data_5CVZ # _entry.id 5CVZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5CVZ pdb_00005cvz 10.2210/pdb5cvz/pdb WWPDB D_1000212076 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '1STM contains the same protein crystallized in a different space group' 1STM unspecified PDB . 5CW0 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5CVZ _pdbx_database_status.recvd_initial_deposition_date 2015-07-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Makino, D.L.' 1 'Day, J.' 2 'Larson, S.B.' 3 'McPherson, A.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Virology _citation.journal_id_ASTM VIRLAX _citation.journal_id_CSD 0922 _citation.journal_id_ISSN 0042-6822 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 351 _citation.language ? _citation.page_first 420 _citation.page_last 431 _citation.title 'Investigation of RNA structure in satellite panicum mosaic virus.' _citation.year 2006 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.virol.2006.03.028 _citation.pdbx_database_id_PubMed 16677679 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Makino, D.L.' 1 ? primary 'Day, J.' 2 ? primary 'Larson, S.B.' 3 ? primary 'McPherson, A.' 4 ? # _cell.entry_id 5CVZ _cell.length_a 226.350 _cell.length_b 226.350 _cell.length_c 226.350 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 240 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5CVZ _symmetry.space_group_name_H-M 'P 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Coat protein' _entity.formula_weight 15107.958 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SPMV capsid protein' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Capsid protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AAATSLVYDTCYVTLTERATTSFQRQSFPTLKGMGDRAFQVVAFTIQGVSAAPLMYNARLYNPGDTDSVHATGVQLMGTV PRTVRLTPRVGQNNWFFGNTEEAETILAIDGLVSTKGANAPSNTVIVTGCFRLAPSELQSS ; _entity_poly.pdbx_seq_one_letter_code_can ;AAATSLVYDTCYVTLTERATTSFQRQSFPTLKGMGDRAFQVVAFTIQGVSAAPLMYNARLYNPGDTDSVHATGVQLMGTV PRTVRLTPRVGQNNWFFGNTEEAETILAIDGLVSTKGANAPSNTVIVTGCFRLAPSELQSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 ALA n 1 4 THR n 1 5 SER n 1 6 LEU n 1 7 VAL n 1 8 TYR n 1 9 ASP n 1 10 THR n 1 11 CYS n 1 12 TYR n 1 13 VAL n 1 14 THR n 1 15 LEU n 1 16 THR n 1 17 GLU n 1 18 ARG n 1 19 ALA n 1 20 THR n 1 21 THR n 1 22 SER n 1 23 PHE n 1 24 GLN n 1 25 ARG n 1 26 GLN n 1 27 SER n 1 28 PHE n 1 29 PRO n 1 30 THR n 1 31 LEU n 1 32 LYS n 1 33 GLY n 1 34 MET n 1 35 GLY n 1 36 ASP n 1 37 ARG n 1 38 ALA n 1 39 PHE n 1 40 GLN n 1 41 VAL n 1 42 VAL n 1 43 ALA n 1 44 PHE n 1 45 THR n 1 46 ILE n 1 47 GLN n 1 48 GLY n 1 49 VAL n 1 50 SER n 1 51 ALA n 1 52 ALA n 1 53 PRO n 1 54 LEU n 1 55 MET n 1 56 TYR n 1 57 ASN n 1 58 ALA n 1 59 ARG n 1 60 LEU n 1 61 TYR n 1 62 ASN n 1 63 PRO n 1 64 GLY n 1 65 ASP n 1 66 THR n 1 67 ASP n 1 68 SER n 1 69 VAL n 1 70 HIS n 1 71 ALA n 1 72 THR n 1 73 GLY n 1 74 VAL n 1 75 GLN n 1 76 LEU n 1 77 MET n 1 78 GLY n 1 79 THR n 1 80 VAL n 1 81 PRO n 1 82 ARG n 1 83 THR n 1 84 VAL n 1 85 ARG n 1 86 LEU n 1 87 THR n 1 88 PRO n 1 89 ARG n 1 90 VAL n 1 91 GLY n 1 92 GLN n 1 93 ASN n 1 94 ASN n 1 95 TRP n 1 96 PHE n 1 97 PHE n 1 98 GLY n 1 99 ASN n 1 100 THR n 1 101 GLU n 1 102 GLU n 1 103 ALA n 1 104 GLU n 1 105 THR n 1 106 ILE n 1 107 LEU n 1 108 ALA n 1 109 ILE n 1 110 ASP n 1 111 GLY n 1 112 LEU n 1 113 VAL n 1 114 SER n 1 115 THR n 1 116 LYS n 1 117 GLY n 1 118 ALA n 1 119 ASN n 1 120 ALA n 1 121 PRO n 1 122 SER n 1 123 ASN n 1 124 THR n 1 125 VAL n 1 126 ILE n 1 127 VAL n 1 128 THR n 1 129 GLY n 1 130 CYS n 1 131 PHE n 1 132 ARG n 1 133 LEU n 1 134 ALA n 1 135 PRO n 1 136 SER n 1 137 GLU n 1 138 LEU n 1 139 GLN n 1 140 SER n 1 141 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 141 _entity_src_nat.common_name SPMV _entity_src_nat.pdbx_organism_scientific 'Panicum mosaic satellite virus' _entity_src_nat.pdbx_ncbi_taxonomy_id 154834 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue 'white perl millet leaves' _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details 'SPMV infected white perl millet leaves' _entity_src_nat.details 'SPMV infected white perl millet leaves' # _struct_ref.db_code COAT_SPMV _struct_ref.db_name UNP _struct_ref.details ? _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.seq_align ? _struct_ref.seq_dif ? _struct_ref.pdbx_db_accession Q86993 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ;AAATSLVYDTCYVTLTERATTSFQRQSFPTLKGMGDRAFQVVAFTIQGVSAAPLMYNARLYNPGDTDSVHATGVQLMGTV PRTVRLTPRVGQNNWFFGNTEEAETILAIDGLVSTKGANAPSNTVIVTGCFRLAPSELQSS ; _struct_ref.pdbx_align_begin 17 _struct_ref.pdbx_align_end ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5CVZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 141 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q86993 _struct_ref_seq.db_align_beg 17 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 157 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 17 _struct_ref_seq.pdbx_auth_seq_align_end 157 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5CVZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ;Matthews' coeficient and solvent content include correction for disordered RNA ; _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '6%-14% PEG 3350, pH 5.0-7.0. Gluteraldehyde-treated before freezing' _exptl_crystal_grow.pdbx_pH_range 5.0-7.0 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2002-02 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5CVZ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.000 _reflns.d_resolution_high 3.300 _reflns.number_obs 58624 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.12300 _reflns.pdbx_netI_over_sigmaI 27.7250 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 17.20 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.30 _reflns_shell.d_res_low 3.36 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.44000 _reflns_shell.meanI_over_sigI_obs 6.480 _reflns_shell.pdbx_redundancy 13.00 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5CVZ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 50688 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 3.30 _refine.ls_percent_reflns_obs 87.6 _refine.ls_R_factor_obs 0.230 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.230 _refine.ls_R_factor_R_free 0.231 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.900 _refine.ls_number_reflns_R_free 5164 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 67.21 _refine.aniso_B[1][1] 0.00000 _refine.aniso_B[2][2] 0.00000 _refine.aniso_B[3][3] 0.00000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 45.45 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1STM _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values RESIDUAL _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1061 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1061 _refine_hist.d_res_high 3.30 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.549 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.026 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.805 ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.859 ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.041 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 3.30 _refine_ls_shell.d_res_low 3.42 _refine_ls_shell.number_reflns_R_work 3660 _refine_ls_shell.R_factor_R_work 0.2922 _refine_ls_shell.percent_reflns_obs 70.70 _refine_ls_shell.R_factor_R_free 0.2971 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 352 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file CNS_TOPPAR:PROTEIN_REP.PARAM _pdbx_xplor_file.topol_file CNS_TOPPAR:PROTEIN.TOP # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 generate ? 0.935851 0.352379 -0.003547 -0.120857 0.330396 0.936073 0.331024 -0.875596 0.351788 -0.84800 -0.43380 3.55330 3 generate ? 0.832054 0.449305 0.325287 0.156828 -0.753048 0.639002 0.532064 -0.480670 -0.697040 -1.80720 2.85150 4.90240 4 generate ? 0.832053 0.156827 0.532064 0.449305 -0.753047 -0.480671 0.325288 0.639003 -0.697039 -1.55190 5.31570 2.18280 5 generate ? 0.935850 -0.120858 0.331026 0.352381 0.330396 -0.875595 -0.003547 0.936072 0.351789 -0.43500 3.55330 -0.84690 6 generate ? 0.356452 -0.497822 0.790642 -0.497821 -0.817298 -0.290169 0.790643 -0.290167 -0.539154 1.04490 7.76120 3.09420 7 generate ? 0.655474 -0.731155 -0.189122 -0.463163 -0.191385 -0.865362 0.596519 0.654817 -0.464091 3.76790 7.50690 0.63390 8 generate ? 0.639188 0.155001 -0.753268 -0.696776 0.531266 -0.481933 0.325486 0.832905 0.447580 2.85700 4.90780 -1.80520 9 generate ? 0.330100 0.936007 -0.122166 -0.875818 0.351975 0.330237 0.352104 -0.002016 0.935959 -0.42880 3.55580 -0.85210 10 generate ? 0.155361 0.532542 0.832023 -0.752856 -0.481483 0.448755 0.639586 -0.696112 0.326124 -1.54890 5.31920 2.17580 11 generate ? -0.102159 -0.990263 0.094569 -0.990263 0.092198 -0.104303 0.094569 -0.104304 -0.990039 5.95160 5.96510 5.95740 12 generate ? 0.055380 -0.445981 -0.893327 -0.972408 -0.227159 0.053123 -0.226619 0.865737 -0.446255 6.80380 6.39420 2.40450 13 generate ? -0.189987 0.654359 -0.731929 -0.864989 -0.464224 -0.190500 -0.464434 0.596918 0.654209 3.77610 7.50620 0.63540 14 generate ? -0.499170 0.790123 0.355717 -0.816455 -0.291380 -0.498496 -0.290224 -0.539261 0.790549 1.05260 7.76430 3.09500 15 generate ? -0.444890 -0.226308 0.866521 -0.893879 0.052507 -0.445223 0.055259 -0.972640 -0.225651 2.39710 6.81180 6.38400 16 generate ? 0.531329 0.832757 0.155584 -0.481346 0.447885 -0.753462 -0.697134 0.325446 0.638818 -1.54810 5.32330 2.18330 17 generate ? 0.448103 0.326141 0.832368 -0.754013 0.638091 0.155902 -0.480280 -0.697476 0.531844 -1.80720 2.85980 4.90300 18 generate ? 0.655473 -0.463163 0.596519 -0.731155 -0.191385 0.654816 -0.189121 -0.865362 -0.464092 0.62910 3.77660 7.50280 19 generate ? 0.866865 -0.444360 -0.226028 -0.444360 -0.894231 0.053799 -0.226028 0.053801 -0.972634 2.39370 6.80640 6.38950 20 generate ? 0.790140 0.356562 -0.498541 -0.289970 -0.499140 -0.816564 -0.539997 0.789762 -0.290998 1.04810 7.76230 3.10180 # _struct.entry_id 5CVZ _struct.title 'Investigation of RNA structure in satellite panicum mosaic virus - glutaraldehyde treated' _struct.pdbx_model_details 'SPMV capsid protein' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5CVZ _struct_keywords.text 'capsid protein, satellite virus, glutaraldehyde cross-linked, VIRUS' _struct_keywords.pdbx_keywords VIRUS # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id PHE _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 28 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id MET _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 34 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PHE _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 44 _struct_conf.end_auth_comp_id MET _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 50 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 5 ? VAL A 13 ? SER A 21 VAL A 29 AA1 2 ASN A 123 ? LEU A 133 ? ASN A 139 LEU A 149 AA1 3 PHE A 39 ? SER A 50 ? PHE A 55 SER A 66 AA1 4 ARG A 82 ? LEU A 86 ? ARG A 98 LEU A 102 AA2 1 THR A 20 ? GLN A 24 ? THR A 36 GLN A 40 AA2 2 THR A 105 ? LEU A 112 ? THR A 121 LEU A 128 AA2 3 MET A 55 ? LEU A 60 ? MET A 71 LEU A 76 AA2 4 HIS A 70 ? ALA A 71 ? HIS A 86 ALA A 87 AA3 1 THR A 20 ? GLN A 24 ? THR A 36 GLN A 40 AA3 2 THR A 105 ? LEU A 112 ? THR A 121 LEU A 128 AA3 3 MET A 55 ? LEU A 60 ? MET A 71 LEU A 76 AA3 4 GLN A 75 ? LEU A 76 ? GLN A 91 LEU A 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 7 ? N VAL A 23 O PHE A 131 ? O PHE A 147 AA1 2 3 O CYS A 130 ? O CYS A 146 N VAL A 42 ? N VAL A 58 AA1 3 4 N PHE A 44 ? N PHE A 60 O LEU A 86 ? O LEU A 102 AA2 1 2 N PHE A 23 ? N PHE A 39 O LEU A 107 ? O LEU A 123 AA2 2 3 O ALA A 108 ? O ALA A 124 N ARG A 59 ? N ARG A 75 AA2 3 4 N LEU A 60 ? N LEU A 76 O HIS A 70 ? O HIS A 86 AA3 1 2 N PHE A 23 ? N PHE A 39 O LEU A 107 ? O LEU A 123 AA3 2 3 O ALA A 108 ? O ALA A 124 N ARG A 59 ? N ARG A 75 AA3 3 4 N TYR A 56 ? N TYR A 72 O GLN A 75 ? O GLN A 91 # _atom_sites.entry_id 5CVZ _atom_sites.fract_transf_matrix[1][1] 0.004418 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.004418 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004418 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 17 17 ALA ALA A . n A 1 2 ALA 2 18 18 ALA ALA A . n A 1 3 ALA 3 19 19 ALA ALA A . n A 1 4 THR 4 20 20 THR THR A . n A 1 5 SER 5 21 21 SER SER A . n A 1 6 LEU 6 22 22 LEU LEU A . n A 1 7 VAL 7 23 23 VAL VAL A . n A 1 8 TYR 8 24 24 TYR TYR A . n A 1 9 ASP 9 25 25 ASP ASP A . n A 1 10 THR 10 26 26 THR THR A . n A 1 11 CYS 11 27 27 CYS CYS A . n A 1 12 TYR 12 28 28 TYR TYR A . n A 1 13 VAL 13 29 29 VAL VAL A . n A 1 14 THR 14 30 30 THR THR A . n A 1 15 LEU 15 31 31 LEU LEU A . n A 1 16 THR 16 32 32 THR THR A . n A 1 17 GLU 17 33 33 GLU GLU A . n A 1 18 ARG 18 34 34 ARG ARG A . n A 1 19 ALA 19 35 35 ALA ALA A . n A 1 20 THR 20 36 36 THR THR A . n A 1 21 THR 21 37 37 THR THR A . n A 1 22 SER 22 38 38 SER SER A . n A 1 23 PHE 23 39 39 PHE PHE A . n A 1 24 GLN 24 40 40 GLN GLN A . n A 1 25 ARG 25 41 41 ARG ARG A . n A 1 26 GLN 26 42 42 GLN GLN A . n A 1 27 SER 27 43 43 SER SER A . n A 1 28 PHE 28 44 44 PHE PHE A . n A 1 29 PRO 29 45 45 PRO PRO A . n A 1 30 THR 30 46 46 THR THR A . n A 1 31 LEU 31 47 47 LEU LEU A . n A 1 32 LYS 32 48 48 LYS LYS A . n A 1 33 GLY 33 49 49 GLY GLY A . n A 1 34 MET 34 50 50 MET MET A . n A 1 35 GLY 35 51 51 GLY GLY A . n A 1 36 ASP 36 52 52 ASP ASP A . n A 1 37 ARG 37 53 53 ARG ARG A . n A 1 38 ALA 38 54 54 ALA ALA A . n A 1 39 PHE 39 55 55 PHE PHE A . n A 1 40 GLN 40 56 56 GLN GLN A . n A 1 41 VAL 41 57 57 VAL VAL A . n A 1 42 VAL 42 58 58 VAL VAL A . n A 1 43 ALA 43 59 59 ALA ALA A . n A 1 44 PHE 44 60 60 PHE PHE A . n A 1 45 THR 45 61 61 THR THR A . n A 1 46 ILE 46 62 62 ILE ILE A . n A 1 47 GLN 47 63 63 GLN GLN A . n A 1 48 GLY 48 64 64 GLY GLY A . n A 1 49 VAL 49 65 65 VAL VAL A . n A 1 50 SER 50 66 66 SER SER A . n A 1 51 ALA 51 67 67 ALA ALA A . n A 1 52 ALA 52 68 68 ALA ALA A . n A 1 53 PRO 53 69 69 PRO PRO A . n A 1 54 LEU 54 70 70 LEU LEU A . n A 1 55 MET 55 71 71 MET MET A . n A 1 56 TYR 56 72 72 TYR TYR A . n A 1 57 ASN 57 73 73 ASN ASN A . n A 1 58 ALA 58 74 74 ALA ALA A . n A 1 59 ARG 59 75 75 ARG ARG A . n A 1 60 LEU 60 76 76 LEU LEU A . n A 1 61 TYR 61 77 77 TYR TYR A . n A 1 62 ASN 62 78 78 ASN ASN A . n A 1 63 PRO 63 79 79 PRO PRO A . n A 1 64 GLY 64 80 80 GLY GLY A . n A 1 65 ASP 65 81 81 ASP ASP A . n A 1 66 THR 66 82 82 THR THR A . n A 1 67 ASP 67 83 83 ASP ASP A . n A 1 68 SER 68 84 84 SER SER A . n A 1 69 VAL 69 85 85 VAL VAL A . n A 1 70 HIS 70 86 86 HIS HIS A . n A 1 71 ALA 71 87 87 ALA ALA A . n A 1 72 THR 72 88 88 THR THR A . n A 1 73 GLY 73 89 89 GLY GLY A . n A 1 74 VAL 74 90 90 VAL VAL A . n A 1 75 GLN 75 91 91 GLN GLN A . n A 1 76 LEU 76 92 92 LEU LEU A . n A 1 77 MET 77 93 93 MET MET A . n A 1 78 GLY 78 94 94 GLY GLY A . n A 1 79 THR 79 95 95 THR THR A . n A 1 80 VAL 80 96 96 VAL VAL A . n A 1 81 PRO 81 97 97 PRO PRO A . n A 1 82 ARG 82 98 98 ARG ARG A . n A 1 83 THR 83 99 99 THR THR A . n A 1 84 VAL 84 100 100 VAL VAL A . n A 1 85 ARG 85 101 101 ARG ARG A . n A 1 86 LEU 86 102 102 LEU LEU A . n A 1 87 THR 87 103 103 THR THR A . n A 1 88 PRO 88 104 104 PRO PRO A . n A 1 89 ARG 89 105 105 ARG ARG A . n A 1 90 VAL 90 106 106 VAL VAL A . n A 1 91 GLY 91 107 107 GLY GLY A . n A 1 92 GLN 92 108 108 GLN GLN A . n A 1 93 ASN 93 109 109 ASN ASN A . n A 1 94 ASN 94 110 110 ASN ASN A . n A 1 95 TRP 95 111 111 TRP TRP A . n A 1 96 PHE 96 112 112 PHE PHE A . n A 1 97 PHE 97 113 113 PHE PHE A . n A 1 98 GLY 98 114 114 GLY GLY A . n A 1 99 ASN 99 115 115 ASN ASN A . n A 1 100 THR 100 116 116 THR THR A . n A 1 101 GLU 101 117 117 GLU GLU A . n A 1 102 GLU 102 118 118 GLU GLU A . n A 1 103 ALA 103 119 119 ALA ALA A . n A 1 104 GLU 104 120 120 GLU GLU A . n A 1 105 THR 105 121 121 THR THR A . n A 1 106 ILE 106 122 122 ILE ILE A . n A 1 107 LEU 107 123 123 LEU LEU A . n A 1 108 ALA 108 124 124 ALA ALA A . n A 1 109 ILE 109 125 125 ILE ILE A . n A 1 110 ASP 110 126 126 ASP ASP A . n A 1 111 GLY 111 127 127 GLY GLY A . n A 1 112 LEU 112 128 128 LEU LEU A . n A 1 113 VAL 113 129 129 VAL VAL A . n A 1 114 SER 114 130 130 SER SER A . n A 1 115 THR 115 131 131 THR THR A . n A 1 116 LYS 116 132 132 LYS LYS A . n A 1 117 GLY 117 133 133 GLY GLY A . n A 1 118 ALA 118 134 134 ALA ALA A . n A 1 119 ASN 119 135 135 ASN ASN A . n A 1 120 ALA 120 136 136 ALA ALA A . n A 1 121 PRO 121 137 137 PRO PRO A . n A 1 122 SER 122 138 138 SER SER A . n A 1 123 ASN 123 139 139 ASN ASN A . n A 1 124 THR 124 140 140 THR THR A . n A 1 125 VAL 125 141 141 VAL VAL A . n A 1 126 ILE 126 142 142 ILE ILE A . n A 1 127 VAL 127 143 143 VAL VAL A . n A 1 128 THR 128 144 144 THR THR A . n A 1 129 GLY 129 145 145 GLY GLY A . n A 1 130 CYS 130 146 146 CYS CYS A . n A 1 131 PHE 131 147 147 PHE PHE A . n A 1 132 ARG 132 148 148 ARG ARG A . n A 1 133 LEU 133 149 149 LEU LEU A . n A 1 134 ALA 134 150 150 ALA ALA A . n A 1 135 PRO 135 151 151 PRO PRO A . n A 1 136 SER 136 152 152 SER SER A . n A 1 137 GLU 137 153 153 GLU GLU A . n A 1 138 LEU 138 154 154 LEU LEU A . n A 1 139 GLN 139 155 155 GLN GLN A . n A 1 140 SER 140 156 156 SER SER A . n A 1 141 SER 141 157 157 SER SER A . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 60-meric 60 2 'icosahedral asymmetric unit' ? monomeric 1 3 'icosahedral pentamer' ? pentameric 5 4 'icosahedral 23 hexamer' ? hexameric 6 5 'icosahedral asymmetric unit, std point frame' ? monomeric 1 6 'crystal asymmetric unit, crystal frame' ? eicosameric 20 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A 2 1 A 3 '(1-5)' A 4 '(1,2,6,10,23,24)' A 5 P A 6 '(X0)(1-5,11-15,26-35)' A # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.23056886 -0.11735092 0.96595381 -1.85531 0.66951914 -0.73949169 0.06997253 0.00000 0.70610348 0.66285805 0.24907244 -4.85727 X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.93585000 -0.12085600 0.33102500 -0.43510 0.35238000 0.33039700 -0.87559500 3.55330 -0.00354900 0.93607300 0.35178900 -0.84690 3 'point symmetry operation' ? ? 0.83205300 0.15682900 0.53206400 -1.55190 0.44930700 -0.75304600 -0.48067100 5.31560 0.32528600 0.63900400 -0.69703900 2.18280 4 'point symmetry operation' ? ? 0.83205300 0.44930700 0.32528700 -1.80720 0.15683000 -0.75304800 0.63900200 2.85150 0.53206400 -0.48066900 -0.69704000 4.90230 5 'point symmetry operation' ? ? 0.93585000 0.35238100 -0.00354700 -0.84810 -0.12085800 0.33039500 0.93607300 -0.43380 0.33102600 -0.87559500 0.35178800 3.55320 6 'point symmetry operation' ? ? -0.00354900 0.93607300 0.35178900 -0.84690 0.93585000 -0.12085600 0.33102500 -0.43510 0.35238000 0.33039700 -0.87559500 3.55330 7 'point symmetry operation' ? ? 0.32528600 0.63900400 -0.69703900 2.18280 0.83205300 0.15682900 0.53206400 -1.55190 0.44930700 -0.75304600 -0.48067100 5.31560 8 'point symmetry operation' ? ? 0.53206400 -0.48066900 -0.69704000 4.90230 0.83205300 0.44930700 0.32528700 -1.80720 0.15683000 -0.75304800 0.63900200 2.85150 9 'point symmetry operation' ? ? 0.33102600 -0.87559500 0.35178800 3.55320 0.93585000 0.35238100 -0.00354700 -0.84810 -0.12085800 0.33039500 0.93607300 -0.43380 10 'point symmetry operation' ? ? 0.00000100 0.00000000 1.00000000 0.00000 1.00000000 0.00000200 -0.00000100 -0.00010 -0.00000200 1.00000000 0.00000000 0.00010 11 'point symmetry operation' ? ? -0.10215700 -0.99026300 0.09457000 5.95150 -0.99026300 0.09219600 -0.10430300 5.96510 0.09456800 -0.10430400 -0.99003900 5.95740 12 'point symmetry operation' ? ? -0.44488900 -0.22630900 0.86652100 2.39710 -0.89387900 0.05250500 -0.44522200 6.81190 0.05526100 -0.97264000 -0.22565100 6.38400 13 'point symmetry operation' ? ? -0.49917100 0.79012200 0.35571700 1.05270 -0.81645500 -0.29138200 -0.49849600 7.76430 -0.29022300 -0.53926200 0.79054900 3.09500 14 'point symmetry operation' ? ? -0.18998800 0.65435800 -0.73192900 3.77620 -0.86498800 -0.46422500 -0.19049900 7.50620 -0.46443500 0.59691700 0.65421000 0.63550 15 'point symmetry operation' ? ? 0.05538100 -0.44598100 -0.89332700 6.80380 -0.97240700 -0.22716100 0.05312400 6.39430 -0.22662100 0.86573600 -0.44625600 2.40460 16 'point symmetry operation' ? ? -0.89387900 0.05250500 -0.44522200 6.81190 0.05526100 -0.97264000 -0.22565100 6.38400 -0.44488900 -0.22630900 0.86652100 2.39710 17 'point symmetry operation' ? ? -0.81645500 -0.29138200 -0.49849600 7.76430 -0.29022300 -0.53926200 0.79054900 3.09500 -0.49917100 0.79012200 0.35571700 1.05270 18 'point symmetry operation' ? ? -0.86498800 -0.46422500 -0.19049900 7.50620 -0.46443500 0.59691700 0.65421000 0.63550 -0.18998800 0.65435800 -0.73192900 3.77620 19 'point symmetry operation' ? ? -0.97240700 -0.22716100 0.05312400 6.39430 -0.22662100 0.86573600 -0.44625600 2.40460 0.05538100 -0.44598100 -0.89332700 6.80380 20 'point symmetry operation' ? ? -0.99026300 0.09219600 -0.10430300 5.96510 0.09456800 -0.10430400 -0.99003900 5.95740 -0.10215700 -0.99026300 0.09457000 5.95150 21 'point symmetry operation' ? ? 0.15683000 -0.75304800 0.63900200 2.85150 0.53206400 -0.48066900 -0.69704000 4.90230 0.83205300 0.44930700 0.32528700 -1.80720 22 'point symmetry operation' ? ? -0.12085800 0.33039500 0.93607300 -0.43380 0.33102600 -0.87559500 0.35178800 3.55320 0.93585000 0.35238100 -0.00354700 -0.84810 23 'point symmetry operation' ? ? -0.00000200 1.00000000 0.00000000 0.00010 0.00000100 0.00000000 1.00000000 0.00000 1.00000000 0.00000200 -0.00000100 -0.00010 24 'point symmetry operation' ? ? 0.35238000 0.33039700 -0.87559500 3.55330 -0.00354900 0.93607300 0.35178900 -0.84690 0.93585000 -0.12085600 0.33102500 -0.43510 25 'point symmetry operation' ? ? 0.44930700 -0.75304600 -0.48067100 5.31560 0.32528600 0.63900400 -0.69703900 2.18280 0.83205300 0.15682900 0.53206400 -1.55190 26 'point symmetry operation' ? ? -0.48134700 0.44788400 -0.75346200 5.32330 -0.69713500 0.32544500 0.63881800 2.18330 0.53132700 0.83275800 0.15558300 -1.54800 27 'point symmetry operation' ? ? -0.28996900 -0.49914100 -0.81656400 7.76230 -0.53999900 0.78976000 -0.29099800 3.10190 0.79013900 0.35656300 -0.49854100 1.04810 28 'point symmetry operation' ? ? -0.44435800 -0.89423200 0.05380000 6.80640 -0.22602800 0.05380100 -0.97263400 6.38950 0.86686600 -0.44435800 -0.22602800 2.39360 29 'point symmetry operation' ? ? -0.73115400 -0.19138600 0.65481600 3.77670 -0.18912000 -0.86536300 -0.46409100 7.50280 0.65547500 -0.46316100 0.59651900 0.62910 30 'point symmetry operation' ? ? -0.75401400 0.63808900 0.15590200 2.85990 -0.48027800 -0.69747700 0.53184500 4.90300 0.44810300 0.32614200 0.83236700 -1.80720 31 'point symmetry operation' ? ? 0.79064300 -0.29016600 -0.53915400 3.09420 0.35645300 -0.49782100 0.79064200 1.04480 -0.49782000 -0.81729900 -0.29016900 7.76120 32 'point symmetry operation' ? ? 0.63958800 -0.69611100 0.32612400 2.17570 0.15536000 0.53254300 0.83202200 -1.54890 -0.75285500 -0.48148500 0.44875600 5.31920 33 'point symmetry operation' ? ? 0.35210500 -0.00201500 0.93595800 -0.85220 0.33009800 0.93600800 -0.12216700 -0.42870 -0.87581800 0.35197400 0.33023800 3.55580 34 'point symmetry operation' ? ? 0.32548500 0.83290600 0.44757900 -1.80510 0.63918700 0.15500200 -0.75326900 2.85700 -0.69677800 0.53126500 -0.48193200 4.90790 35 'point symmetry operation' ? ? 0.59651700 0.65481800 -0.46409200 0.63390 0.65547500 -0.73115300 -0.18912200 3.76780 -0.46316300 -0.19138600 -0.86536200 7.50690 36 'point symmetry operation' ? ? -0.46443500 0.59691700 0.65421000 0.63550 -0.18998800 0.65435800 -0.73192900 3.77620 -0.86498800 -0.46422500 -0.19049900 7.50620 37 'point symmetry operation' ? ? -0.22662100 0.86573600 -0.44625600 2.40460 0.05538100 -0.44598100 -0.89332700 6.80380 -0.97240700 -0.22716100 0.05312400 6.39430 38 'point symmetry operation' ? ? 0.09456800 -0.10430400 -0.99003900 5.95740 -0.10215700 -0.99026300 0.09457000 5.95150 -0.99026300 0.09219600 -0.10430300 5.96510 39 'point symmetry operation' ? ? 0.05526100 -0.97264000 -0.22565100 6.38400 -0.44488900 -0.22630900 0.86652100 2.39710 -0.89387900 0.05250500 -0.44522200 6.81190 40 'point symmetry operation' ? ? -0.29022300 -0.53926200 0.79054900 3.09500 -0.49917100 0.79012200 0.35571700 1.05270 -0.81645500 -0.29138200 -0.49849600 7.76430 41 'point symmetry operation' ? ? 0.15536000 0.53254300 0.83202200 -1.54890 -0.75285500 -0.48148500 0.44875600 5.31920 0.63958800 -0.69611100 0.32612400 2.17570 42 'point symmetry operation' ? ? 0.33009800 0.93600800 -0.12216700 -0.42870 -0.87581800 0.35197400 0.33023800 3.55580 0.35210500 -0.00201500 0.93595800 -0.85220 43 'point symmetry operation' ? ? 0.63918700 0.15500200 -0.75326900 2.85700 -0.69677800 0.53126500 -0.48193200 4.90790 0.32548500 0.83290600 0.44757900 -1.80510 44 'point symmetry operation' ? ? 0.65547500 -0.73115300 -0.18912200 3.76780 -0.46316300 -0.19138600 -0.86536200 7.50690 0.59651700 0.65481800 -0.46409200 0.63390 45 'point symmetry operation' ? ? 0.35645300 -0.49782100 0.79064200 1.04480 -0.49782000 -0.81729900 -0.29016900 7.76120 0.79064300 -0.29016600 -0.53915400 3.09420 46 'point symmetry operation' ? ? 0.79013900 0.35656300 -0.49854100 1.04810 -0.28996900 -0.49914100 -0.81656400 7.76230 -0.53999900 0.78976000 -0.29099800 3.10190 47 'point symmetry operation' ? ? 0.86686600 -0.44435800 -0.22602800 2.39360 -0.44435800 -0.89423200 0.05380000 6.80640 -0.22602800 0.05380100 -0.97263400 6.38950 48 'point symmetry operation' ? ? 0.65547500 -0.46316100 0.59651900 0.62910 -0.73115400 -0.19138600 0.65481600 3.77670 -0.18912000 -0.86536300 -0.46409100 7.50280 49 'point symmetry operation' ? ? 0.44810300 0.32614200 0.83236700 -1.80720 -0.75401400 0.63808900 0.15590200 2.85990 -0.48027800 -0.69747700 0.53184500 4.90300 50 'point symmetry operation' ? ? 0.53132700 0.83275800 0.15558300 -1.54800 -0.48134700 0.44788400 -0.75346200 5.32330 -0.69713500 0.32544500 0.63881800 2.18330 51 'point symmetry operation' ? ? -0.46316300 -0.19138600 -0.86536200 7.50690 0.59651700 0.65481800 -0.46409200 0.63390 0.65547500 -0.73115300 -0.18912200 3.76780 52 'point symmetry operation' ? ? -0.49782000 -0.81729900 -0.29016900 7.76120 0.79064300 -0.29016600 -0.53915400 3.09420 0.35645300 -0.49782100 0.79064200 1.04480 53 'point symmetry operation' ? ? -0.75285500 -0.48148500 0.44875600 5.31920 0.63958800 -0.69611100 0.32612400 2.17570 0.15536000 0.53254300 0.83202200 -1.54890 54 'point symmetry operation' ? ? -0.87581800 0.35197400 0.33023800 3.55580 0.35210500 -0.00201500 0.93595800 -0.85220 0.33009800 0.93600800 -0.12216700 -0.42870 55 'point symmetry operation' ? ? -0.69677800 0.53126500 -0.48193200 4.90790 0.32548500 0.83290600 0.44757900 -1.80510 0.63918700 0.15500200 -0.75326900 2.85700 56 'point symmetry operation' ? ? -0.48027800 -0.69747700 0.53184500 4.90300 0.44810300 0.32614200 0.83236700 -1.80720 -0.75401400 0.63808900 0.15590200 2.85990 57 'point symmetry operation' ? ? -0.69713500 0.32544500 0.63881800 2.18330 0.53132700 0.83275800 0.15558300 -1.54800 -0.48134700 0.44788400 -0.75346200 5.32330 58 'point symmetry operation' ? ? -0.53999900 0.78976000 -0.29099800 3.10190 0.79013900 0.35656300 -0.49854100 1.04810 -0.28996900 -0.49914100 -0.81656400 7.76230 59 'point symmetry operation' ? ? -0.22602800 0.05380100 -0.97263400 6.38950 0.86686600 -0.44435800 -0.22602800 2.39360 -0.44435800 -0.89423200 0.05380000 6.80640 60 'point symmetry operation' ? ? -0.18912000 -0.86536300 -0.46409100 7.50280 0.65547500 -0.46316100 0.59651900 0.62910 -0.73115400 -0.19138600 0.65481600 3.77670 # _pdbx_point_symmetry.entry_id 5CVZ _pdbx_point_symmetry.Schoenflies_symbol I _pdbx_point_symmetry.circular_symmetry ? _pdbx_point_symmetry.H-M_notation ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-10-11 2 'Structure model' 1 1 2017-10-18 3 'Structure model' 1 2 2018-03-21 4 'Structure model' 1 3 2019-12-25 5 'Structure model' 1 4 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' diffrn_detector 3 4 'Structure model' pdbx_audit_support 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_diffrn_detector.pdbx_collection_date' 3 4 'Structure model' '_pdbx_audit_support.funding_organization' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_pdbx_struct_oper_list.name' 7 5 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 8 5 'Structure model' '_pdbx_struct_oper_list.type' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? CNS ? ? ? . 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? X-PLOR ? ? ? . 3 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? O ? ? ? . 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 PHE _pdbx_validate_rmsd_angle.auth_seq_id_1 44 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 45 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 45 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.52 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.22 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 29 ? ? 176.42 169.23 2 1 LEU A 70 ? ? -173.28 142.58 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM58868-02 1 'CNPq - Conselho Nacional de Desenvolvimento Cientifico e Tecnologico' Brazil ? 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1STM _pdbx_initial_refinement_model.details ? #