HEADER TRANSFERASE 17-JUL-15 5CNN TITLE CRYSTAL STRUCTURE OF THE EGFR KINASE DOMAIN MUTANT I682Q COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN (UNP RESIDUES 696-1042); COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS KINASE EGFR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.KOVACS,R.DAS,A.MIRZA,N.JURA,T.BARROS,J.KURIYAN REVDAT 5 27-SEP-23 5CNN 1 LINK REVDAT 4 04-DEC-19 5CNN 1 REMARK REVDAT 3 06-SEP-17 5CNN 1 JRNL REMARK REVDAT 2 12-AUG-15 5CNN 1 JRNL REVDAT 1 29-JUL-15 5CNN 0 JRNL AUTH E.KOVACS,R.DAS,Q.WANG,T.S.COLLIER,A.CANTOR,Y.HUANG,K.WONG, JRNL AUTH 2 A.MIRZA,T.BARROS,P.GROB,N.JURA,R.BOSE,J.KURIYAN JRNL TITL ANALYSIS OF THE ROLE OF THE C-TERMINAL TAIL IN THE JRNL TITL 2 REGULATION OF THE EPIDERMAL GROWTH FACTOR RECEPTOR. JRNL REF MOL.CELL.BIOL. V. 35 3083 2015 JRNL REFN ESSN 1098-5549 JRNL PMID 26124280 JRNL DOI 10.1128/MCB.00248-15 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1839 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 61611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.5223 - 5.3206 0.99 2758 133 0.1687 0.1747 REMARK 3 2 5.3206 - 4.2244 1.00 2692 138 0.1520 0.1778 REMARK 3 3 4.2244 - 3.6907 1.00 2675 145 0.1520 0.1707 REMARK 3 4 3.6907 - 3.3534 1.00 2671 157 0.1672 0.1837 REMARK 3 5 3.3534 - 3.1131 1.00 2664 142 0.1811 0.2434 REMARK 3 6 3.1131 - 2.9296 1.00 2621 167 0.1848 0.2149 REMARK 3 7 2.9296 - 2.7830 1.00 2682 134 0.1792 0.1918 REMARK 3 8 2.7830 - 2.6618 1.00 2649 147 0.1818 0.1918 REMARK 3 9 2.6618 - 2.5594 1.00 2627 148 0.1834 0.2264 REMARK 3 10 2.5594 - 2.4711 1.00 2666 157 0.1940 0.2206 REMARK 3 11 2.4711 - 2.3938 1.00 2632 142 0.1914 0.2649 REMARK 3 12 2.3938 - 2.3254 1.00 2637 143 0.1944 0.2287 REMARK 3 13 2.3254 - 2.2642 1.00 2641 145 0.1888 0.2153 REMARK 3 14 2.2642 - 2.2089 1.00 2653 145 0.1914 0.2365 REMARK 3 15 2.2089 - 2.1587 1.00 2689 136 0.1905 0.2306 REMARK 3 16 2.1587 - 2.1128 1.00 2648 138 0.2019 0.2436 REMARK 3 17 2.1128 - 2.0705 1.00 2636 137 0.2093 0.2694 REMARK 3 18 2.0705 - 2.0314 1.00 2623 145 0.2186 0.2703 REMARK 3 19 2.0314 - 1.9952 1.00 2644 128 0.2305 0.2503 REMARK 3 20 1.9952 - 1.9614 1.00 2668 119 0.2432 0.3017 REMARK 3 21 1.9614 - 1.9297 1.00 2663 142 0.2475 0.2728 REMARK 3 22 1.9297 - 1.9000 1.00 2651 133 0.2721 0.2927 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5034 REMARK 3 ANGLE : 1.020 6826 REMARK 3 CHIRALITY : 0.041 767 REMARK 3 PLANARITY : 0.005 850 REMARK 3 DIHEDRAL : 14.056 1915 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CNN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211909. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61664 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 42.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3GT8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, MORPHOLINEETHANESULFONIC REMARK 280 ACID, AMMONIUM CHLORIDE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 77.94350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.02250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 77.94350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.02250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 669 REMARK 465 ALA A 670 REMARK 465 MET A 671 REMARK 465 GLY A 672 REMARK 465 GLU A 673 REMARK 465 ALA A 674 REMARK 465 THR A 727 REMARK 465 SER A 728 REMARK 465 PRO A 729 REMARK 465 LEU A 838 REMARK 465 GLY A 839 REMARK 465 ALA A 840 REMARK 465 GLU A 841 REMARK 465 GLU A 842 REMARK 465 LYS A 843 REMARK 465 GLU A 844 REMARK 465 TYR A 845 REMARK 465 HIS A 846 REMARK 465 ALA A 847 REMARK 465 GLU A 848 REMARK 465 GLY A 849 REMARK 465 GLY A 850 REMARK 465 GLU A 991 REMARK 465 TYR A 992 REMARK 465 LEU A 993 REMARK 465 ILE A 994 REMARK 465 PRO A 995 REMARK 465 GLN A 996 REMARK 465 GLN A 997 REMARK 465 GLY A 998 REMARK 465 PHE A 999 REMARK 465 PHE A 1000 REMARK 465 SER A 1001 REMARK 465 SER A 1002 REMARK 465 PRO A 1003 REMARK 465 SER A 1004 REMARK 465 THR A 1005 REMARK 465 SER A 1006 REMARK 465 ARG A 1007 REMARK 465 THR A 1008 REMARK 465 PRO A 1009 REMARK 465 LEU A 1010 REMARK 465 LEU A 1011 REMARK 465 SER A 1012 REMARK 465 SER A 1013 REMARK 465 LEU A 1014 REMARK 465 SER A 1015 REMARK 465 ALA A 1016 REMARK 465 THR A 1017 REMARK 465 SER A 1018 REMARK 465 GLY B 669 REMARK 465 ALA B 670 REMARK 465 MET B 671 REMARK 465 GLY B 672 REMARK 465 GLU B 673 REMARK 465 ALA B 674 REMARK 465 PRO B 675 REMARK 465 ALA B 840 REMARK 465 GLU B 841 REMARK 465 GLU B 842 REMARK 465 LYS B 843 REMARK 465 GLU B 844 REMARK 465 TYR B 845 REMARK 465 HIS B 846 REMARK 465 ALA B 847 REMARK 465 GLU B 848 REMARK 465 GLY B 849 REMARK 465 GLY B 850 REMARK 465 GLU B 991 REMARK 465 TYR B 992 REMARK 465 LEU B 993 REMARK 465 ILE B 994 REMARK 465 PRO B 995 REMARK 465 GLN B 996 REMARK 465 GLN B 997 REMARK 465 GLY B 998 REMARK 465 PHE B 999 REMARK 465 PHE B 1000 REMARK 465 SER B 1001 REMARK 465 SER B 1002 REMARK 465 PRO B 1003 REMARK 465 SER B 1004 REMARK 465 THR B 1005 REMARK 465 SER B 1006 REMARK 465 ARG B 1007 REMARK 465 THR B 1008 REMARK 465 PRO B 1009 REMARK 465 LEU B 1010 REMARK 465 LEU B 1011 REMARK 465 SER B 1012 REMARK 465 SER B 1013 REMARK 465 LEU B 1014 REMARK 465 SER B 1015 REMARK 465 ALA B 1016 REMARK 465 THR B 1017 REMARK 465 SER B 1018 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3G ANP A 1101 O HOH A 1201 2.06 REMARK 500 OD1 ASP A 776 O HOH A 1202 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 759 -129.48 -137.99 REMARK 500 ARG A 812 -9.55 74.61 REMARK 500 ASP A 813 39.38 -143.96 REMARK 500 ASP A 979 73.57 -154.49 REMARK 500 LYS B 730 -62.24 99.22 REMARK 500 THR B 759 -123.16 -128.31 REMARK 500 LYS B 782 -32.91 -38.28 REMARK 500 ARG B 812 -11.48 77.81 REMARK 500 ASP B 813 42.94 -142.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 818 OD1 REMARK 620 2 ASP A 831 OD2 95.6 REMARK 620 3 ANP A1101 O2B 87.5 174.9 REMARK 620 4 ANP A1101 O1A 176.9 86.7 90.3 REMARK 620 5 HOH A1201 O 89.4 72.9 103.1 93.3 REMARK 620 6 HOH A1272 O 84.8 93.3 91.0 93.0 164.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 818 OD1 REMARK 620 2 ASP B 831 OD2 85.7 REMARK 620 3 ANP B1101 O3G 90.1 94.1 REMARK 620 4 ANP B1101 O2B 91.5 177.1 85.3 REMARK 620 5 ANP B1101 O1A 174.3 90.6 94.4 92.2 REMARK 620 6 HOH B1259 O 83.3 84.9 173.4 95.3 92.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP B 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 1102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CNO RELATED DB: PDB DBREF 5CNN A 672 1018 UNP P00533 EGFR_HUMAN 696 1042 DBREF 5CNN B 672 1018 UNP P00533 EGFR_HUMAN 696 1042 SEQADV 5CNN GLY A 669 UNP P00533 EXPRESSION TAG SEQADV 5CNN ALA A 670 UNP P00533 EXPRESSION TAG SEQADV 5CNN MET A 671 UNP P00533 EXPRESSION TAG SEQADV 5CNN GLN A 682 UNP P00533 ILE 706 ENGINEERED MUTATION SEQADV 5CNN GLY B 669 UNP P00533 EXPRESSION TAG SEQADV 5CNN ALA B 670 UNP P00533 EXPRESSION TAG SEQADV 5CNN MET B 671 UNP P00533 EXPRESSION TAG SEQADV 5CNN GLN B 682 UNP P00533 ILE 706 ENGINEERED MUTATION SEQRES 1 A 350 GLY ALA MET GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG SEQRES 2 A 350 GLN LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU SEQRES 3 A 350 GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP SEQRES 4 A 350 ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE SEQRES 5 A 350 LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS SEQRES 6 A 350 GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP SEQRES 7 A 350 ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SEQRES 8 A 350 SER THR VAL GLN LEU ILE THR GLN LEU MET PRO PHE GLY SEQRES 9 A 350 CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE SEQRES 10 A 350 GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA SEQRES 11 A 350 LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS SEQRES 12 A 350 ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO SEQRES 13 A 350 GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS LEU SEQRES 14 A 350 LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY SEQRES 15 A 350 LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU SEQRES 16 A 350 HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR SEQRES 17 A 350 GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER LYS SEQRES 18 A 350 PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE SEQRES 19 A 350 LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS SEQRES 20 A 350 THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET SEQRES 21 A 350 ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE SEQRES 22 A 350 ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR SEQRES 23 A 350 LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER SEQRES 24 A 350 PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU SEQRES 25 A 350 GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU SEQRES 26 A 350 ILE PRO GLN GLN GLY PHE PHE SER SER PRO SER THR SER SEQRES 27 A 350 ARG THR PRO LEU LEU SER SER LEU SER ALA THR SER SEQRES 1 B 350 GLY ALA MET GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG SEQRES 2 B 350 GLN LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU SEQRES 3 B 350 GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP SEQRES 4 B 350 ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE SEQRES 5 B 350 LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS SEQRES 6 B 350 GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP SEQRES 7 B 350 ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SEQRES 8 B 350 SER THR VAL GLN LEU ILE THR GLN LEU MET PRO PHE GLY SEQRES 9 B 350 CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE SEQRES 10 B 350 GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA SEQRES 11 B 350 LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS SEQRES 12 B 350 ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO SEQRES 13 B 350 GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS LEU SEQRES 14 B 350 LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY SEQRES 15 B 350 LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU SEQRES 16 B 350 HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR SEQRES 17 B 350 GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER LYS SEQRES 18 B 350 PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE SEQRES 19 B 350 LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS SEQRES 20 B 350 THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET SEQRES 21 B 350 ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE SEQRES 22 B 350 ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR SEQRES 23 B 350 LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER SEQRES 24 B 350 PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU SEQRES 25 B 350 GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU SEQRES 26 B 350 ILE PRO GLN GLN GLY PHE PHE SER SER PRO SER THR SER SEQRES 27 B 350 ARG THR PRO LEU LEU SER SER LEU SER ALA THR SER HET ANP A1101 31 HET MG A1102 1 HET ANP B1101 31 HET MG B1102 1 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 3 ANP 2(C10 H17 N6 O12 P3) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *273(H2 O) HELIX 1 AA1 ASN A 676 LEU A 680 5 5 HELIX 2 AA2 LYS A 684 THR A 686 5 3 HELIX 3 AA3 ALA A 731 SER A 744 1 14 HELIX 4 AA4 CYS A 773 HIS A 781 1 9 HELIX 5 AA5 GLY A 786 ARG A 807 1 22 HELIX 6 AA6 ALA A 815 ARG A 817 5 3 HELIX 7 AA7 PRO A 853 MET A 857 5 5 HELIX 8 AA8 ALA A 858 ARG A 865 1 8 HELIX 9 AA9 THR A 868 THR A 885 1 18 HELIX 10 AB1 PRO A 895 SER A 897 5 3 HELIX 11 AB2 GLU A 898 LYS A 905 1 8 HELIX 12 AB3 THR A 916 TRP A 927 1 12 HELIX 13 AB4 ASP A 930 ARG A 934 5 5 HELIX 14 AB5 LYS A 936 ARG A 949 1 14 HELIX 15 AB6 ASP A 950 TYR A 954 5 5 HELIX 16 AB7 GLY A 959 MET A 963 5 5 HELIX 17 AB8 SER A 967 ASP A 979 1 13 HELIX 18 AB9 ASN B 676 LEU B 680 5 5 HELIX 19 AC1 LYS B 684 THR B 686 5 3 HELIX 20 AC2 LYS B 730 VAL B 745 1 16 HELIX 21 AC3 CYS B 773 HIS B 781 1 9 HELIX 22 AC4 GLY B 786 ARG B 807 1 22 HELIX 23 AC5 ALA B 815 ARG B 817 5 3 HELIX 24 AC6 GLY B 833 LEU B 838 1 6 HELIX 25 AC7 PRO B 853 MET B 857 5 5 HELIX 26 AC8 ALA B 858 ARG B 865 1 8 HELIX 27 AC9 THR B 868 THR B 885 1 18 HELIX 28 AD1 PRO B 895 SER B 897 5 3 HELIX 29 AD2 GLU B 898 LYS B 905 1 8 HELIX 30 AD3 THR B 916 TRP B 927 1 12 HELIX 31 AD4 ASP B 930 ARG B 934 5 5 HELIX 32 AD5 LYS B 936 ARG B 949 1 14 HELIX 33 AD6 ASP B 950 TYR B 954 5 5 HELIX 34 AD7 GLY B 959 MET B 963 5 5 HELIX 35 AD8 SER B 967 ASP B 979 1 13 SHEET 1 AA1 6 ARG A 681 GLN A 682 0 SHEET 2 AA1 6 GLY A 755 LEU A 758 1 O ILE A 756 N ARG A 681 SHEET 3 AA1 6 VAL A 762 THR A 766 -1 O ILE A 765 N GLY A 755 SHEET 4 AA1 6 ILE A 716 LEU A 723 -1 N ALA A 719 O THR A 766 SHEET 5 AA1 6 GLY A 700 TRP A 707 -1 N TYR A 703 O ILE A 720 SHEET 6 AA1 6 PHE A 688 SER A 696 -1 N LEU A 694 O VAL A 702 SHEET 1 AA2 2 VAL A 819 THR A 823 0 SHEET 2 AA2 2 HIS A 826 ILE A 829 -1 O LYS A 828 N LEU A 820 SHEET 1 AA3 6 ARG B 681 GLN B 682 0 SHEET 2 AA3 6 GLY B 755 LEU B 758 1 O ILE B 756 N ARG B 681 SHEET 3 AA3 6 VAL B 762 THR B 766 -1 O ILE B 765 N GLY B 755 SHEET 4 AA3 6 ILE B 716 LEU B 723 -1 N ALA B 719 O THR B 766 SHEET 5 AA3 6 GLY B 700 TRP B 707 -1 N TYR B 703 O ILE B 720 SHEET 6 AA3 6 PHE B 688 SER B 696 -1 N LYS B 692 O LYS B 704 SHEET 1 AA4 2 VAL B 819 THR B 823 0 SHEET 2 AA4 2 HIS B 826 ILE B 829 -1 O LYS B 828 N LEU B 820 LINK OD1 ASN A 818 MG MG A1102 1555 1555 2.08 LINK OD2 ASP A 831 MG MG A1102 1555 1555 2.09 LINK O2B ANP A1101 MG MG A1102 1555 1555 1.85 LINK O1A ANP A1101 MG MG A1102 1555 1555 1.89 LINK MG MG A1102 O HOH A1201 1555 1555 1.98 LINK MG MG A1102 O HOH A1272 1555 1555 2.15 LINK OD1 ASN B 818 MG MG B1102 1555 1555 2.11 LINK OD2 ASP B 831 MG MG B1102 1555 1555 2.05 LINK O3G ANP B1101 MG MG B1102 1555 1555 1.91 LINK O2B ANP B1101 MG MG B1102 1555 1555 2.01 LINK O1A ANP B1101 MG MG B1102 1555 1555 1.98 LINK MG MG B1102 O HOH B1259 1555 1555 2.05 SITE 1 AC1 26 GLY A 695 SER A 696 GLY A 697 ALA A 698 SITE 2 AC1 26 GLY A 700 VAL A 702 ALA A 719 LYS A 721 SITE 3 AC1 26 THR A 766 GLN A 767 MET A 769 CYS A 773 SITE 4 AC1 26 ASP A 813 ARG A 817 ASN A 818 LEU A 820 SITE 5 AC1 26 ASP A 831 MG A1102 HOH A1201 HOH A1222 SITE 6 AC1 26 HOH A1253 HOH A1256 HOH A1272 HOH A1274 SITE 7 AC1 26 HOH A1284 HOH A1298 SITE 1 AC2 5 ASN A 818 ASP A 831 ANP A1101 HOH A1201 SITE 2 AC2 5 HOH A1272 SITE 1 AC3 26 GLY B 695 SER B 696 GLY B 697 ALA B 698 SITE 2 AC3 26 PHE B 699 GLY B 700 VAL B 702 ALA B 719 SITE 3 AC3 26 LYS B 721 GLN B 767 MET B 769 CYS B 773 SITE 4 AC3 26 ASP B 813 ARG B 817 ASN B 818 LEU B 820 SITE 5 AC3 26 ASP B 831 MG B1102 HOH B1206 HOH B1241 SITE 6 AC3 26 HOH B1259 HOH B1262 HOH B1263 HOH B1268 SITE 7 AC3 26 HOH B1273 HOH B1286 SITE 1 AC4 4 ASN B 818 ASP B 831 ANP B1101 HOH B1259 CRYST1 155.887 72.045 76.774 90.00 113.32 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006415 0.000000 0.002766 0.00000 SCALE2 0.000000 0.013880 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014184 0.00000