data_5CNR
# 
_entry.id   5CNR 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.379 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   5CNR         pdb_00005cnr 10.2210/pdb5cnr/pdb 
WWPDB D_1000211914 ?            ?                   
# 
_pdbx_database_related.db_name        PDB 
_pdbx_database_related.details        . 
_pdbx_database_related.db_id          4P97 
_pdbx_database_related.content_type   unspecified 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.entry_id                        5CNR 
_pdbx_database_status.recvd_initial_deposition_date   2015-07-18 
_pdbx_database_status.SG_entry                        N 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Boerneke, M.' 1 
'Dibrov, S.'   2 
'Hermann, T.'  3 
# 
_citation.abstract                  ? 
_citation.abstract_id_CAS           ? 
_citation.book_id_ISBN              ? 
_citation.book_publisher            ? 
_citation.book_publisher_city       ? 
_citation.book_title                ? 
_citation.coordinate_linkage        ? 
_citation.country                   GE 
_citation.database_id_Medline       ? 
_citation.details                   ? 
_citation.id                        primary 
_citation.journal_abbrev            Angew.Chem.Int.Ed.Engl. 
_citation.journal_id_ASTM           ACIEAY 
_citation.journal_id_CSD            0179 
_citation.journal_id_ISSN           1521-3773 
_citation.journal_full              ? 
_citation.journal_issue             ? 
_citation.journal_volume            55 
_citation.language                  ? 
_citation.page_first                4097 
_citation.page_last                 4100 
_citation.title                     'Crystal-Structure-Guided Design of Self-Assembling RNA Nanotriangles.' 
_citation.year                      2016 
_citation.database_id_CSD           ? 
_citation.pdbx_database_id_DOI      10.1002/anie.201600233 
_citation.pdbx_database_id_PubMed   26914842 
_citation.unpublished_flag          ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Boerneke, M.A.' 1 ? 
primary 'Dibrov, S.M.'   2 ? 
primary 'Hermann, T.'    3 ? 
# 
_cell.angle_alpha                  90.00 
_cell.angle_alpha_esd              ? 
_cell.angle_beta                   90.00 
_cell.angle_beta_esd               ? 
_cell.angle_gamma                  120.00 
_cell.angle_gamma_esd              ? 
_cell.entry_id                     5CNR 
_cell.details                      ? 
_cell.formula_units_Z              ? 
_cell.length_a                     59.934 
_cell.length_a_esd                 ? 
_cell.length_b                     59.934 
_cell.length_b_esd                 ? 
_cell.length_c                     262.622 
_cell.length_c_esd                 ? 
_cell.volume                       ? 
_cell.volume_esd                   ? 
_cell.Z_PDB                        36 
_cell.reciprocal_angle_alpha       ? 
_cell.reciprocal_angle_beta        ? 
_cell.reciprocal_angle_gamma       ? 
_cell.reciprocal_angle_alpha_esd   ? 
_cell.reciprocal_angle_beta_esd    ? 
_cell.reciprocal_angle_gamma_esd   ? 
_cell.reciprocal_length_a          ? 
_cell.reciprocal_length_b          ? 
_cell.reciprocal_length_c          ? 
_cell.reciprocal_length_a_esd      ? 
_cell.reciprocal_length_b_esd      ? 
_cell.reciprocal_length_c_esd      ? 
_cell.pdbx_unique_axis             ? 
# 
_symmetry.entry_id                         5CNR 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                155 
_symmetry.space_group_name_Hall            ? 
_symmetry.space_group_name_H-M             'H 3 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;RNA (5'-R(*GP*UP*CP*UP*AP*CP*CP*CP*AP*CP*CP*UP*CP*GP*CP*C)-3')
;
4968.999 2 ? ? ? ? 
2 polymer     syn 
;RNA (5'-R(*AP*GP*AP*GP*GP*AP*CP*GP*GP*CP*G)-3')
;
3624.258 2 ? ? ? ? 
3 non-polymer syn 'CHLORIDE ION'                                                   35.453   1 ? ? ? ? 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polyribonucleotide no no GUCUACCCACCUCGCC GUCUACCCACCUCGCC A,E ? 
2 polyribonucleotide no no AGAGGACGGCG      AGAGGACGGCG      B,F ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  G n 
1 2  U n 
1 3  C n 
1 4  U n 
1 5  A n 
1 6  C n 
1 7  C n 
1 8  C n 
1 9  A n 
1 10 C n 
1 11 C n 
1 12 U n 
1 13 C n 
1 14 G n 
1 15 C n 
1 16 C n 
2 1  A n 
2 2  G n 
2 3  A n 
2 4  G n 
2 5  G n 
2 6  A n 
2 7  C n 
2 8  G n 
2 9  G n 
2 10 C n 
2 11 G n 
# 
loop_
_pdbx_entity_src_syn.entity_id 
_pdbx_entity_src_syn.pdbx_src_id 
_pdbx_entity_src_syn.pdbx_alt_source_flag 
_pdbx_entity_src_syn.pdbx_beg_seq_num 
_pdbx_entity_src_syn.pdbx_end_seq_num 
_pdbx_entity_src_syn.organism_scientific 
_pdbx_entity_src_syn.organism_common_name 
_pdbx_entity_src_syn.ncbi_taxonomy_id 
_pdbx_entity_src_syn.details 
1 1 sample 1 16 'Seneca valley virus' ? 390157 ? 
2 1 sample 1 11 'Seneca valley virus' ? 390157 ? 
# 
loop_
_struct_ref.db_code 
_struct_ref.db_name 
_struct_ref.details 
_struct_ref.entity_id 
_struct_ref.id 
_struct_ref.seq_align 
_struct_ref.seq_dif 
_struct_ref.pdbx_db_accession 
_struct_ref.pdbx_db_isoform 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
_struct_ref.pdbx_align_end 
5CNR PDB ? 1 1 ? ? 5CNR ? ? 1 ? 
5CNR PDB ? 2 2 ? ? 5CNR ? ? 1 ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 5CNR A 1 ? 16 ? 5CNR 3  ? 18 ? 3  18 
2 2 5CNR B 1 ? 11 ? 5CNR 37 ? 47 ? 37 47 
3 1 5CNR E 1 ? 16 ? 5CNR 3  ? 18 ? 3  18 
4 2 5CNR F 1 ? 11 ? 5CNR 37 ? 47 ? 37 47 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
A  'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
C  'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O8 P'  323.197 
CL non-polymer   . 'CHLORIDE ION'               ? 'Cl -1'           35.453  
G  'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 
U  'RNA linking' y "URIDINE-5'-MONOPHOSPHATE"   ? 'C9 H13 N2 O9 P'  324.181 
# 
_exptl.absorpt_coefficient_mu     ? 
_exptl.absorpt_correction_T_max   ? 
_exptl.absorpt_correction_T_min   ? 
_exptl.absorpt_correction_type    ? 
_exptl.absorpt_process_details    ? 
_exptl.entry_id                   5CNR 
_exptl.crystals_number            ? 
_exptl.details                    ? 
_exptl.method                     'X-RAY DIFFRACTION' 
_exptl.method_details             ? 
# 
_exptl_crystal.colour                      ? 
_exptl_crystal.density_diffrn              ? 
_exptl_crystal.density_Matthews            2.64 
_exptl_crystal.density_method              ? 
_exptl_crystal.density_percent_sol         53.42 
_exptl_crystal.description                 ? 
_exptl_crystal.F_000                       ? 
_exptl_crystal.id                          1 
_exptl_crystal.preparation                 ? 
_exptl_crystal.size_max                    ? 
_exptl_crystal.size_mid                    ? 
_exptl_crystal.size_min                    ? 
_exptl_crystal.size_rad                    ? 
_exptl_crystal.colour_lustre               ? 
_exptl_crystal.colour_modifier             ? 
_exptl_crystal.colour_primary              ? 
_exptl_crystal.density_meas                ? 
_exptl_crystal.density_meas_esd            ? 
_exptl_crystal.density_meas_gt             ? 
_exptl_crystal.density_meas_lt             ? 
_exptl_crystal.density_meas_temp           ? 
_exptl_crystal.density_meas_temp_esd       ? 
_exptl_crystal.density_meas_temp_gt        ? 
_exptl_crystal.density_meas_temp_lt        ? 
_exptl_crystal.pdbx_crystal_image_url      ? 
_exptl_crystal.pdbx_crystal_image_format   ? 
_exptl_crystal.pdbx_mosaicity              ? 
_exptl_crystal.pdbx_mosaicity_esd          ? 
# 
_exptl_crystal_grow.apparatus       ? 
_exptl_crystal_grow.atmosphere      ? 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.details         ? 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.method_ref      ? 
_exptl_crystal_grow.pH              7.5 
_exptl_crystal_grow.pressure        ? 
_exptl_crystal_grow.pressure_esd    ? 
_exptl_crystal_grow.seeding         ? 
_exptl_crystal_grow.seeding_ref     ? 
_exptl_crystal_grow.temp            281 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.temp_esd        ? 
_exptl_crystal_grow.time            ? 
_exptl_crystal_grow.pdbx_details    
;drop: 20% MPD, 55 mM NaCl, 12 mM spermine, 40 mM Tris
well: 18% MPD, 120 mM NaCl
;
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
_diffrn.ambient_environment    ? 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.ambient_temp_esd       ? 
_diffrn.crystal_id             1 
_diffrn.crystal_support        ? 
_diffrn.crystal_treatment      ? 
_diffrn.details                ? 
_diffrn.id                     1 
_diffrn.ambient_pressure       ? 
_diffrn.ambient_pressure_esd   ? 
_diffrn.ambient_pressure_gt    ? 
_diffrn.ambient_pressure_lt    ? 
_diffrn.ambient_temp_gt        ? 
_diffrn.ambient_temp_lt        ? 
# 
_diffrn_detector.details                      ? 
_diffrn_detector.detector                     'IMAGE PLATE' 
_diffrn_detector.diffrn_id                    1 
_diffrn_detector.type                         'MAR scanner 345 mm plate' 
_diffrn_detector.area_resol_mean              ? 
_diffrn_detector.dtime                        ? 
_diffrn_detector.pdbx_frames_total            ? 
_diffrn_detector.pdbx_collection_time_total   ? 
_diffrn_detector.pdbx_collection_date         2015-01-13 
# 
_diffrn_radiation.collimation                      ? 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.filter_edge                      ? 
_diffrn_radiation.inhomogeneity                    ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.polarisn_norm                    ? 
_diffrn_radiation.polarisn_ratio                   ? 
_diffrn_radiation.probe                            ? 
_diffrn_radiation.type                             ? 
_diffrn_radiation.xray_symbol                      ? 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.pdbx_wavelength_list             ? 
_diffrn_radiation.pdbx_wavelength                  ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_analyzer                    ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.54 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.current                     ? 
_diffrn_source.details                     ? 
_diffrn_source.diffrn_id                   1 
_diffrn_source.power                       ? 
_diffrn_source.size                        ? 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.target                      ? 
_diffrn_source.type                        'RIGAKU FR-D' 
_diffrn_source.voltage                     ? 
_diffrn_source.take-off_angle              ? 
_diffrn_source.pdbx_wavelength_list        1.54 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_synchrotron_site       ? 
# 
_reflns.B_iso_Wilson_estimate            ? 
_reflns.entry_id                         5CNR 
_reflns.data_reduction_details           ? 
_reflns.data_reduction_method            ? 
_reflns.d_resolution_high                2.59 
_reflns.d_resolution_low                 48.3 
_reflns.details                          ? 
_reflns.limit_h_max                      ? 
_reflns.limit_h_min                      ? 
_reflns.limit_k_max                      ? 
_reflns.limit_k_min                      ? 
_reflns.limit_l_max                      ? 
_reflns.limit_l_min                      ? 
_reflns.number_all                       ? 
_reflns.number_obs                       5011 
_reflns.observed_criterion               ? 
_reflns.observed_criterion_F_max         ? 
_reflns.observed_criterion_F_min         ? 
_reflns.observed_criterion_I_max         ? 
_reflns.observed_criterion_I_min         ? 
_reflns.observed_criterion_sigma_F       ? 
_reflns.observed_criterion_sigma_I       ? 
_reflns.percent_possible_obs             83.2 
_reflns.R_free_details                   ? 
_reflns.Rmerge_F_all                     ? 
_reflns.Rmerge_F_obs                     ? 
_reflns.Friedel_coverage                 ? 
_reflns.number_gt                        ? 
_reflns.threshold_expression             ? 
_reflns.pdbx_redundancy                  17.6 
_reflns.pdbx_Rmerge_I_obs                ? 
_reflns.pdbx_Rmerge_I_all                ? 
_reflns.pdbx_Rsym_value                  0.076 
_reflns.pdbx_netI_over_av_sigmaI         ? 
_reflns.pdbx_netI_over_sigmaI            35.5 
_reflns.pdbx_res_netI_over_av_sigmaI_2   ? 
_reflns.pdbx_res_netI_over_sigmaI_2      ? 
_reflns.pdbx_chi_squared                 ? 
_reflns.pdbx_scaling_rejects             ? 
_reflns.pdbx_d_res_high_opt              ? 
_reflns.pdbx_d_res_low_opt               ? 
_reflns.pdbx_d_res_opt_method            ? 
_reflns.phase_calculation_details        ? 
_reflns.pdbx_Rrim_I_all                  ? 
_reflns.pdbx_Rpim_I_all                  ? 
_reflns.pdbx_d_opt                       ? 
_reflns.pdbx_number_measured_all         ? 
_reflns.pdbx_diffrn_id                   1 
_reflns.pdbx_ordinal                     1 
_reflns.pdbx_CC_half                     ? 
_reflns.pdbx_R_split                     ? 
# 
_reflns_shell.d_res_high                  2.59 
_reflns_shell.d_res_low                   2.68 
_reflns_shell.meanI_over_sigI_all         ? 
_reflns_shell.meanI_over_sigI_obs         ? 
_reflns_shell.number_measured_all         ? 
_reflns_shell.number_measured_obs         ? 
_reflns_shell.number_possible             ? 
_reflns_shell.number_unique_all           ? 
_reflns_shell.number_unique_obs           ? 
_reflns_shell.percent_possible_all        11.7 
_reflns_shell.percent_possible_obs        ? 
_reflns_shell.Rmerge_F_all                ? 
_reflns_shell.Rmerge_F_obs                ? 
_reflns_shell.Rmerge_I_all                ? 
_reflns_shell.Rmerge_I_obs                ? 
_reflns_shell.meanI_over_sigI_gt          ? 
_reflns_shell.meanI_over_uI_all           ? 
_reflns_shell.meanI_over_uI_gt            ? 
_reflns_shell.number_measured_gt          ? 
_reflns_shell.number_unique_gt            ? 
_reflns_shell.percent_possible_gt         ? 
_reflns_shell.Rmerge_F_gt                 ? 
_reflns_shell.Rmerge_I_gt                 ? 
_reflns_shell.pdbx_redundancy             2.0 
_reflns_shell.pdbx_Rsym_value             ? 
_reflns_shell.pdbx_chi_squared            ? 
_reflns_shell.pdbx_netI_over_sigmaI_all   ? 
_reflns_shell.pdbx_netI_over_sigmaI_obs   ? 
_reflns_shell.pdbx_Rrim_I_all             ? 
_reflns_shell.pdbx_Rpim_I_all             ? 
_reflns_shell.pdbx_rejects                ? 
_reflns_shell.pdbx_ordinal                1 
_reflns_shell.pdbx_diffrn_id              1 
_reflns_shell.pdbx_CC_half                ? 
_reflns_shell.pdbx_R_split                ? 
# 
_refine.aniso_B[1][1]                            -21.4768 
_refine.aniso_B[1][2]                            0.0000 
_refine.aniso_B[1][3]                            -0.0000 
_refine.aniso_B[2][2]                            -21.4768 
_refine.aniso_B[2][3]                            0.0000 
_refine.aniso_B[3][3]                            -52.3477 
_refine.B_iso_max                                ? 
_refine.B_iso_mean                               ? 
_refine.B_iso_min                                ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.details                                  ? 
_refine.diff_density_max                         ? 
_refine.diff_density_max_esd                     ? 
_refine.diff_density_min                         ? 
_refine.diff_density_min_esd                     ? 
_refine.diff_density_rms                         ? 
_refine.diff_density_rms_esd                     ? 
_refine.entry_id                                 5CNR 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.ls_abs_structure_details                 ? 
_refine.ls_abs_structure_Flack                   ? 
_refine.ls_abs_structure_Flack_esd               ? 
_refine.ls_abs_structure_Rogers                  ? 
_refine.ls_abs_structure_Rogers_esd              ? 
_refine.ls_d_res_high                            2.59 
_refine.ls_d_res_low                             19.403 
_refine.ls_extinction_coef                       ? 
_refine.ls_extinction_coef_esd                   ? 
_refine.ls_extinction_expression                 ? 
_refine.ls_extinction_method                     ? 
_refine.ls_goodness_of_fit_all                   ? 
_refine.ls_goodness_of_fit_all_esd               ? 
_refine.ls_goodness_of_fit_obs                   ? 
_refine.ls_goodness_of_fit_obs_esd               ? 
_refine.ls_hydrogen_treatment                    ? 
_refine.ls_matrix_type                           ? 
_refine.ls_number_constraints                    ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_reflns_all                     ? 
_refine.ls_number_reflns_obs                     4985 
_refine.ls_number_reflns_R_free                  500 
_refine.ls_number_reflns_R_work                  ? 
_refine.ls_number_restraints                     ? 
_refine.ls_percent_reflns_obs                    83.82 
_refine.ls_percent_reflns_R_free                 10.03 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_obs                          0.1979 
_refine.ls_R_factor_R_free                       0.2444 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_R_factor_R_work                       0.1925 
_refine.ls_R_Fsqd_factor_obs                     ? 
_refine.ls_R_I_factor_obs                        ? 
_refine.ls_redundancy_reflns_all                 ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.ls_restrained_S_all                      ? 
_refine.ls_restrained_S_obs                      ? 
_refine.ls_shift_over_esd_max                    ? 
_refine.ls_shift_over_esd_mean                   ? 
_refine.ls_structure_factor_coef                 ? 
_refine.ls_weighting_details                     ? 
_refine.ls_weighting_scheme                      ? 
_refine.ls_wR_factor_all                         ? 
_refine.ls_wR_factor_obs                         ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.occupancy_max                            ? 
_refine.occupancy_min                            ? 
_refine.solvent_model_details                    'FLAT BULK SOLVENT MODEL' 
_refine.solvent_model_param_bsol                 91.673 
_refine.solvent_model_param_ksol                 0.298 
_refine.ls_R_factor_gt                           ? 
_refine.ls_goodness_of_fit_gt                    ? 
_refine.ls_goodness_of_fit_ref                   ? 
_refine.ls_shift_over_su_max                     ? 
_refine.ls_shift_over_su_max_lt                  ? 
_refine.ls_shift_over_su_mean                    ? 
_refine.ls_shift_over_su_mean_lt                 ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          1.35 
_refine.pdbx_ls_sigma_Fsqd                       ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_ls_cross_valid_method               'FREE R-VALUE' 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_starting_model                      4P97 
_refine.pdbx_stereochemistry_target_values       ML 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.pdbx_solvent_vdw_probe_radii             1.20 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             0.98 
_refine.pdbx_real_space_R                        ? 
_refine.pdbx_density_correlation                 ? 
_refine.pdbx_pd_number_of_powder_patterns        ? 
_refine.pdbx_pd_number_of_points                 ? 
_refine.pdbx_pd_meas_number_of_points            ? 
_refine.pdbx_pd_proc_ls_prof_R_factor            ? 
_refine.pdbx_pd_proc_ls_prof_wR_factor           ? 
_refine.pdbx_pd_Marquardt_correlation_coeff      ? 
_refine.pdbx_pd_Fsqrd_R_factor                   ? 
_refine.pdbx_pd_ls_matrix_band_width             ? 
_refine.pdbx_overall_phase_error                 33.86 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_diffrn_id                           1 
_refine.overall_SU_B                             ? 
_refine.overall_SU_ML                            0.35 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_average_fsc_overall                 ? 
_refine.pdbx_average_fsc_work                    ? 
_refine.pdbx_average_fsc_free                    ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   1136 
_refine_hist.pdbx_number_atoms_ligand         1 
_refine_hist.number_atoms_solvent             0 
_refine_hist.number_atoms_total               1137 
_refine_hist.d_res_high                       2.59 
_refine_hist.d_res_low                        19.403 
# 
loop_
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.criterion 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.number 
_refine_ls_restr.rejects 
_refine_ls_restr.type 
_refine_ls_restr.weight 
_refine_ls_restr.pdbx_restraint_function 
'X-RAY DIFFRACTION' ? 0.002  ? 1266 ? f_bond_d           ? ? 
'X-RAY DIFFRACTION' ? 0.445  ? 1966 ? f_angle_d          ? ? 
'X-RAY DIFFRACTION' ? 14.080 ? 632  ? f_dihedral_angle_d ? ? 
'X-RAY DIFFRACTION' ? 0.051  ? 266  ? f_chiral_restr     ? ? 
'X-RAY DIFFRACTION' ? 0.002  ? 54   ? f_plane_restr      ? ? 
# 
loop_
_refine_ls_shell.pdbx_refine_id 
_refine_ls_shell.d_res_high 
_refine_ls_shell.d_res_low 
_refine_ls_shell.number_reflns_all 
_refine_ls_shell.number_reflns_obs 
_refine_ls_shell.number_reflns_R_free 
_refine_ls_shell.number_reflns_R_work 
_refine_ls_shell.percent_reflns_obs 
_refine_ls_shell.percent_reflns_R_free 
_refine_ls_shell.R_factor_all 
_refine_ls_shell.R_factor_obs 
_refine_ls_shell.R_factor_R_free 
_refine_ls_shell.R_factor_R_free_error 
_refine_ls_shell.R_factor_R_work 
_refine_ls_shell.redundancy_reflns_all 
_refine_ls_shell.redundancy_reflns_obs 
_refine_ls_shell.wR_factor_all 
_refine_ls_shell.wR_factor_obs 
_refine_ls_shell.wR_factor_R_free 
_refine_ls_shell.wR_factor_R_work 
_refine_ls_shell.pdbx_total_number_of_bins_used 
_refine_ls_shell.pdbx_phase_error 
_refine_ls_shell.pdbx_fsc_work 
_refine_ls_shell.pdbx_fsc_free 
'X-RAY DIFFRACTION' 2.5963 2.8568  . . 53  474  36.00  . . . 0.4811 . 0.4279 . . . . . . . . . . 
'X-RAY DIFFRACTION' 2.8568 3.2685  . . 141 1271 98.00  . . . 0.4152 . 0.3209 . . . . . . . . . . 
'X-RAY DIFFRACTION' 3.2685 4.1116  . . 148 1338 100.00 . . . 0.2621 . 0.2473 . . . . . . . . . . 
'X-RAY DIFFRACTION' 4.1116 19.4032 . . 158 1402 100.00 . . . 0.1986 . 0.1418 . . . . . . . . . . 
# 
_struct.entry_id                     5CNR 
_struct.title                        'Crystal structure-guided design of self-assembling RNA nano triangles' 
_struct.pdbx_model_details           ? 
_struct.pdbx_formula_weight          ? 
_struct.pdbx_formula_weight_method   ? 
_struct.pdbx_model_type_details      ? 
_struct.pdbx_CASP_flag               ? 
# 
_struct_keywords.entry_id        5CNR 
_struct_keywords.text            'seneca valley virus, nanotriangle, self-assembly, RNA' 
_struct_keywords.pdbx_keywords   RNA 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 1 ? 
D N N 2 ? 
E N N 3 ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A G 1  N1 ? ? ? 1_555 B C 7 N3 ? ? A G 3  B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog2  hydrog ? ? A G 1  N2 ? ? ? 1_555 B C 7 O2 ? ? A G 3  B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog3  hydrog ? ? A G 1  O6 ? ? ? 1_555 B C 7 N4 ? ? A G 3  B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog4  hydrog ? ? A U 2  N3 ? ? ? 1_555 B A 6 N1 ? ? A U 4  B A 42 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog5  hydrog ? ? A U 2  O4 ? ? ? 1_555 B A 6 N6 ? ? A U 4  B A 42 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog6  hydrog ? ? A C 3  N3 ? ? ? 1_555 B G 5 N1 ? ? A C 5  B G 41 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog7  hydrog ? ? A C 3  N4 ? ? ? 1_555 B G 5 O6 ? ? A C 5  B G 41 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog8  hydrog ? ? A C 3  O2 ? ? ? 1_555 B G 5 N2 ? ? A C 5  B G 41 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog9  hydrog ? ? A U 4  N3 ? ? ? 1_555 B A 3 N7 ? ? A U 6  B A 39 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? 
hydrog10 hydrog ? ? A U 4  O2 ? ? ? 1_555 B A 3 N6 ? ? A U 6  B A 39 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? 
hydrog11 hydrog ? ? A C 10 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 12 B G 40 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog12 hydrog ? ? A C 10 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 12 B G 40 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog13 hydrog ? ? A C 10 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 12 B G 40 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog14 hydrog ? ? A C 11 N3 ? ? ? 1_555 B G 2 N1 ? ? A C 13 B G 38 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog15 hydrog ? ? A C 11 N4 ? ? ? 1_555 B G 2 O6 ? ? A C 13 B G 38 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog16 hydrog ? ? A C 11 O2 ? ? ? 1_555 B G 2 N2 ? ? A C 13 B G 38 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog17 hydrog ? ? A U 12 N3 ? ? ? 1_555 B A 1 N1 ? ? A U 14 B A 37 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog18 hydrog ? ? A U 12 O4 ? ? ? 1_555 B A 1 N6 ? ? A U 14 B A 37 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog19 hydrog ? ? C U 2  N3 ? ? ? 1_555 D A 6 N1 ? ? E U 4  F A 42 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog20 hydrog ? ? C U 2  O4 ? ? ? 1_555 D A 6 N6 ? ? E U 4  F A 42 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog21 hydrog ? ? C C 3  N4 ? ? ? 1_555 D G 5 O6 ? ? E C 5  F G 41 1_555 ? ? ? ? ? ? 'C-G PAIR'           ? ? ? 
hydrog22 hydrog ? ? C U 4  N3 ? ? ? 1_555 D A 3 N7 ? ? E U 6  F A 39 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? 
hydrog23 hydrog ? ? C U 4  O2 ? ? ? 1_555 D A 3 N6 ? ? E U 6  F A 39 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? 
hydrog24 hydrog ? ? C C 10 N4 ? ? ? 1_555 D G 4 O6 ? ? E C 12 F G 40 1_555 ? ? ? ? ? ? 'C-G PAIR'           ? ? ? 
hydrog25 hydrog ? ? C C 11 N4 ? ? ? 1_555 D G 2 O6 ? ? E C 13 F G 38 1_555 ? ? ? ? ? ? 'C-G PAIR'           ? ? ? 
hydrog26 hydrog ? ? C U 12 N3 ? ? ? 1_555 D A 1 N1 ? ? E U 14 F A 37 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog27 hydrog ? ? C U 12 O4 ? ? ? 1_555 D A 1 N6 ? ? E U 14 F A 37 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
_atom_sites.entry_id                    5CNR 
_atom_sites.fract_transf_matrix[1][1]   0.016685 
_atom_sites.fract_transf_matrix[1][2]   0.009633 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.019266 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.003808 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
CL 
N  
O  
P  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  G 1  3  3  G G A . n 
A 1 2  U 2  4  4  U U A . n 
A 1 3  C 3  5  5  C C A . n 
A 1 4  U 4  6  6  U U A . n 
A 1 5  A 5  7  7  A A A . n 
A 1 6  C 6  8  8  C C A . n 
A 1 7  C 7  9  9  C C A . n 
A 1 8  C 8  10 10 C C A . n 
A 1 9  A 9  11 11 A A A . n 
A 1 10 C 10 12 12 C C A . n 
A 1 11 C 11 13 13 C C A . n 
A 1 12 U 12 14 14 U U A . n 
A 1 13 C 13 15 15 C C A . n 
A 1 14 G 14 16 16 G G A . n 
A 1 15 C 15 17 17 C C A . n 
A 1 16 C 16 18 18 C C A . n 
B 2 1  A 1  37 37 A A B . n 
B 2 2  G 2  38 38 G G B . n 
B 2 3  A 3  39 39 A A B . n 
B 2 4  G 4  40 40 G G B . n 
B 2 5  G 5  41 41 G G B . n 
B 2 6  A 6  42 42 A A B . n 
B 2 7  C 7  43 43 C C B . n 
B 2 8  G 8  44 44 G G B . n 
B 2 9  G 9  45 45 G G B . n 
B 2 10 C 10 46 46 C C B . n 
B 2 11 G 11 47 47 G G B . n 
C 1 1  G 1  3  3  G G E . n 
C 1 2  U 2  4  4  U U E . n 
C 1 3  C 3  5  5  C C E . n 
C 1 4  U 4  6  6  U U E . n 
C 1 5  A 5  7  7  A A E . n 
C 1 6  C 6  8  8  C C E . n 
C 1 7  C 7  9  9  C C E . n 
C 1 8  C 8  10 10 C C E . n 
C 1 9  A 9  11 11 A A E . n 
C 1 10 C 10 12 12 C C E . n 
C 1 11 C 11 13 13 C C E . n 
C 1 12 U 12 14 14 U U E . n 
C 1 13 C 13 15 15 C C E . n 
C 1 14 G 14 16 16 G G E . n 
C 1 15 C 15 17 17 C C E . n 
C 1 16 C 16 18 18 C C E . n 
D 2 1  A 1  37 37 A A F . n 
D 2 2  G 2  38 38 G G F . n 
D 2 3  A 3  39 39 A A F . n 
D 2 4  G 4  40 40 G G F . n 
D 2 5  G 5  41 41 G G F . n 
D 2 6  A 6  42 42 A A F . n 
D 2 7  C 7  43 43 C C F . n 
D 2 8  G 8  44 44 G G F . n 
D 2 9  G 9  45 45 G G F . n 
D 2 10 C 10 46 46 C C F . n 
D 2 11 G 11 47 47 G G F . n 
# 
_pdbx_nonpoly_scheme.asym_id         E 
_pdbx_nonpoly_scheme.entity_id       3 
_pdbx_nonpoly_scheme.mon_id          CL 
_pdbx_nonpoly_scheme.ndb_seq_num     1 
_pdbx_nonpoly_scheme.pdb_seq_num     101 
_pdbx_nonpoly_scheme.auth_seq_num    1 
_pdbx_nonpoly_scheme.pdb_mon_id      CL 
_pdbx_nonpoly_scheme.auth_mon_id     CL 
_pdbx_nonpoly_scheme.pdb_strand_id   B 
_pdbx_nonpoly_scheme.pdb_ins_code    . 
# 
loop_
_pdbx_struct_assembly.id 
_pdbx_struct_assembly.details 
_pdbx_struct_assembly.method_details 
_pdbx_struct_assembly.oligomeric_details 
_pdbx_struct_assembly.oligomeric_count 
1 author_and_software_defined_assembly PISA dimeric 2 
2 author_and_software_defined_assembly PISA dimeric 2 
# 
loop_
_pdbx_struct_assembly_gen.assembly_id 
_pdbx_struct_assembly_gen.oper_expression 
_pdbx_struct_assembly_gen.asym_id_list 
1 1 A,B,E 
2 1 C,D   
# 
loop_
_pdbx_struct_assembly_prop.biol_id 
_pdbx_struct_assembly_prop.type 
_pdbx_struct_assembly_prop.value 
_pdbx_struct_assembly_prop.details 
1 'ABSA (A^2)' 1170 ? 
1 MORE         -8   ? 
1 'SSA (A^2)'  5340 ? 
2 'ABSA (A^2)' 960  ? 
2 MORE         0    ? 
2 'SSA (A^2)'  5460 ? 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2016-03-09 
2 'Structure model' 1 1 2016-03-23 
3 'Structure model' 1 2 2023-09-27 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Database references'    
2 3 'Structure model' 'Data collection'        
3 3 'Structure model' 'Database references'    
4 3 'Structure model' 'Derived calculations'   
5 3 'Structure model' 'Refinement description' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 3 'Structure model' chem_comp_atom                
2 3 'Structure model' chem_comp_bond                
3 3 'Structure model' citation                      
4 3 'Structure model' database_2                    
5 3 'Structure model' pdbx_initial_refinement_model 
6 3 'Structure model' pdbx_struct_oper_list         
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 3 'Structure model' '_citation.journal_id_CSD'                  
2 3 'Structure model' '_database_2.pdbx_DOI'                      
3 3 'Structure model' '_database_2.pdbx_database_accession'       
4 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 
# 
loop_
_pdbx_refine_tls.id 
_pdbx_refine_tls.pdbx_refine_id 
_pdbx_refine_tls.details 
_pdbx_refine_tls.method 
_pdbx_refine_tls.origin_x 
_pdbx_refine_tls.origin_y 
_pdbx_refine_tls.origin_z 
_pdbx_refine_tls.T[1][1] 
_pdbx_refine_tls.T[1][1]_esd 
_pdbx_refine_tls.T[1][2] 
_pdbx_refine_tls.T[1][2]_esd 
_pdbx_refine_tls.T[1][3] 
_pdbx_refine_tls.T[1][3]_esd 
_pdbx_refine_tls.T[2][2] 
_pdbx_refine_tls.T[2][2]_esd 
_pdbx_refine_tls.T[2][3] 
_pdbx_refine_tls.T[2][3]_esd 
_pdbx_refine_tls.T[3][3] 
_pdbx_refine_tls.T[3][3]_esd 
_pdbx_refine_tls.L[1][1] 
_pdbx_refine_tls.L[1][1]_esd 
_pdbx_refine_tls.L[1][2] 
_pdbx_refine_tls.L[1][2]_esd 
_pdbx_refine_tls.L[1][3] 
_pdbx_refine_tls.L[1][3]_esd 
_pdbx_refine_tls.L[2][2] 
_pdbx_refine_tls.L[2][2]_esd 
_pdbx_refine_tls.L[2][3] 
_pdbx_refine_tls.L[2][3]_esd 
_pdbx_refine_tls.L[3][3] 
_pdbx_refine_tls.L[3][3]_esd 
_pdbx_refine_tls.S[1][1] 
_pdbx_refine_tls.S[1][1]_esd 
_pdbx_refine_tls.S[1][2] 
_pdbx_refine_tls.S[1][2]_esd 
_pdbx_refine_tls.S[1][3] 
_pdbx_refine_tls.S[1][3]_esd 
_pdbx_refine_tls.S[2][1] 
_pdbx_refine_tls.S[2][1]_esd 
_pdbx_refine_tls.S[2][2] 
_pdbx_refine_tls.S[2][2]_esd 
_pdbx_refine_tls.S[2][3] 
_pdbx_refine_tls.S[2][3]_esd 
_pdbx_refine_tls.S[3][1] 
_pdbx_refine_tls.S[3][1]_esd 
_pdbx_refine_tls.S[3][2] 
_pdbx_refine_tls.S[3][2]_esd 
_pdbx_refine_tls.S[3][3] 
_pdbx_refine_tls.S[3][3]_esd 
1 'X-RAY DIFFRACTION' ? ? 48.0340 19.1910  314.9542 0.7332 ? 0.0774  ? 0.0538  ? 0.7677 ? -0.1790 ? 0.8781 ? 0.4743 ? -0.4892 ? 
0.6273  ? 0.5750 ? -0.6049 ? 0.8175 ? -0.0690 ? 0.5182  ? 0.1884  ? -0.7570 ? -0.4073 ? -0.5960 ? 1.1167  ? 0.5105  ? 0.0012  ? 
2 'X-RAY DIFFRACTION' ? ? 45.9397 1.1546   319.9836 0.7613 ? -0.0074 ? -0.0208 ? 0.5890 ? -0.0286 ? 0.7115 ? 0.1278 ? -0.2031 ? 
0.0486  ? 0.4545 ? 0.0982  ? 0.2167 ? -0.2147 ? 0.8948  ? -0.1075 ? -0.1113 ? 0.1664  ? -0.6507 ? -0.1178 ? -0.6949 ? 0.0010  ? 
3 'X-RAY DIFFRACTION' ? ? 51.1097 13.7150  315.6010 0.7170 ? -0.0497 ? 0.1197  ? 0.5672 ? -0.1061 ? 0.8007 ? 0.2425 ? 0.0993  ? 
0.2936  ? 0.0589 ? 0.1816  ? 0.4860 ? -0.6757 ? 0.1955  ? 0.5104  ? -0.2893 ? 0.2143  ? -0.1226 ? 0.1176  ? -0.1109 ? 0.0006  ? 
4 'X-RAY DIFFRACTION' ? ? 69.5436 19.8698  319.0855 0.6469 ? -0.0321 ? -0.0424 ? 0.9556 ? -0.0553 ? 1.0780 ? 0.5954 ? -0.2439 ? 
0.3916  ? 0.9703 ? -0.6950 ? 0.5783 ? 0.0348  ? 0.9520  ? -1.1130 ? -0.3558 ? 0.8787  ? -0.0619 ? 0.5339  ? 0.4162  ? 0.0137  ? 
5 'X-RAY DIFFRACTION' ? ? 70.3314 -10.4381 357.8871 1.7978 ? -0.0785 ? -0.4449 ? 2.0205 ? 0.2452  ? 0.7158 ? 5.4197 ? -0.6789 ? 
0.2031  ? 0.7599 ? 0.4293  ? 0.3298 ? -0.4373 ? -0.9263 ? 0.0995  ? 1.4756  ? 0.4195  ? -0.5035 ? 1.3481  ? 0.1397  ? 0.6066  ? 
6 'X-RAY DIFFRACTION' ? ? 78.5250 -24.8887 367.4228 1.0374 ? 0.0893  ? -0.2018 ? 1.4578 ? -0.1877 ? 0.7214 ? 0.0046 ? -0.0202 ? 
0.0047  ? 0.0691 ? -0.0184 ? 0.0068 ? -0.0899 ? -0.2028 ? 0.5001  ? 0.8389  ? 0.7471  ? -1.0786 ? -0.6920 ? 0.3415  ? 0.0060  ? 
7 'X-RAY DIFFRACTION' ? ? 75.3178 -10.7416 359.4929 1.3951 ? 0.1623  ? -0.4007 ? 1.9950 ? 0.0297  ? 0.6296 ? 3.7834 ? -1.0847 ? 
-1.6789 ? 0.3501 ? 0.4915  ? 0.7462 ? -0.9410 ? -0.4720 ? 0.0443  ? -0.5019 ? 0.0801  ? -0.1131 ? 0.3305  ? 0.4012  ? -1.5226 ? 
8 'X-RAY DIFFRACTION' ? ? 87.2368 4.6765   362.7994 1.5402 ? -0.2033 ? -0.0188 ? 1.8470 ? 0.5361  ? 0.9612 ? 0.0750 ? -0.3101 ? 
-0.0932 ? 1.5418 ? 0.5262  ? 0.1853 ? 0.1724  ? -0.2893 ? -0.9052 ? 1.7091  ? 0.4424  ? -0.1736 ? 0.7103  ? 0.5820  ? 0.7082  ? 
# 
loop_
_pdbx_refine_tls_group.id 
_pdbx_refine_tls_group.pdbx_refine_id 
_pdbx_refine_tls_group.refine_tls_id 
_pdbx_refine_tls_group.beg_label_asym_id 
_pdbx_refine_tls_group.beg_label_seq_id 
_pdbx_refine_tls_group.beg_auth_asym_id 
_pdbx_refine_tls_group.beg_auth_seq_id 
_pdbx_refine_tls_group.end_label_asym_id 
_pdbx_refine_tls_group.end_label_seq_id 
_pdbx_refine_tls_group.end_auth_asym_id 
_pdbx_refine_tls_group.end_auth_seq_id 
_pdbx_refine_tls_group.selection 
_pdbx_refine_tls_group.selection_details 
1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? 
;chain 'A' and (resseq 3:11)
;
2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? 
;chain 'A' and (resseq 12:18)
;
3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? 
;chain 'B' and (resseq 37:42)
;
4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? 
;chain 'B' and (resseq 43:47)
;
5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? 
;chain 'E' and (resseq 3:13)
;
6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? 
;chain 'E' and (resseq 14:18)
;
7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? 
;chain 'F' and (resseq 37:42)
;
8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? 
;chain 'F' and (resseq 43:47)
;
# 
loop_
_software.citation_id 
_software.classification 
_software.compiler_name 
_software.compiler_version 
_software.contact_author 
_software.contact_author_email 
_software.date 
_software.description 
_software.dependencies 
_software.hardware 
_software.language 
_software.location 
_software.mods 
_software.name 
_software.os 
_software.os_version 
_software.type 
_software.version 
_software.pdbx_ordinal 
? refinement       ? ? ? ? ? ? ? ? ? ? ? PHENIX   ? ? ? 1.7.3_928 1 
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? .         2 
? 'data scaling'   ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? .         3 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
A  OP3    O  N N 1   
A  P      P  N N 2   
A  OP1    O  N N 3   
A  OP2    O  N N 4   
A  "O5'"  O  N N 5   
A  "C5'"  C  N N 6   
A  "C4'"  C  N R 7   
A  "O4'"  O  N N 8   
A  "C3'"  C  N S 9   
A  "O3'"  O  N N 10  
A  "C2'"  C  N R 11  
A  "O2'"  O  N N 12  
A  "C1'"  C  N R 13  
A  N9     N  Y N 14  
A  C8     C  Y N 15  
A  N7     N  Y N 16  
A  C5     C  Y N 17  
A  C6     C  Y N 18  
A  N6     N  N N 19  
A  N1     N  Y N 20  
A  C2     C  Y N 21  
A  N3     N  Y N 22  
A  C4     C  Y N 23  
A  HOP3   H  N N 24  
A  HOP2   H  N N 25  
A  "H5'"  H  N N 26  
A  "H5''" H  N N 27  
A  "H4'"  H  N N 28  
A  "H3'"  H  N N 29  
A  "HO3'" H  N N 30  
A  "H2'"  H  N N 31  
A  "HO2'" H  N N 32  
A  "H1'"  H  N N 33  
A  H8     H  N N 34  
A  H61    H  N N 35  
A  H62    H  N N 36  
A  H2     H  N N 37  
C  OP3    O  N N 38  
C  P      P  N N 39  
C  OP1    O  N N 40  
C  OP2    O  N N 41  
C  "O5'"  O  N N 42  
C  "C5'"  C  N N 43  
C  "C4'"  C  N R 44  
C  "O4'"  O  N N 45  
C  "C3'"  C  N S 46  
C  "O3'"  O  N N 47  
C  "C2'"  C  N R 48  
C  "O2'"  O  N N 49  
C  "C1'"  C  N R 50  
C  N1     N  N N 51  
C  C2     C  N N 52  
C  O2     O  N N 53  
C  N3     N  N N 54  
C  C4     C  N N 55  
C  N4     N  N N 56  
C  C5     C  N N 57  
C  C6     C  N N 58  
C  HOP3   H  N N 59  
C  HOP2   H  N N 60  
C  "H5'"  H  N N 61  
C  "H5''" H  N N 62  
C  "H4'"  H  N N 63  
C  "H3'"  H  N N 64  
C  "HO3'" H  N N 65  
C  "H2'"  H  N N 66  
C  "HO2'" H  N N 67  
C  "H1'"  H  N N 68  
C  H41    H  N N 69  
C  H42    H  N N 70  
C  H5     H  N N 71  
C  H6     H  N N 72  
CL CL     CL N N 73  
G  OP3    O  N N 74  
G  P      P  N N 75  
G  OP1    O  N N 76  
G  OP2    O  N N 77  
G  "O5'"  O  N N 78  
G  "C5'"  C  N N 79  
G  "C4'"  C  N R 80  
G  "O4'"  O  N N 81  
G  "C3'"  C  N S 82  
G  "O3'"  O  N N 83  
G  "C2'"  C  N R 84  
G  "O2'"  O  N N 85  
G  "C1'"  C  N R 86  
G  N9     N  Y N 87  
G  C8     C  Y N 88  
G  N7     N  Y N 89  
G  C5     C  Y N 90  
G  C6     C  N N 91  
G  O6     O  N N 92  
G  N1     N  N N 93  
G  C2     C  N N 94  
G  N2     N  N N 95  
G  N3     N  N N 96  
G  C4     C  Y N 97  
G  HOP3   H  N N 98  
G  HOP2   H  N N 99  
G  "H5'"  H  N N 100 
G  "H5''" H  N N 101 
G  "H4'"  H  N N 102 
G  "H3'"  H  N N 103 
G  "HO3'" H  N N 104 
G  "H2'"  H  N N 105 
G  "HO2'" H  N N 106 
G  "H1'"  H  N N 107 
G  H8     H  N N 108 
G  H1     H  N N 109 
G  H21    H  N N 110 
G  H22    H  N N 111 
U  OP3    O  N N 112 
U  P      P  N N 113 
U  OP1    O  N N 114 
U  OP2    O  N N 115 
U  "O5'"  O  N N 116 
U  "C5'"  C  N N 117 
U  "C4'"  C  N R 118 
U  "O4'"  O  N N 119 
U  "C3'"  C  N S 120 
U  "O3'"  O  N N 121 
U  "C2'"  C  N R 122 
U  "O2'"  O  N N 123 
U  "C1'"  C  N R 124 
U  N1     N  N N 125 
U  C2     C  N N 126 
U  O2     O  N N 127 
U  N3     N  N N 128 
U  C4     C  N N 129 
U  O4     O  N N 130 
U  C5     C  N N 131 
U  C6     C  N N 132 
U  HOP3   H  N N 133 
U  HOP2   H  N N 134 
U  "H5'"  H  N N 135 
U  "H5''" H  N N 136 
U  "H4'"  H  N N 137 
U  "H3'"  H  N N 138 
U  "HO3'" H  N N 139 
U  "H2'"  H  N N 140 
U  "HO2'" H  N N 141 
U  "H1'"  H  N N 142 
U  H3     H  N N 143 
U  H5     H  N N 144 
U  H6     H  N N 145 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A OP3   P      sing N N 1   
A OP3   HOP3   sing N N 2   
A P     OP1    doub N N 3   
A P     OP2    sing N N 4   
A P     "O5'"  sing N N 5   
A OP2   HOP2   sing N N 6   
A "O5'" "C5'"  sing N N 7   
A "C5'" "C4'"  sing N N 8   
A "C5'" "H5'"  sing N N 9   
A "C5'" "H5''" sing N N 10  
A "C4'" "O4'"  sing N N 11  
A "C4'" "C3'"  sing N N 12  
A "C4'" "H4'"  sing N N 13  
A "O4'" "C1'"  sing N N 14  
A "C3'" "O3'"  sing N N 15  
A "C3'" "C2'"  sing N N 16  
A "C3'" "H3'"  sing N N 17  
A "O3'" "HO3'" sing N N 18  
A "C2'" "O2'"  sing N N 19  
A "C2'" "C1'"  sing N N 20  
A "C2'" "H2'"  sing N N 21  
A "O2'" "HO2'" sing N N 22  
A "C1'" N9     sing N N 23  
A "C1'" "H1'"  sing N N 24  
A N9    C8     sing Y N 25  
A N9    C4     sing Y N 26  
A C8    N7     doub Y N 27  
A C8    H8     sing N N 28  
A N7    C5     sing Y N 29  
A C5    C6     sing Y N 30  
A C5    C4     doub Y N 31  
A C6    N6     sing N N 32  
A C6    N1     doub Y N 33  
A N6    H61    sing N N 34  
A N6    H62    sing N N 35  
A N1    C2     sing Y N 36  
A C2    N3     doub Y N 37  
A C2    H2     sing N N 38  
A N3    C4     sing Y N 39  
C OP3   P      sing N N 40  
C OP3   HOP3   sing N N 41  
C P     OP1    doub N N 42  
C P     OP2    sing N N 43  
C P     "O5'"  sing N N 44  
C OP2   HOP2   sing N N 45  
C "O5'" "C5'"  sing N N 46  
C "C5'" "C4'"  sing N N 47  
C "C5'" "H5'"  sing N N 48  
C "C5'" "H5''" sing N N 49  
C "C4'" "O4'"  sing N N 50  
C "C4'" "C3'"  sing N N 51  
C "C4'" "H4'"  sing N N 52  
C "O4'" "C1'"  sing N N 53  
C "C3'" "O3'"  sing N N 54  
C "C3'" "C2'"  sing N N 55  
C "C3'" "H3'"  sing N N 56  
C "O3'" "HO3'" sing N N 57  
C "C2'" "O2'"  sing N N 58  
C "C2'" "C1'"  sing N N 59  
C "C2'" "H2'"  sing N N 60  
C "O2'" "HO2'" sing N N 61  
C "C1'" N1     sing N N 62  
C "C1'" "H1'"  sing N N 63  
C N1    C2     sing N N 64  
C N1    C6     sing N N 65  
C C2    O2     doub N N 66  
C C2    N3     sing N N 67  
C N3    C4     doub N N 68  
C C4    N4     sing N N 69  
C C4    C5     sing N N 70  
C N4    H41    sing N N 71  
C N4    H42    sing N N 72  
C C5    C6     doub N N 73  
C C5    H5     sing N N 74  
C C6    H6     sing N N 75  
G OP3   P      sing N N 76  
G OP3   HOP3   sing N N 77  
G P     OP1    doub N N 78  
G P     OP2    sing N N 79  
G P     "O5'"  sing N N 80  
G OP2   HOP2   sing N N 81  
G "O5'" "C5'"  sing N N 82  
G "C5'" "C4'"  sing N N 83  
G "C5'" "H5'"  sing N N 84  
G "C5'" "H5''" sing N N 85  
G "C4'" "O4'"  sing N N 86  
G "C4'" "C3'"  sing N N 87  
G "C4'" "H4'"  sing N N 88  
G "O4'" "C1'"  sing N N 89  
G "C3'" "O3'"  sing N N 90  
G "C3'" "C2'"  sing N N 91  
G "C3'" "H3'"  sing N N 92  
G "O3'" "HO3'" sing N N 93  
G "C2'" "O2'"  sing N N 94  
G "C2'" "C1'"  sing N N 95  
G "C2'" "H2'"  sing N N 96  
G "O2'" "HO2'" sing N N 97  
G "C1'" N9     sing N N 98  
G "C1'" "H1'"  sing N N 99  
G N9    C8     sing Y N 100 
G N9    C4     sing Y N 101 
G C8    N7     doub Y N 102 
G C8    H8     sing N N 103 
G N7    C5     sing Y N 104 
G C5    C6     sing N N 105 
G C5    C4     doub Y N 106 
G C6    O6     doub N N 107 
G C6    N1     sing N N 108 
G N1    C2     sing N N 109 
G N1    H1     sing N N 110 
G C2    N2     sing N N 111 
G C2    N3     doub N N 112 
G N2    H21    sing N N 113 
G N2    H22    sing N N 114 
G N3    C4     sing N N 115 
U OP3   P      sing N N 116 
U OP3   HOP3   sing N N 117 
U P     OP1    doub N N 118 
U P     OP2    sing N N 119 
U P     "O5'"  sing N N 120 
U OP2   HOP2   sing N N 121 
U "O5'" "C5'"  sing N N 122 
U "C5'" "C4'"  sing N N 123 
U "C5'" "H5'"  sing N N 124 
U "C5'" "H5''" sing N N 125 
U "C4'" "O4'"  sing N N 126 
U "C4'" "C3'"  sing N N 127 
U "C4'" "H4'"  sing N N 128 
U "O4'" "C1'"  sing N N 129 
U "C3'" "O3'"  sing N N 130 
U "C3'" "C2'"  sing N N 131 
U "C3'" "H3'"  sing N N 132 
U "O3'" "HO3'" sing N N 133 
U "C2'" "O2'"  sing N N 134 
U "C2'" "C1'"  sing N N 135 
U "C2'" "H2'"  sing N N 136 
U "O2'" "HO2'" sing N N 137 
U "C1'" N1     sing N N 138 
U "C1'" "H1'"  sing N N 139 
U N1    C2     sing N N 140 
U N1    C6     sing N N 141 
U C2    O2     doub N N 142 
U C2    N3     sing N N 143 
U N3    C4     sing N N 144 
U N3    H3     sing N N 145 
U C4    O4     doub N N 146 
U C4    C5     sing N N 147 
U C5    C6     doub N N 148 
U C5    H5     sing N N 149 
U C6    H6     sing N N 150 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
5CNR 'double helix'        
5CNR 'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A G 1  1_555 B C 7 1_555 0.439  -0.135 0.023  -3.906 -8.593  0.692   1  A_G3:C43_B  A 3  ? B 43 ? 19 1 
1 A U 2  1_555 B A 6 1_555 0.274  -0.106 -0.154 4.456  -11.958 -2.844  2  A_U4:A42_B  A 4  ? B 42 ? 20 1 
1 A C 3  1_555 B G 5 1_555 0.694  0.168  0.186  -3.929 -5.423  5.434   3  A_C5:G41_B  A 5  ? B 41 ? 19 1 
1 A U 4  1_555 B A 3 1_555 4.167  -2.161 0.494  -5.227 3.474   -92.074 4  A_U6:A39_B  A 6  ? B 39 ? 24 4 
1 A C 10 1_555 B G 4 1_555 0.188  -0.223 -1.058 22.228 -8.966  2.232   5  A_C12:G40_B A 12 ? B 40 ? 19 1 
1 A C 11 1_555 B G 2 1_555 -0.067 -0.105 0.157  11.398 -15.094 -0.673  6  A_C13:G38_B A 13 ? B 38 ? 19 1 
1 A U 12 1_555 B A 1 1_555 -0.110 -0.067 -0.033 12.118 -18.079 -4.912  7  A_U14:A37_B A 14 ? B 37 ? 20 1 
1 C U 2  1_555 D A 6 1_555 -0.200 -0.035 -0.332 -0.162 -8.260  1.669   8  E_U4:A42_F  E 4  ? F 42 ? 20 1 
1 C C 3  1_555 D G 5 1_555 -0.481 -0.066 -1.065 5.524  -11.785 -9.403  9  E_C5:G41_F  E 5  ? F 41 ? ?  1 
1 C U 4  1_555 D A 3 1_555 4.256  -2.635 1.392  -4.656 20.378  -85.474 10 E_U6:A39_F  E 6  ? F 39 ? 24 4 
1 C C 10 1_555 D G 4 1_555 -0.395 0.680  -1.630 36.917 -6.308  -16.674 11 E_C12:G40_F E 12 ? F 40 ? ?  ? 
1 C C 11 1_555 D G 2 1_555 0.433  -0.204 -0.708 10.899 -14.185 -12.595 12 E_C13:G38_F E 13 ? F 38 ? ?  1 
1 C U 12 1_555 D A 1 1_555 -0.655 -0.079 0.098  1.136  -12.010 -3.160  13 E_U14:A37_F E 14 ? F 37 ? 20 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A G 1  1_555 B C 7 1_555 A U 2  1_555 B A 6 1_555 -0.545 -1.594 3.036 -0.036 1.614  30.427 -3.328 1.031  2.950 3.072  0.069   
30.468 1 AA_G3U4:A42C43_BB   A 3  ? B 43 ? A 4  ? B 42 ? 
1 A U 2  1_555 B A 6 1_555 A C 3  1_555 B G 5 1_555 0.685  -1.659 3.408 -0.174 6.303  34.320 -3.722 -1.168 3.061 10.571 0.292   
34.877 2 AA_U4C5:G41A42_BB   A 4  ? B 42 ? A 5  ? B 41 ? 
1 A C 3  1_555 B G 5 1_555 A U 4  1_555 B A 3 1_555 -3.318 -1.833 3.293 1.971  1.612  71.551 -1.621 2.903  3.177 1.378  -1.685  
71.591 3 AA_C5U6:A39G41_BB   A 5  ? B 41 ? A 6  ? B 39 ? 
1 A C 10 1_555 B G 4 1_555 A C 11 1_555 B G 2 1_555 1.861  -1.543 3.389 -6.559 10.509 53.926 -2.262 -2.381 2.839 11.419 7.127   
55.226 4 AA_C12C13:G38G40_BB A 12 ? B 40 ? A 13 ? B 38 ? 
1 A C 11 1_555 B G 2 1_555 A U 12 1_555 B A 1 1_555 -0.017 -1.603 3.239 0.088  5.603  36.569 -3.248 0.038  2.969 8.866  -0.139  
36.982 5 AA_C13U14:A37G38_BB A 13 ? B 38 ? A 14 ? B 37 ? 
1 C U 2  1_555 D A 6 1_555 C C 3  1_555 D G 5 1_555 0.030  -1.337 3.256 8.084  10.017 30.775 -3.899 1.211  2.630 17.924 -14.464 
33.298 6 EE_U4C5:G41A42_FF   E 4  ? F 42 ? E 5  ? F 41 ? 
1 C C 3  1_555 D G 5 1_555 C U 4  1_555 D A 3 1_555 -2.233 -2.282 3.904 -7.016 13.557 84.179 -2.049 1.459  3.717 10.041 5.196   
85.297 7 EE_C5U6:A39G41_FF   E 5  ? F 41 ? E 6  ? F 39 ? 
1 C C 10 1_555 D G 4 1_555 C C 11 1_555 D G 2 1_555 2.118  -1.988 3.661 -2.553 15.336 62.313 -2.567 -2.113 3.068 14.580 2.427   
64.034 8 EE_C12C13:G38G40_FF E 12 ? F 40 ? E 13 ? F 38 ? 
1 C C 11 1_555 D G 2 1_555 C U 12 1_555 D A 1 1_555 0.698  -2.117 3.508 -6.296 9.058  32.332 -5.003 -2.158 2.657 15.706 10.917  
34.115 9 EE_C13U14:A37G38_FF E 13 ? F 38 ? E 14 ? F 37 ? 
# 
_pdbx_audit_support.funding_organization   'UCSD Academic Senate' 
_pdbx_audit_support.country                'United States' 
_pdbx_audit_support.grant_number           RM069B 
_pdbx_audit_support.ordinal                1 
# 
_pdbx_entity_nonpoly.entity_id   3 
_pdbx_entity_nonpoly.name        'CHLORIDE ION' 
_pdbx_entity_nonpoly.comp_id     CL 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   4P97 
_pdbx_initial_refinement_model.details          ? 
#