HEADER TRANSFERASE 29-JUL-15 5CXQ TITLE CRYSTAL STRUCTURE OF ISOFORM 2 OF PURINE NUCLEOSIDE PHOSPHORYLASE FROM TITLE 2 SCHISTOSOMA MANSONI IN APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PURINE NUCLEOSIDE PHOSPHORYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: INOSINE-GUANOSINE PHOSPHORYLASE; COMPND 5 EC: 2.4.2.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_COMMON: BLOOD FLUKE; SOURCE 4 ORGANISM_TAXID: 6183; SOURCE 5 GENE: SMP_179110; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: LEMO 21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: POPINS3C KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.R.TORINI,L.ROMANELLO,L.BIRD,R.OWENS,J.BRANDAO-NETO,H.M.PEREIRA REVDAT 5 27-SEP-23 5CXQ 1 REMARK REVDAT 4 01-JAN-20 5CXQ 1 REMARK REVDAT 3 17-APR-19 5CXQ 1 REMARK REVDAT 2 26-SEP-18 5CXQ 1 JRNL REMARK REVDAT 1 03-AUG-16 5CXQ 0 JRNL AUTH J.R.TORINI,L.ROMANELLO,F.A.H.BATISTA,V.H.B.SERRAO,M.FAHEEM, JRNL AUTH 2 A.E.ZERAIK,L.BIRD,J.NETTLESHIP,Y.REDDIVARI,R.OWENS, JRNL AUTH 3 R.DEMARCO,J.C.BORGES,J.BRANDAO-NETO,H.D.PEREIRA JRNL TITL THE MOLECULAR STRUCTURE OF SCHISTOSOMA MANSONI PNP ISOFORM 2 JRNL TITL 2 PROVIDES INSIGHTS INTO THE NUCLEOSIDE SELECTIVITY OF PNPS. JRNL REF PLOS ONE V. 13 03532 2018 JRNL REFN ESSN 1932-6203 JRNL PMID 30192840 JRNL DOI 10.1371/JOURNAL.PONE.0203532 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2329 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.5380 - 4.0367 1.00 2706 142 0.1625 0.1755 REMARK 3 2 4.0367 - 3.2044 1.00 2611 145 0.1690 0.2137 REMARK 3 3 3.2044 - 2.7994 1.00 2585 136 0.1851 0.2062 REMARK 3 4 2.7994 - 2.5435 1.00 2588 152 0.1855 0.2062 REMARK 3 5 2.5435 - 2.3612 1.00 2543 142 0.1948 0.2245 REMARK 3 6 2.3612 - 2.2220 1.00 2590 137 0.1840 0.2016 REMARK 3 7 2.2220 - 2.1107 1.00 2534 152 0.1846 0.2178 REMARK 3 8 2.1107 - 2.0188 1.00 2560 153 0.1901 0.2179 REMARK 3 9 2.0188 - 1.9411 1.00 2568 140 0.1982 0.2312 REMARK 3 10 1.9411 - 1.8741 1.00 2530 119 0.2063 0.2628 REMARK 3 11 1.8741 - 1.8155 1.00 2601 122 0.2058 0.2292 REMARK 3 12 1.8155 - 1.7636 1.00 2562 129 0.2066 0.2203 REMARK 3 13 1.7636 - 1.7172 1.00 2515 106 0.2067 0.2402 REMARK 3 14 1.7172 - 1.6753 1.00 2585 140 0.2165 0.2770 REMARK 3 15 1.6753 - 1.6372 1.00 2500 148 0.2159 0.2256 REMARK 3 16 1.6372 - 1.6024 1.00 2571 123 0.2235 0.2710 REMARK 3 17 1.6024 - 1.5703 1.00 2572 143 0.2387 0.2548 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2219 REMARK 3 ANGLE : 1.087 3011 REMARK 3 CHIRALITY : 0.046 352 REMARK 3 PLANARITY : 0.005 391 REMARK 3 DIHEDRAL : 12.287 832 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7881 10.3944 48.0343 REMARK 3 T TENSOR REMARK 3 T11: 0.3010 T22: 0.2038 REMARK 3 T33: 0.3385 T12: -0.0164 REMARK 3 T13: 0.0134 T23: -0.0514 REMARK 3 L TENSOR REMARK 3 L11: 1.4909 L22: 0.9201 REMARK 3 L33: 1.1803 L12: -0.6852 REMARK 3 L13: -0.3614 L23: -0.1269 REMARK 3 S TENSOR REMARK 3 S11: 0.1366 S12: 0.1590 S13: -0.7168 REMARK 3 S21: -0.0534 S22: -0.0937 S23: 0.0428 REMARK 3 S31: 0.4669 S32: -0.0814 S33: -0.0492 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6768 13.9960 53.7582 REMARK 3 T TENSOR REMARK 3 T11: 0.2196 T22: 0.1457 REMARK 3 T33: 0.2595 T12: -0.0229 REMARK 3 T13: 0.0190 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.9270 L22: 0.5160 REMARK 3 L33: 0.7974 L12: -0.2209 REMARK 3 L13: -0.1763 L23: 0.0651 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: -0.0359 S13: -0.3162 REMARK 3 S21: 0.0209 S22: 0.0133 S23: 0.0733 REMARK 3 S31: 0.2843 S32: -0.1169 S33: -0.0173 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4677 29.7571 46.5413 REMARK 3 T TENSOR REMARK 3 T11: 0.1560 T22: 0.1492 REMARK 3 T33: 0.1030 T12: -0.0226 REMARK 3 T13: -0.0123 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 1.0275 L22: 0.9174 REMARK 3 L33: 0.7798 L12: 0.2539 REMARK 3 L13: 0.1661 L23: 0.3476 REMARK 3 S TENSOR REMARK 3 S11: -0.0560 S12: 0.1641 S13: 0.0053 REMARK 3 S21: -0.1765 S22: 0.0121 S23: 0.1015 REMARK 3 S31: -0.0251 S32: -0.1294 S33: 0.0432 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 259 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6791 15.9741 41.1349 REMARK 3 T TENSOR REMARK 3 T11: 0.2270 T22: 0.2271 REMARK 3 T33: 0.1915 T12: -0.0825 REMARK 3 T13: -0.0429 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 2.3951 L22: 1.3781 REMARK 3 L33: 2.4673 L12: -0.0676 REMARK 3 L13: -1.2981 L23: 0.2081 REMARK 3 S TENSOR REMARK 3 S11: -0.0606 S12: 0.1362 S13: -0.3117 REMARK 3 S21: -0.1415 S22: 0.0075 S23: -0.0401 REMARK 3 S31: 0.0959 S32: -0.0569 S33: 0.0874 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CXQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46089 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 44.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.66600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3FAZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8000, 20% ETHYLENE GLYCOL, REMARK 280 30MM SODIUM FLUORIDE, 30MM SODIUM BROMIDE, 30MM SODIUM IODIDE, REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 49.77500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.77500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.77500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.77500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.77500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.77500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 49.77500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 49.77500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 49.77500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 49.77500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 49.77500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 49.77500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 49.77500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 49.77500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 49.77500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 49.77500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 49.77500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 49.77500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 -49.77500 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 49.77500 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 99.55000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 49.77500 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 99.55000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 49.77500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 499 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 THR A 1 REMARK 465 THR A 2 REMARK 465 PRO A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 124 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 308 O HOH A 477 2.17 REMARK 500 O HOH A 448 O HOH A 464 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 5 100.78 20.69 REMARK 500 ILE A 41 2.27 -69.81 REMARK 500 HIS A 66 -178.99 65.49 REMARK 500 THR A 223 -47.89 78.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 590 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 591 DISTANCE = 6.55 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CXS RELATED DB: PDB DBREF 5CXQ A 14 287 UNP G4VP83 G4VP83_SCHMA 1 274 SEQADV 5CXQ MET A 0 UNP G4VP83 INITIATING METHIONINE SEQADV 5CXQ THR A 1 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ THR A 2 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ PRO A 3 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ PRO A 4 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ VAL A 5 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ VAL A 6 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ ALA A 7 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ ASN A 8 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ TYR A 9 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ GLU A 10 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ ASN A 11 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ ALA A 12 UNP G4VP83 EXPRESSION TAG SEQADV 5CXQ SER A 13 UNP G4VP83 EXPRESSION TAG SEQRES 1 A 288 MET THR THR PRO PRO VAL VAL ALA ASN TYR GLU ASN ALA SEQRES 2 A 288 SER MET ALA ALA ASP TYR ILE LYS ARG VAL SER ASN VAL SEQRES 3 A 288 LEU PRO ASP ILE GLY ILE ILE CYS GLY SER GLY LEU GLY SEQRES 4 A 288 LYS LEU ILE GLU GLU ILE GLU GLU ARG LYS VAL ILE PRO SEQRES 5 A 288 TYR ILE ASN ILE PRO ASN PHE PRO LYS THR THR VAL ALA SEQRES 6 A 288 GLY HIS VAL GLY ASN LEU VAL LEU GLY SER VAL GLY GLY SEQRES 7 A 288 ARG LYS ILE VAL ALA MET GLN GLY ARG LEU HIS MET TYR SEQRES 8 A 288 GLU GLY TYR SER ASN GLN GLU ILE ALA LEU PRO ILE ARG SEQRES 9 A 288 VAL MET LYS LEU LEU GLY VAL ARG VAL LEU LEU ILE THR SEQRES 10 A 288 ASN LEU ALA GLY GLY ILE ASN ARG LYS LEU LYS SER GLY SEQRES 11 A 288 ASP PHE VAL LEU ILE LYS GLY HIS ILE ASN PHE PRO GLY SEQRES 12 A 288 LEU GLY LEU ASN ASN VAL LEU VAL GLY PRO ASN GLN ASP SEQRES 13 A 288 GLU PHE GLY PRO ARG PHE PRO ASP LEU SER ASN ALA TYR SEQRES 14 A 288 ASP ARG LEU LEU GLN GLN LEU ALA LEU LYS ILE ALA GLN SEQRES 15 A 288 GLU ASN ASP PHE GLN ASP LEU VAL HIS GLU GLY VAL TYR SEQRES 16 A 288 ALA PHE ASN GLY GLY PRO THR TYR GLU SER PRO ASP GLU SEQRES 17 A 288 SER ASN MET LEU LEU LYS LEU GLY CYS ASP VAL VAL GLY SEQRES 18 A 288 MET SER THR VAL PRO GLU VAL ILE ILE ALA CYS HIS CYS SEQRES 19 A 288 GLY ILE LYS VAL LEU ALA VAL SER LEU ILE ALA ASN ASN SEQRES 20 A 288 SER ILE LEU ASP ALA GLU ASN ASP VAL SER ILE ASN HIS SEQRES 21 A 288 GLU LYS VAL LEU ALA VAL ALA GLU LYS ARG ALA ASP LEU SEQRES 22 A 288 LEU GLN MET TRP PHE LYS GLU ILE ILE THR ARG LEU PRO SEQRES 23 A 288 LEU ASP FORMUL 2 HOH *291(H2 O) HELIX 1 AA1 ASN A 8 ASN A 24 1 17 HELIX 2 AA2 GLY A 38 GLU A 43 5 6 HELIX 3 AA3 ILE A 53 ILE A 55 5 3 HELIX 4 AA4 HIS A 88 GLY A 92 5 5 HELIX 5 AA5 SER A 94 GLY A 109 1 16 HELIX 6 AA6 PHE A 140 GLY A 144 1 5 HELIX 7 AA7 ASP A 169 ASN A 183 1 15 HELIX 8 AA8 PHE A 185 ASP A 187 5 3 HELIX 9 AA9 SER A 204 LEU A 214 1 11 HELIX 10 AB1 THR A 223 CYS A 233 1 11 HELIX 11 AB2 SER A 247 ASP A 254 1 8 HELIX 12 AB3 ASN A 258 LEU A 284 1 27 SHEET 1 AA110 GLU A 45 PRO A 51 0 SHEET 2 AA110 ASN A 69 VAL A 75 -1 O LEU A 70 N ILE A 50 SHEET 3 AA110 ARG A 78 GLN A 84 -1 O GLN A 84 N ASN A 69 SHEET 4 AA110 ILE A 29 ILE A 32 1 N ILE A 29 O VAL A 81 SHEET 5 AA110 VAL A 112 GLY A 121 1 O VAL A 112 N GLY A 30 SHEET 6 AA110 LYS A 236 ASN A 246 1 O ASN A 245 N GLY A 121 SHEET 7 AA110 PHE A 131 ASN A 139 -1 N ILE A 134 O ALA A 239 SHEET 8 AA110 VAL A 189 PHE A 196 1 O HIS A 190 N LEU A 133 SHEET 9 AA110 VAL A 218 GLY A 220 1 O VAL A 218 N ALA A 195 SHEET 10 AA110 VAL A 112 GLY A 121 -1 N GLY A 120 O VAL A 219 CISPEP 1 GLY A 199 PRO A 200 0 10.11 CRYST1 99.550 99.550 99.550 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010045 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010045 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010045 0.00000