HEADER ISOMERASE 10-AUG-15 5D5H TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TOPOISOMERASE I COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TOPOISOMERASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA TOPOISOMERASE I,OMEGA-PROTEIN,RELAXING ENZYME,SWIVELASE, COMPND 5 UNTWISTING ENZYME; COMPND 6 EC: 5.99.1.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: TOPA, RV3646C, MTCY15C10.06; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: T7 EXPRESS CRYSTAL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-HIS6-MOCR TEV-LIC KEYWDS TOPOISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,B.CHENG,Y.C.TSE-DINH REVDAT 6 06-MAR-24 5D5H 1 REMARK REVDAT 5 04-DEC-19 5D5H 1 REMARK REVDAT 4 20-SEP-17 5D5H 1 JRNL REMARK REVDAT 3 10-FEB-16 5D5H 1 JRNL REVDAT 2 30-DEC-15 5D5H 1 JRNL REVDAT 1 16-DEC-15 5D5H 0 JRNL AUTH K.TAN,N.CAO,B.CHENG,A.JOACHIMIAK,Y.C.TSE-DINH JRNL TITL INSIGHTS FROM THE STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 TOPOISOMERASE I WITH A NOVEL PROTEIN FOLD. JRNL REF J.MOL.BIOL. V. 428 182 2016 JRNL REFN ESSN 1089-8638 JRNL PMID 26655023 JRNL DOI 10.1016/J.JMB.2015.11.024 REMARK 2 REMARK 2 RESOLUTION. 2.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 27491 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7870 - 5.4257 0.98 2887 139 0.1480 0.1887 REMARK 3 2 5.4257 - 4.3079 1.00 2800 139 0.1380 0.2053 REMARK 3 3 4.3079 - 3.7638 1.00 2758 147 0.1501 0.2231 REMARK 3 4 3.7638 - 3.4198 1.00 2777 146 0.1773 0.2439 REMARK 3 5 3.4198 - 3.1748 1.00 2739 131 0.1918 0.2700 REMARK 3 6 3.1748 - 2.9877 0.98 2683 137 0.2189 0.2685 REMARK 3 7 2.9877 - 2.8381 0.94 2549 154 0.2164 0.2825 REMARK 3 8 2.8381 - 2.7146 0.87 2334 145 0.2124 0.2996 REMARK 3 9 2.7146 - 2.6101 0.85 2319 122 0.2081 0.2728 REMARK 3 10 2.6101 - 2.5200 0.84 2265 120 0.2321 0.3368 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5479 REMARK 3 ANGLE : 1.083 7438 REMARK 3 CHIRALITY : 0.071 829 REMARK 3 PLANARITY : 0.006 975 REMARK 3 DIHEDRAL : 14.440 2037 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.1364 79.3756 15.2909 REMARK 3 T TENSOR REMARK 3 T11: 0.2617 T22: 0.2871 REMARK 3 T33: 0.2600 T12: -0.0498 REMARK 3 T13: 0.0091 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.8915 L22: 1.8483 REMARK 3 L33: 1.4823 L12: -0.6352 REMARK 3 L13: 0.4556 L23: -0.6398 REMARK 3 S TENSOR REMARK 3 S11: -0.1370 S12: -0.0207 S13: 0.0166 REMARK 3 S21: 0.3411 S22: 0.0975 S23: 0.0005 REMARK 3 S31: -0.1800 S32: -0.1664 S33: 0.0750 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 288 THROUGH 497 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2907 91.5292 22.9872 REMARK 3 T TENSOR REMARK 3 T11: 0.3658 T22: 0.4312 REMARK 3 T33: 0.3898 T12: 0.0680 REMARK 3 T13: 0.0715 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 2.1216 L22: 2.0901 REMARK 3 L33: 2.3368 L12: -1.1540 REMARK 3 L13: 0.4960 L23: -1.0929 REMARK 3 S TENSOR REMARK 3 S11: -0.0769 S12: 0.1442 S13: -0.0676 REMARK 3 S21: 0.3433 S22: 0.1678 S23: 0.4916 REMARK 3 S31: -0.2343 S32: -0.5586 S33: -0.0784 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 498 THROUGH 595 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.0741 86.5358 4.0165 REMARK 3 T TENSOR REMARK 3 T11: 0.2100 T22: 0.3161 REMARK 3 T33: 0.2491 T12: -0.0108 REMARK 3 T13: -0.0207 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 0.9455 L22: 1.5712 REMARK 3 L33: 1.2721 L12: -0.1829 REMARK 3 L13: -0.2120 L23: -0.3899 REMARK 3 S TENSOR REMARK 3 S11: -0.0331 S12: 0.0574 S13: 0.0250 REMARK 3 S21: 0.1383 S22: -0.0931 S23: 0.0500 REMARK 3 S31: -0.2202 S32: -0.0818 S33: 0.1187 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 596 THROUGH 704 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.3731 84.4091 -9.4011 REMARK 3 T TENSOR REMARK 3 T11: 0.3148 T22: 0.5928 REMARK 3 T33: 0.3192 T12: 0.0074 REMARK 3 T13: 0.0216 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.8814 L22: 6.7832 REMARK 3 L33: 2.8051 L12: -0.3079 REMARK 3 L13: 0.0728 L23: -2.8034 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: 0.3922 S13: 0.0996 REMARK 3 S21: -0.6391 S22: -0.2653 S23: -0.4890 REMARK 3 S31: -0.1101 S32: 0.2905 S33: 0.2652 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D5H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212696. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28858 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.520 REMARK 200 RESOLUTION RANGE LOW (A) : 42.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.69600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M TRIS:HCL, REMARK 280 25% (W/V) PEG3350, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.00100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.12150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.57450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.12150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.00100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.57450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 ASN A 0 REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 PRO A 4 REMARK 465 LYS A 5 REMARK 465 THR A 6 REMARK 465 LYS A 7 REMARK 465 GLY A 8 REMARK 465 ARG A 9 REMARK 465 GLY A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 ASN A 14 REMARK 465 GLY A 15 REMARK 465 SER A 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 88 OE1 OE2 REMARK 470 LYS A 224 CD CE NZ REMARK 470 ARG A 250 CZ NH1 NH2 REMARK 470 ASP A 285 CG OD1 OD2 REMARK 470 ASP A 368 OD1 OD2 REMARK 470 LYS A 381 CG CD CE NZ REMARK 470 GLU A 634 OE1 OE2 REMARK 470 LYS A 645 CG CD CE NZ REMARK 470 ASP A 673 CG OD1 OD2 REMARK 470 THR A 674 OG1 CG2 REMARK 470 GLU A 676 CG CD OE1 OE2 REMARK 470 THR A 704 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 186 -60.00 -125.38 REMARK 500 ASP A 231 87.33 -157.35 REMARK 500 PRO A 232 -9.93 -52.76 REMARK 500 ASP A 285 104.69 -52.00 REMARK 500 SER A 293 107.39 -172.89 REMARK 500 TYR A 378 65.46 -114.65 REMARK 500 ALA A 391 172.86 -56.52 REMARK 500 LEU A 462 76.73 -114.86 REMARK 500 LEU A 646 -66.88 -101.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 808 DBREF 5D5H A 2 704 UNP P9WG49 TOP1_MYCTU 2 704 SEQADV 5D5H SER A -1 UNP P9WG49 EXPRESSION TAG SEQADV 5D5H ASN A 0 UNP P9WG49 EXPRESSION TAG SEQADV 5D5H ALA A 1 UNP P9WG49 EXPRESSION TAG SEQRES 1 A 706 SER ASN ALA ALA ASP PRO LYS THR LYS GLY ARG GLY SER SEQRES 2 A 706 GLY GLY ASN GLY SER GLY ARG ARG LEU VAL ILE VAL GLU SEQRES 3 A 706 SER PRO THR LYS ALA ARG LYS LEU ALA SER TYR LEU GLY SEQRES 4 A 706 SER GLY TYR ILE VAL GLU SER SER ARG GLY HIS ILE ARG SEQRES 5 A 706 ASP LEU PRO ARG ALA ALA SER ASP VAL PRO ALA LYS TYR SEQRES 6 A 706 LYS SER GLN PRO TRP ALA ARG LEU GLY VAL ASN VAL ASP SEQRES 7 A 706 ALA ASP PHE GLU PRO LEU TYR ILE ILE SER PRO GLU LYS SEQRES 8 A 706 ARG SER THR VAL SER GLU LEU ARG GLY LEU LEU LYS ASP SEQRES 9 A 706 VAL ASP GLU LEU TYR LEU ALA THR ASP GLY ASP ARG GLU SEQRES 10 A 706 GLY GLU ALA ILE ALA TRP HIS LEU LEU GLU THR LEU LYS SEQRES 11 A 706 PRO ARG ILE PRO VAL LYS ARG MET VAL PHE HIS GLU ILE SEQRES 12 A 706 THR GLU PRO ALA ILE ARG ALA ALA ALA GLU HIS PRO ARG SEQRES 13 A 706 ASP LEU ASP ILE ASP LEU VAL ASP ALA GLN GLU THR ARG SEQRES 14 A 706 ARG ILE LEU ASP ARG LEU TYR GLY TYR GLU VAL SER PRO SEQRES 15 A 706 VAL LEU TRP LYS LYS VAL ALA PRO LYS LEU SER ALA GLY SEQRES 16 A 706 ARG VAL GLN SER VAL ALA THR ARG ILE ILE VAL ALA ARG SEQRES 17 A 706 GLU ARG ASP ARG MET ALA PHE ARG SER ALA ALA TYR TRP SEQRES 18 A 706 ASP ILE LEU ALA LYS LEU ASP ALA SER VAL SER ASP PRO SEQRES 19 A 706 ASP ALA ALA PRO PRO THR PHE SER ALA ARG LEU THR ALA SEQRES 20 A 706 VAL ALA GLY ARG ARG VAL ALA THR GLY ARG ASP PHE ASP SEQRES 21 A 706 SER LEU GLY THR LEU ARG LYS GLY ASP GLU VAL ILE VAL SEQRES 22 A 706 LEU ASP GLU GLY SER ALA THR ALA LEU ALA ALA GLY LEU SEQRES 23 A 706 ASP GLY THR GLN LEU THR VAL ALA SER ALA GLU GLU LYS SEQRES 24 A 706 PRO TYR ALA ARG ARG PRO TYR PRO PRO PHE MET THR SER SEQRES 25 A 706 THR LEU GLN GLN GLU ALA SER ARG LYS LEU ARG PHE SER SEQRES 26 A 706 ALA GLU ARG THR MET SER ILE ALA GLN ARG LEU TYR GLU SEQRES 27 A 706 ASN GLY TYR ILE THR TYR MET ARG THR ASP SER THR THR SEQRES 28 A 706 LEU SER GLU SER ALA ILE ASN ALA ALA ARG THR GLN ALA SEQRES 29 A 706 ARG GLN LEU TYR GLY ASP GLU TYR VAL ALA PRO ALA PRO SEQRES 30 A 706 ARG GLN TYR THR ARG LYS VAL LYS ASN ALA GLN GLU ALA SEQRES 31 A 706 HIS GLU ALA ILE ARG PRO ALA GLY GLU THR PHE ALA THR SEQRES 32 A 706 PRO ASP ALA VAL ARG ARG GLU LEU ASP GLY PRO ASN ILE SEQRES 33 A 706 ASP ASP PHE ARG LEU TYR GLU LEU ILE TRP GLN ARG THR SEQRES 34 A 706 VAL ALA SER GLN MET ALA ASP ALA ARG GLY MET THR LEU SEQRES 35 A 706 SER LEU ARG ILE THR GLY MET SER GLY HIS GLN GLU VAL SEQRES 36 A 706 VAL PHE SER ALA THR GLY ARG THR LEU THR PHE PRO GLY SEQRES 37 A 706 PHE LEU LYS ALA TYR VAL GLU THR VAL ASP GLU LEU VAL SEQRES 38 A 706 GLY GLY GLU ALA ASP ASP ALA GLU ARG ARG LEU PRO HIS SEQRES 39 A 706 LEU THR PRO GLY GLN ARG LEU ASP ILE VAL GLU LEU THR SEQRES 40 A 706 PRO ASP GLY HIS ALA THR ASN PRO PRO ALA ARG TYR THR SEQRES 41 A 706 GLU ALA SER LEU VAL LYS ALA LEU GLU GLU LEU GLY ILE SEQRES 42 A 706 GLY ARG PRO SER THR TYR SER SER ILE ILE LYS THR ILE SEQRES 43 A 706 GLN ASP ARG GLY TYR VAL HIS LYS LYS GLY SER ALA LEU SEQRES 44 A 706 VAL PRO SER TRP VAL ALA PHE ALA VAL THR GLY LEU LEU SEQRES 45 A 706 GLU GLN HIS PHE GLY ARG LEU VAL ASP TYR ASP PHE THR SEQRES 46 A 706 ALA ALA MET GLU ASP GLU LEU ASP GLU ILE ALA ALA GLY SEQRES 47 A 706 ASN GLU ARG ARG THR ASN TRP LEU ASN ASN PHE TYR PHE SEQRES 48 A 706 GLY GLY ASP HIS GLY VAL PRO ASP SER VAL ALA ARG SER SEQRES 49 A 706 GLY GLY LEU LYS LYS LEU VAL GLY ILE ASN LEU GLU GLY SEQRES 50 A 706 ILE ASP ALA ARG GLU VAL ASN SER ILE LYS LEU PHE ASP SEQRES 51 A 706 ASP THR HIS GLY ARG PRO ILE TYR VAL ARG VAL GLY LYS SEQRES 52 A 706 ASN GLY PRO TYR LEU GLU ARG LEU VAL ALA GLY ASP THR SEQRES 53 A 706 GLY GLU PRO THR PRO GLN ARG ALA ASN LEU SER ASP SER SEQRES 54 A 706 ILE THR PRO ASP GLU LEU THR LEU GLN VAL ALA GLU GLU SEQRES 55 A 706 LEU PHE ALA THR HET SO4 A 801 5 HET SO4 A 802 5 HET SO4 A 803 5 HET SO4 A 804 5 HET SO4 A 805 5 HET GOL A 806 6 HET GOL A 807 12 HET ACT A 808 4 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 ACT C2 H3 O2 1- FORMUL 10 HOH *72(H2 O) HELIX 1 AA1 SER A 25 GLY A 37 1 13 HELIX 2 AA2 ALA A 55 VAL A 59 5 5 HELIX 3 AA3 PRO A 60 LYS A 64 5 5 HELIX 4 AA4 LYS A 89 LYS A 101 1 13 HELIX 5 AA5 ASP A 113 LYS A 128 1 16 HELIX 6 AA6 THR A 142 HIS A 152 1 11 HELIX 7 AA7 ASP A 157 VAL A 186 1 30 HELIX 8 AA8 GLY A 193 PHE A 213 1 21 HELIX 9 AA9 THR A 253 PHE A 257 5 5 HELIX 10 AB1 ASP A 273 GLY A 283 1 11 HELIX 11 AB2 MET A 308 ARG A 321 1 14 HELIX 12 AB3 SER A 323 ASN A 337 1 15 HELIX 13 AB4 SER A 351 GLY A 367 1 17 HELIX 14 AB5 ASP A 368 VAL A 371 5 4 HELIX 15 AB6 THR A 401 LEU A 409 1 9 HELIX 16 AB7 ASP A 410 PRO A 412 5 3 HELIX 17 AB8 ASN A 413 SER A 430 1 18 HELIX 18 AB9 PRO A 465 ALA A 470 5 6 HELIX 19 AC1 THR A 518 LEU A 529 1 12 HELIX 20 AC2 THR A 536 ARG A 547 1 12 HELIX 21 AC3 SER A 560 PHE A 574 1 15 HELIX 22 AC4 GLY A 575 VAL A 578 5 4 HELIX 23 AC5 ASP A 579 GLY A 596 1 18 HELIX 24 AC6 ARG A 599 GLY A 610 1 12 HELIX 25 AC7 VAL A 619 SER A 622 5 4 HELIX 26 AC8 GLY A 623 GLY A 630 1 8 HELIX 27 AC9 ASP A 637 ASN A 642 1 6 HELIX 28 AD1 THR A 694 THR A 704 1 11 SHEET 1 AA1 4 TYR A 40 SER A 44 0 SHEET 2 AA1 4 ARG A 19 VAL A 23 1 N ARG A 19 O ILE A 41 SHEET 3 AA1 4 GLU A 105 LEU A 108 1 O TYR A 107 N LEU A 20 SHEET 4 AA1 4 VAL A 133 ARG A 135 1 O LYS A 134 N LEU A 106 SHEET 1 AA2 2 ARG A 50 ASP A 51 0 SHEET 2 AA2 2 ILE A 84 ILE A 85 -1 O ILE A 84 N ASP A 51 SHEET 1 AA3 9 VAL A 269 ILE A 270 0 SHEET 2 AA3 9 ARG A 249 VAL A 251 1 N ARG A 250 O ILE A 270 SHEET 3 AA3 9 THR A 238 VAL A 246 -1 N VAL A 246 O ARG A 249 SHEET 4 AA3 9 GLN A 451 ARG A 460 -1 O VAL A 454 N THR A 244 SHEET 5 AA3 9 ALA A 435 SER A 448 -1 N LEU A 440 O GLY A 459 SHEET 6 AA3 9 GLN A 288 ARG A 301 -1 N LYS A 297 O THR A 439 SHEET 7 AA3 9 ARG A 498 ALA A 510 -1 O LEU A 499 N LEU A 289 SHEET 8 AA3 9 ALA A 217 ASP A 226 -1 N ASP A 220 O ASP A 507 SHEET 9 AA3 9 THR A 238 VAL A 246 -1 O PHE A 239 N LEU A 225 SHEET 1 AA4 2 VAL A 550 LYS A 553 0 SHEET 2 AA4 2 ALA A 556 PRO A 559 -1 O VAL A 558 N HIS A 551 SHEET 1 AA5 4 SER A 643 ASP A 648 0 SHEET 2 AA5 4 PRO A 654 GLY A 660 -1 O VAL A 657 N ILE A 644 SHEET 3 AA5 4 GLY A 663 VAL A 670 -1 O GLY A 663 N GLY A 660 SHEET 4 AA5 4 THR A 678 ASN A 683 -1 O THR A 678 N VAL A 670 CISPEP 1 ALA A 235 PRO A 236 0 0.57 CISPEP 2 GLU A 676 PRO A 677 0 -2.93 SITE 1 AC1 4 ARG A 54 ARG A 168 ARG A 172 HOH A 911 SITE 1 AC2 2 SER A 94 ARG A 97 SITE 1 AC3 6 ASP A 171 GLY A 193 ARG A 194 VAL A 195 SITE 2 AC3 6 GLN A 196 HOH A 931 SITE 1 AC4 2 ILE A 85 ARG A 97 SITE 1 AC5 3 ARG A 326 SER A 329 ARG A 333 SITE 1 AC6 2 HIS A 509 ALA A 510 SITE 1 AC7 5 PRO A 81 TRP A 121 ASP A 162 GLU A 165 SITE 2 AC7 5 ARG A 600 SITE 1 AC8 7 GLY A 112 PHE A 138 HIS A 139 TYR A 342 SITE 2 AC8 7 GLN A 386 GLU A 387 HIS A 389 CRYST1 64.002 93.149 140.243 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015625 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010735 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007130 0.00000