HEADER TRANSFERASE 11-JUL-15 5CI6 TITLE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA MPK6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 6; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 29-395; COMPND 5 SYNONYM: MAP KINASE 6; COMPND 6 EC: 2.7.11.24; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: MPK6, AT2G43790, F18O19.10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS KINASE, APOENZYME, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.QIN,P.LI,Z.CHEN,D.REN REVDAT 2 08-NOV-23 5CI6 1 REMARK REVDAT 1 25-MAY-16 5CI6 0 JRNL AUTH B.WANG,X.QIN,J.WU,H.DENG,Y.LI,H.YANG,Z.CHEN,G.LIU,D.REN JRNL TITL ANALYSIS OF CRYSTAL STRUCTURE OF ARABIDOPSIS MPK6 AND JRNL TITL 2 GENERATION OF ITS MUTANTS WITH HIGHER ACTIVITY JRNL REF SCI REP V. 6 25646 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27160427 JRNL DOI 10.1038/SREP25646 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 21377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1163 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1553 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3260 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5447 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 96.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.16000 REMARK 3 B22 (A**2) : 4.16000 REMARK 3 B33 (A**2) : -8.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.281 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.950 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5570 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5298 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7572 ; 1.370 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12169 ; 1.119 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 678 ; 6.373 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 264 ;36.491 ;24.280 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 937 ;17.583 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;22.745 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 859 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6259 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1257 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 32 393 B 32 393 19001 0.14 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5CI6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97923 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24998 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ERK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRATE, 10-12% PEG 20000, PH REMARK 280 6.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.54133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.08267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.08267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.54133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 26 REMARK 465 HIS A 27 REMARK 465 MET A 28 REMARK 465 GLN A 29 REMARK 465 MET A 30 REMARK 465 PRO A 31 REMARK 465 GLY A 70 REMARK 465 LYS A 71 REMARK 465 GLY A 72 REMARK 465 ALA A 73 REMARK 465 TYR A 74 REMARK 465 GLY A 75 REMARK 465 VAL A 213 REMARK 465 THR A 214 REMARK 465 SER A 215 REMARK 465 GLU A 216 REMARK 465 SER A 217 REMARK 465 ASP A 218 REMARK 465 PHE A 219 REMARK 465 MET A 220 REMARK 465 THR A 221 REMARK 465 GLU A 222 REMARK 465 TYR A 223 REMARK 465 VAL A 224 REMARK 465 PHE A 366 REMARK 465 ASP A 367 REMARK 465 PHE A 368 REMARK 465 GLU A 369 REMARK 465 ASN A 370 REMARK 465 HIS A 371 REMARK 465 ALA A 372 REMARK 465 LEU A 373 REMARK 465 SER A 374 REMARK 465 GLN A 394 REMARK 465 GLN A 395 REMARK 465 GLY B 26 REMARK 465 HIS B 27 REMARK 465 MET B 28 REMARK 465 GLN B 29 REMARK 465 MET B 30 REMARK 465 PRO B 31 REMARK 465 SER B 215 REMARK 465 GLU B 216 REMARK 465 SER B 217 REMARK 465 ASP B 218 REMARK 465 PHE B 219 REMARK 465 MET B 220 REMARK 465 THR B 221 REMARK 465 GLU B 222 REMARK 465 TYR B 223 REMARK 465 VAL B 224 REMARK 465 GLU B 285 REMARK 465 GLU B 286 REMARK 465 GLU B 287 REMARK 465 GLN B 395 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 98 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 ARG A 106 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 138 OD1 ND2 REMARK 470 ARG A 188 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 384 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 387 CG CD1 CD2 REMARK 470 LYS B 71 CG CD CE NZ REMARK 470 TYR B 74 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 106 NE CZ NH1 NH2 REMARK 470 ARG B 212 CZ NH1 NH2 REMARK 470 ARG B 227 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 267 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 288 CG CD1 CD2 REMARK 470 PHE B 290 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 293 CG CD OE1 OE2 REMARK 470 LYS B 296 CG CD CE NZ REMARK 470 ARG B 297 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 298 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 300 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 306 CG CD REMARK 470 LYS B 313 CG CD CE NZ REMARK 470 GLU B 326 CG CD OE1 OE2 REMARK 470 LYS B 327 CG CD CE NZ REMARK 470 PHE B 331 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 377 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 330 NH1 ARG B 336 1.74 REMARK 500 O LEU A 186 CB ALA A 211 2.11 REMARK 500 O GLU B 34 N ILE B 36 2.17 REMARK 500 CE1 HIS B 116 OD1 ASN B 365 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 306 C - N - CA ANGL. DEV. = 11.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 35 -102.20 67.67 REMARK 500 HIS A 42 72.86 46.21 REMARK 500 ASN A 86 -3.17 68.35 REMARK 500 ASN A 138 -61.36 -135.20 REMARK 500 ARG A 188 -0.68 76.07 REMARK 500 ASP A 189 29.37 -146.66 REMARK 500 ASN A 237 -126.06 62.55 REMARK 500 SER A 238 71.40 60.48 REMARK 500 LEU A 279 -62.71 -105.91 REMARK 500 GLU A 285 -70.72 -47.58 REMARK 500 PHE A 290 -51.08 -133.17 REMARK 500 LEU A 291 177.71 -58.43 REMARK 500 GLU A 357 71.18 -117.57 REMARK 500 PRO A 363 -168.86 -73.66 REMARK 500 GLU A 376 -49.01 -130.94 REMARK 500 ASN B 35 -58.31 65.85 REMARK 500 HIS B 42 71.54 46.40 REMARK 500 LYS B 71 -162.81 -75.30 REMARK 500 TYR B 74 -7.87 82.80 REMARK 500 ASN B 86 -2.69 68.40 REMARK 500 ASN B 138 -59.28 -134.28 REMARK 500 ARG B 188 -13.94 81.33 REMARK 500 ASP B 207 63.24 62.75 REMARK 500 LEU B 279 -62.19 -105.79 REMARK 500 PHE B 290 -50.74 -131.86 REMARK 500 GLU B 357 71.84 -116.64 REMARK 500 PHE B 364 -118.45 67.81 REMARK 500 HIS B 371 -137.05 52.70 REMARK 500 GLU B 375 -16.66 -49.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU B 210 ALA B 211 -149.04 REMARK 500 REMARK 500 REMARK: NULL DBREF 5CI6 A 29 395 UNP Q39026 MPK6_ARATH 29 395 DBREF 5CI6 B 29 395 UNP Q39026 MPK6_ARATH 29 395 SEQADV 5CI6 GLY A 26 UNP Q39026 EXPRESSION TAG SEQADV 5CI6 HIS A 27 UNP Q39026 EXPRESSION TAG SEQADV 5CI6 MET A 28 UNP Q39026 EXPRESSION TAG SEQADV 5CI6 GLY B 26 UNP Q39026 EXPRESSION TAG SEQADV 5CI6 HIS B 27 UNP Q39026 EXPRESSION TAG SEQADV 5CI6 MET B 28 UNP Q39026 EXPRESSION TAG SEQRES 1 A 370 GLY HIS MET GLN MET PRO GLY ILE GLU ASN ILE PRO ALA SEQRES 2 A 370 THR LEU SER HIS GLY GLY ARG PHE ILE GLN TYR ASN ILE SEQRES 3 A 370 PHE GLY ASN ILE PHE GLU VAL THR ALA LYS TYR LYS PRO SEQRES 4 A 370 PRO ILE MET PRO ILE GLY LYS GLY ALA TYR GLY ILE VAL SEQRES 5 A 370 CYS SER ALA MET ASN SER GLU THR ASN GLU SER VAL ALA SEQRES 6 A 370 ILE LYS LYS ILE ALA ASN ALA PHE ASP ASN LYS ILE ASP SEQRES 7 A 370 ALA LYS ARG THR LEU ARG GLU ILE LYS LEU LEU ARG HIS SEQRES 8 A 370 MET ASP HIS GLU ASN ILE VAL ALA ILE ARG ASP ILE ILE SEQRES 9 A 370 PRO PRO PRO LEU ARG ASN ALA PHE ASN ASP VAL TYR ILE SEQRES 10 A 370 ALA TYR GLU LEU MET ASP THR ASP LEU HIS GLN ILE ILE SEQRES 11 A 370 ARG SER ASN GLN ALA LEU SER GLU GLU HIS CYS GLN TYR SEQRES 12 A 370 PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR ILE HIS SEQRES 13 A 370 SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SER ASN SEQRES 14 A 370 LEU LEU LEU ASN ALA ASN CYS ASP LEU LYS ILE CYS ASP SEQRES 15 A 370 PHE GLY LEU ALA ARG VAL THR SER GLU SER ASP PHE MET SEQRES 16 A 370 THR GLU TYR VAL VAL THR ARG TRP TYR ARG ALA PRO GLU SEQRES 17 A 370 LEU LEU LEU ASN SER SER ASP TYR THR ALA ALA ILE ASP SEQRES 18 A 370 VAL TRP SER VAL GLY CYS ILE PHE MET GLU LEU MET ASP SEQRES 19 A 370 ARG LYS PRO LEU PHE PRO GLY ARG ASP HIS VAL HIS GLN SEQRES 20 A 370 LEU ARG LEU LEU MET GLU LEU ILE GLY THR PRO SER GLU SEQRES 21 A 370 GLU GLU LEU GLU PHE LEU ASN GLU ASN ALA LYS ARG TYR SEQRES 22 A 370 ILE ARG GLN LEU PRO PRO TYR PRO ARG GLN SER ILE THR SEQRES 23 A 370 ASP LYS PHE PRO THR VAL HIS PRO LEU ALA ILE ASP LEU SEQRES 24 A 370 ILE GLU LYS MET LEU THR PHE ASP PRO ARG ARG ARG ILE SEQRES 25 A 370 THR VAL LEU ASP ALA LEU ALA HIS PRO TYR LEU ASN SER SEQRES 26 A 370 LEU HIS ASP ILE SER ASP GLU PRO GLU CYS THR ILE PRO SEQRES 27 A 370 PHE ASN PHE ASP PHE GLU ASN HIS ALA LEU SER GLU GLU SEQRES 28 A 370 GLN MET LYS GLU LEU ILE TYR ARG GLU ALA LEU ALA PHE SEQRES 29 A 370 ASN PRO GLU TYR GLN GLN SEQRES 1 B 370 GLY HIS MET GLN MET PRO GLY ILE GLU ASN ILE PRO ALA SEQRES 2 B 370 THR LEU SER HIS GLY GLY ARG PHE ILE GLN TYR ASN ILE SEQRES 3 B 370 PHE GLY ASN ILE PHE GLU VAL THR ALA LYS TYR LYS PRO SEQRES 4 B 370 PRO ILE MET PRO ILE GLY LYS GLY ALA TYR GLY ILE VAL SEQRES 5 B 370 CYS SER ALA MET ASN SER GLU THR ASN GLU SER VAL ALA SEQRES 6 B 370 ILE LYS LYS ILE ALA ASN ALA PHE ASP ASN LYS ILE ASP SEQRES 7 B 370 ALA LYS ARG THR LEU ARG GLU ILE LYS LEU LEU ARG HIS SEQRES 8 B 370 MET ASP HIS GLU ASN ILE VAL ALA ILE ARG ASP ILE ILE SEQRES 9 B 370 PRO PRO PRO LEU ARG ASN ALA PHE ASN ASP VAL TYR ILE SEQRES 10 B 370 ALA TYR GLU LEU MET ASP THR ASP LEU HIS GLN ILE ILE SEQRES 11 B 370 ARG SER ASN GLN ALA LEU SER GLU GLU HIS CYS GLN TYR SEQRES 12 B 370 PHE LEU TYR GLN ILE LEU ARG GLY LEU LYS TYR ILE HIS SEQRES 13 B 370 SER ALA ASN VAL LEU HIS ARG ASP LEU LYS PRO SER ASN SEQRES 14 B 370 LEU LEU LEU ASN ALA ASN CYS ASP LEU LYS ILE CYS ASP SEQRES 15 B 370 PHE GLY LEU ALA ARG VAL THR SER GLU SER ASP PHE MET SEQRES 16 B 370 THR GLU TYR VAL VAL THR ARG TRP TYR ARG ALA PRO GLU SEQRES 17 B 370 LEU LEU LEU ASN SER SER ASP TYR THR ALA ALA ILE ASP SEQRES 18 B 370 VAL TRP SER VAL GLY CYS ILE PHE MET GLU LEU MET ASP SEQRES 19 B 370 ARG LYS PRO LEU PHE PRO GLY ARG ASP HIS VAL HIS GLN SEQRES 20 B 370 LEU ARG LEU LEU MET GLU LEU ILE GLY THR PRO SER GLU SEQRES 21 B 370 GLU GLU LEU GLU PHE LEU ASN GLU ASN ALA LYS ARG TYR SEQRES 22 B 370 ILE ARG GLN LEU PRO PRO TYR PRO ARG GLN SER ILE THR SEQRES 23 B 370 ASP LYS PHE PRO THR VAL HIS PRO LEU ALA ILE ASP LEU SEQRES 24 B 370 ILE GLU LYS MET LEU THR PHE ASP PRO ARG ARG ARG ILE SEQRES 25 B 370 THR VAL LEU ASP ALA LEU ALA HIS PRO TYR LEU ASN SER SEQRES 26 B 370 LEU HIS ASP ILE SER ASP GLU PRO GLU CYS THR ILE PRO SEQRES 27 B 370 PHE ASN PHE ASP PHE GLU ASN HIS ALA LEU SER GLU GLU SEQRES 28 B 370 GLN MET LYS GLU LEU ILE TYR ARG GLU ALA LEU ALA PHE SEQRES 29 B 370 ASN PRO GLU TYR GLN GLN FORMUL 3 HOH *6(H2 O) HELIX 1 AA1 ASN A 100 MET A 117 1 18 HELIX 2 AA2 LEU A 133 PHE A 137 5 5 HELIX 3 AA3 LEU A 151 SER A 157 1 7 HELIX 4 AA4 SER A 162 ALA A 183 1 22 HELIX 5 AA5 LYS A 191 SER A 193 5 3 HELIX 6 AA6 ALA A 231 LEU A 236 1 6 HELIX 7 AA7 ALA A 243 ARG A 260 1 18 HELIX 8 AA8 ASP A 268 GLY A 281 1 14 HELIX 9 AA9 ASN A 292 LEU A 302 1 11 HELIX 10 AB1 SER A 309 PHE A 314 1 6 HELIX 11 AB2 HIS A 318 LEU A 329 1 12 HELIX 12 AB3 ASP A 332 ARG A 336 5 5 HELIX 13 AB4 THR A 338 ALA A 344 1 7 HELIX 14 AB5 HIS A 345 ASN A 349 5 5 HELIX 15 AB6 ASP A 353 GLU A 357 5 5 HELIX 16 AB7 GLN A 377 ASN A 390 1 14 HELIX 17 AB8 ASN B 100 MET B 117 1 18 HELIX 18 AB9 LEU B 151 SER B 157 1 7 HELIX 19 AC1 SER B 162 ALA B 183 1 22 HELIX 20 AC2 LYS B 191 SER B 193 5 3 HELIX 21 AC3 ALA B 231 LEU B 236 1 6 HELIX 22 AC4 ALA B 243 ARG B 260 1 18 HELIX 23 AC5 ASP B 268 GLY B 281 1 14 HELIX 24 AC6 ASN B 292 LEU B 302 1 11 HELIX 25 AC7 SER B 309 PHE B 314 1 6 HELIX 26 AC8 HIS B 318 LEU B 329 1 12 HELIX 27 AC9 THR B 338 ALA B 344 1 7 HELIX 28 AD1 HIS B 345 ASN B 349 5 5 HELIX 29 AD2 ASP B 353 GLU B 357 5 5 HELIX 30 AD3 SER B 374 ASN B 390 1 17 SHEET 1 AA1 3 ALA A 38 SER A 41 0 SHEET 2 AA1 3 PHE A 46 TYR A 49 -1 O PHE A 46 N SER A 41 SHEET 3 AA1 3 PHE A 56 THR A 59 -1 O PHE A 56 N TYR A 49 SHEET 1 AA2 5 MET A 67 PRO A 68 0 SHEET 2 AA2 5 VAL A 77 MET A 81 -1 O SER A 79 N MET A 67 SHEET 3 AA2 5 SER A 88 ILE A 94 -1 O ILE A 91 N CYS A 78 SHEET 4 AA2 5 VAL A 140 GLU A 145 -1 O ILE A 142 N LYS A 92 SHEET 5 AA2 5 ILE A 125 ILE A 128 -1 N ASP A 127 O ALA A 143 SHEET 1 AA3 3 THR A 149 ASP A 150 0 SHEET 2 AA3 3 LEU A 195 LEU A 197 -1 O LEU A 197 N THR A 149 SHEET 3 AA3 3 LEU A 203 ILE A 205 -1 O LYS A 204 N LEU A 196 SHEET 1 AA4 3 ALA B 38 SER B 41 0 SHEET 2 AA4 3 PHE B 46 TYR B 49 -1 O PHE B 46 N SER B 41 SHEET 3 AA4 3 PHE B 56 THR B 59 -1 O VAL B 58 N ILE B 47 SHEET 1 AA5 5 MET B 67 GLY B 70 0 SHEET 2 AA5 5 VAL B 77 MET B 81 -1 O SER B 79 N MET B 67 SHEET 3 AA5 5 SER B 88 ILE B 94 -1 O VAL B 89 N ALA B 80 SHEET 4 AA5 5 VAL B 140 GLU B 145 -1 O VAL B 140 N ILE B 94 SHEET 5 AA5 5 ILE B 125 ILE B 128 -1 N ASP B 127 O ALA B 143 SHEET 1 AA6 3 THR B 149 ASP B 150 0 SHEET 2 AA6 3 LEU B 195 LEU B 197 -1 O LEU B 197 N THR B 149 SHEET 3 AA6 3 LEU B 203 ILE B 205 -1 O LYS B 204 N LEU B 196 CISPEP 1 PRO A 64 PRO A 65 0 -1.55 CISPEP 2 PRO B 64 PRO B 65 0 0.24 CISPEP 3 ILE B 69 GLY B 70 0 19.67 CISPEP 4 GLY B 72 ALA B 73 0 15.42 CISPEP 5 PRO B 333 ARG B 334 0 9.63 CISPEP 6 PHE B 364 ASN B 365 0 2.19 CISPEP 7 PHE B 366 ASP B 367 0 -10.54 CRYST1 150.513 150.513 85.624 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006644 0.003836 0.000000 0.00000 SCALE2 0.000000 0.007672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011679 0.00000