HEADER OXIDOREDUCTASE 14-JUL-15 5CJE TITLE STRUCTURE OF CYP107L2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 HYDROXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYTOCHROME P450 107L2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVERMITILIS MA-4680; SOURCE 3 ORGANISM_TAXID: 227882; SOURCE 4 STRAIN: MA-4680; SOURCE 5 GENE: CYP8, SAV_1987; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS STREPTOMYCES AVERMITILIS, P450, CYP107L2, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.-V.PHAM,S.-H.HAN,J.-H.KIM,D.-H.KIM,L.-W.KANG REVDAT 2 08-NOV-23 5CJE 1 REMARK REVDAT 1 20-JUL-16 5CJE 0 JRNL AUTH T.-V.PHAM,S.-H.HAN,J.-H.KIM,D.-H.KIM,L.-W.KANG JRNL TITL STRUCTURE OF CYP107L2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 13540 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 713 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 980 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.3980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3010 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.765 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.313 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.236 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.747 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3132 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3005 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4281 ; 1.624 ; 2.012 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6895 ; 1.021 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 389 ; 6.471 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;28.421 ;22.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 486 ;16.424 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;17.494 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 478 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3532 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 689 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1559 ; 2.625 ; 3.956 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1558 ; 2.626 ; 3.956 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1947 ; 4.005 ; 5.929 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1948 ; 4.004 ; 5.929 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1573 ; 3.382 ; 4.356 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1571 ; 3.384 ; 4.357 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2334 ; 5.408 ; 6.367 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3528 ; 7.332 ;31.512 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3528 ; 7.332 ;31.512 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5CJE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211748. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97952 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14255 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.47400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2CD8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE, IMIDAZOLE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 55.09200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.29250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 55.09200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.29250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 559 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASN A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 387 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 505 O HOH A 568 4444 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 113 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 137 -61.73 -152.09 REMARK 500 VAL A 152 53.01 -145.63 REMARK 500 THR A 171 -73.67 -94.15 REMARK 500 ASP A 214 94.29 -162.45 REMARK 500 ASP A 215 -39.61 -39.89 REMARK 500 LEU A 218 108.83 -160.91 REMARK 500 HIS A 235 -55.62 -123.47 REMARK 500 GLU A 236 -2.62 -56.23 REMARK 500 THR A 237 -39.04 -130.90 REMARK 500 THR A 264 -32.31 -39.95 REMARK 500 ALA A 330 52.16 39.04 REMARK 500 MET A 381 33.08 -88.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 575 DISTANCE = 6.53 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 344 SG REMARK 620 2 HEM A 402 NA 96.0 REMARK 620 3 HEM A 402 NB 85.4 89.2 REMARK 620 4 HEM A 402 NC 87.6 176.0 89.4 REMARK 620 5 HEM A 402 ND 96.4 90.6 178.2 90.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 402 DBREF 5CJE A 1 393 UNP Q82LM3 Q82LM3_STRAW 1 393 SEQRES 1 A 393 MET GLY ASN VAL ILE ASP LEU GLY GLU TYR GLY ALA ARG SEQRES 2 A 393 PHE THR GLU ASP PRO TYR PRO VAL TYR ALA GLU LEU ARG SEQRES 3 A 393 GLU ARG GLY PRO VAL HIS TRP VAL ARG THR PRO PRO PRO SEQRES 4 A 393 GLU ALA PHE GLU GLY TRP LEU VAL VAL GLY HIS GLU GLU SEQRES 5 A 393 ALA ARG ALA ALA LEU ALA ASP PRO ARG LEU SER LYS ASP SEQRES 6 A 393 GLY THR LYS LYS GLY LEU THR SER LEU ASP VAL GLU LEU SEQRES 7 A 393 MET GLY PRO TYR LEU LEU VAL VAL ASP PRO PRO GLU HIS SEQRES 8 A 393 THR ARG LEU ARG SER LEU VAL ALA ARG ALA PHE THR MET SEQRES 9 A 393 ARG ARG VAL GLU ALA LEU ARG PRO ARG ILE GLN GLU ILE SEQRES 10 A 393 THR ASP GLY LEU LEU ASP GLU MET LEU PRO ARG GLY ARG SEQRES 11 A 393 ALA ASP LEU VAL ASP SER PHE ALA TYR PRO LEU PRO ILE SEQRES 12 A 393 THR VAL ILE CYS GLU LEU LEU GLY VAL PRO ASP ILE ASP SEQRES 13 A 393 ARG VAL THR PHE ARG ALA LEU SER ASN GLU ILE VAL ALA SEQRES 14 A 393 PRO THR GLY GLY ASP ALA GLU LEU ALA ALA TYR GLU ARG SEQRES 15 A 393 LEU ALA ALA TYR LEU ASP GLU LEU ILE ASP ASP LYS ARG SEQRES 16 A 393 SER THR ALA PRO ALA ASP ASP LEU LEU GLY ASP LEU ILE SEQRES 17 A 393 ARG THR ARG ALA GLU ASP ASP ASP ARG LEU SER GLY GLU SEQRES 18 A 393 GLU LEU ARG ALA MET ALA PHE ILE LEU LEU VAL ALA GLY SEQRES 19 A 393 HIS GLU THR THR VAL ASN LEU ILE THR ASN GLY VAL HIS SEQRES 20 A 393 THR LEU LEU THR HIS PRO ASP GLN LEU ALA ALA LEU ARG SEQRES 21 A 393 ALA ASP MET THR LEU LEU ASP GLY ALA VAL GLU GLU VAL SEQRES 22 A 393 LEU ARG PHE GLU GLY PRO VAL GLU THR ALA THR TYR ARG SEQRES 23 A 393 TYR ALA ALA GLU SER MET GLU ILE GLY GLY THR ALA ILE SEQRES 24 A 393 ALA GLU GLY ASP PRO VAL MET ILE GLY LEU ASP ALA ALA SEQRES 25 A 393 GLY ARG ASP PRO ALA ARG HIS PRO ASP PRO HIS VAL PHE SEQRES 26 A 393 ASP ILE HIS ARG ALA PRO GLN GLY HIS LEU ALA PHE GLY SEQRES 27 A 393 HIS GLY ILE HIS TYR CYS LEU GLY ALA PRO LEU ALA ARG SEQRES 28 A 393 LEU GLU ALA ARG VAL ALA LEU ARG SER LEU LEU GLU ARG SEQRES 29 A 393 CYS PRO ASP LEU ALA LEU ASP GLY PRO PRO GLY ALA ARG SEQRES 30 A 393 PRO PRO GLY MET LEU ILE ARG GLY VAL ARG ARG LEU PRO SEQRES 31 A 393 VAL ARG TRP HET GOL A 401 6 HET HEM A 402 43 HETNAM GOL GLYCEROL HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN HEM HEME FORMUL 2 GOL C3 H8 O3 FORMUL 3 HEM C34 H32 FE N4 O4 FORMUL 4 HOH *75(H2 O) HELIX 1 AA1 TYR A 10 ASP A 17 1 8 HELIX 2 AA2 PRO A 18 ARG A 28 1 11 HELIX 3 AA3 GLY A 49 ALA A 58 1 10 HELIX 4 AA4 ASP A 65 GLY A 70 5 6 HELIX 5 AA5 SER A 73 MET A 79 1 7 HELIX 6 AA6 TYR A 82 VAL A 86 5 5 HELIX 7 AA7 PRO A 89 ALA A 99 1 11 HELIX 8 AA8 ARG A 100 PHE A 102 5 3 HELIX 9 AA9 THR A 103 GLU A 108 1 6 HELIX 10 AB1 LEU A 110 LEU A 126 1 17 HELIX 11 AB2 LEU A 133 PHE A 137 1 5 HELIX 12 AB3 TYR A 139 GLY A 151 1 13 HELIX 13 AB4 ASP A 156 ALA A 169 1 14 HELIX 14 AB5 GLY A 172 SER A 196 1 25 HELIX 15 AB6 ASP A 202 ASP A 214 1 13 HELIX 16 AB7 SER A 219 THR A 237 1 19 HELIX 17 AB8 THR A 237 HIS A 252 1 16 HELIX 18 AB9 HIS A 252 ASP A 262 1 11 HELIX 19 AC1 LEU A 265 GLU A 277 1 13 HELIX 20 AC2 GLY A 308 ARG A 314 1 7 HELIX 21 AC3 ASP A 326 ALA A 330 5 5 HELIX 22 AC4 GLY A 346 CYS A 365 1 20 SHEET 1 AA1 4 ILE A 5 ASP A 6 0 SHEET 2 AA1 4 VAL A 31 ARG A 35 1 O ARG A 35 N ILE A 5 SHEET 3 AA1 4 GLU A 43 VAL A 47 -1 O LEU A 46 N HIS A 32 SHEET 4 AA1 4 VAL A 305 ILE A 307 1 O MET A 306 N TRP A 45 SHEET 1 AA2 2 LEU A 62 SER A 63 0 SHEET 2 AA2 2 TYR A 287 ALA A 288 -1 O TYR A 287 N SER A 63 SHEET 1 AA3 3 ARG A 130 ASP A 132 0 SHEET 2 AA3 3 PRO A 390 ARG A 392 -1 O VAL A 391 N ALA A 131 SHEET 3 AA3 3 ALA A 369 LEU A 370 -1 N ALA A 369 O ARG A 392 SHEET 1 AA4 2 MET A 292 GLU A 293 0 SHEET 2 AA4 2 ALA A 298 ILE A 299 -1 O ILE A 299 N MET A 292 LINK SG CYS A 344 FE HEM A 402 1555 1555 2.24 CISPEP 1 PRO A 38 PRO A 39 0 -3.45 CISPEP 2 PRO A 88 PRO A 89 0 6.53 SITE 1 AC1 8 LYS A 194 ARG A 195 THR A 197 PRO A 199 SITE 2 AC1 8 ALA A 200 GLY A 205 ARG A 209 HOH A 531 SITE 1 AC2 24 LEU A 83 LEU A 84 HIS A 91 ARG A 95 SITE 2 AC2 24 PHE A 102 LEU A 230 ALA A 233 THR A 237 SITE 3 AC2 24 THR A 238 LEU A 241 ALA A 283 THR A 284 SITE 4 AC2 24 ARG A 286 LEU A 309 ALA A 336 PHE A 337 SITE 5 AC2 24 GLY A 338 HIS A 342 CYS A 344 LEU A 345 SITE 6 AC2 24 GLY A 346 ALA A 350 HOH A 523 HOH A 560 CRYST1 110.184 50.585 74.638 90.00 98.91 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009076 0.000000 0.001423 0.00000 SCALE2 0.000000 0.019769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013562 0.00000