HEADER IMMUNE SYSTEM 08-JUL-15 5CFQ TITLE CRYSTAL STRUCTURE OF ANEMONE STING (NEMATOSTELLA VECTENSIS) IN COMPLEX TITLE 2 WITH 2',3' CGAMP, C[G(2',5')PA(3',5')P] COMPND MOL_ID: 1; COMPND 2 MOLECULE: STIMULATOR OF INTERFERON GENES; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 193-377; COMPND 5 SYNONYM: PREDICTED PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEMATOSTELLA VECTENSIS; SOURCE 3 ORGANISM_COMMON: STARLET SEA ANEMONE; SOURCE 4 ORGANISM_TAXID: 45351; SOURCE 5 GENE: V1G246111; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STING, CYCLIC-DINUCLEOTIDE BINDING DOMAIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.J.KRANZUSCH,S.C.WILSON,A.S.Y.LEE,J.M.BERGER,J.A.DOUDNA,R.E.VANCE REVDAT 6 06-MAR-24 5CFQ 1 HETSYN REVDAT 5 20-NOV-19 5CFQ 1 REMARK REVDAT 4 27-SEP-17 5CFQ 1 JRNL REMARK REVDAT 3 30-SEP-15 5CFQ 1 JRNL REVDAT 2 09-SEP-15 5CFQ 1 JRNL REVDAT 1 26-AUG-15 5CFQ 0 JRNL AUTH P.J.KRANZUSCH,S.C.WILSON,A.S.LEE,J.M.BERGER,J.A.DOUDNA, JRNL AUTH 2 R.E.VANCE JRNL TITL ANCIENT ORIGIN OF CGAS-STING REVEALS MECHANISM OF UNIVERSAL JRNL TITL 2 2',3' CGAMP SIGNALING. JRNL REF MOL.CELL V. 59 891 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 26300263 JRNL DOI 10.1016/J.MOLCEL.2015.07.022 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 19337 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9921 - 4.0134 1.00 2792 148 0.1856 0.1845 REMARK 3 2 4.0134 - 3.1860 1.00 2675 141 0.2258 0.2594 REMARK 3 3 3.1860 - 2.7834 1.00 2621 137 0.2940 0.3230 REMARK 3 4 2.7834 - 2.5290 1.00 2604 138 0.3044 0.3704 REMARK 3 5 2.5290 - 2.3477 1.00 2611 137 0.3228 0.3599 REMARK 3 6 2.3477 - 2.2093 0.99 2567 135 0.3859 0.3857 REMARK 3 7 2.2093 - 2.0990 0.97 2499 132 0.3449 0.3491 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3145 REMARK 3 ANGLE : 0.733 4264 REMARK 3 CHIRALITY : 0.030 443 REMARK 3 PLANARITY : 0.004 532 REMARK 3 DIHEDRAL : 15.085 1166 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 193 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2915 89.1596 112.1950 REMARK 3 T TENSOR REMARK 3 T11: 0.5394 T22: 0.4032 REMARK 3 T33: 0.2870 T12: -0.1710 REMARK 3 T13: -0.0357 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.8985 L22: 1.9728 REMARK 3 L33: -0.1754 L12: -1.5666 REMARK 3 L13: 0.4392 L23: -0.6840 REMARK 3 S TENSOR REMARK 3 S11: -0.1612 S12: -0.0922 S13: 0.2114 REMARK 3 S21: -0.6255 S22: 0.2792 S23: 0.2542 REMARK 3 S31: -0.4870 S32: 0.1181 S33: -0.0575 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6966 87.3511 118.5342 REMARK 3 T TENSOR REMARK 3 T11: 0.9029 T22: 1.0288 REMARK 3 T33: 0.7748 T12: -0.4469 REMARK 3 T13: -0.0830 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 1.1292 L22: 4.1809 REMARK 3 L33: 4.2902 L12: -1.1288 REMARK 3 L13: -2.4664 L23: 3.3965 REMARK 3 S TENSOR REMARK 3 S11: 0.3781 S12: -0.7934 S13: -0.0566 REMARK 3 S21: 1.7329 S22: -0.8601 S23: 0.0230 REMARK 3 S31: 0.0974 S32: 1.7394 S33: -0.2971 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 262 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4942 93.8791 122.9559 REMARK 3 T TENSOR REMARK 3 T11: 1.4505 T22: 0.5790 REMARK 3 T33: 0.5714 T12: -0.0460 REMARK 3 T13: 0.1934 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 1.3138 L22: 5.3403 REMARK 3 L33: 2.6847 L12: 0.6450 REMARK 3 L13: 1.2439 L23: -2.9438 REMARK 3 S TENSOR REMARK 3 S11: -0.1628 S12: 0.6497 S13: 0.3732 REMARK 3 S21: 0.9341 S22: 0.7436 S23: 0.7743 REMARK 3 S31: -2.0141 S32: -0.2183 S33: 0.5211 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1501 94.1862 112.8312 REMARK 3 T TENSOR REMARK 3 T11: 0.8692 T22: 0.5310 REMARK 3 T33: 0.4571 T12: -0.3033 REMARK 3 T13: 0.0600 T23: 0.0386 REMARK 3 L TENSOR REMARK 3 L11: 0.7038 L22: -0.1848 REMARK 3 L33: 1.2792 L12: -0.3789 REMARK 3 L13: -0.1910 L23: 0.0385 REMARK 3 S TENSOR REMARK 3 S11: 0.6303 S12: -0.1161 S13: 0.2105 REMARK 3 S21: 0.1885 S22: -0.4884 S23: -0.1261 REMARK 3 S31: -0.2938 S32: 0.6305 S33: 0.1145 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6976 70.5068 118.8593 REMARK 3 T TENSOR REMARK 3 T11: 0.2968 T22: 0.6164 REMARK 3 T33: 0.5371 T12: -0.0047 REMARK 3 T13: 0.0359 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 0.7282 L22: 3.4085 REMARK 3 L33: 0.7518 L12: -0.9335 REMARK 3 L13: 0.2024 L23: -1.5341 REMARK 3 S TENSOR REMARK 3 S11: -0.0890 S12: 0.3546 S13: -0.2476 REMARK 3 S21: -0.2848 S22: -0.2923 S23: -0.2687 REMARK 3 S31: 0.3491 S32: 0.6429 S33: -0.0029 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9857 84.6661 105.8347 REMARK 3 T TENSOR REMARK 3 T11: 0.8935 T22: 0.6356 REMARK 3 T33: 0.5877 T12: -0.0716 REMARK 3 T13: -0.0241 T23: 0.0437 REMARK 3 L TENSOR REMARK 3 L11: 0.6718 L22: 2.5809 REMARK 3 L33: 1.4218 L12: 0.0549 REMARK 3 L13: -1.8328 L23: -0.1779 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: 0.6922 S13: -0.2212 REMARK 3 S21: -0.2595 S22: 0.0275 S23: -0.3614 REMARK 3 S31: 0.4020 S32: 0.1262 S33: -0.0005 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 193 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5931 79.9708 134.7459 REMARK 3 T TENSOR REMARK 3 T11: 0.3287 T22: 0.4221 REMARK 3 T33: 0.3965 T12: -0.0539 REMARK 3 T13: -0.0115 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 1.6615 L22: 0.8790 REMARK 3 L33: 4.3552 L12: 1.1289 REMARK 3 L13: -0.3798 L23: 0.7769 REMARK 3 S TENSOR REMARK 3 S11: 0.2684 S12: -0.1503 S13: -0.2921 REMARK 3 S21: 0.0480 S22: -0.1224 S23: -0.4607 REMARK 3 S31: -0.8979 S32: 0.4208 S33: 0.1568 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 220 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6515 93.6180 147.1588 REMARK 3 T TENSOR REMARK 3 T11: 1.1751 T22: 0.8778 REMARK 3 T33: 0.8310 T12: 0.0107 REMARK 3 T13: 0.0945 T23: -0.1140 REMARK 3 L TENSOR REMARK 3 L11: 0.6926 L22: 0.2574 REMARK 3 L33: 0.0896 L12: 0.0067 REMARK 3 L13: 0.2833 L23: 0.0074 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: -1.3703 S13: 0.7846 REMARK 3 S21: 0.1341 S22: 0.3607 S23: 0.4647 REMARK 3 S31: -0.5270 S32: 0.2157 S33: 0.0010 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 234 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0059 83.0514 133.4683 REMARK 3 T TENSOR REMARK 3 T11: 1.1671 T22: 0.5891 REMARK 3 T33: 0.6522 T12: 0.2505 REMARK 3 T13: -0.0624 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 2.5479 L22: 0.7959 REMARK 3 L33: 1.5722 L12: 1.0868 REMARK 3 L13: 0.4245 L23: 0.2015 REMARK 3 S TENSOR REMARK 3 S11: 0.9897 S12: -0.0715 S13: -0.2387 REMARK 3 S21: -1.6130 S22: -0.6310 S23: 0.1547 REMARK 3 S31: 0.3217 S32: -1.0209 S33: 0.2546 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 262 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6462 92.6515 130.5414 REMARK 3 T TENSOR REMARK 3 T11: 1.4659 T22: -0.0228 REMARK 3 T33: 0.7218 T12: -0.4063 REMARK 3 T13: 0.3837 T23: 0.0577 REMARK 3 L TENSOR REMARK 3 L11: 1.5189 L22: 1.7486 REMARK 3 L33: 9.0244 L12: -1.1241 REMARK 3 L13: -0.4003 L23: 2.4161 REMARK 3 S TENSOR REMARK 3 S11: -0.0675 S12: -0.2776 S13: -0.1556 REMARK 3 S21: 0.9199 S22: 0.1979 S23: 1.0459 REMARK 3 S31: -2.2430 S32: 3.6572 S33: -0.0816 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 278 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4918 88.6683 140.3253 REMARK 3 T TENSOR REMARK 3 T11: 0.9559 T22: 0.3698 REMARK 3 T33: 0.5902 T12: 0.1357 REMARK 3 T13: 0.2664 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 2.1250 L22: -0.6571 REMARK 3 L33: 0.8427 L12: -0.0488 REMARK 3 L13: 0.0536 L23: 0.3426 REMARK 3 S TENSOR REMARK 3 S11: 0.4022 S12: -0.1184 S13: 0.4488 REMARK 3 S21: 0.1504 S22: -0.0668 S23: 0.2627 REMARK 3 S31: -0.9828 S32: -0.4872 S33: 0.0094 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 303 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3156 69.3168 125.9169 REMARK 3 T TENSOR REMARK 3 T11: 0.2812 T22: 0.3265 REMARK 3 T33: 0.5802 T12: -0.0254 REMARK 3 T13: -0.0130 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 3.8374 L22: 2.9543 REMARK 3 L33: 1.6627 L12: 0.7726 REMARK 3 L13: -1.2056 L23: -0.7037 REMARK 3 S TENSOR REMARK 3 S11: -0.0825 S12: 0.0349 S13: -0.3688 REMARK 3 S21: -0.1137 S22: 0.0419 S23: 0.4945 REMARK 3 S31: 0.5571 S32: -0.3510 S33: -0.0015 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 342 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1906 77.3432 142.8446 REMARK 3 T TENSOR REMARK 3 T11: 0.6208 T22: 0.4800 REMARK 3 T33: 0.4842 T12: -0.0050 REMARK 3 T13: -0.0242 T23: 0.1051 REMARK 3 L TENSOR REMARK 3 L11: 0.5324 L22: 3.1829 REMARK 3 L33: 1.8138 L12: 0.2335 REMARK 3 L13: -1.1705 L23: 0.8264 REMARK 3 S TENSOR REMARK 3 S11: 0.1607 S12: -0.6483 S13: -0.4190 REMARK 3 S21: 0.0164 S22: -0.2115 S23: 0.3541 REMARK 3 S31: -0.0299 S32: 0.0558 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CFQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211544. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 4.0 - 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19434 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.099 REMARK 200 RESOLUTION RANGE LOW (A) : 42.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 14.60 REMARK 200 R MERGE (I) : 0.02400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.54100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 500 MM LISO4, 2% PEG-8000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.24850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.67350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.98550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.67350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.24850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.98550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 191 REMARK 465 SER A 192 REMARK 465 LEU A 373 REMARK 465 GLU A 374 REMARK 465 ILE A 375 REMARK 465 GLY A 376 REMARK 465 GLY A 377 REMARK 465 GLY B 191 REMARK 465 SER B 192 REMARK 465 GLU B 372 REMARK 465 LEU B 373 REMARK 465 GLU B 374 REMARK 465 ILE B 375 REMARK 465 GLY B 376 REMARK 465 GLY B 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN B 217 O HOH B 501 1.83 REMARK 500 OE1 GLU B 262 O HOH B 502 2.04 REMARK 500 NE2 HIS B 282 O HOH B 503 2.09 REMARK 500 OG1 THR A 303 O2' 1SY B 401 2.11 REMARK 500 O LYS B 220 O HOH B 504 2.11 REMARK 500 O TYR A 301 O HOH A 501 2.12 REMARK 500 OG SER B 355 OD1 ASP B 357 2.12 REMARK 500 OG1 THR B 303 O2' 1SY B 401 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 206 -82.25 -155.79 REMARK 500 LYS A 232 49.09 -94.20 REMARK 500 ASP A 289 65.73 -112.29 REMARK 500 TYR B 206 -82.22 -155.25 REMARK 500 LYS B 232 48.86 -94.00 REMARK 500 ASP B 289 64.78 -112.70 REMARK 500 PRO B 356 0.13 -68.75 REMARK 500 ASP B 370 47.16 -73.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1SY B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CFL RELATED DB: PDB REMARK 900 RELATED ID: 5CFM RELATED DB: PDB REMARK 900 RELATED ID: 5CFN RELATED DB: PDB REMARK 900 RELATED ID: 5CFO RELATED DB: PDB REMARK 900 RELATED ID: 5CFP RELATED DB: PDB REMARK 900 RELATED ID: 5CFR RELATED DB: PDB DBREF 5CFQ A 193 377 UNP A7SLZ2 A7SLZ2_NEMVE 193 377 DBREF 5CFQ B 193 377 UNP A7SLZ2 A7SLZ2_NEMVE 193 377 SEQADV 5CFQ GLY A 191 UNP A7SLZ2 EXPRESSION TAG SEQADV 5CFQ SER A 192 UNP A7SLZ2 EXPRESSION TAG SEQADV 5CFQ GLY B 191 UNP A7SLZ2 EXPRESSION TAG SEQADV 5CFQ SER B 192 UNP A7SLZ2 EXPRESSION TAG SEQRES 1 A 187 GLY SER ASN VAL ALA ASP GLY LEU ALA TRP SER TYR TYR SEQRES 2 A 187 PHE GLY TYR LEU LYS PHE VAL LEU PRO GLU LEU GLU LYS SEQRES 3 A 187 GLN ILE GLU LYS THR SER LYS PHE ARG SER LYS GLU LYS SEQRES 4 A 187 PHE VAL LYS LYS MET PHE ILE LEU ILE PRO SER ASN CYS SEQRES 5 A 187 PHE TRP ASP ASP LYS ILE PRO GLY SER ASP TYR ASP PRO SEQRES 6 A 187 GLN ASN ARG ILE THR PHE GLU GLY ASN THR GLU PRO LEU SEQRES 7 A 187 GLU LYS THR ARG GLY GLY VAL PHE LEU ARG HIS TYR LYS SEQRES 8 A 187 HIS SER VAL TYR GLU ILE LYS ASP GLY GLU ASN GLU PRO SEQRES 9 A 187 TRP PHE CYS ILE MET GLU TYR ALA THR PRO LEU LEU THR SEQRES 10 A 187 LEU TYR ASP MET SER VAL ALA GLN PRO GLY GLU LEU SER SEQRES 11 A 187 ARG GLU GLU ARG ASP ALA GLN VAL VAL VAL PHE LEU ARG SEQRES 12 A 187 LYS LEU GLN ASP ILE LEU GLU GLY ASP ARG ALA CYS GLN SEQRES 13 A 187 GLY LYS TYR GLU LEU VAL THR PHE SER PRO ASP ARG ASP SEQRES 14 A 187 LEU ALA ASP VAL MET LEU ARG LYS LEU LYS ASP SER GLU SEQRES 15 A 187 LEU GLU ILE GLY GLY SEQRES 1 B 187 GLY SER ASN VAL ALA ASP GLY LEU ALA TRP SER TYR TYR SEQRES 2 B 187 PHE GLY TYR LEU LYS PHE VAL LEU PRO GLU LEU GLU LYS SEQRES 3 B 187 GLN ILE GLU LYS THR SER LYS PHE ARG SER LYS GLU LYS SEQRES 4 B 187 PHE VAL LYS LYS MET PHE ILE LEU ILE PRO SER ASN CYS SEQRES 5 B 187 PHE TRP ASP ASP LYS ILE PRO GLY SER ASP TYR ASP PRO SEQRES 6 B 187 GLN ASN ARG ILE THR PHE GLU GLY ASN THR GLU PRO LEU SEQRES 7 B 187 GLU LYS THR ARG GLY GLY VAL PHE LEU ARG HIS TYR LYS SEQRES 8 B 187 HIS SER VAL TYR GLU ILE LYS ASP GLY GLU ASN GLU PRO SEQRES 9 B 187 TRP PHE CYS ILE MET GLU TYR ALA THR PRO LEU LEU THR SEQRES 10 B 187 LEU TYR ASP MET SER VAL ALA GLN PRO GLY GLU LEU SER SEQRES 11 B 187 ARG GLU GLU ARG ASP ALA GLN VAL VAL VAL PHE LEU ARG SEQRES 12 B 187 LYS LEU GLN ASP ILE LEU GLU GLY ASP ARG ALA CYS GLN SEQRES 13 B 187 GLY LYS TYR GLU LEU VAL THR PHE SER PRO ASP ARG ASP SEQRES 14 B 187 LEU ALA ASP VAL MET LEU ARG LYS LEU LYS ASP SER GLU SEQRES 15 B 187 LEU GLU ILE GLY GLY HET SO4 A 401 5 HET 1SY B 401 90 HET SO4 B 402 5 HETNAM SO4 SULFATE ION HETNAM 1SY CGAMP HETSYN 1SY 2',3' CGAMP; C-GMP-AMP; C[G(2',5')PA(3',5')P] FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 1SY C20 H24 N10 O13 P2 FORMUL 6 HOH *56(H2 O) HELIX 1 AA1 ASN A 193 GLY A 205 1 13 HELIX 2 AA2 TYR A 206 LEU A 211 1 6 HELIX 3 AA3 GLU A 213 LYS A 220 1 8 HELIX 4 AA4 THR A 221 SER A 226 1 6 HELIX 5 AA5 ALA A 302 GLN A 315 1 14 HELIX 6 AA6 SER A 320 GLY A 341 1 22 HELIX 7 AA7 ASP A 342 GLN A 346 5 5 HELIX 8 AA8 ASP A 359 SER A 371 1 13 HELIX 9 AA9 VAL B 194 GLY B 205 1 12 HELIX 10 AB1 TYR B 206 LEU B 211 1 6 HELIX 11 AB2 GLU B 213 GLU B 219 1 7 HELIX 12 AB3 THR B 221 SER B 226 1 6 HELIX 13 AB4 THR B 303 GLN B 315 1 13 HELIX 14 AB5 SER B 320 GLY B 341 1 22 HELIX 15 AB6 ASP B 342 GLN B 346 5 5 HELIX 16 AB7 ASP B 359 ASP B 370 1 12 SHEET 1 AA1 5 ILE A 259 ASN A 264 0 SHEET 2 AA1 5 SER A 283 ILE A 287 -1 O VAL A 284 N GLU A 262 SHEET 3 AA1 5 TRP A 295 TYR A 301 -1 O CYS A 297 N TYR A 285 SHEET 4 AA1 5 PHE A 230 PRO A 239 1 N LEU A 237 O GLU A 300 SHEET 5 AA1 5 TYR A 349 PHE A 354 1 O VAL A 352 N ILE A 236 SHEET 1 AA2 2 LEU A 268 ARG A 272 0 SHEET 2 AA2 2 VAL A 275 TYR A 280 -1 O TYR A 280 N LEU A 268 SHEET 1 AA3 5 ILE B 259 ASN B 264 0 SHEET 2 AA3 5 SER B 283 ILE B 287 -1 O GLU B 286 N THR B 260 SHEET 3 AA3 5 TRP B 295 TYR B 301 -1 O TRP B 295 N ILE B 287 SHEET 4 AA3 5 PHE B 230 PRO B 239 1 N LEU B 237 O GLU B 300 SHEET 5 AA3 5 TYR B 349 PHE B 354 1 O VAL B 352 N ILE B 236 SHEET 1 AA4 2 LEU B 268 ARG B 272 0 SHEET 2 AA4 2 VAL B 275 TYR B 280 -1 O TYR B 280 N LEU B 268 SITE 1 AC1 3 ARG A 321 GLU A 322 HIS B 279 SITE 1 AC2 29 SER A 201 TYR A 202 GLY A 205 TYR A 206 SITE 2 AC2 29 ARG A 272 ARG A 278 HIS A 279 TYR A 280 SITE 3 AC2 29 GLU A 300 THR A 303 PRO A 304 HOH A 502 SITE 4 AC2 29 HOH A 515 HOH A 517 SER B 201 TYR B 202 SITE 5 AC2 29 GLY B 205 TYR B 206 ARG B 272 ARG B 278 SITE 6 AC2 29 HIS B 279 TYR B 280 GLU B 300 THR B 303 SITE 7 AC2 29 PRO B 304 HOH B 508 HOH B 510 HOH B 515 SITE 8 AC2 29 HOH B 516 SITE 1 AC3 4 ARG A 321 ARG A 324 ARG B 321 ARG B 324 CRYST1 40.497 77.971 101.347 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024693 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012825 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009867 0.00000