HEADER CHAPERONE/PROTEIN TRANSPORT 12-AUG-15 5D6H TITLE CRYSTAL STRUCTURE OF CSUC-CSUA/B CHAPERONE-MAJOR SUBUNIT PRE-ASSEMBLY TITLE 2 COMPLEX FROM CSU BIOFILM-MEDIATING PILI OF ACINETOBACTER BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: CSUC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 35-277; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CSUA/B; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 38-180; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: CSUC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET101; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 12 ORGANISM_TAXID: 470; SOURCE 13 GENE: CSUA/B; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 16 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET101 KEYWDS ARCHAIC CHAPERONE-USHER PATHWAY, IG-LIKE FOLD, BETA SHEET SANDWICH, KEYWDS 2 DONOR-STRAND COMPLEMENTATION, CHAPERONE-PROTEIN TRANSPORT COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.A.PAKHARUKOVA,M.TUITILLA,S.PAAVILAINEN,A.ZAVIALOV REVDAT 2 02-DEC-15 5D6H 1 JRNL REVDAT 1 04-NOV-15 5D6H 0 JRNL AUTH N.PAKHARUKOVA,J.A.GARNETT,M.TUITTILA,S.PAAVILAINEN,M.DIALLO, JRNL AUTH 2 Y.XU,S.J.MATTHEWS,A.V.ZAVIALOV JRNL TITL STRUCTURAL INSIGHT INTO ARCHAIC AND ALTERNATIVE JRNL TITL 2 CHAPERONE-USHER PATHWAYS REVEALS A NOVEL MECHANISM OF PILUS JRNL TITL 3 BIOGENESIS. JRNL REF PLOS PATHOG. V. 11 05269 2015 JRNL REFN ESSN 1553-7374 JRNL PMID 26587649 JRNL DOI 10.1371/JOURNAL.PPAT.1005269 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.PAKHARUKOVA,S.PAAVILAINEN,M.TUITILA,A.ZAVIALOV REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION ANALYSIS REMARK 1 TITL 2 OF THE CSU PILI CSUC-CSUA/B CHAPERONE-MAJOR SUBUNIT REMARK 1 TITL 3 PRE-ASSEMBLY COMPLEX FROM ACINETOBACTER BAUMANNII REMARK 1 REF ACTA CRYST V. F71 770 2015 REMARK 1 REFN ESSN 2053-230X REMARK 1 PMID 26057810 REMARK 1 DOI 10.1107/S2053230X15007955 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.830 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 36588 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 3647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9127 - 7.1018 0.97 1246 140 0.2544 0.2832 REMARK 3 2 7.1018 - 5.6402 0.98 1242 142 0.2431 0.2723 REMARK 3 3 5.6402 - 4.9282 0.99 1248 142 0.2083 0.2503 REMARK 3 4 4.9282 - 4.4780 0.99 1256 141 0.1615 0.1893 REMARK 3 5 4.4780 - 4.1573 1.00 1276 139 0.1790 0.2091 REMARK 3 6 4.1573 - 3.9123 1.00 1258 143 0.2008 0.2375 REMARK 3 7 3.9123 - 3.7165 1.00 1277 137 0.2041 0.2448 REMARK 3 8 3.7165 - 3.5548 1.00 1262 144 0.2042 0.2556 REMARK 3 9 3.5548 - 3.4180 1.00 1265 135 0.2060 0.2864 REMARK 3 10 3.4180 - 3.3001 1.00 1284 138 0.2101 0.2725 REMARK 3 11 3.3001 - 3.1969 1.00 1270 142 0.2109 0.2268 REMARK 3 12 3.1969 - 3.1055 1.00 1263 143 0.2095 0.2320 REMARK 3 13 3.1055 - 3.0238 1.00 1271 138 0.2201 0.2589 REMARK 3 14 3.0238 - 2.9500 1.00 1262 142 0.2296 0.2718 REMARK 3 15 2.9500 - 2.8830 1.00 1264 141 0.2397 0.2595 REMARK 3 16 2.8830 - 2.8216 1.00 1290 143 0.2413 0.3415 REMARK 3 17 2.8216 - 2.7652 1.00 1255 137 0.2546 0.3163 REMARK 3 18 2.7652 - 2.7130 1.00 1267 137 0.2213 0.2609 REMARK 3 19 2.7130 - 2.6646 1.00 1282 141 0.2377 0.3194 REMARK 3 20 2.6646 - 2.6194 1.00 1266 139 0.2359 0.2618 REMARK 3 21 2.6194 - 2.5772 1.00 1294 145 0.2444 0.3211 REMARK 3 22 2.5772 - 2.5375 1.00 1258 142 0.2594 0.3306 REMARK 3 23 2.5375 - 2.5002 1.00 1252 136 0.2467 0.3631 REMARK 3 24 2.5002 - 2.4650 1.00 1278 145 0.2688 0.3872 REMARK 3 25 2.4650 - 2.4317 1.00 1252 140 0.2563 0.3258 REMARK 3 26 2.4317 - 2.4001 1.00 1303 135 0.2398 0.2940 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2492 REMARK 3 ANGLE : 1.245 3364 REMARK 3 CHIRALITY : 0.076 395 REMARK 3 PLANARITY : 0.005 422 REMARK 3 DIHEDRAL : 14.918 892 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8340 13.1842 103.1620 REMARK 3 T TENSOR REMARK 3 T11: 0.4243 T22: 0.1283 REMARK 3 T33: 0.1805 T12: 0.2617 REMARK 3 T13: 0.0368 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 1.2243 L22: 1.9684 REMARK 3 L33: 0.8835 L12: -0.6795 REMARK 3 L13: 0.4083 L23: -0.0163 REMARK 3 S TENSOR REMARK 3 S11: -0.1387 S12: -0.1886 S13: 0.0669 REMARK 3 S21: 0.1823 S22: 0.1346 S23: 0.0497 REMARK 3 S31: -0.1076 S32: -0.0782 S33: 0.0642 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.5743 4.8665 100.0848 REMARK 3 T TENSOR REMARK 3 T11: 0.4862 T22: 0.1338 REMARK 3 T33: 0.2526 T12: 0.0009 REMARK 3 T13: 0.0548 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 7.5294 L22: 8.4948 REMARK 3 L33: 2.7961 L12: -3.3124 REMARK 3 L13: -2.4339 L23: 2.6475 REMARK 3 S TENSOR REMARK 3 S11: -0.2200 S12: -0.2621 S13: -0.6564 REMARK 3 S21: 0.7608 S22: -0.1034 S23: 0.8939 REMARK 3 S31: 0.1557 S32: -0.2351 S33: 0.3648 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.4979 8.7458 104.8519 REMARK 3 T TENSOR REMARK 3 T11: 0.3634 T22: 0.1830 REMARK 3 T33: 0.1764 T12: 0.1926 REMARK 3 T13: 0.0347 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 3.1319 L22: 7.9822 REMARK 3 L33: 2.5907 L12: 2.0552 REMARK 3 L13: 0.3288 L23: 3.3429 REMARK 3 S TENSOR REMARK 3 S11: -0.0757 S12: -0.1860 S13: -0.0909 REMARK 3 S21: 0.1627 S22: 0.2666 S23: -0.4951 REMARK 3 S31: -0.0989 S32: 0.1278 S33: -0.1850 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3534 8.3959 89.3524 REMARK 3 T TENSOR REMARK 3 T11: 0.4291 T22: 0.1885 REMARK 3 T33: 0.2025 T12: 0.0449 REMARK 3 T13: -0.0452 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 4.9660 L22: 4.0086 REMARK 3 L33: 5.6843 L12: -0.3713 REMARK 3 L13: 3.3913 L23: 0.6031 REMARK 3 S TENSOR REMARK 3 S11: 0.2473 S12: 0.5094 S13: -0.4208 REMARK 3 S21: -0.8436 S22: -0.1055 S23: 0.3736 REMARK 3 S31: -0.0067 S32: -0.3025 S33: -0.1326 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7655 10.2671 112.5766 REMARK 3 T TENSOR REMARK 3 T11: 0.5475 T22: 0.3749 REMARK 3 T33: 0.2163 T12: 0.3293 REMARK 3 T13: -0.0152 T23: -0.0848 REMARK 3 L TENSOR REMARK 3 L11: 0.3214 L22: 0.8332 REMARK 3 L33: 2.8086 L12: -0.2199 REMARK 3 L13: -0.8634 L23: 1.1747 REMARK 3 S TENSOR REMARK 3 S11: -0.3530 S12: -0.5063 S13: 0.1707 REMARK 3 S21: 0.4878 S22: 0.2499 S23: -0.1816 REMARK 3 S31: 0.1934 S32: 0.1791 S33: 0.1026 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5445 17.5798 94.7392 REMARK 3 T TENSOR REMARK 3 T11: 0.3187 T22: 0.1225 REMARK 3 T33: 0.2167 T12: 0.2661 REMARK 3 T13: -0.0260 T23: 0.0379 REMARK 3 L TENSOR REMARK 3 L11: 2.5771 L22: 3.5668 REMARK 3 L33: 2.7867 L12: -1.8904 REMARK 3 L13: 1.0534 L23: -1.3222 REMARK 3 S TENSOR REMARK 3 S11: -0.0446 S12: 0.1362 S13: 0.2156 REMARK 3 S21: -0.1603 S22: -0.1233 S23: -0.0692 REMARK 3 S31: -0.0729 S32: -0.0380 S33: 0.1929 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6089 25.3193 91.6801 REMARK 3 T TENSOR REMARK 3 T11: 0.4732 T22: 0.5156 REMARK 3 T33: 0.4531 T12: 0.2806 REMARK 3 T13: -0.1320 T23: 0.0896 REMARK 3 L TENSOR REMARK 3 L11: 5.5576 L22: 3.4212 REMARK 3 L33: 5.6256 L12: -1.8203 REMARK 3 L13: -0.8174 L23: -1.5346 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: 0.1115 S13: 0.1712 REMARK 3 S21: -0.0442 S22: -0.0356 S23: 0.0115 REMARK 3 S31: -0.1854 S32: -0.3030 S33: 0.0046 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8606 26.5484 105.1411 REMARK 3 T TENSOR REMARK 3 T11: 0.5292 T22: 0.5004 REMARK 3 T33: 0.4134 T12: 0.5011 REMARK 3 T13: 0.0217 T23: 0.0650 REMARK 3 L TENSOR REMARK 3 L11: 2.8462 L22: 3.5885 REMARK 3 L33: 0.0698 L12: -1.7754 REMARK 3 L13: -0.0244 L23: 0.4243 REMARK 3 S TENSOR REMARK 3 S11: -0.2427 S12: -0.4736 S13: -0.0429 REMARK 3 S21: 0.5909 S22: 0.2917 S23: 0.2829 REMARK 3 S31: -0.0545 S32: -0.2211 S33: -0.0814 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 201 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6709 27.1073 112.4134 REMARK 3 T TENSOR REMARK 3 T11: 0.6436 T22: 0.8526 REMARK 3 T33: 0.6151 T12: 0.4581 REMARK 3 T13: 0.1678 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 4.7996 L22: 4.7460 REMARK 3 L33: 3.9689 L12: -4.2523 REMARK 3 L13: -3.8959 L23: 4.2793 REMARK 3 S TENSOR REMARK 3 S11: -0.2357 S12: -0.5062 S13: 0.0962 REMARK 3 S21: 0.4393 S22: 0.3355 S23: 0.0276 REMARK 3 S31: -0.0316 S32: 0.0704 S33: -0.0813 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2128 31.8955 100.2451 REMARK 3 T TENSOR REMARK 3 T11: 0.7062 T22: 0.5544 REMARK 3 T33: 0.5960 T12: 0.4843 REMARK 3 T13: 0.0186 T23: 0.0964 REMARK 3 L TENSOR REMARK 3 L11: 5.7312 L22: 2.8125 REMARK 3 L33: 0.5025 L12: -3.7253 REMARK 3 L13: -0.8477 L23: 0.9330 REMARK 3 S TENSOR REMARK 3 S11: 0.0549 S12: 0.1306 S13: 0.0695 REMARK 3 S21: 0.0594 S22: -0.0356 S23: 0.2328 REMARK 3 S31: -0.2500 S32: -0.3557 S33: -0.0395 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 7 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.1481 21.8811 119.5740 REMARK 3 T TENSOR REMARK 3 T11: 0.6763 T22: 0.7105 REMARK 3 T33: 0.6269 T12: 0.3046 REMARK 3 T13: 0.0080 T23: -0.2250 REMARK 3 L TENSOR REMARK 3 L11: 1.1420 L22: 2.3055 REMARK 3 L33: 4.1619 L12: 0.1236 REMARK 3 L13: -0.3826 L23: -2.9147 REMARK 3 S TENSOR REMARK 3 S11: 0.0925 S12: -0.7188 S13: 0.2857 REMARK 3 S21: 0.2279 S22: 0.3305 S23: 0.1306 REMARK 3 S31: -0.4704 S32: 0.1471 S33: -0.4367 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6763 18.6418 123.6470 REMARK 3 T TENSOR REMARK 3 T11: 0.5689 T22: 0.6373 REMARK 3 T33: 0.3453 T12: 0.7304 REMARK 3 T13: 0.0938 T23: -0.2498 REMARK 3 L TENSOR REMARK 3 L11: 1.3967 L22: 1.2640 REMARK 3 L33: 0.8415 L12: -0.8472 REMARK 3 L13: -0.6580 L23: 0.6555 REMARK 3 S TENSOR REMARK 3 S11: 0.0103 S12: -0.4276 S13: 0.1119 REMARK 3 S21: 0.2380 S22: 0.1647 S23: -0.0315 REMARK 3 S31: 0.1029 S32: 0.1130 S33: -0.0928 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D6H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212653. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36640 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 46.762 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 15.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04300 REMARK 200 FOR THE DATA SET : 37.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 16.30 REMARK 200 R MERGE FOR SHELL (I) : 0.53900 REMARK 200 R SYM FOR SHELL (I) : 0.53900 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM MALONATE, 15% PEG 3350, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.34933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 124.69867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 62.34933 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 124.69867 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.34933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 124.69867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 62.34933 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 124.69867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 351 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 384 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 395 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 98 REMARK 465 LEU A 99 REMARK 465 SER A 100 REMARK 465 ASP A 101 REMARK 465 GLY A 102 REMARK 465 ASN A 103 REMARK 465 GLU A 104 REMARK 465 GLN A 105 REMARK 465 ASP A 106 REMARK 465 ALA A 107 REMARK 465 GLN A 157 REMARK 465 GLN A 158 REMARK 465 GLY A 159 REMARK 465 GLN A 160 REMARK 465 LYS A 191 REMARK 465 ALA A 192 REMARK 465 GLU A 240 REMARK 465 ASP A 241 REMARK 465 PRO A 242 REMARK 465 SER A 243 REMARK 465 ALA B 1 REMARK 465 VAL B 2 REMARK 465 THR B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 GLN B 19 REMARK 465 THR B 20 REMARK 465 GLU B 21 REMARK 465 GLY B 22 REMARK 465 ASN B 23 REMARK 465 MET B 24 REMARK 465 ASN B 25 REMARK 465 LYS B 26 REMARK 465 PHE B 27 REMARK 465 GLY B 33 REMARK 465 LYS B 34 REMARK 465 THR B 35 REMARK 465 SER B 36 REMARK 465 GLY B 37 REMARK 465 THR B 38 REMARK 465 TRP B 39 REMARK 465 ASN B 40 REMARK 465 ASN B 41 REMARK 465 VAL B 42 REMARK 465 ALA B 45 REMARK 465 GLY B 74 REMARK 465 GLY B 75 REMARK 465 GLU B 76 REMARK 465 ARG B 77 REMARK 465 THR B 78 REMARK 465 ASP B 79 REMARK 465 ARG B 80 REMARK 465 THR B 81 REMARK 465 LEU B 82 REMARK 465 LYS B 83 REMARK 465 ASN B 84 REMARK 465 THR B 85 REMARK 465 ALA B 86 REMARK 465 SER B 87 REMARK 465 ALA B 88 REMARK 465 ASP B 89 REMARK 465 VAL B 90 REMARK 465 VAL B 91 REMARK 465 ALA B 92 REMARK 465 GLY B 118 REMARK 465 GLN B 119 REMARK 465 ALA B 130 REMARK 465 ASN B 132 REMARK 465 THR B 133 REMARK 465 GLY B 134 REMARK 465 GLN B 139 REMARK 465 GLY B 140 REMARK 465 ASP B 141 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 109 CG CD CE NZ REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 HIS B 7 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 18 OG REMARK 470 THR B 52 OG1 CG2 REMARK 470 THR B 135 OG1 CG2 REMARK 470 PRO B 136 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 238 O HOH B 253 1.87 REMARK 500 OH TYR B 93 O HOH B 201 1.87 REMARK 500 O HOH B 243 O HOH B 259 1.89 REMARK 500 O TYR B 93 O HOH B 202 1.90 REMARK 500 O HOH B 204 O HOH B 207 1.90 REMARK 500 O HOH B 215 O HOH B 245 1.93 REMARK 500 O ASN A 185 O HOH A 301 1.96 REMARK 500 O HOH B 234 O HOH B 239 1.99 REMARK 500 O HOH B 236 O HOH B 252 2.04 REMARK 500 O GLY A 190 O HOH A 302 2.04 REMARK 500 O HOH B 205 O HOH B 228 2.05 REMARK 500 O LEU B 146 O HOH B 203 2.07 REMARK 500 O HOH B 258 O HOH B 260 2.07 REMARK 500 O GLY B 54 O HOH B 204 2.09 REMARK 500 O HOH B 244 O HOH B 251 2.11 REMARK 500 O THR B 44 O HOH B 205 2.12 REMARK 500 O ILE B 125 O HOH B 206 2.13 REMARK 500 O HOH A 344 O HOH A 358 2.13 REMARK 500 O HOH A 377 O HOH A 397 2.14 REMARK 500 O HOH B 219 O HOH B 225 2.14 REMARK 500 O HOH A 362 O HOH A 391 2.15 REMARK 500 O HOH B 236 O HOH B 256 2.16 REMARK 500 O HOH A 359 O HOH A 383 2.17 REMARK 500 OE1 GLN A 52 N ILE A 55 2.17 REMARK 500 O HOH B 257 O HOH B 259 2.18 REMARK 500 O GLY B 54 O HOH B 207 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 146 156.61 177.76 REMARK 500 SER A 188 -93.59 -36.54 REMARK 500 LEU A 189 70.97 64.77 REMARK 500 THR B 29 -159.25 -139.42 REMARK 500 VAL B 47 87.60 -54.97 REMARK 500 ASP B 61 24.49 -153.62 REMARK 500 THR B 121 129.93 -171.67 REMARK 500 VAL B 123 79.75 -110.41 REMARK 500 PRO B 136 176.29 -56.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 261 DISTANCE = 7.23 ANGSTROMS DBREF 5D6H A 1 243 UNP Q6XBY4 Q6XBY4_ACIBA 35 277 DBREF 5D6H B 10 152 UNP Q6XBY7 Q6XBY7_ACIBA 38 180 SEQADV 5D6H ALA B 1 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H VAL B 2 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H THR B 3 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H HIS B 4 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H HIS B 5 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H HIS B 6 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H HIS B 7 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H HIS B 8 UNP Q6XBY7 EXPRESSION TAG SEQADV 5D6H HIS B 9 UNP Q6XBY7 EXPRESSION TAG SEQRES 1 A 243 ALA THR PHE LEU ILE TRP PRO ILE TYR PRO LYS ILE GLU SEQRES 2 A 243 ALA ASN GLU LYS ALA THR ALA VAL TRP LEU GLN ASN THR SEQRES 3 A 243 GLY LYS THR ASP ALA MSE VAL GLN ILE ARG VAL PHE LYS SEQRES 4 A 243 TRP ASN GLN ASP GLY LEU LYS ASP ASN TYR SER GLU GLN SEQRES 5 A 243 SER GLU ILE ILE PRO SER PRO PRO VAL ALA LYS ILE LYS SEQRES 6 A 243 ALA GLY GLU LYS HIS MSE LEU ARG LEU THR LYS SER VAL SEQRES 7 A 243 ASN LEU PRO ASP GLY LYS GLU GLN SER TYR ARG LEU ILE SEQRES 8 A 243 VAL ASP GLU LEU PRO ILE ARG LEU SER ASP GLY ASN GLU SEQRES 9 A 243 GLN ASP ALA SER LYS VAL SER PHE GLN MSE ARG TYR SER SEQRES 10 A 243 ILE PRO LEU PHE ALA TYR GLY LYS GLY ILE GLY SER GLY SEQRES 11 A 243 LEU THR GLU GLU SER GLN LYS LEU ASN ALA LYS ASN ALA SEQRES 12 A 243 LEU ALA LYS PRO VAL LEU GLN TRP SER VAL ARG ASN ASN SEQRES 13 A 243 GLN GLN GLY GLN SER GLU LEU TYR LEU LYS ASN ASN GLY SEQRES 14 A 243 GLN LYS PHE ALA ARG LEU SER ALA LEU LYS THR SER LYS SEQRES 15 A 243 THR GLY ASN ASP ILE SER LEU GLY LYS ALA ALA PHE GLY SEQRES 16 A 243 TYR VAL LEU SER ASN SER THR VAL LYS PHE ALA ILE ASP SEQRES 17 A 243 GLN SER THR ALA HIS GLU LEU ALA LYS THR SER LYS ILE SEQRES 18 A 243 TYR GLY VAL ASP SER SER GLY ILE LYS GLN GLU LEU ILE SEQRES 19 A 243 GLU ILE THR LYS MSE GLU ASP PRO SER SEQRES 1 B 152 ALA VAL THR HIS HIS HIS HIS HIS HIS SER THR GLY CYS SEQRES 2 B 152 THR VAL GLY GLY SER GLN THR GLU GLY ASN MET ASN LYS SEQRES 3 B 152 PHE GLY THR LEU ASN PHE GLY LYS THR SER GLY THR TRP SEQRES 4 B 152 ASN ASN VAL LEU THR ALA GLU VAL ALA SER ALA ALA THR SEQRES 5 B 152 GLY GLY ASN ILE SER VAL THR CYS ASP GLY THR ASP PRO SEQRES 6 B 152 VAL ASP PHE THR VAL ALA ILE ASP GLY GLY GLU ARG THR SEQRES 7 B 152 ASP ARG THR LEU LYS ASN THR ALA SER ALA ASP VAL VAL SEQRES 8 B 152 ALA TYR ASN VAL TYR ARG ASP ALA ALA ARG THR ASN LEU SEQRES 9 B 152 TYR VAL VAL ASN GLN PRO GLN GLN PHE THR THR VAL SER SEQRES 10 B 152 GLY GLN ALA THR ALA VAL PRO ILE PHE GLY ALA ILE ALA SEQRES 11 B 152 PRO ASN THR GLY THR PRO LYS ALA GLN GLY ASP TYR LYS SEQRES 12 B 152 ASP THR LEU LEU VAL THR VAL ASN PHE MODRES 5D6H MSE A 32 MET MODIFIED RESIDUE MODRES 5D6H MSE A 71 MET MODIFIED RESIDUE MODRES 5D6H MSE A 114 MET MODIFIED RESIDUE MODRES 5D6H MSE A 239 MET MODIFIED RESIDUE HET MSE A 32 8 HET MSE A 71 8 HET MSE A 114 8 HET MSE A 239 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *158(H2 O) HELIX 1 1 ASP A 43 LEU A 45 5 3 HELIX 2 2 GLU A 133 LYS A 141 1 9 HELIX 3 3 GLN A 209 ALA A 216 1 8 SHEET 1 A 2 PHE A 3 TRP A 6 0 SHEET 2 A 2 TRP A 22 ASN A 25 -1 SHEET 1 B 5 TYR A 9 ILE A 12 0 SHEET 2 B 5 TYR A 116 TYR A 123 1 SHEET 3 B 5 GLU A 85 ASP A 93 -1 SHEET 4 B 5 GLN A 34 ASN A 41 -1 SHEET 5 B 5 ASN A 48 SER A 50 -1 SHEET 1 C 3 ALA A 18 ALA A 20 0 SHEET 2 C 3 ARG A 73 LYS A 76 -1 SHEET 3 C 3 ILE A 55 SER A 58 -1 SHEET 1 D 3 LEU A 149 ARG A 154 0 SHEET 2 D 3 GLU A 162 ASN A 167 -1 SHEET 3 D 3 SER A 201 ALA A 206 -1 SHEET 1 E 3 GLU A 232 THR A 237 0 SHEET 2 E 3 LYS A 220 ASP A 225 -1 SHEET 3 E 3 LEU A 175 LYS A 179 -1 SHEET 1 F 3 ALA B 51 GLY B 53 0 SHEET 2 F 3 PHE B 126 ALA B 128 -1 SHEET 3 F 3 ASN B 94 TYR B 96 -1 SHEET 1 G 3 GLN B 111 PHE B 113 0 SHEET 2 G 3 PHE B 68 ILE B 72 -1 SHEET 3 G 3 VAL B 148 ASN B 151 -1 SSBOND 1 CYS B 13 CYS B 60 1555 1555 2.07 LINK C ALA A 31 N MSE A 32 1555 1555 1.32 LINK C MSE A 32 N VAL A 33 1555 1555 1.33 LINK C HIS A 70 N MSE A 71 1555 1555 1.32 LINK C MSE A 71 N LEU A 72 1555 1555 1.33 LINK C GLN A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N ARG A 115 1555 1555 1.33 LINK C LYS A 238 N MSE A 239 1555 1555 1.33 CISPEP 1 TRP A 6 PRO A 7 0 -9.77 CISPEP 2 SER A 58 PRO A 59 0 3.53 CISPEP 3 GLY B 16 GLY B 17 0 -1.51 CRYST1 94.705 94.705 187.048 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010559 0.006096 0.000000 0.00000 SCALE2 0.000000 0.012193 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005346 0.00000