFL 1 JRNL REMARK REVDAT 3 30-SEP-15 5CFL 1 JRNL REVDAT 2 09-SEP-15 5CFL 1 JRNL REVDAT 1 26-AUG-15 5CFL 0 JRNL AUTH P.J.KRANZUSCH,S.C.WILSON,A.S.LEE,J.M.BERGER,J.A.DOUDNA, JRNL AUTH 2 R.E.VANCE JRNL TITL ANCIENT ORIGIN OF CGAS-STING REVEALS MECHANISM OF UNIVERSAL JRNL TITL 2 2',3' CGAMP SIGNALING. JRNL REF MOL.CELL V. 59 891 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 26300263 JRNL DOI 10.1016/J.MOLCEL.2015.07.022 REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 61202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.620 REMARK 3 FREE R VALUE TEST SET COUNT : 1606 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.5644 - 4.0826 1.00 5498 145 0.1371 0.1804 REMARK 3 2 4.0826 - 3.2409 1.00 5529 138 0.1450 0.1817 REMARK 3 3 3.2409 - 2.8314 1.00 5551 152 0.1811 0.2067 REMARK 3 4 2.8314 - 2.5725 1.00 5509 150 0.2016 0.2593 REMARK 3 5 2.5725 - 2.3882 1.00 5472 150 0.1949 0.1944 REMARK 3 6 2.3882 - 2.2474 1.00 5515 144 0.1934 0.2385 REMARK 3 7 2.2474 - 2.1348 1.00 5551 153 0.1898 0.2338 REMARK 3 8 2.1348 - 2.0419 1.00 5490 144 0.1953 0.2128 REMARK 3 9 2.0419 - 1.9633 1.00 5532 152 0.2115 0.2398 REMARK 3 10 1.9633 - 1.8956 1.00 5483 148 0.2518 0.2698 REMARK 3 11 1.8956 - 1.8363 0.81 4466 130 0.3049 0.3292 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3232 REMARK 3 ANGLE : 0.736 4372 REMARK 3 CHIRALITY : 0.029 448 REMARK 3 PLANARITY : 0.004 562 REMARK 3 DIHEDRAL : 15.458 1218 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8059 21.1836 -11.1701 REMARK 3 T TENSOR REMARK 3 T11: 0.2534 T22: 0.3198 REMARK 3 T33: 0.3041 T12: -0.0226 REMARK 3 T13: -0.0287 T23: 0.0368 REMARK 3 L TENSOR REMARK 3 L11: 0.6853 L22: 0.4280 REMARK 3 L33: 0.3732 L12: -0.4635 REMARK 3 L13: -0.1028 L23: 0.3964 REMARK 3 S TENSOR REMARK 3 S11: 0.1086 S12: -0.0419 S13: -0.3414 REMARK 3 S21: -0.0760 S22: -0.0391 S23: 0.2302 REMARK 3 S31: 0.2770 S32: -0.4305 S33: 0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9059 35.2834 -22.7787 REMARK 3 T TENSOR REMARK 3 T11: 0.2305 T22: 0.3330 REMARK 3 T33: 0.3067 T12: 0.0438 REMARK 3 T13: 0.0319 T23: 0.0811 REMARK 3 L TENSOR REMARK 3 L11: 0.6863 L22: 0.2572 REMARK 3 L33: 0.0206 L12: 0.2026 REMARK 3 L13: 0.0048 L23: -0.0827 REMARK 3 S TENSOR REMARK 3 S11: 0.1568 S12: 0.4922 S13: 0.5181 REMARK 3 S21: -0.1367 S22: 0.2634 S23: 0.2146 REMARK 3 S31: -0.1464 S32: -0.4870 S33: -0.0004 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.1267 27.9107 -20.1107 REMARK 3 T TENSOR REMARK 3 T11: 0.2504 T22: 0.3159 REMARK 3 T33: 0.2725 T12: 0.0463 REMARK 3 T13: 0.0133 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.9135 L22: 1.2704 REMARK 3 L33: 0.2929 L12: 0.5970 REMARK 3 L13: -0.5479 L23: -0.6325 REMARK 3 S TENSOR REMARK 3 S11: -0.0099 S12: 0.0269 S13: 0.0200 REMARK 3 S21: -0.0259 S22: -0.1003 S23: -0.3121 REMARK 3 S31: 0.0993 S32: 0.1778 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2730 30.7396 -16.0049 REMARK 3 T TENSOR REMARK 3 T11: 0.2298 T22: 0.3577 REMARK 3 T33: 0.3853 T12: 0.0236 REMARK 3 T13: 0.0182 T23: 0.0262 REMARK 3 L TENSOR REMARK 3 L11: 0.4733 L22: 1.0129 REMARK 3 L33: 1.8622 L12: 0.8241 REMARK 3 L13: -0.7726 L23: -0.9413 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: -0.1014 S13: 0.2103 REMARK 3 S21: 0.1209 S22: -0.0448 S23: -0.2544 REMARK 3 S31: -0.0748 S32: 0.3307 S33: -0.0016 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4755 31.1758 -19.4163 REMARK 3 T TENSOR REMARK 3 T11: 0.2168 T22: 0.3477 REMARK 3 T33: 0.3441 T12: 0.0441 REMARK 3 T13: 0.0599 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.4147 L22: 0.8499 REMARK 3 L33: 0.8896 L12: 0.2366 REMARK 3 L13: -0.0633 L23: -1.0684 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: 0.0520 S13: 0.2227 REMARK 3 S21: -0.0375 S22: -0.0889 S23: -0.2902 REMARK 3 S31: 0.1575 S32: 0.2969 S33: -0.0474 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8795 15.3128 -8.0792 REMARK 3 T TENSOR REMARK 3 T11: 0.3151 T22: 0.2380 REMARK 3 T33: 0.3195 T12: 0.0132 REMARK 3 T13: -0.0230 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.9649 L22: 1.0507 REMARK 3 L33: 0.4005 L12: -0.0417 REMARK 3 L13: -0.0521 L23: -0.3382 REMARK 3 S TENSOR REMARK 3 S11: -0.0009 S12: 0.0385 S13: -0.4286 REMARK 3 S21: -0.0001 S22: 0.0481 S23: 0.0732 REMARK 3 S31: 0.3258 S32: -0.0483 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 342 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0174 20.1043 -22.4176 REMARK 3 T TENSOR REMARK 3 T11: 0.3728 T22: 0.3901 REMARK 3 T33: 0.2590 T12: 0.0523 REMARK 3 T13: -0.0025 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 1.0413 L22: 0.6610 REMARK 3 L33: 1.2514 L12: 0.7563 REMARK 3 L13: -0.7983 L23: -0.0490 REMARK 3 S TENSOR REMARK 3 S11: 0.0413 S12: 0.2702 S13: -0.1773 REMARK 3 S21: -0.4130 S22: -0.0806 S23: -0.1029 REMARK 3 S31: 0.5232 S32: 0.0171 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 360 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5115 21.9042 -30.1970 REMARK 3 T TENSOR REMARK 3 T11: 0.4985 T22: 0.5045 REMARK 3 T33: 0.3661 T12: 0.0650 REMARK 3 T13: 0.1145 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.4706 L22: 1.3889 REMARK 3 L33: 0.7104 L12: 0.5951 REMARK 3 L13: -0.5751 L23: -0.8402 REMARK 3 S TENSOR REMARK 3 S11: -0.3045 S12: 0.5235 S13: -0.2854 REMARK 3 S21: -0.9065 S22: 0.2178 S23: -0.2262 REMARK 3 S31: 1.0203 S32: 0.0171 S33: -0.0221 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 191 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6812 22.8964 -2.0071 REMARK 3 T TENSOR REMARK 3 T11: 0.2787 T22: 0.2393 REMARK 3 T33: 0.2843 T12: 0.0222 REMARK 3 T13: -0.0469 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.9630 L22: 0.3426 REMARK 3 L33: 0.6279 L12: -0.6573 REMARK 3 L13: -0.5140 L23: 0.0973 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: -0.0073 S13: -0.2697 REMARK 3 S21: 0.0642 S22: 0.0621 S23: 0.1214 REMARK 3 S31: 0.3018 S32: 0.0329 S33: 0.0002 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 207 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4077 36.3330 10.2830 REMARK 3 T TENSOR REMARK 3 T11: 0.2888 T22: 0.3198 REMARK 3 T33: 0.3493 T12: 0.0811 REMARK 3 T13: -0.0440 T23: -0.0880 REMARK 3 L TENSOR REMARK 3 L11: 0.0841 L22: 0.6160 REMARK 3 L33: 0.2577 L12: 0.0840 REMARK 3 L13: 0.0912 L23: -0.0492 REMARK 3 S TENSOR REMARK 3 S11: 0.1528 S12: -0.3807 S13: 0.0189 REMARK 3 S21: 0.8028 S22: 0.3242 S23: -0.9602 REMARK 3 S31: 0.4867 S32: 0.3633 S33: 0.0099 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 221 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1120 41.7731 6.5259 REMARK 3 T TENSOR REMARK 3 T11: 0.2627 T22: 0.3146 REMARK 3 T33: 0.2761 T12: 0.0509 REMARK 3 T13: -0.0003 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.8900 L22: 2.1974 REMARK 3 L33: 0.0926 L12: -0.0504 REMARK 3 L13: 0.2533 L23: 0.6159 REMARK 3 S TENSOR REMARK 3 S11: -0.0527 S12: -0.0459 S13: 0.2916 REMARK 3 S21: 0.0299 S22: -0.0289 S23: 0.1545 REMARK 3 S31: -0.0842 S32: -0.1350 S33: 0.0009 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 250 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9835 44.1729 2.4215 REMARK 3 T TENSOR REMARK 3 T11: 0.3044 T22: 0.2848 REMARK 3 T33: 0.3895 T12: 0.0857 REMARK 3 T13: -0.0250 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 0.3718 L22: 1.1016 REMARK 3 L33: 1.7956 L12: 0.6693 REMARK 3 L13: 0.3404 L23: 0.9184 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: 0.1426 S13: 0.4125 REMARK 3 S21: -0.1567 S22: 0.0196 S23: -0.0928 REMARK 3 S31: -0.3214 S32: -0.1623 S33: -0.0091 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 273 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2575 42.8364 5.8382 REMARK 3 T TENSOR REMARK 3 T11: 0.2794 T22: 0.2805 REMARK 3 T33: 0.3291 T12: 0.0785 REMARK 3 T13: 0.0116 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 0.6564 L22: 0.6000 REMARK 3 L33: 1.0282 L12: 0.4065 REMARK 3 L13: 1.0268 L23: 0.6577 REMARK 3 S TENSOR REMARK 3 S11: -0.0890 S12: -0.1076 S13: 0.3636 REMARK 3 S21: 0.0096 S22: 0.0026 S23: -0.0645 REMARK 3 S31: -0.1878 S32: -0.2675 S33: -0.0765 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 303 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3033 24.8337 -5.5296 REMARK 3 T TENSOR REMARK 3 T11: 0.2395 T22: 0.2904 REMARK 3 T33: 0.3067 T12: -0.0288 REMARK 3 T13: -0.0052 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 1.6669 L22: 1.7191 REMARK 3 L33: 0.6027 L12: -0.1576 REMARK 3 L13: 0.3595 L23: 0.4352 REMARK 3 S TENSOR REMARK 3 S11: 0.0532 S12: 0.0139 S13: -0.3092 REMARK 3 S21: 0.0540 S22: 0.0336 S23: 0.3224 REMARK 3 S31: 0.2152 S32: -0.2581 S33: 0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 342 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9047 31.7130 8.8169 REMARK 3 T TENSOR REMARK 3 T11: 0.3261 T22: 0.4134 REMARK 3 T33: 0.2599 T12: 0.0333 REMARK 3 T13: 0.0237 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.2514 L22: 1.2441 REMARK 3 L33: 1.2679 L12: 0.0940 REMARK 3 L13: -0.3170 L23: 0.8908 REMARK 3 S TENSOR REMARK 3 S11: 0.0433 S12: -0.4061 S13: -0.0863 REMARK 3 S21: 0.1818 S22: -0.0309 S23: 0.2490 REMARK 3 S31: 0.3268 S32: -0.4056 S33: -0.0002 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 360 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2059 39.9450 16.5789 REMARK 3 T TENSOR REMARK 3 T11: 0.4294 T22: 0.5523 REMARK 3 T33: 0.3604 T12: 0.0216 REMARK 3 T13: 0.0676 T23: -0.0854 REMARK 3 L TENSOR REMARK 3 L11: 0.6073 L22: 1.0718 REMARK 3 L33: 1.2450 L12: 0.3212 REMARK 3 L13: 0.4356 L23: 0.7051 REMARK 3 S TENSOR REMARK 3 S11: 0.2551 S12: -0.6832 S13: 0.0080 REMARK 3 S21: 0.7079 S22: -0.3313 S23: 0.3684 REMARK 3 S31: 0.5813 S32: -0.9113 S33: -0.0201 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CFL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61587 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.836 REMARK 200 RESOLUTION RANGE LOW (A) : 48.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.03600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.30 REMARK 200 R MERGE FOR SHELL (I) : 0.69900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M AMMONIUM CITRATE PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.35567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.71133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 651 O HOH A 695 1.92 REMARK 500 O HOH A 691 O HOH B 686 2.02 REMARK 500 O HOH A 513 O HOH A 673 2.03 REMARK 500 O HOH A 568 O HOH B 635 2.03 REMARK 500 O HOH A 586 O HOH A 694 2.06 REMARK 500 O HOH B 667 O HOH B 672 2.07 REMARK 500 O HOH A 649 O HOH A 682 2.14 REMARK 500 OE2 GLU B 266 O HOH B 501 2.14 REMARK 500 O HOH A 622 O HOH B 516 2.18 REMARK 500 O HOH B 506 O HOH B 660 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 206 -75.07 -157.67 REMARK 500 TYR B 206 -74.46 -157.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2E A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CFM RELATED DB: PDB REMARK 900 RELATED ID: 5CFN RELATED DB: PDB REMARK 900 RELATED ID: 5CFO RELATED DB: PDB REMARK 900 RELATED ID: 5CFP RELATED DB: PDB REMARK 900 RELATED ID: 5CFQ RELATED DB: PDB REMARK 900 RELATED ID: 5CFR RELATED DB: PDB DBREF 5CFL A 193 377 UNP A7SLZ2 A7SLZ2_NEMVE 193 377 DBREF 5CFL B 193 377 UNP A7SLZ2 A7SLZ2_NEMVE 193 377 SEQADV 5CFL GLY A 191 UNP A7SLZ2 EXPRESSION TAG SEQADV 5CFL SER A 192 UNP A7SLZ2 EXPRESSION TAG SEQADV 5CFL GLY B 191 UNP A7SLZ2 EXPRESSION TAG SEQADV 5CFL SER B 192 UNP A7SLZ2 EXPRESSION TAG SEQRES 1 A 187 GLY SER ASN VAL ALA ASP GLY LEU ALA TRP SER TYR TYR SEQRES 2 A 187 PHE GLY TYR LEU LYS PHE VAL LEU PRO GLU LEU GLU LYS SEQRES 3 A 187 GLN ILE GLU LYS THR SER LYS PHE ARG SER LYS GLU LYS SEQRES 4 A 187 PHE VAL LYS LYS MET PHE ILE LEU ILE PRO SER ASN CYS SEQRES 5 A 187 PHE TRP ASP ASP LYS ILE PRO GLY SER ASP TYR ASP PRO SEQRES 6 A 187 GLN ASN ARG ILE THR PHE GLU GLY ASN THR GLU PRO LEU SEQRES 7 A 187 GLU LYS THR ARG GLY GLY VAL PHE LEU ARG HIS TYR LYS SEQRES 8 A 187 HIS SER VAL TYR GLU ILE LYS ASP GLY GLU ASN GLU PRO SEQRES 9 A 187 TRP PHE CYS ILE MET GLU TYR ALA THR PRO LEU LEU THR SEQRES 10 A 187 LEU TYR ASP MET SER VAL ALA GLN PRO GLY GLU LEU SER SEQRES 11 A 187 ARG GLU GLU ARG ASP ALA GLN VAL VAL VAL PHE LEU ARG SEQRES 12 A 187 LYS LEU GLN ASP ILE LEU GLU GLY ASP ARG ALA CYS GLN SEQRES 13 A 187 GLY LYS TYR GLU LEU VAL THR PHE SER PRO ASP ARG ASP SEQRES 14 A 187 LEU ALA ASP VAL MET LEU ARG LYS LEU LYS ASP SER GLU SEQRES 15 A 187 LEU GLU ILE GLY GLY SEQRES 1 B 187 GLY SER ASN VAL ALA ASP GLY LEU ALA TRP SER TYR TYR SEQRES 2 B 187 PHE GLY TYR LEU LYS PHE VAL LEU PRO GLU LEU GLU LYS SEQRES 3 B 187 GLN ILE GLU LYS THR SER LYS PHE ARG SER LYS GLU LYS SEQRES 4 B 187 PHE VAL LYS LYS MET PHE ILE LEU ILE PRO SER ASN CYS SEQRES 5 B 187 PHE TRP ASP ASP LYS ILE PRO GLY SER ASP TYR ASP PRO SEQRES 6 B 187 GLN ASN ARG ILE THR PHE GLU GLY ASN THR GLU PRO LEU SEQRES 7 B 187 GLU LYS THR ARG GLY GLY VAL PHE LEU ARG HIS TYR LYS SEQRES 8 B 187 HIS SER VAL TYR GLU ILE LYS ASP GLY GLU ASN GLU PRO SEQRES 9 B 187 TRP PHE CYS ILE MET GLU TYR ALA THR PRO LEU LEU THR SEQRES 10 B 187 LEU TYR ASP MET SER VAL ALA GLN PRO GLY GLU LEU SER SEQRES 11 B 187 ARG GLU GLU ARG ASP ALA GLN VAL VAL VAL PHE LEU ARG SEQRES 12 B 187 LYS LEU GLN ASP ILE LEU GLU GLY ASP ARG ALA CYS GLN SEQRES 13 B 187 GLY LYS TYR GLU LEU VAL THR PHE SER PRO ASP ARG ASP SEQRES 14 B 187 LEU ALA ASP VAL MET LEU ARG LYS LEU LYS ASP SER GLU SEQRES 15 B 187 LEU GLU ILE GLY GLY HET C2E A 401 46 HET FLC A 402 13 HET FLC A 403 13 HET FLC B 401 13 HET FLC B 402 13 HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETNAM FLC CITRATE ANION HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 C2E C20 H24 N10 O14 P2 FORMUL 4 FLC 4(C6 H5 O7 3-) FORMUL 8 HOH *392(H2 O) HELIX 1 AA1 VAL A 194 GLY A 205 1 12 HELIX 2 AA2 TYR A 206 LEU A 211 1 6 HELIX 3 AA3 GLU A 213 GLU A 219 1 7 HELIX 4 AA4 THR A 221 LYS A 227 1 7 HELIX 5 AA5 PRO A 304 GLN A 315 1 12 HELIX 6 AA6 SER A 320 GLY A 341 1 22 HELIX 7 AA7 ASP A 342 GLN A 346 5 5 HELIX 8 AA8 ASP A 359 ASP A 370 1 12 HELIX 9 AA9 VAL B 194 GLY B 205 1 12 HELIX 10 AB1 TYR B 206 LEU B 211 1 6 HELIX 11 AB2 GLU B 213 GLU B 219 1 7 HELIX 12 AB3 THR B 221 LYS B 227 1 7 HELIX 13 AB4 PRO B 304 GLN B 315 1 12 HELIX 14 AB5 SER B 320 GLY B 341 1 22 HELIX 15 AB6 ASP B 342 GLN B 346 5 5 HELIX 16 AB7 ASP B 359 ASP B 370 1 12 SHEET 1 AA1 5 ILE A 259 ASN A 264 0 SHEET 2 AA1 5 SER A 283 ILE A 287 -1 O VAL A 284 N GLY A 263 SHEET 3 AA1 5 TRP A 295 TYR A 301 -1 O CYS A 297 N TYR A 285 SHEET 4 AA1 5 PHE A 230 PRO A 239 1 N LEU A 237 O GLU A 300 SHEET 5 AA1 5 TYR A 349 PHE A 354 1 O VAL A 352 N ILE A 238 SHEET 1 AA2 2 LEU A 268 ARG A 272 0 SHEET 2 AA2 2 PHE A 276 TYR A 280 -1 O TYR A 280 N LEU A 268 SHEET 1 AA3 5 ILE B 259 ASN B 264 0 SHEET 2 AA3 5 SER B 283 ILE B 287 -1 O VAL B 284 N GLY B 263 SHEET 3 AA3 5 TRP B 295 TYR B 301 -1 O CYS B 297 N TYR B 285 SHEET 4 AA3 5 PHE B 230 PRO B 239 1 N PHE B 235 O ILE B 298 SHEET 5 AA3 5 TYR B 349 PHE B 354 1 O VAL B 352 N ILE B 238 SHEET 1 AA4 2 LEU B 268 ARG B 272 0 SHEET 2 AA4 2 PHE B 276 TYR B 280 -1 O TYR B 280 N LEU B 268 SITE 1 AC1 35 GLY A 205 TYR A 206 ARG A 272 VAL A 275 SITE 2 AC1 35 PHE A 276 ARG A 278 TYR A 280 GLU A 300 SITE 3 AC1 35 THR A 303 PRO A 304 HOH A 507 HOH A 508 SITE 4 AC1 35 HOH A 524 HOH A 526 HOH A 537 HOH A 558 SITE 5 AC1 35 HOH A 565 HOH A 598 HOH A 610 HOH A 615 SITE 6 AC1 35 HOH A 622 HOH A 637 GLY B 205 TYR B 206 SITE 7 AC1 35 ARG B 272 VAL B 275 PHE B 276 ARG B 278 SITE 8 AC1 35 TYR B 280 GLU B 300 THR B 303 PRO B 304 SITE 9 AC1 35 HOH B 516 HOH B 518 HOH B 549 SITE 1 AC2 11 ARG A 333 GLN A 336 LEU A 351 VAL A 352 SITE 2 AC2 11 THR A 353 LYS A 367 FLC A 403 HOH A 516 SITE 3 AC2 11 HOH A 560 HOH A 572 HOH A 611 SITE 1 AC3 11 GLU A 350 LEU A 351 FLC A 402 HOH A 512 SITE 2 AC3 11 HOH A 516 HOH A 522 HOH A 541 HOH A 561 SITE 3 AC3 11 HOH A 572 HOH A 611 HOH A 623 SITE 1 AC4 9 GLN B 336 LEU B 351 VAL B 352 THR B 353 SITE 2 AC4 9 LYS B 367 HOH B 512 HOH B 550 HOH B 594 SITE 3 AC4 9 HOH B 601 SITE 1 AC5 9 GLU B 350 LEU B 351 HOH B 512 HOH B 526 SITE 2 AC5 9 HOH B 552 HOH B 577 HOH B 588 HOH B 594 SITE 3 AC5 9 HOH B 601 CRYST1 81.109 81.109 97.067 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012329 0.007118 0.000000 0.00000 SCALE2 0.000000 0.014236 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010302 0.00000