HEADER DE NOVO PROTEIN 10-JUL-15 5CHB TITLE CRYSTAL STRUCTURE OF NVPIZZA2-S16H58 COORDINATING A CDCL2 NANOCRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: NVPIZZA2-S16H58; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS COMPUTATIONAL PROTEIN DESIGN, METALLOPROTEINS, CADMIUM, SYMMETRICAL KEYWDS 2 PROTEIN, BIOMINERALIZATION, NANO-CRYSTAL, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.R.D.VOET,H.NOGUCHI,C.ADDY,K.Y.J.ZHANG,J.R.H.TAME REVDAT 4 08-NOV-23 5CHB 1 LINK REVDAT 3 04-OCT-17 5CHB 1 JRNL REMARK REVDAT 2 02-SEP-15 5CHB 1 JRNL REVDAT 1 22-JUL-15 5CHB 0 SPRSDE 22-JUL-15 5CHB 4ZCO JRNL AUTH A.R.D.VOET,H.NOGUCHI,C.ADDY,K.Y.J.ZHANG,J.R.H.TAME JRNL TITL BIOMINERALIZATION OF A CADMIUM CHLORIDE NANOCRYSTAL BY A JRNL TITL 2 DESIGNED SYMMETRICAL PROTEIN JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 54 9857 2015 JRNL REFN ESSN 1521-3773 JRNL PMID 26136355 JRNL DOI 10.1002/ANIE.201503575 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0123 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33236 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1737 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2337 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2080 REMARK 3 BIN FREE R VALUE SET COUNT : 121 REMARK 3 BIN FREE R VALUE : 0.2380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1816 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : -1.24000 REMARK 3 B12 (A**2) : 0.19000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.073 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.367 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1881 ; 0.022 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1771 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2574 ; 2.129 ; 1.925 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4042 ; 1.153 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 6.757 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;28.890 ;25.143 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 256 ;12.744 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;14.843 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 329 ; 0.142 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2214 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 424 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1021 ; 2.382 ; 2.027 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1020 ; 2.328 ; 2.025 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1273 ; 3.455 ; 3.034 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5CHB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35015 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4ZCN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, CADMIUM CHLORIDE, REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.51933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 73.03867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 73.03867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.51933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -380.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -91.80000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 53.00075 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CD CD B 102 LIES ON A SPECIAL POSITION. REMARK 375 CD CD B 103 LIES ON A SPECIAL POSITION. REMARK 375 CD CD C 102 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 243 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 5 REMARK 465 SER A 6 REMARK 465 HIS A 7 REMARK 465 GLY B 5 REMARK 465 SER B 6 REMARK 465 HIS B 7 REMARK 465 GLY C 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 21 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 16 -65.45 -124.31 REMARK 500 THR A 56 90.41 79.35 REMARK 500 THR B 56 89.40 82.31 REMARK 500 SER C 16 -72.02 -120.95 REMARK 500 THR C 56 93.24 79.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD C 101 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 31 NE2 REMARK 620 2 HIS C 31 NE2 108.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 101 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 58 NE2 REMARK 620 2 HIS B 58 NE2 98.3 REMARK 620 3 HOH B 219 O 88.3 91.5 REMARK 620 4 HOH B 220 O 89.1 167.6 78.7 REMARK 620 5 HOH B 221 O 166.8 89.9 81.1 81.1 REMARK 620 6 HIS C 58 NE2 99.9 96.6 167.5 91.9 89.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 101 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 73 NE2 REMARK 620 2 HIS B 73 NE2 112.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B 102 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 31 NE2 REMARK 620 2 HIS B 31 NE2 0.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD C 102 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 73 NE2 REMARK 620 2 HIS C 73 NE2 0.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 105 DBREF 5CHB A 5 91 PDB 5CHB 5CHB 5 91 DBREF 5CHB B 5 91 PDB 5CHB 5CHB 5 91 DBREF 5CHB C 5 91 PDB 5CHB 5CHB 5 91 SEQRES 1 A 87 GLY SER HIS MET PHE THR GLY LEU ASN THR PRO SER GLY SEQRES 2 A 87 VAL ALA VAL ASP SER ALA GLY THR VAL TYR VAL THR ASP SEQRES 3 A 87 HIS GLY ASN ASN ARG VAL VAL LYS LEU ALA ALA GLY SER SEQRES 4 A 87 ASN THR GLN THR VAL LEU PRO PHE THR GLY LEU ASN THR SEQRES 5 A 87 PRO HIS GLY VAL ALA VAL ASP SER ALA GLY THR VAL TYR SEQRES 6 A 87 VAL THR ASP HIS GLY ASN ASN ARG VAL VAL LYS LEU ALA SEQRES 7 A 87 ALA GLY SER ASN THR GLN THR VAL LEU SEQRES 1 B 87 GLY SER HIS MET PHE THR GLY LEU ASN THR PRO SER GLY SEQRES 2 B 87 VAL ALA VAL ASP SER ALA GLY THR VAL TYR VAL THR ASP SEQRES 3 B 87 HIS GLY ASN ASN ARG VAL VAL LYS LEU ALA ALA GLY SER SEQRES 4 B 87 ASN THR GLN THR VAL LEU PRO PHE THR GLY LEU ASN THR SEQRES 5 B 87 PRO HIS GLY VAL ALA VAL ASP SER ALA GLY THR VAL TYR SEQRES 6 B 87 VAL THR ASP HIS GLY ASN ASN ARG VAL VAL LYS LEU ALA SEQRES 7 B 87 ALA GLY SER ASN THR GLN THR VAL LEU SEQRES 1 C 87 GLY SER HIS MET PHE THR GLY LEU ASN THR PRO SER GLY SEQRES 2 C 87 VAL ALA VAL ASP SER ALA GLY THR VAL TYR VAL THR ASP SEQRES 3 C 87 HIS GLY ASN ASN ARG VAL VAL LYS LEU ALA ALA GLY SER SEQRES 4 C 87 ASN THR GLN THR VAL LEU PRO PHE THR GLY LEU ASN THR SEQRES 5 C 87 PRO HIS GLY VAL ALA VAL ASP SER ALA GLY THR VAL TYR SEQRES 6 C 87 VAL THR ASP HIS GLY ASN ASN ARG VAL VAL LYS LEU ALA SEQRES 7 C 87 ALA GLY SER ASN THR GLN THR VAL LEU HET CD A 101 1 HET CD B 101 1 HET CD B 102 1 HET CD B 103 1 HET CL B 104 1 HET CL B 105 1 HET CL B 106 1 HET SO4 B 107 5 HET CD C 101 1 HET CD C 102 1 HET CL C 103 1 HET CL C 104 1 HET CL C 105 1 HETNAM CD CADMIUM ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 4 CD 6(CD 2+) FORMUL 8 CL 6(CL 1-) FORMUL 11 SO4 O4 S 2- FORMUL 17 HOH *164(H2 O) HELIX 1 AA1 GLY A 74 ASN A 76 5 3 HELIX 2 AA2 HIS B 31 ASN B 34 5 4 HELIX 3 AA3 GLY B 74 ASN B 76 5 3 HELIX 4 AA4 HIS C 31 ASN C 34 5 4 HELIX 5 AA5 HIS C 73 ASN C 76 5 4 SHEET 1 AA1 4 VAL A 18 VAL A 20 0 SHEET 2 AA1 4 VAL A 26 ASP A 30 -1 O TYR A 27 N ALA A 19 SHEET 3 AA1 4 ARG A 35 LEU A 39 -1 O VAL A 37 N VAL A 28 SHEET 4 AA1 4 GLN A 46 VAL A 48 -1 O THR A 47 N LYS A 38 SHEET 1 AA2 4 PRO A 57 VAL A 62 0 SHEET 2 AA2 4 VAL A 68 ASP A 72 -1 O TYR A 69 N ALA A 61 SHEET 3 AA2 4 ARG A 77 LEU A 81 -1 O ARG A 77 N ASP A 72 SHEET 4 AA2 4 THR A 89 LEU A 91 -1 O LEU A 91 N VAL A 78 SHEET 1 AA3 4 VAL B 18 VAL B 20 0 SHEET 2 AA3 4 VAL B 26 ASP B 30 -1 O TYR B 27 N ALA B 19 SHEET 3 AA3 4 ARG B 35 LEU B 39 -1 O VAL B 37 N VAL B 28 SHEET 4 AA3 4 THR B 47 VAL B 48 -1 O THR B 47 N LYS B 38 SHEET 1 AA4 4 PRO B 57 VAL B 62 0 SHEET 2 AA4 4 VAL B 68 ASP B 72 -1 O TYR B 69 N ALA B 61 SHEET 3 AA4 4 ARG B 77 LEU B 81 -1 O ARG B 77 N ASP B 72 SHEET 4 AA4 4 THR B 89 VAL B 90 -1 O THR B 89 N LYS B 80 SHEET 1 AA5 4 VAL C 18 VAL C 20 0 SHEET 2 AA5 4 VAL C 26 ASP C 30 -1 O TYR C 27 N ALA C 19 SHEET 3 AA5 4 ARG C 35 LEU C 39 -1 O VAL C 37 N VAL C 28 SHEET 4 AA5 4 THR C 47 VAL C 48 -1 O THR C 47 N LYS C 38 SHEET 1 AA6 4 ALA C 61 VAL C 62 0 SHEET 2 AA6 4 VAL C 68 ASP C 72 -1 O TYR C 69 N ALA C 61 SHEET 3 AA6 4 ARG C 77 LEU C 81 -1 O ARG C 77 N ASP C 72 SHEET 4 AA6 4 THR C 89 VAL C 90 -1 O THR C 89 N LYS C 80 LINK NE2 HIS A 31 CD CD C 101 1555 4465 2.32 LINK NE2 HIS A 58 CD CD A 101 1555 1555 2.36 LINK NE2 HIS A 73 CD CD B 101 1555 4465 2.38 LINK CD CD A 101 NE2 HIS B 58 1555 1555 2.34 LINK CD CD A 101 O HOH B 219 1555 1555 2.40 LINK CD CD A 101 O HOH B 220 1555 1555 2.41 LINK CD CD A 101 O HOH B 221 1555 1555 2.40 LINK CD CD A 101 NE2 HIS C 58 1555 1555 2.32 LINK NE2 HIS B 31 CD CD B 102 1555 1555 2.33 LINK NE2 HIS B 31 CD CD B 102 1555 4465 2.33 LINK NE2 HIS B 73 CD CD B 101 1555 1555 2.37 LINK NE2 HIS C 31 CD CD C 101 1555 1555 2.29 LINK NE2 HIS C 73 CD CD C 102 1555 1555 2.39 LINK NE2 HIS C 73 CD CD C 102 1555 4465 2.38 SITE 1 AC1 6 HIS A 58 HIS B 58 HOH B 219 HOH B 220 SITE 2 AC1 6 HOH B 221 HIS C 58 SITE 1 AC2 6 HIS A 73 HIS B 73 CL B 104 CL B 105 SITE 2 AC2 6 CL B 106 CL C 105 SITE 1 AC3 3 HIS B 31 CL B 104 CL B 105 SITE 1 AC4 3 CL B 104 CL B 106 CL C 104 SITE 1 AC5 7 HIS A 58 HIS B 31 CD B 101 CD B 102 SITE 2 AC5 7 CD B 103 CL B 105 CL B 106 SITE 1 AC6 6 HIS B 31 HIS B 58 HIS B 73 CD B 101 SITE 2 AC6 6 CD B 102 CL B 104 SITE 1 AC7 8 HIS B 58 CD B 101 CD B 103 CL B 104 SITE 2 AC7 8 HIS C 31 CD C 101 CL C 104 CL C 105 SITE 1 AC8 15 GLY A 17 GLY A 59 GLY B 17 GLY B 59 SITE 2 AC8 15 HOH B 201 HOH B 203 HOH B 204 HOH B 212 SITE 3 AC8 15 HOH B 215 HOH B 216 HOH B 219 HOH B 220 SITE 4 AC8 15 HOH B 221 GLY C 17 GLY C 59 SITE 1 AC9 6 HIS A 31 CL B 106 HIS C 31 CL C 103 SITE 2 AC9 6 CL C 104 CL C 105 SITE 1 AD1 3 HIS C 73 CL C 103 CL C 104 SITE 1 AD2 7 HIS A 31 HIS C 31 HIS C 58 HIS C 73 SITE 2 AD2 7 CD C 101 CD C 102 CL C 104 SITE 1 AD3 6 HIS A 31 CD B 103 CL B 106 CD C 101 SITE 2 AD3 6 CD C 102 CL C 103 SITE 1 AD4 7 HIS A 31 HIS A 58 HIS A 73 CD B 101 SITE 2 AD4 7 CL B 106 HIS C 31 CD C 101 CRYST1 61.200 61.200 109.558 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016340 0.009434 0.000000 0.00000 SCALE2 0.000000 0.018868 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009128 0.00000