HEADER HYDROLASE 22-JUL-15 5CR2 TITLE E. COLI MAZF IN COMPLEX WITH SINGLE STRAND DNA SUBSTRATE ANALOG COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDORIBONUCLEASE MAZF; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: TOXIN MAZF,MRNA INTERFERASE MAZF; COMPND 5 EC: 3.1.27.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SSDNA SUBSTRATE ANALOG; COMPND 9 CHAIN: D, E, F; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: MAZF, CHPA, CHPAK, B2782, JW2753; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE MS2; SOURCE 11 ORGANISM_TAXID: 329852 KEYWDS TOXIN-ANTITOXIN, MRNA INTERFERASE, RIBONUCLEASE, PERSISTENCE, KEYWDS 2 BACTERIAL STRESS RESPONSE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.ZORZINI,R.LORIS REVDAT 4 10-JAN-24 5CR2 1 REMARK REVDAT 3 08-JUN-16 5CR2 1 JRNL REVDAT 2 13-APR-16 5CR2 1 JRNL REVDAT 1 06-APR-16 5CR2 0 JRNL AUTH V.ZORZINI,A.MERNIK,J.LAH,Y.G.STERCKX,N.DE JONGE, JRNL AUTH 2 A.GARCIA-PINO,H.DE GREVE,W.VERSEES,R.LORIS JRNL TITL SUBSTRATE RECOGNITION AND ACTIVITY REGULATION OF THE JRNL TITL 2 ESCHERICHIA COLI MRNA ENDONUCLEASE MAZF. JRNL REF J.BIOL.CHEM. V. 291 10950 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27026704 JRNL DOI 10.1074/JBC.M116.715912 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 7461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.240 REMARK 3 FREE R VALUE TEST SET COUNT : 391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8127 - 4.1883 0.87 2390 126 0.2242 0.2660 REMARK 3 2 4.1883 - 3.3247 0.88 2339 123 0.2284 0.2962 REMARK 3 3 3.3247 - 2.9046 0.88 2340 124 0.2488 0.3378 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 32.26 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.98390 REMARK 3 B22 (A**2) : 3.98390 REMARK 3 B33 (A**2) : -12.93470 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2687 REMARK 3 ANGLE : 0.730 3676 REMARK 3 CHIRALITY : 0.049 420 REMARK 3 PLANARITY : 0.003 448 REMARK 3 DIHEDRAL : 14.912 991 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): 157.0664 21.2731 61.2651 REMARK 3 T TENSOR REMARK 3 T11: 0.1549 T22: 0.2652 REMARK 3 T33: 0.0141 T12: -0.0372 REMARK 3 T13: -0.0169 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 0.7228 L22: 0.6264 REMARK 3 L33: 0.6647 L12: 0.0210 REMARK 3 L13: 0.1649 L23: 0.4329 REMARK 3 S TENSOR REMARK 3 S11: 0.0920 S12: -0.1443 S13: -0.0762 REMARK 3 S21: 0.0962 S22: -0.0138 S23: 0.0033 REMARK 3 S31: -0.0239 S32: -0.1073 S33: -0.0202 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): 156.4705 21.8047 41.7447 REMARK 3 T TENSOR REMARK 3 T11: 0.1485 T22: 0.1835 REMARK 3 T33: 0.0436 T12: 0.0005 REMARK 3 T13: -0.0221 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.8487 L22: 1.9360 REMARK 3 L33: 1.3336 L12: 0.3179 REMARK 3 L13: -0.5648 L23: -0.0818 REMARK 3 S TENSOR REMARK 3 S11: -0.0204 S12: 0.0295 S13: -0.0890 REMARK 3 S21: -0.0022 S22: 0.0283 S23: 0.0956 REMARK 3 S31: 0.1148 S32: 0.0561 S33: -0.0336 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' REMARK 3 ORIGIN FOR THE GROUP (A): 131.9342 -0.2671 53.7438 REMARK 3 T TENSOR REMARK 3 T11: 0.0736 T22: 0.1205 REMARK 3 T33: 0.0144 T12: -0.0018 REMARK 3 T13: 0.0003 T23: 0.0544 REMARK 3 L TENSOR REMARK 3 L11: 1.3478 L22: 1.3976 REMARK 3 L33: 1.4041 L12: 0.2305 REMARK 3 L13: -0.1522 L23: -0.1663 REMARK 3 S TENSOR REMARK 3 S11: -0.0804 S12: 0.2326 S13: -0.0963 REMARK 3 S21: -0.1800 S22: -0.0433 S23: -0.0923 REMARK 3 S31: 0.0612 S32: -0.0385 S33: 0.0331 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' REMARK 3 ORIGIN FOR THE GROUP (A): 160.6118 6.3284 59.0794 REMARK 3 T TENSOR REMARK 3 T11: 0.2636 T22: 0.2286 REMARK 3 T33: 0.3711 T12: 0.0278 REMARK 3 T13: -0.0452 T23: -0.0555 REMARK 3 L TENSOR REMARK 3 L11: 8.2978 L22: 8.7544 REMARK 3 L33: 7.2500 L12: 5.0264 REMARK 3 L13: 5.9163 L23: -0.5768 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: 0.5200 S13: -0.0076 REMARK 3 S21: -0.5050 S22: -0.0284 S23: -0.4983 REMARK 3 S31: 0.0518 S32: 0.7233 S33: -0.4607 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' REMARK 3 ORIGIN FOR THE GROUP (A): 145.5417 22.1087 34.9737 REMARK 3 T TENSOR REMARK 3 T11: 0.7216 T22: 0.9911 REMARK 3 T33: 0.5672 T12: 0.1299 REMARK 3 T13: 0.1905 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 4.7052 L22: 8.6737 REMARK 3 L33: 5.0667 L12: 4.2773 REMARK 3 L13: -4.7513 L23: -5.4534 REMARK 3 S TENSOR REMARK 3 S11: -0.5693 S12: 1.5606 S13: -0.3598 REMARK 3 S21: -0.6391 S22: -0.1775 S23: 0.1914 REMARK 3 S31: -0.5104 S32: -0.2391 S33: 0.9437 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'F' REMARK 3 ORIGIN FOR THE GROUP (A): 140.7763 -8.1014 47.4153 REMARK 3 T TENSOR REMARK 3 T11: 1.1235 T22: 0.7856 REMARK 3 T33: 0.6251 T12: -0.1056 REMARK 3 T13: 0.4233 T23: -0.0700 REMARK 3 L TENSOR REMARK 3 L11: 3.6840 L22: 5.4698 REMARK 3 L33: 2.5330 L12: -3.7963 REMARK 3 L13: 2.0532 L23: -0.6450 REMARK 3 S TENSOR REMARK 3 S11: -0.0403 S12: -0.1361 S13: -0.0869 REMARK 3 S21: -0.1276 S22: -0.1306 S23: -0.1219 REMARK 3 S31: 0.6810 S32: 0.8955 S33: 0.0878 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CR2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7461 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 42.801 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 8.950 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.22400 REMARK 200 FOR THE DATA SET : 8.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.77800 REMARK 200 FOR SHELL : 2.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4MDX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M SODIUM ACETATE TRIHYDRATE, REMARK 280 0.085 M TRIS HYDROCLORIDE PH 8.5, 25.5% W/V PEG4000, 15% REMARK 280 GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 15.83667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.67333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.67333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 15.83667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 126.69333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 113 REMARK 465 HIS A 114 REMARK 465 HIS A 115 REMARK 465 HIS A 116 REMARK 465 HIS A 117 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 SER B 3 REMARK 465 HIS B 112 REMARK 465 HIS B 113 REMARK 465 HIS B 114 REMARK 465 HIS B 115 REMARK 465 HIS B 116 REMARK 465 HIS B 117 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 HIS C 113 REMARK 465 HIS C 114 REMARK 465 HIS C 115 REMARK 465 HIS C 116 REMARK 465 HIS C 117 REMARK 465 DC E 4 REMARK 465 DA E 5 REMARK 465 DU E 6 REMARK 465 DA E 7 REMARK 465 DC F 4 REMARK 465 DA F 5 REMARK 465 DU F 6 REMARK 465 DA F 7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 2 CG1 CG2 REMARK 470 ASP A 8 CG OD1 OD2 REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 MET A 38 CE REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 TYR A 58 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 65 OG REMARK 470 ARG B 4 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 70 CG OD1 OD2 REMARK 470 GLN B 100 CG CD OE1 NE2 REMARK 470 SER C 23 OG REMARK 470 GLN C 54 CG CD OE1 NE2 REMARK 470 GLN C 100 CG CD OE1 NE2 REMARK 470 DA D 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DA D 1 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA D 1 C2 N3 C4 REMARK 470 DA D 7 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DA D 7 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA D 7 C2 N3 C4 REMARK 470 DA E 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DA E 1 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 1 C2 N3 C4 REMARK 470 DA E 3 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DA E 3 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 3 C2 N3 C4 REMARK 470 DA F 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DA F 1 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA F 1 C2 N3 C4 REMARK 470 DA F 3 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DA F 3 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA F 3 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN C 41 NH2 ARG C 84 2.07 REMARK 500 OE1 GLN A 25 N4 DC D 4 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLN C 67 NZ LYS C 90 5556 2.18 REMARK 500 O HOH C 201 O HOH C 201 5556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO B 30 -174.00 -66.73 REMARK 500 REMARK 500 REMARK: NULL DBREF 5CR2 A 1 111 UNP P0AE70 MAZF_ECOLI 1 111 DBREF 5CR2 B 1 111 UNP P0AE70 MAZF_ECOLI 1 111 DBREF 5CR2 C 1 111 UNP P0AE70 MAZF_ECOLI 1 111 DBREF 5CR2 D 1 7 PDB 5CR2 5CR2 1 7 DBREF 5CR2 E 1 7 PDB 5CR2 5CR2 1 7 DBREF 5CR2 F 1 7 PDB 5CR2 5CR2 1 7 SEQADV 5CR2 HIS A 112 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS A 113 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS A 114 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS A 115 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS A 116 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS A 117 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS B 112 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS B 113 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS B 114 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS B 115 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS B 116 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS B 117 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS C 112 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS C 113 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS C 114 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS C 115 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS C 116 UNP P0AE70 EXPRESSION TAG SEQADV 5CR2 HIS C 117 UNP P0AE70 EXPRESSION TAG SEQRES 1 A 117 MET VAL SER ARG TYR VAL PRO ASP MET GLY ASP LEU ILE SEQRES 2 A 117 TRP VAL ASP PHE ASP PRO THR LYS GLY SER GLU GLN ALA SEQRES 3 A 117 GLY HIS ARG PRO ALA VAL VAL LEU SER PRO PHE MET TYR SEQRES 4 A 117 ASN ASN LYS THR GLY MET CYS LEU CYS VAL PRO CYS THR SEQRES 5 A 117 THR GLN SER LYS GLY TYR PRO PHE GLU VAL VAL LEU SER SEQRES 6 A 117 GLY GLN GLU ARG ASP GLY VAL ALA LEU ALA ASP GLN VAL SEQRES 7 A 117 LYS SER ILE ALA TRP ARG ALA ARG GLY ALA THR LYS LYS SEQRES 8 A 117 GLY THR VAL ALA PRO GLU GLU LEU GLN LEU ILE LYS ALA SEQRES 9 A 117 LYS ILE ASN VAL LEU ILE GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 117 MET VAL SER ARG TYR VAL PRO ASP MET GLY ASP LEU ILE SEQRES 2 B 117 TRP VAL ASP PHE ASP PRO THR LYS GLY SER GLU GLN ALA SEQRES 3 B 117 GLY HIS ARG PRO ALA VAL VAL LEU SER PRO PHE MET TYR SEQRES 4 B 117 ASN ASN LYS THR GLY MET CYS LEU CYS VAL PRO CYS THR SEQRES 5 B 117 THR GLN SER LYS GLY TYR PRO PHE GLU VAL VAL LEU SER SEQRES 6 B 117 GLY GLN GLU ARG ASP GLY VAL ALA LEU ALA ASP GLN VAL SEQRES 7 B 117 LYS SER ILE ALA TRP ARG ALA ARG GLY ALA THR LYS LYS SEQRES 8 B 117 GLY THR VAL ALA PRO GLU GLU LEU GLN LEU ILE LYS ALA SEQRES 9 B 117 LYS ILE ASN VAL LEU ILE GLY HIS HIS HIS HIS HIS HIS SEQRES 1 C 117 MET VAL SER ARG TYR VAL PRO ASP MET GLY ASP LEU ILE SEQRES 2 C 117 TRP VAL ASP PHE ASP PRO THR LYS GLY SER GLU GLN ALA SEQRES 3 C 117 GLY HIS ARG PRO ALA VAL VAL LEU SER PRO PHE MET TYR SEQRES 4 C 117 ASN ASN LYS THR GLY MET CYS LEU CYS VAL PRO CYS THR SEQRES 5 C 117 THR GLN SER LYS GLY TYR PRO PHE GLU VAL VAL LEU SER SEQRES 6 C 117 GLY GLN GLU ARG ASP GLY VAL ALA LEU ALA ASP GLN VAL SEQRES 7 C 117 LYS SER ILE ALA TRP ARG ALA ARG GLY ALA THR LYS LYS SEQRES 8 C 117 GLY THR VAL ALA PRO GLU GLU LEU GLN LEU ILE LYS ALA SEQRES 9 C 117 LYS ILE ASN VAL LEU ILE GLY HIS HIS HIS HIS HIS HIS SEQRES 1 D 7 DA DU DA DC DA DU DA SEQRES 1 E 7 DA DU DA DC DA DU DA SEQRES 1 F 7 DA DU DA DC DA DU DA FORMUL 7 HOH *31(H2 O) HELIX 1 AA1 PRO A 36 GLY A 44 1 9 HELIX 2 AA2 TRP A 83 GLY A 87 1 5 HELIX 3 AA3 ALA A 95 ILE A 110 1 16 HELIX 4 AA4 PRO B 36 GLY B 44 1 9 HELIX 5 AA5 TRP B 83 GLY B 87 1 5 HELIX 6 AA6 ALA B 95 ILE B 110 1 16 HELIX 7 AA7 PRO C 36 GLY C 44 1 9 HELIX 8 AA8 ALA C 95 ILE C 110 1 16 SHEET 1 AA1 4 GLU A 61 LEU A 64 0 SHEET 2 AA1 4 GLY A 71 LEU A 74 -1 O ALA A 73 N VAL A 62 SHEET 3 AA1 4 MET A 45 THR A 52 -1 N THR A 52 O VAL A 72 SHEET 4 AA1 4 LYS A 79 ALA A 82 -1 O LYS A 79 N CYS A 48 SHEET 1 AA2 6 GLU A 61 LEU A 64 0 SHEET 2 AA2 6 GLY A 71 LEU A 74 -1 O ALA A 73 N VAL A 62 SHEET 3 AA2 6 MET A 45 THR A 52 -1 N THR A 52 O VAL A 72 SHEET 4 AA2 6 HIS A 28 VAL A 33 -1 N PRO A 30 O CYS A 51 SHEET 5 AA2 6 ASP A 11 ASP A 16 -1 N ILE A 13 O ALA A 31 SHEET 6 AA2 6 THR A 89 THR A 93 -1 O LYS A 91 N LEU A 12 SHEET 1 AA3 3 HIS B 28 ARG B 29 0 SHEET 2 AA3 3 ASP B 11 ASP B 16 -1 N VAL B 15 O ARG B 29 SHEET 3 AA3 3 THR B 89 THR B 93 -1 O THR B 89 N TRP B 14 SHEET 1 AA4 4 ALA B 31 VAL B 33 0 SHEET 2 AA4 4 MET B 45 THR B 52 -1 O VAL B 49 N VAL B 32 SHEET 3 AA4 4 VAL B 72 LEU B 74 -1 O VAL B 72 N THR B 52 SHEET 4 AA4 4 GLU B 61 VAL B 63 -1 N VAL B 62 O ALA B 73 SHEET 1 AA5 3 ALA B 31 VAL B 33 0 SHEET 2 AA5 3 MET B 45 THR B 52 -1 O VAL B 49 N VAL B 32 SHEET 3 AA5 3 LYS B 79 ALA B 82 -1 O LYS B 79 N CYS B 48 SHEET 1 AA6 4 GLU C 61 VAL C 63 0 SHEET 2 AA6 4 VAL C 72 LEU C 74 -1 O ALA C 73 N VAL C 62 SHEET 3 AA6 4 MET C 45 THR C 52 -1 N THR C 52 O VAL C 72 SHEET 4 AA6 4 LYS C 79 ALA C 82 -1 O LYS C 79 N CYS C 48 SHEET 1 AA7 6 GLU C 61 VAL C 63 0 SHEET 2 AA7 6 VAL C 72 LEU C 74 -1 O ALA C 73 N VAL C 62 SHEET 3 AA7 6 MET C 45 THR C 52 -1 N THR C 52 O VAL C 72 SHEET 4 AA7 6 HIS C 28 VAL C 33 -1 N PRO C 30 O CYS C 51 SHEET 5 AA7 6 ASP C 11 ASP C 16 -1 N ILE C 13 O ALA C 31 SHEET 6 AA7 6 THR C 89 THR C 93 -1 O THR C 89 N TRP C 14 CISPEP 1 ASP A 18 PRO A 19 0 1.22 CISPEP 2 ASP B 18 PRO B 19 0 -5.81 CISPEP 3 ASP C 18 PRO C 19 0 -0.15 CRYST1 113.960 113.960 47.510 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008775 0.005066 0.000000 0.00000 SCALE2 0.000000 0.010133 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021048 0.00000