HEADER TRANSCRIPTIONAL REGULATOR 30-JUL-15 5CYV TITLE CRYSTAL STRUCTURE OF COUR FROM RHODOCOCCUS JOSTII RHA1 BOUND TO P- TITLE 2 COUMAROYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS JOSTII (STRAIN RHA1); SOURCE 3 ORGANISM_TAXID: 101510; SOURCE 4 STRAIN: RHA1; SOURCE 5 GENE: RHA1_RO05125; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P15TV-LIC KEYWDS TRANSCRIPTION REGULATOR, P-HYDROXYCINNAMATE METABOLISM, MCSG, KEYWDS 2 PF04017, PSI-BIOLOGY, MARR, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, TRANSCRIPTIONAL KEYWDS 4 REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,X.XU,A.DONG,A.SAVCHENKO,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 7 13-MAR-24 5CYV 1 SOURCE REVDAT 6 27-SEP-23 5CYV 1 LINK REVDAT 5 04-DEC-19 5CYV 1 REMARK REVDAT 4 01-NOV-17 5CYV 1 REMARK REVDAT 3 20-SEP-17 5CYV 1 JRNL REMARK REVDAT 2 23-MAR-16 5CYV 1 JRNL REVDAT 1 12-AUG-15 5CYV 0 JRNL AUTH H.OTANI,P.J.STOGIOS,X.XU,B.NOCEK,S.N.LI,A.SAVCHENKO, JRNL AUTH 2 L.D.ELTIS JRNL TITL THE ACTIVITY OF COUR, A MARR FAMILY TRANSCRIPTIONAL JRNL TITL 2 REGULATOR, IS MODULATED THROUGH A NOVEL MOLECULAR MECHANISM. JRNL REF NUCLEIC ACIDS RES. V. 44 595 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 26400178 JRNL DOI 10.1093/NAR/GKV955 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 48184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.090 REMARK 3 FREE R VALUE TEST SET COUNT : 3774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.5393 - 1.5200 0.83 2788 127 0.2673 0.2747 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2344 REMARK 3 ANGLE : 1.850 3173 REMARK 3 CHIRALITY : 0.084 355 REMARK 3 PLANARITY : 0.009 411 REMARK 3 DIHEDRAL : 22.358 977 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CYV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212383. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48946 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.510 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.03300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 67.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.790 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3FM5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 80 MICROL OF NATIVE PROTEIN AT 21 REMARK 280 MG/ML WERE PREINCUBATED WITH 20 MICROL OF 25 MM P- REMARK 280 HYDROXYCINNAMOYL-COA. RESERVOIR = 0.2 M MAGNESIUM ACETATE, 0.1 M REMARK 280 SODIUM CACODYLATE PH 6.5, 4% (W/V) 2-METHYL-2,4-PENTANEDIOL AND REMARK 280 26% (W/V) PEG 8K, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.66800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.66800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.07250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.19250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.07250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.19250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.66800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.07250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.19250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 36.66800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.07250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.19250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER ACCORDING TO SEC-MALS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 500 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 514 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 537 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 ASP A 87 REMARK 465 PRO A 88 REMARK 465 SER A 89 REMARK 465 ASP A 90 REMARK 465 ARG A 91 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 92 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 494 O HOH A 499 2.11 REMARK 500 NE2 GLN A 55 O HOH A 301 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CG ARG B 119 NH2 ARG B 119 4577 0.19 REMARK 500 NE ARG B 119 NE ARG B 119 4577 0.54 REMARK 500 CD ARG B 119 CZ ARG B 119 4577 1.22 REMARK 500 CG ARG B 119 CZ ARG B 119 4577 1.28 REMARK 500 CB ARG B 119 NH2 ARG B 119 4577 1.37 REMARK 500 CD ARG B 119 NH2 ARG B 119 4577 1.48 REMARK 500 NE ARG B 119 CZ ARG B 119 4577 1.58 REMARK 500 CD ARG B 119 NE ARG B 119 4577 1.64 REMARK 500 CG ARG B 119 NH1 ARG B 119 4577 2.16 REMARK 500 O HOH B 318 O HOH B 412 3957 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 90 101.86 -166.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 550 DISTANCE = 7.36 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 78 OE2 REMARK 620 2 HOH A 361 O 80.8 REMARK 620 3 WCA B 201 OAG 170.9 92.7 REMARK 620 4 HOH B 333 O 91.1 171.8 95.2 REMARK 620 5 HOH B 404 O 87.2 89.5 86.4 89.0 REMARK 620 6 HOH B 409 O 95.0 89.9 91.3 91.9 177.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 385 O REMARK 620 2 WCA B 201 OAM 97.4 REMARK 620 3 HOH B 370 O 91.4 93.7 REMARK 620 4 HOH B 415 O 87.4 88.9 177.3 REMARK 620 5 HOH B 427 O 173.8 88.4 86.0 94.9 REMARK 620 6 HOH B 523 O 81.3 175.6 82.1 95.3 92.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 WCA B 201 OAN REMARK 620 2 WCA B 202 OAI 95.5 REMARK 620 3 WCA B 202 OAO 100.4 89.1 REMARK 620 4 HOH B 349 O 174.5 89.2 82.6 REMARK 620 5 HOH B 371 O 90.1 86.7 169.0 87.2 REMARK 620 6 HOH B 378 O 87.5 174.7 86.0 88.1 97.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WCA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WCA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FM5 RELATED DB: PDB REMARK 900 LIGAND-FREE FORM REMARK 900 RELATED ID: MCSG-APC5972 RELATED DB: TARGETTRACK DBREF 5CYV A 1 146 UNP Q0S6D0 Q0S6D0_RHOJR 1 146 DBREF 5CYV B 1 146 UNP Q0S6D0 Q0S6D0_RHOJR 1 146 SEQRES 1 A 146 MET ALA GLU SER GLN ALA LEU SER ASP ASP ILE GLY PHE SEQRES 2 A 146 LEU LEU SER ARG VAL GLY GLY MET VAL LEU GLY ALA VAL SEQRES 3 A 146 ASN LYS ALA LEU VAL PRO THR GLY LEU ARG VAL ARG SER SEQRES 4 A 146 TYR SER VAL LEU VAL LEU ALA CYS GLU GLN ALA GLU GLY SEQRES 5 A 146 VAL ASN GLN ARG GLY VAL ALA ALA THR MET GLY LEU ASP SEQRES 6 A 146 PRO SER GLN ILE VAL GLY LEU VAL ASP GLU LEU GLU GLU SEQRES 7 A 146 ARG GLY LEU VAL VAL ARG THR LEU ASP PRO SER ASP ARG SEQRES 8 A 146 ARG ASN LYS LEU ILE ALA ALA THR GLU GLU GLY ARG ARG SEQRES 9 A 146 LEU ARG ASP ASP ALA LYS ALA ARG VAL ASP ALA ALA HIS SEQRES 10 A 146 GLY ARG TYR PHE GLU GLY ILE PRO ASP THR VAL VAL ASN SEQRES 11 A 146 GLN MET ARG ASP THR LEU GLN SER ILE ALA PHE PRO THR SEQRES 12 A 146 PHE VAL GLU SEQRES 1 B 146 MET ALA GLU SER GLN ALA LEU SER ASP ASP ILE GLY PHE SEQRES 2 B 146 LEU LEU SER ARG VAL GLY GLY MET VAL LEU GLY ALA VAL SEQRES 3 B 146 ASN LYS ALA LEU VAL PRO THR GLY LEU ARG VAL ARG SER SEQRES 4 B 146 TYR SER VAL LEU VAL LEU ALA CYS GLU GLN ALA GLU GLY SEQRES 5 B 146 VAL ASN GLN ARG GLY VAL ALA ALA THR MET GLY LEU ASP SEQRES 6 B 146 PRO SER GLN ILE VAL GLY LEU VAL ASP GLU LEU GLU GLU SEQRES 7 B 146 ARG GLY LEU VAL VAL ARG THR LEU ASP PRO SER ASP ARG SEQRES 8 B 146 ARG ASN LYS LEU ILE ALA ALA THR GLU GLU GLY ARG ARG SEQRES 9 B 146 LEU ARG ASP ASP ALA LYS ALA ARG VAL ASP ALA ALA HIS SEQRES 10 B 146 GLY ARG TYR PHE GLU GLY ILE PRO ASP THR VAL VAL ASN SEQRES 11 B 146 GLN MET ARG ASP THR LEU GLN SER ILE ALA PHE PRO THR SEQRES 12 B 146 PHE VAL GLU HET MG A 201 1 HET MG A 202 1 HET MG A 203 1 HET ACT A 204 4 HET CL A 205 1 HET CL A 206 1 HET WCA B 201 59 HET WCA B 202 59 HET CL B 203 1 HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION HETNAM CL CHLORIDE ION HETNAM WCA P-COUMAROYL-COA FORMUL 3 MG 3(MG 2+) FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 CL 3(CL 1-) FORMUL 9 WCA 2(C30 H42 N7 O18 P3 S) FORMUL 12 HOH *452(H2 O) HELIX 1 AA1 ALA A 6 ASP A 9 5 4 HELIX 2 AA2 ASP A 10 VAL A 31 1 22 HELIX 3 AA3 PRO A 32 GLY A 34 5 3 HELIX 4 AA4 ARG A 36 GLU A 48 1 13 HELIX 5 AA5 GLN A 55 GLY A 63 1 9 HELIX 6 AA6 ASP A 65 ARG A 79 1 15 HELIX 7 AA7 THR A 99 GLU A 122 1 24 HELIX 8 AA8 PRO A 125 PHE A 141 1 17 HELIX 9 AA9 ALA B 6 ASP B 9 5 4 HELIX 10 AB1 ASP B 10 VAL B 31 1 22 HELIX 11 AB2 PRO B 32 GLY B 34 5 3 HELIX 12 AB3 ARG B 36 GLU B 48 1 13 HELIX 13 AB4 ASN B 54 GLY B 63 1 10 HELIX 14 AB5 ASP B 65 GLN B 68 5 4 HELIX 15 AB6 ILE B 69 ARG B 79 1 11 HELIX 16 AB7 THR B 99 GLU B 122 1 24 HELIX 17 AB8 PRO B 125 PHE B 141 1 17 SHEET 1 AA1 3 VAL A 53 ASN A 54 0 SHEET 2 AA1 3 LEU A 95 ALA A 98 -1 O ILE A 96 N VAL A 53 SHEET 3 AA1 3 VAL A 82 THR A 85 -1 N VAL A 83 O ALA A 97 SHEET 1 AA2 2 VAL B 82 ASP B 87 0 SHEET 2 AA2 2 ASP B 90 ALA B 98 -1 O ASN B 93 N ASP B 87 LINK OE2 GLU A 78 MG MG A 201 1555 1555 2.27 LINK MG MG A 201 O HOH A 361 1555 1555 2.12 LINK MG MG A 201 OAG WCA B 201 1555 3857 2.05 LINK MG MG A 201 O HOH B 333 1555 3857 2.04 LINK MG MG A 201 O HOH B 404 1555 3857 2.09 LINK MG MG A 201 O HOH B 409 1555 3857 1.97 LINK MG MG A 202 O HOH A 385 1555 3857 2.06 LINK MG MG A 202 OAM WCA B 201 1555 1555 2.04 LINK MG MG A 202 O HOH B 370 1555 1555 2.09 LINK MG MG A 202 O HOH B 415 1555 1555 2.07 LINK MG MG A 202 O HOH B 427 1555 1555 2.13 LINK MG MG A 202 O HOH B 523 1555 1555 2.06 LINK MG MG A 203 OAN WCA B 201 1555 1555 2.05 LINK MG MG A 203 OAI WCA B 202 1555 1555 1.96 LINK MG MG A 203 OAO WCA B 202 1555 1555 1.97 LINK MG MG A 203 O HOH B 349 1555 1555 2.13 LINK MG MG A 203 O HOH B 371 1555 1555 2.06 LINK MG MG A 203 O HOH B 378 1555 1555 2.14 SITE 1 AC1 2 GLU A 78 HOH A 361 SITE 1 AC2 5 WCA B 201 HOH B 370 HOH B 415 HOH B 427 SITE 2 AC2 5 HOH B 523 SITE 1 AC3 5 WCA B 201 WCA B 202 HOH B 349 HOH B 371 SITE 2 AC3 5 HOH B 378 SITE 1 AC4 2 ARG A 36 WCA B 202 SITE 1 AC5 1 ARG A 38 SITE 1 AC6 3 ARG A 38 HOH A 342 HOH A 494 SITE 1 AC7 41 VAL A 22 LEU A 23 VAL A 37 ARG A 38 SITE 2 AC7 41 SER A 41 MET A 62 VAL A 113 HIS A 117 SITE 3 AC7 41 MG A 202 MG A 203 ASP B 10 GLY B 12 SITE 4 AC7 41 PHE B 13 SER B 16 GLY B 20 LEU B 23 SITE 5 AC7 41 ARG B 36 WCA B 202 HOH B 333 HOH B 346 SITE 6 AC7 41 HOH B 347 HOH B 352 HOH B 353 HOH B 367 SITE 7 AC7 41 HOH B 368 HOH B 369 HOH B 370 HOH B 371 SITE 8 AC7 41 HOH B 378 HOH B 392 HOH B 394 HOH B 396 SITE 9 AC7 41 HOH B 404 HOH B 409 HOH B 411 HOH B 415 SITE 10 AC7 41 HOH B 418 HOH B 422 HOH B 427 HOH B 437 SITE 11 AC7 41 HOH B 439 SITE 1 AC8 32 PHE A 13 SER A 16 ARG A 17 GLY A 20 SITE 2 AC8 32 LEU A 23 GLY A 24 ASN A 27 LYS A 28 SITE 3 AC8 32 VAL A 31 ARG A 36 MG A 203 ACT A 204 SITE 4 AC8 32 HOH A 327 LEU B 23 VAL B 37 ARG B 38 SITE 5 AC8 32 SER B 41 MET B 62 VAL B 113 HIS B 117 SITE 6 AC8 32 WCA B 201 HOH B 305 HOH B 321 HOH B 333 SITE 7 AC8 32 HOH B 348 HOH B 349 HOH B 368 HOH B 371 SITE 8 AC8 32 HOH B 378 HOH B 414 HOH B 431 HOH B 453 SITE 1 AC9 3 GLN B 55 ARG B 84 HOH B 527 CRYST1 64.145 134.385 73.336 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015590 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007441 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013636 0.00000