HEADER PROTON TRANSPORT 10-AUG-15 5D5K TITLE CRYSTAL STRUCTURE NLS FROM HUMAN PARP-2 COMPLEXED WITH IMPORTIN ALPHA TITLE 2 DELTA IBB COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMPORTIN SUBUNIT ALPHA-1; COMPND 3 CHAIN: C; COMPND 4 FRAGMENT: UNP RESIDUES 70-529; COMPND 5 SYNONYM: IMPORTIN ALPHA P1,KARYOPHERIN SUBUNIT ALPHA-2,PENDULIN,PORE COMPND 6 TARGETING COMPLEX 58 KDA SUBUNIT,PTAC58,RAG COHORT PROTEIN 1,SRP1- COMPND 7 ALPHA; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE 2; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 1-78; COMPND 13 SYNONYM: HPARP-2,ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 2, COMPND 14 ARTD2,NAD(+) ADP-RIBOSYLTRANSFERASE 2,ADPRT-2,POLY[ADP-RIBOSE] COMPND 15 SYNTHASE 2,PADPRT-2; COMPND 16 EC: 2.4.2.30; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KPNA2, RCH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PARP2, ADPRT2, ADPRTL2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PARP-2 NLS, PARP-2, POLY(ADP-RIBOSE)POLYMERASE-2, IMPORTIN ALPHA, KEYWDS 2 PROTON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.A.RICCIO,G.CINGOLANI,J.M.PASCAL REVDAT 4 27-SEP-23 5D5K 1 REMARK REVDAT 3 25-DEC-19 5D5K 1 REMARK REVDAT 2 04-OCT-17 5D5K 1 JRNL REMARK REVDAT 1 22-JUN-16 5D5K 0 JRNL AUTH A.A.RICCIO,G.CINGOLANI,J.M.PASCAL JRNL TITL PARP-2 DOMAIN REQUIREMENTS FOR DNA DAMAGE-DEPENDENT JRNL TITL 2 ACTIVATION AND LOCALIZATION TO SITES OF DNA DAMAGE. JRNL REF NUCLEIC ACIDS RES. V. 44 1691 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 26704974 JRNL DOI 10.1093/NAR/GKV1376 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 56607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3541 - 5.2390 0.95 2610 156 0.1861 0.2140 REMARK 3 2 5.2390 - 4.1595 1.00 2665 119 0.1370 0.1569 REMARK 3 3 4.1595 - 3.6340 1.00 2596 136 0.1332 0.1429 REMARK 3 4 3.6340 - 3.3019 1.00 2601 142 0.1486 0.1524 REMARK 3 5 3.3019 - 3.0653 1.00 2559 135 0.1491 0.1665 REMARK 3 6 3.0653 - 2.8846 1.00 2577 148 0.1434 0.1686 REMARK 3 7 2.8846 - 2.7402 1.00 2572 132 0.1412 0.1496 REMARK 3 8 2.7402 - 2.6209 1.00 2569 131 0.1381 0.1439 REMARK 3 9 2.6209 - 2.5201 1.00 2559 131 0.1343 0.1556 REMARK 3 10 2.5201 - 2.4331 1.00 2564 138 0.1306 0.1642 REMARK 3 11 2.4331 - 2.3570 1.00 2548 136 0.1371 0.1679 REMARK 3 12 2.3570 - 2.2897 1.00 2524 156 0.1296 0.1514 REMARK 3 13 2.2897 - 2.2294 1.00 2564 109 0.1297 0.1752 REMARK 3 14 2.2294 - 2.1750 1.00 2560 137 0.1439 0.1690 REMARK 3 15 2.1750 - 2.1256 1.00 2510 144 0.1498 0.1531 REMARK 3 16 2.1256 - 2.0803 1.00 2547 136 0.1589 0.1842 REMARK 3 17 2.0803 - 2.0387 1.00 2573 117 0.1704 0.2008 REMARK 3 18 2.0387 - 2.0002 1.00 2512 136 0.1851 0.2054 REMARK 3 19 2.0002 - 1.9645 1.00 2531 122 0.2101 0.2327 REMARK 3 20 1.9645 - 1.9312 1.00 2522 157 0.2270 0.2691 REMARK 3 21 1.9312 - 1.9001 0.99 2471 155 0.2662 0.2858 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3433 REMARK 3 ANGLE : 1.269 4674 REMARK 3 CHIRALITY : 0.074 564 REMARK 3 PLANARITY : 0.007 597 REMARK 3 DIHEDRAL : 13.849 1270 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 73 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8284 -2.6133 116.3494 REMARK 3 T TENSOR REMARK 3 T11: 0.3122 T22: 0.2799 REMARK 3 T33: 0.2307 T12: 0.0085 REMARK 3 T13: -0.0454 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.4161 L22: 3.6533 REMARK 3 L33: 1.5019 L12: -0.2031 REMARK 3 L13: 0.4049 L23: -1.4914 REMARK 3 S TENSOR REMARK 3 S11: 0.1043 S12: 0.0183 S13: -0.1635 REMARK 3 S21: -0.1141 S22: -0.0298 S23: -0.0547 REMARK 3 S31: 0.2370 S32: 0.1232 S33: -0.0686 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 203 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5967 23.5805 112.2733 REMARK 3 T TENSOR REMARK 3 T11: 0.2077 T22: 0.1978 REMARK 3 T33: 0.2520 T12: 0.0166 REMARK 3 T13: -0.0024 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.6471 L22: 2.2814 REMARK 3 L33: 2.0711 L12: 1.0551 REMARK 3 L13: -0.7043 L23: -0.5627 REMARK 3 S TENSOR REMARK 3 S11: 0.1115 S12: 0.1009 S13: 0.2349 REMARK 3 S21: 0.0805 S22: -0.0201 S23: -0.0377 REMARK 3 S31: -0.0591 S32: 0.0351 S33: -0.0777 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 323 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8345 37.4475 82.0369 REMARK 3 T TENSOR REMARK 3 T11: 0.3129 T22: 0.5364 REMARK 3 T33: 0.3526 T12: 0.0070 REMARK 3 T13: -0.0550 T23: 0.1686 REMARK 3 L TENSOR REMARK 3 L11: 2.3178 L22: 2.8173 REMARK 3 L33: 1.7393 L12: 0.2777 REMARK 3 L13: -0.9064 L23: -0.5474 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.8447 S13: 0.3217 REMARK 3 S21: -0.5272 S22: 0.1796 S23: 0.4282 REMARK 3 S31: -0.0051 S32: -0.5050 S33: 0.3851 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0641 32.5854 91.4959 REMARK 3 T TENSOR REMARK 3 T11: 0.5608 T22: 0.6955 REMARK 3 T33: 0.7274 T12: -0.1070 REMARK 3 T13: -0.0252 T23: 0.2475 REMARK 3 L TENSOR REMARK 3 L11: 3.6212 L22: 2.7240 REMARK 3 L33: 5.8827 L12: 2.1929 REMARK 3 L13: -0.8067 L23: 1.6745 REMARK 3 S TENSOR REMARK 3 S11: 0.0582 S12: 0.3354 S13: 0.2267 REMARK 3 S21: -0.2088 S22: 0.0921 S23: 0.3340 REMARK 3 S31: 1.0186 S32: -1.0437 S33: -0.2437 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7610 4.6665 109.5644 REMARK 3 T TENSOR REMARK 3 T11: 0.2191 T22: 0.3339 REMARK 3 T33: 0.2573 T12: 0.0162 REMARK 3 T13: 0.0540 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 3.4398 L22: 8.4242 REMARK 3 L33: 6.6398 L12: -1.9475 REMARK 3 L13: 2.9738 L23: -3.1459 REMARK 3 S TENSOR REMARK 3 S11: 0.0486 S12: 0.0688 S13: 0.2051 REMARK 3 S21: -0.6303 S22: -0.0465 S23: -0.8498 REMARK 3 S31: -0.2214 S32: 0.1129 S33: 0.0048 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D5K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000210827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56607 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1Y2A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.6-0.7M SODIUM CITRATE, 0.1M SODIUM REMARK 280 CITRATE BUFFER PH 5.6, AND 7-10MM DTT, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.32000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.25000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.99000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.25000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.32000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.99000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 64 REMARK 465 ALA C 65 REMARK 465 ASP C 66 REMARK 465 ILE C 67 REMARK 465 GLY C 68 REMARK 465 SER C 69 REMARK 465 ASN C 70 REMARK 465 GLN C 71 REMARK 465 GLY C 72 REMARK 465 SER C 497 REMARK 465 VAL C 498 REMARK 465 GLU C 499 REMARK 465 GLU C 500 REMARK 465 GLU C 501 REMARK 465 GLU C 502 REMARK 465 ASP C 503 REMARK 465 GLN C 504 REMARK 465 ASN C 505 REMARK 465 VAL C 506 REMARK 465 VAL C 507 REMARK 465 PRO C 508 REMARK 465 GLU C 509 REMARK 465 THR C 510 REMARK 465 THR C 511 REMARK 465 SER C 512 REMARK 465 GLU C 513 REMARK 465 GLY C 514 REMARK 465 PHE C 515 REMARK 465 ALA C 516 REMARK 465 PHE C 517 REMARK 465 GLN C 518 REMARK 465 VAL C 519 REMARK 465 GLN C 520 REMARK 465 ASP C 521 REMARK 465 GLY C 522 REMARK 465 ALA C 523 REMARK 465 PRO C 524 REMARK 465 GLY C 525 REMARK 465 THR C 526 REMARK 465 PHE C 527 REMARK 465 ASN C 528 REMARK 465 PHE C 529 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 ALA B 1 REMARK 465 ALA B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 4 REMARK 465 ARG B 5 REMARK 465 ARG B 6 REMARK 465 SER B 7 REMARK 465 THR B 8 REMARK 465 GLY B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 ARG B 12 REMARK 465 ALA B 13 REMARK 465 ARG B 14 REMARK 465 ALA B 15 REMARK 465 LEU B 16 REMARK 465 ASN B 17 REMARK 465 ASN B 24 REMARK 465 GLY B 25 REMARK 465 ASN B 26 REMARK 465 THR B 27 REMARK 465 ALA B 28 REMARK 465 PRO B 29 REMARK 465 GLU B 30 REMARK 465 CYS B 41 REMARK 465 GLN B 42 REMARK 465 ARG B 43 REMARK 465 GLN B 44 REMARK 465 GLU B 45 REMARK 465 SER B 46 REMARK 465 LYS B 47 REMARK 465 LYS B 48 REMARK 465 MET B 49 REMARK 465 PRO B 50 REMARK 465 VAL B 51 REMARK 465 ALA B 52 REMARK 465 GLY B 53 REMARK 465 GLY B 54 REMARK 465 LYS B 55 REMARK 465 ALA B 56 REMARK 465 ASN B 57 REMARK 465 LYS B 58 REMARK 465 ASP B 59 REMARK 465 ARG B 60 REMARK 465 THR B 61 REMARK 465 GLU B 62 REMARK 465 ASP B 63 REMARK 465 LYS B 64 REMARK 465 GLN B 65 REMARK 465 ASP B 66 REMARK 465 GLU B 67 REMARK 465 SER B 68 REMARK 465 VAL B 69 REMARK 465 LYS B 70 REMARK 465 ALA B 71 REMARK 465 LEU B 72 REMARK 465 LEU B 73 REMARK 465 LEU B 74 REMARK 465 LYS B 75 REMARK 465 GLY B 76 REMARK 465 LYS B 77 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 18 CG CD OE1 OE2 REMARK 470 ASP B 31 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS B 37 O HOH B 101 1.37 REMARK 500 HZ2 LYS C 292 O HOH C 605 1.47 REMARK 500 HH12 ARG C 315 O HOH C 601 1.49 REMARK 500 O HOH C 846 O HOH C 871 1.94 REMARK 500 O HOH C 805 O HOH C 834 1.95 REMARK 500 O HOH C 835 O HOH C 867 1.98 REMARK 500 O HOH C 815 O HOH C 819 2.01 REMARK 500 O HOH C 629 O HOH C 835 2.02 REMARK 500 O HOH C 699 O HOH C 826 2.02 REMARK 500 O HOH C 601 O HOH B 109 2.03 REMARK 500 O HOH C 848 O HOH C 855 2.08 REMARK 500 O HOH C 774 O HOH C 871 2.11 REMARK 500 O HOH C 715 O HOH B 101 2.14 REMARK 500 O HOH C 723 O HOH B 107 2.16 REMARK 500 NH1 ARG C 315 O HOH C 601 2.17 REMARK 500 OD1 ASN C 114 O HOH C 602 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 823 O HOH C 839 3557 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN C 88 41.52 -93.32 REMARK 500 ASN C 239 158.44 82.66 REMARK 500 LYS C 432 49.17 -88.47 REMARK 500 REMARK 500 REMARK: NULL DBREF 5D5K C 70 529 UNP P52293 IMA1_MOUSE 70 529 DBREF 5D5K B 0 77 UNP Q9UGN5 PARP2_HUMAN 1 78 SEQADV 5D5K MET C 64 UNP P52293 INITIATING METHIONINE SEQADV 5D5K ALA C 65 UNP P52293 EXPRESSION TAG SEQADV 5D5K ASP C 66 UNP P52293 EXPRESSION TAG SEQADV 5D5K ILE C 67 UNP P52293 EXPRESSION TAG SEQADV 5D5K GLY C 68 UNP P52293 EXPRESSION TAG SEQADV 5D5K SER C 69 UNP P52293 EXPRESSION TAG SEQADV 5D5K MET B -20 UNP Q9UGN5 INITIATING METHIONINE SEQADV 5D5K GLY B -19 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K SER B -18 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K SER B -17 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K HIS B -16 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K HIS B -15 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K HIS B -14 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K HIS B -13 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K HIS B -12 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K HIS B -11 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K SER B -10 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K SER B -9 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K GLY B -8 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K LEU B -7 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K VAL B -6 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K PRO B -5 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K ARG B -4 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K GLY B -3 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K SER B -2 UNP Q9UGN5 EXPRESSION TAG SEQADV 5D5K HIS B -1 UNP Q9UGN5 EXPRESSION TAG SEQRES 1 C 466 MET ALA ASP ILE GLY SER ASN GLN GLY THR VAL ASN TRP SEQRES 2 C 466 SER VAL GLU ASP ILE VAL LYS GLY ILE ASN SER ASN ASN SEQRES 3 C 466 LEU GLU SER GLN LEU GLN ALA THR GLN ALA ALA ARG LYS SEQRES 4 C 466 LEU LEU SER ARG GLU LYS GLN PRO PRO ILE ASP ASN ILE SEQRES 5 C 466 ILE ARG ALA GLY LEU ILE PRO LYS PHE VAL SER PHE LEU SEQRES 6 C 466 GLY LYS THR ASP CYS SER PRO ILE GLN PHE GLU SER ALA SEQRES 7 C 466 TRP ALA LEU THR ASN ILE ALA SER GLY THR SER GLU GLN SEQRES 8 C 466 THR LYS ALA VAL VAL ASP GLY GLY ALA ILE PRO ALA PHE SEQRES 9 C 466 ILE SER LEU LEU ALA SER PRO HIS ALA HIS ILE SER GLU SEQRES 10 C 466 GLN ALA VAL TRP ALA LEU GLY ASN ILE ALA GLY ASP GLY SEQRES 11 C 466 SER ALA PHE ARG ASP LEU VAL ILE LYS HIS GLY ALA ILE SEQRES 12 C 466 ASP PRO LEU LEU ALA LEU LEU ALA VAL PRO ASP LEU SER SEQRES 13 C 466 THR LEU ALA CYS GLY TYR LEU ARG ASN LEU THR TRP THR SEQRES 14 C 466 LEU SER ASN LEU CYS ARG ASN LYS ASN PRO ALA PRO PRO SEQRES 15 C 466 LEU ASP ALA VAL GLU GLN ILE LEU PRO THR LEU VAL ARG SEQRES 16 C 466 LEU LEU HIS HIS ASN ASP PRO GLU VAL LEU ALA ASP SER SEQRES 17 C 466 CYS TRP ALA ILE SER TYR LEU THR ASP GLY PRO ASN GLU SEQRES 18 C 466 ARG ILE GLU MET VAL VAL LYS LYS GLY VAL VAL PRO GLN SEQRES 19 C 466 LEU VAL LYS LEU LEU GLY ALA THR GLU LEU PRO ILE VAL SEQRES 20 C 466 THR PRO ALA LEU ARG ALA ILE GLY ASN ILE VAL THR GLY SEQRES 21 C 466 THR ASP GLU GLN THR GLN LYS VAL ILE ASP ALA GLY ALA SEQRES 22 C 466 LEU ALA VAL PHE PRO SER LEU LEU THR ASN PRO LYS THR SEQRES 23 C 466 ASN ILE GLN LYS GLU ALA THR TRP THR MET SER ASN ILE SEQRES 24 C 466 THR ALA GLY ARG GLN ASP GLN ILE GLN GLN VAL VAL ASN SEQRES 25 C 466 HIS GLY LEU VAL PRO PHE LEU VAL GLY VAL LEU SER LYS SEQRES 26 C 466 ALA ASP PHE LYS THR GLN LYS GLU ALA ALA TRP ALA ILE SEQRES 27 C 466 THR ASN TYR THR SER GLY GLY THR VAL GLU GLN ILE VAL SEQRES 28 C 466 TYR LEU VAL HIS CYS GLY ILE ILE GLU PRO LEU MET ASN SEQRES 29 C 466 LEU LEU SER ALA LYS ASP THR LYS ILE ILE GLN VAL ILE SEQRES 30 C 466 LEU ASP ALA ILE SER ASN ILE PHE GLN ALA ALA GLU LYS SEQRES 31 C 466 LEU GLY GLU THR GLU LYS LEU SER ILE MET ILE GLU GLU SEQRES 32 C 466 CYS GLY GLY LEU ASP LYS ILE GLU ALA LEU GLN ARG HIS SEQRES 33 C 466 GLU ASN GLU SER VAL TYR LYS ALA SER LEU ASN LEU ILE SEQRES 34 C 466 GLU LYS TYR PHE SER VAL GLU GLU GLU GLU ASP GLN ASN SEQRES 35 C 466 VAL VAL PRO GLU THR THR SER GLU GLY PHE ALA PHE GLN SEQRES 36 C 466 VAL GLN ASP GLY ALA PRO GLY THR PHE ASN PHE SEQRES 1 B 98 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 98 LEU VAL PRO ARG GLY SER HIS MET ALA ALA ARG ARG ARG SEQRES 3 B 98 ARG SER THR GLY GLY GLY ARG ALA ARG ALA LEU ASN GLU SEQRES 4 B 98 SER LYS ARG VAL ASN ASN GLY ASN THR ALA PRO GLU ASP SEQRES 5 B 98 SER SER PRO ALA LYS LYS THR ARG ARG CYS GLN ARG GLN SEQRES 6 B 98 GLU SER LYS LYS MET PRO VAL ALA GLY GLY LYS ALA ASN SEQRES 7 B 98 LYS ASP ARG THR GLU ASP LYS GLN ASP GLU SER VAL LYS SEQRES 8 B 98 ALA LEU LEU LEU LYS GLY LYS FORMUL 3 HOH *324(H2 O) HELIX 1 AA1 SER C 77 ASN C 86 1 10 HELIX 2 AA2 ASN C 89 SER C 105 1 17 HELIX 3 AA3 PRO C 111 ALA C 118 1 8 HELIX 4 AA4 GLY C 119 GLY C 129 1 11 HELIX 5 AA5 CYS C 133 SER C 149 1 17 HELIX 6 AA6 THR C 151 GLY C 161 1 11 HELIX 7 AA7 GLY C 162 LEU C 171 1 10 HELIX 8 AA8 HIS C 175 GLY C 191 1 17 HELIX 9 AA9 GLY C 193 HIS C 203 1 11 HELIX 10 AB1 ALA C 205 LEU C 212 1 8 HELIX 11 AB2 ASP C 217 LEU C 221 5 5 HELIX 12 AB3 ALA C 222 CYS C 237 1 16 HELIX 13 AB4 PRO C 245 LEU C 260 1 16 HELIX 14 AB5 ASP C 264 THR C 279 1 16 HELIX 15 AB6 PRO C 282 LYS C 291 1 10 HELIX 16 AB7 VAL C 294 GLY C 303 1 10 HELIX 17 AB8 GLU C 306 VAL C 321 1 16 HELIX 18 AB9 THR C 324 ALA C 334 1 11 HELIX 19 AC1 GLY C 335 ALA C 338 5 4 HELIX 20 AC2 VAL C 339 LEU C 344 1 6 HELIX 21 AC3 LYS C 348 THR C 363 1 16 HELIX 22 AC4 ARG C 366 HIS C 376 1 11 HELIX 23 AC5 LEU C 378 LYS C 388 1 11 HELIX 24 AC6 ASP C 390 GLY C 408 1 19 HELIX 25 AC7 THR C 409 CYS C 419 1 11 HELIX 26 AC8 ILE C 421 LEU C 428 1 8 HELIX 27 AC9 LEU C 429 ALA C 431 5 3 HELIX 28 AD1 ASP C 433 LEU C 454 1 22 HELIX 29 AD2 GLU C 456 CYS C 467 1 12 HELIX 30 AD3 GLY C 468 LEU C 476 1 9 HELIX 31 AD4 GLN C 477 HIS C 479 5 3 HELIX 32 AD5 ASN C 481 PHE C 496 1 16 CISPEP 1 ASN C 241 PRO C 242 0 1.38 CRYST1 78.640 89.980 100.500 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012716 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011114 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009950 0.00000