HEADER TRANSFERASE 27-JUL-15 5CVV TITLE CONIFERYL ALCOHOL BOUND MONOLIGNOL 4-O-METHYLTRANSFERASE 9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: (ISO)EUGENOL O-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: S-ADENOSYSL-L-METHIONINE:(ISO)EUGENOL O-METHYLTRANSFERASE, COMPND 5 IEMT; COMPND 6 EC: 2.1.1.146; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLARKIA BREWERI; SOURCE 3 ORGANISM_COMMON: FAIRY FANS; SOURCE 4 ORGANISM_TAXID: 36903; SOURCE 5 GENE: IEMT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MONOLIGNOL-4-O METHYLTRANSFERASE, LIGNIN, CONIFERYL ALCOHOL, S- KEYWDS 2 ADENOSYLMETHIONINE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.CAI,C.-J.LIU REVDAT 4 06-MAR-24 5CVV 1 REMARK REVDAT 3 04-DEC-19 5CVV 1 REMARK REVDAT 2 20-SEP-17 5CVV 1 REMARK REVDAT 1 16-SEP-15 5CVV 0 JRNL AUTH Y.CAI,C.-J.LIU JRNL TITL STRUCTURE OF CONIFERYL ALCOHOL BOUND MONOLIGNOL JRNL TITL 2 4-O-METHYLTRANSFERASE 9 AT 1.73 ANGSTROMS RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 66671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3541 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4891 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 254 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5375 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 273 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.90000 REMARK 3 B22 (A**2) : -0.44000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.69000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.348 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5570 ; 0.024 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5346 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7570 ; 2.250 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12349 ; 1.160 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 695 ; 6.619 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 213 ;37.207 ;24.554 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 911 ;15.469 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.970 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 857 ; 0.146 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6185 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1185 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2798 ; 3.083 ; 2.589 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2797 ; 3.083 ; 2.588 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3487 ; 4.168 ; 3.862 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3488 ; 4.168 ; 3.862 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2772 ; 4.087 ; 2.988 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2773 ; 4.087 ; 2.989 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4084 ; 5.931 ; 4.318 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6486 ; 7.313 ;21.350 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6399 ; 7.300 ;21.233 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5CVV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212264. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70249 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 73.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.840 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOMT9 WAS GROWN VIA A HANGING-DROP REMARK 280 VAPOR DIFFUSION METHOD IN 22% (W/V) PEG 4000, 0.3 M MG(NO3)2 (PH REMARK 280 7.2), AND 1 MM DTT WITH 1 MM SAH AND 1 MM CONIFERYL ALCOHOL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.74000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 GLY A 5 REMARK 465 ASN A 6 REMARK 465 ALA A 7 REMARK 465 GLU A 8 REMARK 465 ILE A 9 REMARK 465 GLN A 10 REMARK 465 ILE A 11 REMARK 465 ILE A 12 REMARK 465 PRO A 13 REMARK 465 THR A 14 REMARK 465 HIS A 15 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 THR B 4 REMARK 465 GLY B 5 REMARK 465 ASN B 6 REMARK 465 ALA B 7 REMARK 465 GLU B 8 REMARK 465 ILE B 9 REMARK 465 GLN B 10 REMARK 465 ILE B 11 REMARK 465 ILE B 12 REMARK 465 PRO B 13 REMARK 465 THR B 14 REMARK 465 HIS B 15 REMARK 465 GLU B 99 REMARK 465 LEU B 100 REMARK 465 PRO B 101 REMARK 465 SER B 102 REMARK 465 GLY B 103 REMARK 465 LYS B 104 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 104 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 64 O HOH B 501 1.85 REMARK 500 ND1 HIS A 278 O HOH A 501 2.00 REMARK 500 OD1 ASP A 18 NZ LYS B 116 2.16 REMARK 500 OD1 ASN A 164 O HOH A 502 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 152 CD GLU A 152 OE1 0.069 REMARK 500 GLU B 19 CD GLU B 19 OE1 0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 71 N - CA - C ANGL. DEV. = 17.9 DEGREES REMARK 500 ASP A 81 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 MET A 191 CG - SD - CE ANGL. DEV. = 13.8 DEGREES REMARK 500 TYR A 301 CB - CG - CD1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ASP B 81 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 LEU B 140 CB - CG - CD2 ANGL. DEV. = 10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 55 -169.27 -70.59 REMARK 500 PRO A 70 59.02 -68.59 REMARK 500 THR A 71 -62.82 -93.47 REMARK 500 SER A 102 53.64 -62.82 REMARK 500 LYS A 104 -22.23 172.24 REMARK 500 VAL A 105 130.85 63.39 REMARK 500 ASN B 121 -158.86 -90.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 16 SER A 17 146.58 REMARK 500 THR A 71 THR A 72 -42.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue N7I A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CVJ RELATED DB: PDB REMARK 900 RELATED ID: 5CVU RELATED DB: PDB DBREF 5CVV A 1 368 UNP O04385 IEMT_CLABR 1 368 DBREF 5CVV B 1 368 UNP O04385 IEMT_CLABR 1 368 SEQADV 5CVV HIS A 26 UNP O04385 MET 26 ENGINEERED MUTATION SEQADV 5CVV ARG A 30 UNP O04385 SER 30 ENGINEERED MUTATION SEQADV 5CVV SER A 33 UNP O04385 VAL 33 ENGINEERED MUTATION SEQADV 5CVV LEU A 133 UNP O04385 THR 133 ENGINEERED MUTATION SEQADV 5CVV ILE A 165 UNP O04385 GLU 165 ENGINEERED MUTATION SEQADV 5CVV TRP A 166 UNP O04385 PHE 166 ENGINEERED MUTATION SEQADV 5CVV PHE A 169 UNP O04385 HIS 169 ENGINEERED MUTATION SEQADV 5CVV ILE A 175 UNP O04385 PHE 175 ENGINEERED MUTATION SEQADV 5CVV MET A 319 UNP O04385 THR 319 ENGINEERED MUTATION SEQADV 5CVV HIS B 26 UNP O04385 MET 26 ENGINEERED MUTATION SEQADV 5CVV ARG B 30 UNP O04385 SER 30 ENGINEERED MUTATION SEQADV 5CVV SER B 33 UNP O04385 VAL 33 ENGINEERED MUTATION SEQADV 5CVV LEU B 133 UNP O04385 THR 133 ENGINEERED MUTATION SEQADV 5CVV ILE B 165 UNP O04385 GLU 165 ENGINEERED MUTATION SEQADV 5CVV TRP B 166 UNP O04385 PHE 166 ENGINEERED MUTATION SEQADV 5CVV PHE B 169 UNP O04385 HIS 169 ENGINEERED MUTATION SEQADV 5CVV ILE B 175 UNP O04385 PHE 175 ENGINEERED MUTATION SEQADV 5CVV MET B 319 UNP O04385 THR 319 ENGINEERED MUTATION SEQRES 1 A 368 MET GLY SER THR GLY ASN ALA GLU ILE GLN ILE ILE PRO SEQRES 2 A 368 THR HIS SER SER ASP GLU GLU ALA ASN LEU PHE ALA HIS SEQRES 3 A 368 GLN LEU ALA ARG ALA ALA SER LEU PRO MET ALA LEU LYS SEQRES 4 A 368 ALA ALA ILE GLU LEU ASP VAL LEU GLU ILE MET ALA LYS SEQRES 5 A 368 SER VAL PRO PRO SER GLY TYR ILE SER PRO ALA GLU ILE SEQRES 6 A 368 ALA ALA GLN LEU PRO THR THR ASN PRO GLU ALA PRO VAL SEQRES 7 A 368 MET LEU ASP ARG VAL LEU ARG LEU LEU ALA SER TYR SER SEQRES 8 A 368 VAL VAL THR TYR THR LEU ARG GLU LEU PRO SER GLY LYS SEQRES 9 A 368 VAL GLU ARG LEU TYR GLY LEU ALA PRO VAL CYS LYS PHE SEQRES 10 A 368 LEU THR LYS ASN GLU ASP GLY VAL SER LEU ALA PRO PHE SEQRES 11 A 368 LEU LEU LEU ALA THR ASP LYS VAL LEU LEU GLU PRO TRP SEQRES 12 A 368 PHE TYR LEU LYS ASP ALA ILE LEU GLU GLY GLY ILE PRO SEQRES 13 A 368 PHE ASN LYS ALA TYR GLY MET ASN ILE TRP ASP TYR PHE SEQRES 14 A 368 GLY THR ASP HIS ARG ILE ASN LYS VAL PHE ASN LYS GLY SEQRES 15 A 368 MET SER SER ASN SER THR ILE THR MET LYS LYS ILE LEU SEQRES 16 A 368 GLU MET TYR ASN GLY PHE GLU GLY LEU THR THR ILE VAL SEQRES 17 A 368 ASP VAL GLY GLY GLY THR GLY ALA VAL ALA SER MET ILE SEQRES 18 A 368 VAL ALA LYS TYR PRO SER ILE ASN ALA ILE ASN PHE ASP SEQRES 19 A 368 LEU PRO HIS VAL ILE GLN ASP ALA PRO ALA PHE SER GLY SEQRES 20 A 368 VAL GLU HIS LEU GLY GLY ASP MET PHE ASP GLY VAL PRO SEQRES 21 A 368 LYS GLY ASP ALA ILE PHE ILE LYS TRP ILE CYS HIS ASP SEQRES 22 A 368 TRP SER ASP GLU HIS CYS LEU LYS LEU LEU LYS ASN CYS SEQRES 23 A 368 TYR ALA ALA LEU PRO ASP HIS GLY LYS VAL ILE VAL ALA SEQRES 24 A 368 GLU TYR ILE LEU PRO PRO SER PRO ASP PRO SER ILE ALA SEQRES 25 A 368 THR LYS VAL VAL ILE HIS MET ASP ALA LEU MET LEU ALA SEQRES 26 A 368 TYR ASN PRO GLY GLY LYS GLU ARG THR GLU LYS GLU PHE SEQRES 27 A 368 GLN ALA LEU ALA MET ALA SER GLY PHE ARG GLY PHE LYS SEQRES 28 A 368 VAL ALA SER CYS ALA PHE ASN THR TYR VAL MET GLU PHE SEQRES 29 A 368 LEU LYS THR ALA SEQRES 1 B 368 MET GLY SER THR GLY ASN ALA GLU ILE GLN ILE ILE PRO SEQRES 2 B 368 THR HIS SER SER ASP GLU GLU ALA ASN LEU PHE ALA HIS SEQRES 3 B 368 GLN LEU ALA ARG ALA ALA SER LEU PRO MET ALA LEU LYS SEQRES 4 B 368 ALA ALA ILE GLU LEU ASP VAL LEU GLU ILE MET ALA LYS SEQRES 5 B 368 SER VAL PRO PRO SER GLY TYR ILE SER PRO ALA GLU ILE SEQRES 6 B 368 ALA ALA GLN LEU PRO THR THR ASN PRO GLU ALA PRO VAL SEQRES 7 B 368 MET LEU ASP ARG VAL LEU ARG LEU LEU ALA SER TYR SER SEQRES 8 B 368 VAL VAL THR TYR THR LEU ARG GLU LEU PRO SER GLY LYS SEQRES 9 B 368 VAL GLU ARG LEU TYR GLY LEU ALA PRO VAL CYS LYS PHE SEQRES 10 B 368 LEU THR LYS ASN GLU ASP GLY VAL SER LEU ALA PRO PHE SEQRES 11 B 368 LEU LEU LEU ALA THR ASP LYS VAL LEU LEU GLU PRO TRP SEQRES 12 B 368 PHE TYR LEU LYS ASP ALA ILE LEU GLU GLY GLY ILE PRO SEQRES 13 B 368 PHE ASN LYS ALA TYR GLY MET ASN ILE TRP ASP TYR PHE SEQRES 14 B 368 GLY THR ASP HIS ARG ILE ASN LYS VAL PHE ASN LYS GLY SEQRES 15 B 368 MET SER SER ASN SER THR ILE THR MET LYS LYS ILE LEU SEQRES 16 B 368 GLU MET TYR ASN GLY PHE GLU GLY LEU THR THR ILE VAL SEQRES 17 B 368 ASP VAL GLY GLY GLY THR GLY ALA VAL ALA SER MET ILE SEQRES 18 B 368 VAL ALA LYS TYR PRO SER ILE ASN ALA ILE ASN PHE ASP SEQRES 19 B 368 LEU PRO HIS VAL ILE GLN ASP ALA PRO ALA PHE SER GLY SEQRES 20 B 368 VAL GLU HIS LEU GLY GLY ASP MET PHE ASP GLY VAL PRO SEQRES 21 B 368 LYS GLY ASP ALA ILE PHE ILE LYS TRP ILE CYS HIS ASP SEQRES 22 B 368 TRP SER ASP GLU HIS CYS LEU LYS LEU LEU LYS ASN CYS SEQRES 23 B 368 TYR ALA ALA LEU PRO ASP HIS GLY LYS VAL ILE VAL ALA SEQRES 24 B 368 GLU TYR ILE LEU PRO PRO SER PRO ASP PRO SER ILE ALA SEQRES 25 B 368 THR LYS VAL VAL ILE HIS MET ASP ALA LEU MET LEU ALA SEQRES 26 B 368 TYR ASN PRO GLY GLY LYS GLU ARG THR GLU LYS GLU PHE SEQRES 27 B 368 GLN ALA LEU ALA MET ALA SER GLY PHE ARG GLY PHE LYS SEQRES 28 B 368 VAL ALA SER CYS ALA PHE ASN THR TYR VAL MET GLU PHE SEQRES 29 B 368 LEU LYS THR ALA HET SAH A 401 26 HET N7I A 402 13 HET SAH B 401 26 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM N7I 4-[(1E)-3-HYDROXYPROP-1-EN-1-YL]-2-METHOXYPHENOL HETSYN N7I CONIFERYL ALCOHOL FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 4 N7I C10 H12 O3 FORMUL 6 HOH *273(H2 O) HELIX 1 AA1 SER A 16 ALA A 31 1 16 HELIX 2 AA2 ALA A 32 LEU A 44 1 13 HELIX 3 AA3 ASP A 45 VAL A 54 1 10 HELIX 4 AA4 SER A 61 ALA A 67 1 7 HELIX 5 AA5 GLU A 75 TYR A 90 1 16 HELIX 6 AA6 PRO A 113 LEU A 118 5 6 HELIX 7 AA7 LEU A 127 THR A 135 1 9 HELIX 8 AA8 ASP A 136 GLU A 141 1 6 HELIX 9 AA9 PRO A 142 PHE A 144 5 3 HELIX 10 AB1 TYR A 145 GLY A 153 1 9 HELIX 11 AB2 ILE A 155 GLY A 162 1 8 HELIX 12 AB3 ASN A 164 GLY A 170 1 7 HELIX 13 AB4 ASP A 172 TYR A 198 1 27 HELIX 14 AB5 GLY A 215 TYR A 225 1 11 HELIX 15 AB6 LEU A 235 GLN A 240 1 6 HELIX 16 AB7 ILE A 270 TRP A 274 5 5 HELIX 17 AB8 SER A 275 LEU A 290 1 16 HELIX 18 AB9 SER A 310 ASN A 327 1 18 HELIX 19 AC1 THR A 334 SER A 345 1 12 HELIX 20 AC2 SER B 17 ALA B 31 1 15 HELIX 21 AC3 ALA B 32 LEU B 44 1 13 HELIX 22 AC4 ASP B 45 VAL B 54 1 10 HELIX 23 AC5 SER B 61 ALA B 67 1 7 HELIX 24 AC6 GLU B 75 TYR B 90 1 16 HELIX 25 AC7 PRO B 113 LEU B 118 5 6 HELIX 26 AC8 LEU B 127 THR B 135 1 9 HELIX 27 AC9 ASP B 136 GLU B 141 1 6 HELIX 28 AD1 PRO B 142 PHE B 144 5 3 HELIX 29 AD2 TYR B 145 GLY B 153 1 9 HELIX 30 AD3 ILE B 155 GLY B 162 1 8 HELIX 31 AD4 ASN B 164 ASP B 172 1 9 HELIX 32 AD5 ASP B 172 TYR B 198 1 27 HELIX 33 AD6 GLY B 215 TYR B 225 1 11 HELIX 34 AD7 LEU B 235 GLN B 240 1 6 HELIX 35 AD8 ILE B 270 TRP B 274 5 5 HELIX 36 AD9 SER B 275 LEU B 290 1 16 HELIX 37 AE1 SER B 310 ASN B 327 1 18 HELIX 38 AE2 THR B 334 SER B 345 1 12 SHEET 1 AA1 2 VAL A 93 ARG A 98 0 SHEET 2 AA1 2 GLU A 106 LEU A 111 -1 O LEU A 108 N THR A 96 SHEET 1 AA2 7 VAL A 248 GLY A 252 0 SHEET 2 AA2 7 ASN A 229 ASP A 234 1 N ASN A 232 O GLU A 249 SHEET 3 AA2 7 THR A 206 VAL A 210 1 N ASP A 209 O ILE A 231 SHEET 4 AA2 7 ALA A 264 LYS A 268 1 O PHE A 266 N VAL A 208 SHEET 5 AA2 7 LYS A 295 GLU A 300 1 O ILE A 297 N ILE A 265 SHEET 6 AA2 7 THR A 359 LEU A 365 -1 O MET A 362 N VAL A 298 SHEET 7 AA2 7 GLY A 349 ALA A 356 -1 N SER A 354 O VAL A 361 SHEET 1 AA3 2 VAL B 93 LEU B 97 0 SHEET 2 AA3 2 ARG B 107 LEU B 111 -1 O GLY B 110 N THR B 94 SHEET 1 AA4 7 VAL B 248 GLY B 252 0 SHEET 2 AA4 7 ASN B 229 ASP B 234 1 N ALA B 230 O GLU B 249 SHEET 3 AA4 7 THR B 206 VAL B 210 1 N ASP B 209 O PHE B 233 SHEET 4 AA4 7 ALA B 264 LYS B 268 1 O PHE B 266 N VAL B 208 SHEET 5 AA4 7 LYS B 295 GLU B 300 1 O ILE B 297 N ILE B 265 SHEET 6 AA4 7 THR B 359 LEU B 365 -1 O MET B 362 N VAL B 298 SHEET 7 AA4 7 GLY B 349 ALA B 356 -1 N GLY B 349 O LEU B 365 SITE 1 AC1 20 TRP A 166 MET A 183 SER A 187 GLY A 211 SITE 2 AC1 20 ASP A 234 LEU A 235 VAL A 238 ASP A 254 SITE 3 AC1 20 MET A 255 PHE A 256 LYS A 268 ASP A 273 SITE 4 AC1 20 N7I A 402 HOH A 505 HOH A 512 HOH A 516 SITE 5 AC1 20 HOH A 577 HOH A 578 HOH A 587 HOH A 596 SITE 1 AC2 11 LEU A 133 LEU A 139 TRP A 166 MET A 183 SITE 2 AC2 11 TRP A 269 HIS A 272 ASP A 273 MET A 323 SITE 3 AC2 11 ASN A 327 SAH A 401 ARG B 30 SITE 1 AC3 18 MET B 183 SER B 187 GLY B 211 ASP B 234 SITE 2 AC3 18 LEU B 235 VAL B 238 ASP B 254 MET B 255 SITE 3 AC3 18 PHE B 256 LYS B 268 ILE B 270 ASP B 273 SITE 4 AC3 18 HOH B 509 HOH B 512 HOH B 565 HOH B 580 SITE 5 AC3 18 HOH B 583 HOH B 585 CRYST1 68.290 67.480 74.070 90.00 93.18 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014643 0.000000 0.000814 0.00000 SCALE2 0.000000 0.014819 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013522 0.00000