HEADER OXIDOREDUCTASE 20-JUL-15 5COA TITLE CRYSTAL STRUCTURE OF IRIDOID SYNTHASE AT 2.2-ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRIDOID SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 26-388; COMPND 5 EC: 1.3.1.99; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CATHARANTHUS ROSEUS; SOURCE 3 ORGANISM_COMMON: MADAGASCAR PERIWINKLE; SOURCE 4 ORGANISM_TAXID: 4058; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SDR, P5BR, ROSSMANN FOLD, 1-4 ADDITION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.QIN,Y.ZHU,Z.DING,X.ZHANG,S.YE,R.ZHANG REVDAT 3 08-NOV-23 5COA 1 JRNL REMARK REVDAT 2 30-MAR-16 5COA 1 JRNL REVDAT 1 09-MAR-16 5COA 0 JRNL AUTH L.QIN,Y.ZHU,Z.DING,X.ZHANG,S.YE,R.ZHANG JRNL TITL STRUCTURE OF IRIDOID SYNTHASE IN COMPLEX WITH JRNL TITL 2 NADP(+)/8-OXOGERANIAL REVEALS THE STRUCTURAL BASIS OF ITS JRNL TITL 3 SUBSTRATE SPECIFICITY. JRNL REF J.STRUCT.BIOL. V. 194 224 2016 JRNL REFN ESSN 1095-8657 JRNL PMID 26868105 JRNL DOI 10.1016/J.JSB.2016.02.010 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 56809 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2879 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 6.0536 0.97 2711 159 0.1894 0.2029 REMARK 3 2 6.0536 - 4.8078 1.00 2664 142 0.1819 0.2101 REMARK 3 3 4.8078 - 4.2008 1.00 2655 126 0.1493 0.1973 REMARK 3 4 4.2008 - 3.8171 0.96 2520 136 0.1565 0.1719 REMARK 3 5 3.8171 - 3.5437 1.00 2565 163 0.1549 0.1786 REMARK 3 6 3.5437 - 3.3349 1.00 2597 147 0.1624 0.1796 REMARK 3 7 3.3349 - 3.1680 1.00 2570 140 0.1724 0.1862 REMARK 3 8 3.1680 - 3.0301 1.00 2603 116 0.1781 0.2265 REMARK 3 9 3.0301 - 2.9135 1.00 2584 134 0.1810 0.2206 REMARK 3 10 2.9135 - 2.8130 1.00 2567 129 0.1864 0.2360 REMARK 3 11 2.8130 - 2.7251 0.97 2504 128 0.1807 0.2183 REMARK 3 12 2.7251 - 2.6472 1.00 2553 151 0.1814 0.2346 REMARK 3 13 2.6472 - 2.5775 1.00 2537 134 0.1827 0.2175 REMARK 3 14 2.5775 - 2.5147 1.00 2546 136 0.1776 0.2348 REMARK 3 15 2.5147 - 2.4575 1.00 2563 131 0.1811 0.2115 REMARK 3 16 2.4575 - 2.4052 0.99 2538 137 0.1846 0.2412 REMARK 3 17 2.4052 - 2.3571 1.00 2530 136 0.1869 0.2377 REMARK 3 18 2.3571 - 2.3126 1.00 2546 142 0.1915 0.2387 REMARK 3 19 2.3126 - 2.2713 1.00 2531 133 0.1957 0.2349 REMARK 3 20 2.2713 - 2.2328 0.99 2526 140 0.2030 0.2857 REMARK 3 21 2.2328 - 2.1968 0.99 2520 119 0.2176 0.2549 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5846 REMARK 3 ANGLE : 0.923 7933 REMARK 3 CHIRALITY : 0.062 869 REMARK 3 PLANARITY : 0.004 999 REMARK 3 DIHEDRAL : 12.178 2126 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0314 59.0091 37.7467 REMARK 3 T TENSOR REMARK 3 T11: 0.2528 T22: 0.1853 REMARK 3 T33: 0.2020 T12: -0.0627 REMARK 3 T13: 0.0163 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 4.4003 L22: 2.2091 REMARK 3 L33: 4.2563 L12: 0.3892 REMARK 3 L13: -0.0747 L23: 0.5493 REMARK 3 S TENSOR REMARK 3 S11: 0.0238 S12: 0.3531 S13: -0.0006 REMARK 3 S21: -0.2217 S22: 0.0851 S23: -0.2550 REMARK 3 S31: -0.3106 S32: 0.3519 S33: -0.1210 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6529 46.7373 47.8128 REMARK 3 T TENSOR REMARK 3 T11: 0.2043 T22: 0.1871 REMARK 3 T33: 0.1812 T12: 0.0405 REMARK 3 T13: 0.0343 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.3651 L22: 2.2988 REMARK 3 L33: 2.4014 L12: 0.6042 REMARK 3 L13: -0.2812 L23: 0.6738 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: -0.1193 S13: -0.2567 REMARK 3 S21: 0.1328 S22: -0.0553 S23: -0.1144 REMARK 3 S31: 0.0110 S32: 0.1010 S33: 0.0907 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 387 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4742 39.1230 27.9749 REMARK 3 T TENSOR REMARK 3 T11: 0.1464 T22: 0.1792 REMARK 3 T33: 0.1742 T12: 0.0234 REMARK 3 T13: 0.0337 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.1076 L22: 1.8805 REMARK 3 L33: 2.2898 L12: -0.4479 REMARK 3 L13: -0.6182 L23: 1.1937 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: 0.1682 S13: -0.1230 REMARK 3 S21: -0.1207 S22: -0.1378 S23: -0.0315 REMARK 3 S31: -0.0182 S32: -0.1554 S33: 0.1286 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3913 45.3228 37.8045 REMARK 3 T TENSOR REMARK 3 T11: 0.2080 T22: 0.5527 REMARK 3 T33: 0.3291 T12: -0.0242 REMARK 3 T13: -0.0067 T23: -0.1505 REMARK 3 L TENSOR REMARK 3 L11: 2.8350 L22: 1.6560 REMARK 3 L33: 0.8310 L12: -0.7502 REMARK 3 L13: -0.5518 L23: -0.1421 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.5509 S13: -0.5289 REMARK 3 S21: -0.0565 S22: -0.0956 S23: 0.4648 REMARK 3 S31: 0.1090 S32: -0.3924 S33: 0.1011 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 215 THROUGH 387 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4989 34.9984 52.0721 REMARK 3 T TENSOR REMARK 3 T11: 0.2058 T22: 0.2397 REMARK 3 T33: 0.2582 T12: -0.0450 REMARK 3 T13: 0.0832 T23: -0.0657 REMARK 3 L TENSOR REMARK 3 L11: 1.2846 L22: 1.4400 REMARK 3 L33: 2.3310 L12: -0.1677 REMARK 3 L13: -0.3990 L23: -1.0145 REMARK 3 S TENSOR REMARK 3 S11: -0.1477 S12: 0.0586 S13: -0.3065 REMARK 3 S21: 0.1214 S22: -0.0124 S23: 0.0679 REMARK 3 S31: 0.1570 S32: -0.2723 S33: 0.1485 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5COA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211947. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97852 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56895 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 38.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.30 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2V6G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 1.98 M AMMONIUM REMARK 280 SULFATE, 1% PEG 400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 80.14500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 80.14500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.78800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 80.14500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 80.14500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.78800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 80.14500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.14500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.78800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 80.14500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.14500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.78800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -74.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 24 REMARK 465 ALA A 25 REMARK 465 LYS A 26 REMARK 465 PRO A 388 REMARK 465 MET B 24 REMARK 465 ALA B 25 REMARK 465 LYS B 26 REMARK 465 GLY B 150 REMARK 465 ILE B 151 REMARK 465 PHE B 152 REMARK 465 GLU B 153 REMARK 465 GLU B 154 REMARK 465 GLY B 155 REMARK 465 SER B 156 REMARK 465 LYS B 157 REMARK 465 VAL B 158 REMARK 465 VAL B 159 REMARK 465 PRO B 388 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 321 O HOH B 501 1.83 REMARK 500 O HOH B 631 O HOH B 667 1.83 REMARK 500 OE1 GLU A 336 O HOH A 2101 1.87 REMARK 500 O HOH A 2238 O HOH A 2313 1.91 REMARK 500 O HOH A 2266 O HOH A 2307 1.91 REMARK 500 O HOH A 2309 O HOH A 2311 1.93 REMARK 500 O HOH A 2140 O HOH A 2225 1.94 REMARK 500 O HOH A 2217 O HOH A 2329 1.94 REMARK 500 O HOH A 2335 O HOH A 2351 2.00 REMARK 500 O HOH A 2192 O HOH A 2286 2.00 REMARK 500 OE1 GLU B 336 O HOH B 502 2.01 REMARK 500 O HOH A 2114 O HOH A 2300 2.01 REMARK 500 O HOH B 505 O HOH B 537 2.01 REMARK 500 O HOH B 640 O HOH B 658 2.02 REMARK 500 O HOH B 638 O HOH B 644 2.04 REMARK 500 O HOH B 649 O HOH B 652 2.05 REMARK 500 O HOH A 2336 O HOH B 589 2.07 REMARK 500 O HOH B 587 O HOH B 635 2.08 REMARK 500 O HOH A 2207 O HOH A 2314 2.08 REMARK 500 O HOH A 2251 O HOH A 2307 2.09 REMARK 500 O HOH A 2359 O HOH B 636 2.09 REMARK 500 O4 SO4 B 402 O HOH B 503 2.09 REMARK 500 O HOH B 614 O HOH B 644 2.09 REMARK 500 O HOH B 615 O HOH B 646 2.11 REMARK 500 OD1 ASN A 88 O HOH A 2102 2.11 REMARK 500 O HOH A 2278 O HOH A 2337 2.12 REMARK 500 OE1 GLU A 311 O HOH A 2103 2.13 REMARK 500 OE1 GLU A 291 O HOH A 2104 2.14 REMARK 500 O HOH B 634 O HOH B 664 2.16 REMARK 500 O HOH A 2153 O HOH A 2345 2.17 REMARK 500 O HOH B 585 O HOH B 623 2.17 REMARK 500 OE1 GLU A 187 O HOH A 2105 2.17 REMARK 500 O HOH B 600 O HOH B 657 2.17 REMARK 500 O HOH A 2196 O HOH A 2306 2.18 REMARK 500 O GLN B 82 O HOH B 504 2.18 REMARK 500 O HOH A 2293 O HOH A 2342 2.18 REMARK 500 O HOH A 2269 O HOH B 602 2.18 REMARK 500 OH TYR A 300 O HOH A 2106 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 110 -92.81 -94.21 REMARK 500 CYS A 115 -71.39 -43.60 REMARK 500 THR A 143 -108.34 -112.97 REMARK 500 ALA A 202 -172.80 -69.71 REMARK 500 GLU B 113 71.95 -169.88 REMARK 500 THR B 143 -106.96 -119.75 REMARK 500 PRO B 175 77.44 -62.36 REMARK 500 ALA B 202 -169.47 -73.73 REMARK 500 SER B 211 77.60 -156.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5COB RELATED DB: PDB DBREF 5COA A 26 388 UNP K7WDL7 IRIS_CATRO 26 388 DBREF 5COA B 26 388 UNP K7WDL7 IRIS_CATRO 26 388 SEQADV 5COA MET A 24 UNP K7WDL7 EXPRESSION TAG SEQADV 5COA ALA A 25 UNP K7WDL7 EXPRESSION TAG SEQADV 5COA MET B 24 UNP K7WDL7 EXPRESSION TAG SEQADV 5COA ALA B 25 UNP K7WDL7 EXPRESSION TAG SEQRES 1 A 365 MET ALA LYS SER TYR LYS SER VAL ALA LEU VAL VAL GLY SEQRES 2 A 365 VAL THR GLY ILE VAL GLY SER SER LEU ALA GLU VAL LEU SEQRES 3 A 365 LYS LEU PRO ASP THR PRO GLY GLY PRO TRP LYS VAL TYR SEQRES 4 A 365 GLY VAL ALA ARG ARG PRO CYS PRO VAL TRP LEU ALA LYS SEQRES 5 A 365 LYS PRO VAL GLU TYR ILE GLN CYS ASP VAL SER ASP ASN SEQRES 6 A 365 GLN GLU THR ILE SER LYS LEU SER PRO LEU LYS ASP ILE SEQRES 7 A 365 THR HIS ILE PHE TYR VAL SER TRP ILE GLY SER GLU ASP SEQRES 8 A 365 CYS GLN THR ASN ALA THR MET PHE LYS ASN ILE LEU ASN SEQRES 9 A 365 SER VAL ILE PRO ASN ALA SER ASN LEU GLN HIS VAL CYS SEQRES 10 A 365 LEU GLN THR GLY ILE LYS HIS TYR PHE GLY ILE PHE GLU SEQRES 11 A 365 GLU GLY SER LYS VAL VAL PRO HIS ASP SER PRO PHE THR SEQRES 12 A 365 GLU ASP LEU PRO ARG LEU ASN VAL PRO ASN PHE TYR HIS SEQRES 13 A 365 ASP LEU GLU ASP ILE LEU TYR GLU GLU THR GLY LYS ASN SEQRES 14 A 365 ASN LEU THR TRP SER VAL HIS ARG PRO ALA LEU VAL PHE SEQRES 15 A 365 GLY PHE SER PRO CYS SER MET MET ASN ILE VAL SER THR SEQRES 16 A 365 LEU CYS VAL TYR ALA THR ILE CYS LYS HIS GLU ASN LYS SEQRES 17 A 365 ALA LEU VAL TYR PRO GLY SER LYS ASN SER TRP ASN CYS SEQRES 18 A 365 TYR ALA ASP ALA VAL ASP ALA ASP LEU VAL ALA GLU HIS SEQRES 19 A 365 GLU ILE TRP ALA ALA VAL ASP PRO LYS ALA LYS ASN GLN SEQRES 20 A 365 VAL LEU ASN CYS ASN ASN GLY ASP VAL PHE LYS TRP LYS SEQRES 21 A 365 HIS ILE TRP LYS LYS LEU ALA GLU GLU PHE GLY ILE GLU SEQRES 22 A 365 MET VAL GLY TYR VAL GLU GLY LYS GLU GLN VAL SER LEU SEQRES 23 A 365 ALA GLU LEU MET LYS ASP LYS ASP GLN VAL TRP ASP GLU SEQRES 24 A 365 ILE VAL LYS LYS ASN ASN LEU VAL PRO THR LYS LEU LYS SEQRES 25 A 365 GLU ILE ALA ALA PHE TRP PHE ALA ASP ILE ALA PHE CYS SEQRES 26 A 365 SER GLU ASN LEU ILE SER SER MET ASN LYS SER LYS GLU SEQRES 27 A 365 LEU GLY PHE LEU GLY PHE ARG ASN SER MET LYS SER PHE SEQRES 28 A 365 VAL SER CYS ILE ASP LYS MET ARG ASP TYR ARG PHE ILE SEQRES 29 A 365 PRO SEQRES 1 B 365 MET ALA LYS SER TYR LYS SER VAL ALA LEU VAL VAL GLY SEQRES 2 B 365 VAL THR GLY ILE VAL GLY SER SER LEU ALA GLU VAL LEU SEQRES 3 B 365 LYS LEU PRO ASP THR PRO GLY GLY PRO TRP LYS VAL TYR SEQRES 4 B 365 GLY VAL ALA ARG ARG PRO CYS PRO VAL TRP LEU ALA LYS SEQRES 5 B 365 LYS PRO VAL GLU TYR ILE GLN CYS ASP VAL SER ASP ASN SEQRES 6 B 365 GLN GLU THR ILE SER LYS LEU SER PRO LEU LYS ASP ILE SEQRES 7 B 365 THR HIS ILE PHE TYR VAL SER TRP ILE GLY SER GLU ASP SEQRES 8 B 365 CYS GLN THR ASN ALA THR MET PHE LYS ASN ILE LEU ASN SEQRES 9 B 365 SER VAL ILE PRO ASN ALA SER ASN LEU GLN HIS VAL CYS SEQRES 10 B 365 LEU GLN THR GLY ILE LYS HIS TYR PHE GLY ILE PHE GLU SEQRES 11 B 365 GLU GLY SER LYS VAL VAL PRO HIS ASP SER PRO PHE THR SEQRES 12 B 365 GLU ASP LEU PRO ARG LEU ASN VAL PRO ASN PHE TYR HIS SEQRES 13 B 365 ASP LEU GLU ASP ILE LEU TYR GLU GLU THR GLY LYS ASN SEQRES 14 B 365 ASN LEU THR TRP SER VAL HIS ARG PRO ALA LEU VAL PHE SEQRES 15 B 365 GLY PHE SER PRO CYS SER MET MET ASN ILE VAL SER THR SEQRES 16 B 365 LEU CYS VAL TYR ALA THR ILE CYS LYS HIS GLU ASN LYS SEQRES 17 B 365 ALA LEU VAL TYR PRO GLY SER LYS ASN SER TRP ASN CYS SEQRES 18 B 365 TYR ALA ASP ALA VAL ASP ALA ASP LEU VAL ALA GLU HIS SEQRES 19 B 365 GLU ILE TRP ALA ALA VAL ASP PRO LYS ALA LYS ASN GLN SEQRES 20 B 365 VAL LEU ASN CYS ASN ASN GLY ASP VAL PHE LYS TRP LYS SEQRES 21 B 365 HIS ILE TRP LYS LYS LEU ALA GLU GLU PHE GLY ILE GLU SEQRES 22 B 365 MET VAL GLY TYR VAL GLU GLY LYS GLU GLN VAL SER LEU SEQRES 23 B 365 ALA GLU LEU MET LYS ASP LYS ASP GLN VAL TRP ASP GLU SEQRES 24 B 365 ILE VAL LYS LYS ASN ASN LEU VAL PRO THR LYS LEU LYS SEQRES 25 B 365 GLU ILE ALA ALA PHE TRP PHE ALA ASP ILE ALA PHE CYS SEQRES 26 B 365 SER GLU ASN LEU ILE SER SER MET ASN LYS SER LYS GLU SEQRES 27 B 365 LEU GLY PHE LEU GLY PHE ARG ASN SER MET LYS SER PHE SEQRES 28 B 365 VAL SER CYS ILE ASP LYS MET ARG ASP TYR ARG PHE ILE SEQRES 29 B 365 PRO HET P6G A2001 19 HET SO4 A2002 5 HET SO4 A2003 5 HET SO4 B 401 5 HET SO4 B 402 5 HETNAM P6G HEXAETHYLENE GLYCOL HETNAM SO4 SULFATE ION HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 3 P6G C12 H26 O7 FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 HOH *434(H2 O) HELIX 1 AA1 GLY A 39 LEU A 49 1 11 HELIX 2 AA2 PRO A 70 LYS A 75 1 6 HELIX 3 AA3 ASP A 87 SER A 96 1 10 HELIX 4 AA4 ASP A 114 ILE A 130 1 17 HELIX 5 AA5 GLY A 144 PHE A 149 5 6 HELIX 6 AA6 ASN A 176 ASN A 192 1 17 HELIX 7 AA7 ASN A 214 GLU A 229 1 16 HELIX 8 AA8 SER A 238 CYS A 244 1 7 HELIX 9 AA9 ALA A 251 ASP A 264 1 14 HELIX 10 AB1 PRO A 265 LYS A 268 5 4 HELIX 11 AB2 LYS A 281 PHE A 293 1 13 HELIX 12 AB3 SER A 308 MET A 313 1 6 HELIX 13 AB4 LYS A 316 ASN A 327 1 12 HELIX 14 AB5 LYS A 333 ALA A 338 1 6 HELIX 15 AB6 ALA A 339 PHE A 347 1 9 HELIX 16 AB7 MET A 356 LEU A 362 1 7 HELIX 17 AB8 ASN A 369 TYR A 384 1 16 HELIX 18 AB9 GLY B 39 LYS B 50 1 12 HELIX 19 AC1 PRO B 70 LYS B 75 1 6 HELIX 20 AC2 ASP B 87 SER B 96 1 10 HELIX 21 AC3 GLN B 116 ILE B 130 1 15 HELIX 22 AC4 GLY B 144 TYR B 148 5 5 HELIX 23 AC5 ASN B 176 ASN B 192 1 17 HELIX 24 AC6 ASN B 214 GLU B 229 1 16 HELIX 25 AC7 SER B 238 CYS B 244 1 7 HELIX 26 AC8 ALA B 251 ASP B 264 1 14 HELIX 27 AC9 PRO B 265 LYS B 268 5 4 HELIX 28 AD1 LYS B 281 PHE B 293 1 13 HELIX 29 AD2 SER B 308 MET B 313 1 6 HELIX 30 AD3 LYS B 316 ASN B 327 1 12 HELIX 31 AD4 LYS B 333 ALA B 338 1 6 HELIX 32 AD5 ALA B 339 PHE B 347 1 9 HELIX 33 AD6 MET B 356 LEU B 362 1 7 HELIX 34 AD7 ASN B 369 TYR B 384 1 16 SHEET 1 AA1 7 GLU A 79 GLN A 82 0 SHEET 2 AA1 7 TRP A 59 ALA A 65 1 N GLY A 63 O ILE A 81 SHEET 3 AA1 7 SER A 30 VAL A 35 1 N ALA A 32 O LYS A 60 SHEET 4 AA1 7 HIS A 103 TYR A 106 1 O PHE A 105 N LEU A 33 SHEET 5 AA1 7 HIS A 138 GLN A 142 1 O CYS A 140 N ILE A 104 SHEET 6 AA1 7 THR A 195 PRO A 201 1 O SER A 197 N LEU A 141 SHEET 7 AA1 7 GLN A 270 CYS A 274 1 O LEU A 272 N VAL A 198 SHEET 1 AA2 2 VAL A 204 PHE A 205 0 SHEET 2 AA2 2 VAL A 249 ASP A 250 1 O VAL A 249 N PHE A 205 SHEET 1 AA3 2 LEU A 233 VAL A 234 0 SHEET 2 AA3 2 MET A 297 VAL A 298 1 O VAL A 298 N LEU A 233 SHEET 1 AA4 7 GLU B 79 GLN B 82 0 SHEET 2 AA4 7 TRP B 59 ALA B 65 1 N GLY B 63 O ILE B 81 SHEET 3 AA4 7 SER B 30 VAL B 35 1 N ALA B 32 O LYS B 60 SHEET 4 AA4 7 HIS B 103 TYR B 106 1 O PHE B 105 N LEU B 33 SHEET 5 AA4 7 HIS B 138 GLN B 142 1 O CYS B 140 N ILE B 104 SHEET 6 AA4 7 THR B 195 PRO B 201 1 O SER B 197 N LEU B 141 SHEET 7 AA4 7 GLN B 270 CYS B 274 1 O LEU B 272 N VAL B 198 SHEET 1 AA5 2 LEU B 203 PHE B 205 0 SHEET 2 AA5 2 ALA B 248 ASP B 250 1 O VAL B 249 N PHE B 205 SHEET 1 AA6 2 LEU B 233 VAL B 234 0 SHEET 2 AA6 2 MET B 297 VAL B 298 1 O VAL B 298 N LEU B 233 CISPEP 1 GLY A 57 PRO A 58 0 1.40 CISPEP 2 SER A 163 PRO A 164 0 1.59 CISPEP 3 GLY B 57 PRO B 58 0 -1.66 CISPEP 4 SER B 163 PRO B 164 0 -1.71 SITE 1 AC1 7 GLU A 113 LYS A 146 VAL A 174 ASN A 176 SITE 2 AC1 7 PHE A 177 TYR A 178 HOH A2109 SITE 1 AC2 3 THR A 38 ARG A 66 ARG A 67 SITE 1 AC3 4 CYS A 244 TYR A 245 CYS B 244 TYR B 245 SITE 1 AC4 5 THR B 38 ALA B 65 ARG B 66 ARG B 67 SITE 2 AC4 5 HOH B 618 SITE 1 AC5 7 ALA B 310 ALA B 338 ALA B 339 PHE B 340 SITE 2 AC5 7 TRP B 341 HOH B 503 HOH B 584 CRYST1 160.290 160.290 85.576 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006239 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006239 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011686 0.00000