data_5DA6 # _entry.id 5DA6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DA6 pdb_00005da6 10.2210/pdb5da6/pdb WWPDB D_1000212913 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-04-13 2 'Structure model' 1 1 2017-09-27 3 'Structure model' 1 2 2019-12-11 4 'Structure model' 1 3 2019-12-25 5 'Structure model' 1 4 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 2 'Structure model' pdbx_struct_oper_list 3 3 'Structure model' pdbx_audit_support 4 3 'Structure model' pdbx_struct_special_symmetry 5 4 'Structure model' citation 6 4 'Structure model' citation_author 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' database_2 10 5 'Structure model' pdbx_struct_conn_angle 11 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 3 3 'Structure model' '_pdbx_audit_support.funding_organization' 4 4 'Structure model' '_citation.country' 5 4 'Structure model' '_citation.journal_abbrev' 6 4 'Structure model' '_citation.journal_id_ASTM' 7 4 'Structure model' '_citation.journal_id_ISSN' 8 4 'Structure model' '_citation.page_last' 9 4 'Structure model' '_citation.pdbx_database_id_PubMed' 10 4 'Structure model' '_citation.title' 11 4 'Structure model' '_citation_author.name' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 28 5 'Structure model' '_pdbx_struct_conn_angle.value' 29 5 'Structure model' '_struct_conn.pdbx_dist_value' 30 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 31 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 32 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 33 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 38 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 39 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 41 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 42 5 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DA6 _pdbx_database_status.recvd_initial_deposition_date 2015-08-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Different RNA from 5D99 but part of the same direct methods phasing experiments.' _pdbx_database_related.db_id 5D99 _pdbx_database_related.content_type unspecified # _audit_author.name 'Mooers, B.H.M.' _audit_author.pdbx_ordinal 1 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr D Struct Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2059-7983 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 72 _citation.language ? _citation.page_first 477 _citation.page_last 487 _citation.title 'Direct-methods structure determination of a trypanosome RNA-editing substrate fragment with translational pseudosymmetry.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2059798316001224 _citation.pdbx_database_id_PubMed 27050127 _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Mooers, B.H.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (32-MER)' 10216.987 1 ? ? ? AGAGAAGAAAGGGAAAUUUUUUUUUUUUUUUU 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 water nat water 18.015 236 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AGAGAAGAAAGGGAAAUUUUUUUUUUUUUUUU _entity_poly.pdbx_seq_one_letter_code_can AGAGAAGAAAGGGAAAUUUUUUUUUUUUUUUU _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 G n 1 3 A n 1 4 G n 1 5 A n 1 6 A n 1 7 G n 1 8 A n 1 9 A n 1 10 A n 1 11 G n 1 12 G n 1 13 G n 1 14 A n 1 15 A n 1 16 A n 1 17 U n 1 18 U n 1 19 U n 1 20 U n 1 21 U n 1 22 U n 1 23 U n 1 24 U n 1 25 U n 1 26 U n 1 27 U n 1 28 U n 1 29 U n 1 30 U n 1 31 U n 1 32 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 32 _pdbx_entity_src_syn.organism_scientific 'Trypanosoma brucei' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 5691 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 1 1 A A A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 A 5 5 5 A A A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 A 9 9 9 A A A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 G 13 13 13 G G A . n A 1 14 A 14 14 14 A A A . n A 1 15 A 15 15 15 A A A . n A 1 16 A 16 16 16 A A A . n A 1 17 U 17 17 17 U U A . n A 1 18 U 18 18 18 U U A . n A 1 19 U 19 19 19 U U A . n A 1 20 U 20 20 20 U U A . n A 1 21 U 21 21 21 U U A . n A 1 22 U 22 22 22 U U A . n A 1 23 U 23 23 23 U U A . n A 1 24 U 24 24 24 U U A . n A 1 25 U 25 25 25 U U A . n A 1 26 U 26 26 26 U U A . n A 1 27 U 27 27 27 U U A . n A 1 28 U 28 28 28 U U A . n A 1 29 U 29 29 29 U U A . n A 1 30 U 30 30 30 U U A . n A 1 31 U 31 31 31 U U A . n A 1 32 U 32 32 32 U U A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 101 101 K K A . C 3 HOH 1 201 202 HOH HOH A . C 3 HOH 2 202 203 HOH HOH A . C 3 HOH 3 203 204 HOH HOH A . C 3 HOH 4 204 206 HOH HOH A . C 3 HOH 5 205 207 HOH HOH A . C 3 HOH 6 206 211 HOH HOH A . C 3 HOH 7 207 212 HOH HOH A . C 3 HOH 8 208 208 HOH HOH A . C 3 HOH 9 209 210 HOH HOH A . C 3 HOH 10 210 217 HOH HOH A . C 3 HOH 11 211 213 HOH HOH A . C 3 HOH 12 212 218 HOH HOH A . C 3 HOH 13 213 216 HOH HOH A . C 3 HOH 14 214 232 HOH HOH A . C 3 HOH 15 215 222 HOH HOH A . C 3 HOH 16 216 219 HOH HOH A . C 3 HOH 17 217 209 HOH HOH A . C 3 HOH 18 218 223 HOH HOH A . C 3 HOH 19 219 225 HOH HOH A . C 3 HOH 20 220 220 HOH HOH A . C 3 HOH 21 221 221 HOH HOH A . C 3 HOH 22 222 226 HOH HOH A . C 3 HOH 23 223 214 HOH HOH A . C 3 HOH 24 224 215 HOH HOH A . C 3 HOH 25 225 399 HOH HOH A . C 3 HOH 26 226 233 HOH HOH A . C 3 HOH 27 227 230 HOH HOH A . C 3 HOH 28 228 240 HOH HOH A . C 3 HOH 29 229 224 HOH HOH A . C 3 HOH 30 230 227 HOH HOH A . C 3 HOH 31 231 241 HOH HOH A . C 3 HOH 32 232 234 HOH HOH A . C 3 HOH 33 233 231 HOH HOH A . C 3 HOH 34 234 228 HOH HOH A . C 3 HOH 35 235 229 HOH HOH A . C 3 HOH 36 236 326 HOH HOH A . C 3 HOH 37 237 235 HOH HOH A . C 3 HOH 38 238 239 HOH HOH A . C 3 HOH 39 239 243 HOH HOH A . C 3 HOH 40 240 238 HOH HOH A . C 3 HOH 41 241 246 HOH HOH A . C 3 HOH 42 242 332 HOH HOH A . C 3 HOH 43 243 237 HOH HOH A . C 3 HOH 44 244 284 HOH HOH A . C 3 HOH 45 245 242 HOH HOH A . C 3 HOH 46 246 244 HOH HOH A . C 3 HOH 47 247 249 HOH HOH A . C 3 HOH 48 248 248 HOH HOH A . C 3 HOH 49 249 253 HOH HOH A . C 3 HOH 50 250 269 HOH HOH A . C 3 HOH 51 251 258 HOH HOH A . C 3 HOH 52 252 236 HOH HOH A . C 3 HOH 53 253 254 HOH HOH A . C 3 HOH 54 254 251 HOH HOH A . C 3 HOH 55 255 256 HOH HOH A . C 3 HOH 56 256 266 HOH HOH A . C 3 HOH 57 257 250 HOH HOH A . C 3 HOH 58 258 247 HOH HOH A . C 3 HOH 59 259 252 HOH HOH A . C 3 HOH 60 260 263 HOH HOH A . C 3 HOH 61 261 276 HOH HOH A . C 3 HOH 62 262 257 HOH HOH A . C 3 HOH 63 263 259 HOH HOH A . C 3 HOH 64 264 255 HOH HOH A . C 3 HOH 65 265 262 HOH HOH A . C 3 HOH 66 266 265 HOH HOH A . C 3 HOH 67 267 290 HOH HOH A . C 3 HOH 68 268 260 HOH HOH A . C 3 HOH 69 269 295 HOH HOH A . C 3 HOH 70 270 264 HOH HOH A . C 3 HOH 71 271 268 HOH HOH A . C 3 HOH 72 272 273 HOH HOH A . C 3 HOH 73 273 261 HOH HOH A . C 3 HOH 74 274 278 HOH HOH A . C 3 HOH 75 275 245 HOH HOH A . C 3 HOH 76 276 270 HOH HOH A . C 3 HOH 77 277 289 HOH HOH A . C 3 HOH 78 278 271 HOH HOH A . C 3 HOH 79 279 281 HOH HOH A . C 3 HOH 80 280 267 HOH HOH A . C 3 HOH 81 281 279 HOH HOH A . C 3 HOH 82 282 280 HOH HOH A . C 3 HOH 83 283 272 HOH HOH A . C 3 HOH 84 284 285 HOH HOH A . C 3 HOH 85 285 282 HOH HOH A . C 3 HOH 86 286 274 HOH HOH A . C 3 HOH 87 287 288 HOH HOH A . C 3 HOH 88 288 301 HOH HOH A . C 3 HOH 89 289 308 HOH HOH A . C 3 HOH 90 290 293 HOH HOH A . C 3 HOH 91 291 286 HOH HOH A . C 3 HOH 92 292 298 HOH HOH A . C 3 HOH 93 293 294 HOH HOH A . C 3 HOH 94 294 275 HOH HOH A . C 3 HOH 95 295 291 HOH HOH A . C 3 HOH 96 296 297 HOH HOH A . C 3 HOH 97 297 292 HOH HOH A . C 3 HOH 98 298 300 HOH HOH A . C 3 HOH 99 299 303 HOH HOH A . C 3 HOH 100 300 311 HOH HOH A . C 3 HOH 101 301 310 HOH HOH A . C 3 HOH 102 302 304 HOH HOH A . C 3 HOH 103 303 305 HOH HOH A . C 3 HOH 104 304 299 HOH HOH A . C 3 HOH 105 305 334 HOH HOH A . C 3 HOH 106 306 327 HOH HOH A . C 3 HOH 107 307 329 HOH HOH A . C 3 HOH 108 308 302 HOH HOH A . C 3 HOH 109 309 309 HOH HOH A . C 3 HOH 110 310 307 HOH HOH A . C 3 HOH 111 311 319 HOH HOH A . C 3 HOH 112 312 312 HOH HOH A . C 3 HOH 113 313 322 HOH HOH A . C 3 HOH 114 314 306 HOH HOH A . C 3 HOH 115 315 314 HOH HOH A . C 3 HOH 116 316 317 HOH HOH A . C 3 HOH 117 317 325 HOH HOH A . C 3 HOH 118 318 316 HOH HOH A . C 3 HOH 119 319 324 HOH HOH A . C 3 HOH 120 320 321 HOH HOH A . C 3 HOH 121 321 328 HOH HOH A . C 3 HOH 122 322 323 HOH HOH A . C 3 HOH 123 323 330 HOH HOH A . C 3 HOH 124 324 313 HOH HOH A . C 3 HOH 125 325 331 HOH HOH A . C 3 HOH 126 326 296 HOH HOH A . C 3 HOH 127 327 346 HOH HOH A . C 3 HOH 128 328 320 HOH HOH A . C 3 HOH 129 329 333 HOH HOH A . C 3 HOH 130 330 357 HOH HOH A . C 3 HOH 131 331 341 HOH HOH A . C 3 HOH 132 332 335 HOH HOH A . C 3 HOH 133 333 343 HOH HOH A . C 3 HOH 134 334 338 HOH HOH A . C 3 HOH 135 335 340 HOH HOH A . C 3 HOH 136 336 336 HOH HOH A . C 3 HOH 137 337 315 HOH HOH A . C 3 HOH 138 338 337 HOH HOH A . C 3 HOH 139 339 339 HOH HOH A . C 3 HOH 140 340 318 HOH HOH A . C 3 HOH 141 341 345 HOH HOH A . C 3 HOH 142 342 348 HOH HOH A . C 3 HOH 143 343 356 HOH HOH A . C 3 HOH 144 344 344 HOH HOH A . C 3 HOH 145 345 355 HOH HOH A . C 3 HOH 146 346 350 HOH HOH A . C 3 HOH 147 347 353 HOH HOH A . C 3 HOH 148 348 358 HOH HOH A . C 3 HOH 149 349 351 HOH HOH A . C 3 HOH 150 350 360 HOH HOH A . C 3 HOH 151 351 347 HOH HOH A . C 3 HOH 152 352 354 HOH HOH A . C 3 HOH 153 353 287 HOH HOH A . C 3 HOH 154 354 375 HOH HOH A . C 3 HOH 155 355 361 HOH HOH A . C 3 HOH 156 356 366 HOH HOH A . C 3 HOH 157 357 363 HOH HOH A . C 3 HOH 158 358 364 HOH HOH A . C 3 HOH 159 359 359 HOH HOH A . C 3 HOH 160 360 352 HOH HOH A . C 3 HOH 161 361 369 HOH HOH A . C 3 HOH 162 362 362 HOH HOH A . C 3 HOH 163 363 371 HOH HOH A . C 3 HOH 164 364 370 HOH HOH A . C 3 HOH 165 365 368 HOH HOH A . C 3 HOH 166 366 365 HOH HOH A . C 3 HOH 167 367 436 HOH HOH A . C 3 HOH 168 368 372 HOH HOH A . C 3 HOH 169 369 374 HOH HOH A . C 3 HOH 170 370 377 HOH HOH A . C 3 HOH 171 371 376 HOH HOH A . C 3 HOH 172 372 373 HOH HOH A . C 3 HOH 173 373 379 HOH HOH A . C 3 HOH 174 374 380 HOH HOH A . C 3 HOH 175 375 367 HOH HOH A . C 3 HOH 176 376 381 HOH HOH A . C 3 HOH 177 377 385 HOH HOH A . C 3 HOH 178 378 382 HOH HOH A . C 3 HOH 179 379 378 HOH HOH A . C 3 HOH 180 380 383 HOH HOH A . C 3 HOH 181 381 384 HOH HOH A . C 3 HOH 182 382 387 HOH HOH A . C 3 HOH 183 383 389 HOH HOH A . C 3 HOH 184 384 390 HOH HOH A . C 3 HOH 185 385 388 HOH HOH A . C 3 HOH 186 386 386 HOH HOH A . C 3 HOH 187 387 393 HOH HOH A . C 3 HOH 188 388 394 HOH HOH A . C 3 HOH 189 389 397 HOH HOH A . C 3 HOH 190 390 400 HOH HOH A . C 3 HOH 191 391 398 HOH HOH A . C 3 HOH 192 392 396 HOH HOH A . C 3 HOH 193 393 401 HOH HOH A . C 3 HOH 194 394 391 HOH HOH A . C 3 HOH 195 395 408 HOH HOH A . C 3 HOH 196 396 402 HOH HOH A . C 3 HOH 197 397 409 HOH HOH A . C 3 HOH 198 398 407 HOH HOH A . C 3 HOH 199 399 404 HOH HOH A . C 3 HOH 200 400 406 HOH HOH A . C 3 HOH 201 401 403 HOH HOH A . C 3 HOH 202 402 411 HOH HOH A . C 3 HOH 203 403 405 HOH HOH A . C 3 HOH 204 404 412 HOH HOH A . C 3 HOH 205 405 410 HOH HOH A . C 3 HOH 206 406 413 HOH HOH A . C 3 HOH 207 407 414 HOH HOH A . C 3 HOH 208 408 415 HOH HOH A . C 3 HOH 209 409 416 HOH HOH A . C 3 HOH 210 410 417 HOH HOH A . C 3 HOH 211 411 419 HOH HOH A . C 3 HOH 212 412 420 HOH HOH A . C 3 HOH 213 413 422 HOH HOH A . C 3 HOH 214 414 423 HOH HOH A . C 3 HOH 215 415 421 HOH HOH A . C 3 HOH 216 416 424 HOH HOH A . C 3 HOH 217 417 425 HOH HOH A . C 3 HOH 218 418 426 HOH HOH A . C 3 HOH 219 419 427 HOH HOH A . C 3 HOH 220 420 428 HOH HOH A . C 3 HOH 221 421 429 HOH HOH A . C 3 HOH 222 422 430 HOH HOH A . C 3 HOH 223 423 432 HOH HOH A . C 3 HOH 224 424 433 HOH HOH A . C 3 HOH 225 425 435 HOH HOH A . C 3 HOH 226 426 434 HOH HOH A . C 3 HOH 227 427 437 HOH HOH A . C 3 HOH 228 428 438 HOH HOH A . C 3 HOH 229 429 439 HOH HOH A . C 3 HOH 230 430 443 HOH HOH A . C 3 HOH 231 431 441 HOH HOH A . C 3 HOH 232 432 442 HOH HOH A . C 3 HOH 233 433 445 HOH HOH A . C 3 HOH 234 434 446 HOH HOH A . C 3 HOH 235 435 447 HOH HOH A . C 3 HOH 236 436 448 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10_2142 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Sir2014 ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.82pre 5 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? Blu-Ice ? ? ? . 6 # _cell.entry_id 5DA6 _cell.length_a 42.890 _cell.length_b 42.890 _cell.length_c 266.936 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DA6 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DA6 _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Lithium sulfate, magnesium chloride, cacodylate' _exptl_crystal_grow.pdbx_pH_range 6.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2009-05-10 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 10.60 _reflns.entry_id 5DA6 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.050 _reflns.d_resolution_low 36.790 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 44942 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.000 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.1000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.05 _reflns_shell.d_res_low 1.11 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.800 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.369 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.10 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5DA6 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 44941 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.789 _refine.ls_d_res_high 1.050 _refine.ls_percent_reflns_obs 99.60 _refine.ls_R_factor_obs 0.1301 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1286 _refine.ls_R_factor_R_free 0.1568 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.20 _refine.ls_number_reflns_R_free 2337 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.09 _refine.pdbx_overall_phase_error 14.66 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 675 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 236 _refine_hist.number_atoms_total 912 _refine_hist.d_res_high 1.050 _refine_hist.d_res_low 36.789 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 853 'X-RAY DIFFRACTION' ? f_angle_d 1.038 ? ? 1328 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 6.261 ? ? 427 'X-RAY DIFFRACTION' ? f_chiral_restr 0.039 ? ? 178 'X-RAY DIFFRACTION' ? f_plane_restr 0.018 ? ? 36 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.0500 1.0714 2437 0.2262 99.00 0.2432 . . 153 . . 'X-RAY DIFFRACTION' . 1.0714 1.0947 2504 0.1816 100.00 0.1911 . . 117 . . 'X-RAY DIFFRACTION' . 1.0947 1.1202 2445 0.1690 99.00 0.1957 . . 122 . . 'X-RAY DIFFRACTION' . 1.1202 1.1482 2476 0.1695 100.00 0.1722 . . 130 . . 'X-RAY DIFFRACTION' . 1.1482 1.1793 2483 0.1395 100.00 0.1460 . . 125 . . 'X-RAY DIFFRACTION' . 1.1793 1.2140 2464 0.1198 100.00 0.1437 . . 152 . . 'X-RAY DIFFRACTION' . 1.2140 1.2532 2452 0.1081 100.00 0.1485 . . 143 . . 'X-RAY DIFFRACTION' . 1.2532 1.2979 2514 0.1117 100.00 0.1147 . . 140 . . 'X-RAY DIFFRACTION' . 1.2979 1.3499 2507 0.1131 100.00 0.1496 . . 114 . . 'X-RAY DIFFRACTION' . 1.3499 1.4114 2488 0.1178 100.00 0.1329 . . 129 . . 'X-RAY DIFFRACTION' . 1.4114 1.4858 2533 0.1100 100.00 0.1433 . . 131 . . 'X-RAY DIFFRACTION' . 1.4858 1.5789 2485 0.1071 100.00 0.1296 . . 154 . . 'X-RAY DIFFRACTION' . 1.5789 1.7008 2474 0.1029 99.00 0.1251 . . 156 . . 'X-RAY DIFFRACTION' . 1.7008 1.8719 2534 0.1043 100.00 0.1258 . . 132 . . 'X-RAY DIFFRACTION' . 1.8719 2.1427 2559 0.1227 100.00 0.1447 . . 145 . . 'X-RAY DIFFRACTION' . 2.1427 2.6995 2552 0.1453 99.00 0.1795 . . 145 . . 'X-RAY DIFFRACTION' . 2.6995 36.8120 2697 0.1394 99.00 0.1801 . . 149 . . # _struct.entry_id 5DA6 _struct.title ;Atomic resolution crystal structure of double-stranded RNA 32 base pairs long determined from random starting phases angles in the presence of pseudo translational symmetry using the direct methods program SIR2014. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DA6 _struct_keywords.text 'RNA editing substrate, double-stranded RNA, direct methods structure determination, pseudo translational symmetry, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.db_code 5DA6 _struct_ref.db_name PDB _struct_ref.details ? _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.seq_align ? _struct_ref.seq_dif ? _struct_ref.pdbx_db_accession 5DA6 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_align_end ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5DA6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 32 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5DA6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 32 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 32 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2920 ? 1 MORE -29 ? 1 'SSA (A^2)' 11450 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 266.9360000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 4 "O3'" A ? ? 1_555 B K . K ? ? A G 4 A K 101 1_555 ? ? ? ? ? ? ? 3.282 ? ? metalc2 metalc ? ? A G 4 "O3'" B ? ? 1_555 B K . K ? ? A G 4 A K 101 1_555 ? ? ? ? ? ? ? 3.107 ? ? metalc3 metalc ? ? A G 4 "O2'" A ? ? 1_555 B K . K ? ? A G 4 A K 101 1_555 ? ? ? ? ? ? ? 2.846 ? ? metalc4 metalc ? ? A G 4 "O2'" B ? ? 1_555 B K . K ? ? A G 4 A K 101 1_555 ? ? ? ? ? ? ? 2.560 ? ? metalc5 metalc ? ? A G 4 "O3'" A ? ? 1_555 B K . K ? ? A G 4 A K 101 2_665 ? ? ? ? ? ? ? 3.267 ? ? metalc6 metalc ? ? A G 4 "O3'" B ? ? 1_555 B K . K ? ? A G 4 A K 101 2_665 ? ? ? ? ? ? ? 3.091 ? ? metalc7 metalc ? ? A G 4 "O2'" A ? ? 1_555 B K . K ? ? A G 4 A K 101 2_665 ? ? ? ? ? ? ? 2.851 ? ? metalc8 metalc ? ? A G 4 "O2'" B ? ? 1_555 B K . K ? ? A G 4 A K 101 2_665 ? ? ? ? ? ? ? 2.583 ? ? metalc9 metalc ? ? B K . K ? ? ? 1_555 C HOH . O ? ? A K 101 A HOH 256 1_555 ? ? ? ? ? ? ? 3.290 ? ? metalc10 metalc ? ? B K . K ? ? ? 1_555 C HOH . O ? ? A K 101 A HOH 256 2_665 ? ? ? ? ? ? ? 3.291 ? ? hydrog1 hydrog ? ? A A 1 N1 A ? ? 1_555 A U 32 N3 ? ? A A 1 A U 32 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A A 1 N6 A ? ? 1_555 A U 32 O4 ? ? A A 1 A U 32 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 2 N1 A ? ? 1_555 A U 31 O2 ? ? A G 2 A U 31 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog4 hydrog ? ? A G 2 O6 A ? ? 1_555 A U 31 N3 ? ? A G 2 A U 31 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A A 3 N1 A ? ? 1_555 A U 30 N3 ? ? A A 3 A U 30 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N6 A ? ? 1_555 A U 30 O4 ? ? A A 3 A U 30 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 4 N1 A ? ? 1_555 A U 29 O2 ? ? A G 4 A U 29 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A G 4 O6 A ? ? 1_555 A U 29 N3 ? ? A G 4 A U 29 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog9 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 28 N3 ? ? A A 5 A U 28 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 28 O4 ? ? A A 5 A U 28 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 27 N3 ? ? A A 6 A U 27 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 27 O4 ? ? A A 6 A U 27 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 7 N1 ? ? ? 1_555 A U 26 O2 ? ? A G 7 A U 26 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? A G 7 O6 ? ? ? 1_555 A U 26 N3 ? ? A G 7 A U 26 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? A A 8 N1 ? ? ? 1_555 A U 25 N3 ? ? A A 8 A U 25 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 25 O4 ? ? A A 8 A U 25 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 9 N1 ? ? ? 1_555 A U 24 N3 ? ? A A 9 A U 24 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 9 N6 ? ? ? 1_555 A U 24 O4 ? ? A A 9 A U 24 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 10 N1 ? ? ? 1_555 A U 23 N3 ? ? A A 10 A U 23 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 10 N6 ? ? ? 1_555 A U 23 O4 ? ? A A 10 A U 23 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 11 N1 ? ? ? 1_555 A U 22 O2 ? ? A G 11 A U 22 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog22 hydrog ? ? A G 11 O6 ? ? ? 1_555 A U 22 N3 ? ? A G 11 A U 22 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog23 hydrog ? ? A G 12 N1 ? ? ? 1_555 A U 21 O2 ? ? A G 12 A U 21 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? A G 12 O6 ? ? ? 1_555 A U 21 N3 ? ? A G 12 A U 21 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? A G 13 N1 ? ? ? 1_555 A U 20 O2 ? ? A G 13 A U 20 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? A G 13 O6 ? ? ? 1_555 A U 20 N3 ? ? A G 13 A U 20 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? A A 14 N1 ? ? ? 1_555 A U 19 N3 ? ? A A 14 A U 19 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A A 14 N6 ? ? ? 1_555 A U 19 O4 ? ? A A 14 A U 19 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A A 15 N1 ? ? ? 1_555 A U 18 N3 ? ? A A 15 A U 18 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 15 N6 ? ? ? 1_555 A U 18 O4 ? ? A A 15 A U 18 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A A 16 N1 ? ? ? 1_555 A U 17 N3 ? ? A A 16 A U 17 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 17 O4 ? ? A A 16 A U 17 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 16 N1 ? ? A U 17 A A 16 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 16 N6 ? ? A U 17 A A 16 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A U 18 N3 ? ? ? 1_555 A A 15 N1 ? ? A U 18 A A 15 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A U 18 O4 ? ? ? 1_555 A A 15 N6 ? ? A U 18 A A 15 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 19 N3 ? ? ? 1_555 A A 14 N1 ? ? A U 19 A A 14 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 19 O4 ? ? ? 1_555 A A 14 N6 ? ? A U 19 A A 14 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 20 N3 ? ? ? 1_555 A G 13 O6 ? ? A U 20 A G 13 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog40 hydrog ? ? A U 20 O2 ? ? ? 1_555 A G 13 N1 ? ? A U 20 A G 13 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog41 hydrog ? ? A U 21 N3 ? ? ? 1_555 A G 12 O6 ? ? A U 21 A G 12 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog42 hydrog ? ? A U 21 O2 ? ? ? 1_555 A G 12 N1 ? ? A U 21 A G 12 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog43 hydrog ? ? A U 22 N3 ? ? ? 1_555 A G 11 O6 ? ? A U 22 A G 11 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog44 hydrog ? ? A U 22 O2 ? ? ? 1_555 A G 11 N1 ? ? A U 22 A G 11 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog45 hydrog ? ? A U 23 N3 ? ? ? 1_555 A A 10 N1 ? ? A U 23 A A 10 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 23 O4 ? ? ? 1_555 A A 10 N6 ? ? A U 23 A A 10 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A U 24 N3 ? ? ? 1_555 A A 9 N1 ? ? A U 24 A A 9 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 24 O4 ? ? ? 1_555 A A 9 N6 ? ? A U 24 A A 9 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 25 N3 ? ? ? 1_555 A A 8 N1 ? ? A U 25 A A 8 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A U 25 O4 ? ? ? 1_555 A A 8 N6 ? ? A U 25 A A 8 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A U 26 N3 ? ? ? 1_555 A G 7 O6 ? ? A U 26 A G 7 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog52 hydrog ? ? A U 26 O2 ? ? ? 1_555 A G 7 N1 ? ? A U 26 A G 7 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog53 hydrog ? ? A U 27 N3 ? ? ? 1_555 A A 6 N1 ? ? A U 27 A A 6 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A U 27 O4 ? ? ? 1_555 A A 6 N6 ? ? A U 27 A A 6 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 5 N1 ? ? A U 28 A A 5 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A U 28 O4 ? ? ? 1_555 A A 5 N6 ? ? A U 28 A A 5 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A U 29 N3 ? ? ? 1_555 A G 4 O6 A ? A U 29 A G 4 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog58 hydrog ? ? A U 29 O2 ? ? ? 1_555 A G 4 N1 B ? A U 29 A G 4 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog59 hydrog ? ? A U 30 N3 ? ? ? 1_555 A A 3 N1 A ? A U 30 A A 3 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A U 30 O4 ? ? ? 1_555 A A 3 N6 A ? A U 30 A A 3 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A U 31 N3 ? ? ? 1_555 A G 2 O6 A ? A U 31 A G 2 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog62 hydrog ? ? A U 31 O2 ? ? ? 1_555 A G 2 N1 A ? A U 31 A G 2 6_556 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog63 hydrog ? ? A U 32 N3 ? ? ? 1_555 A A 1 N1 A ? A U 32 A A 1 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A U 32 O4 ? ? ? 1_555 A A 1 N6 A ? A U 32 A A 1 6_556 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" B A G 4 ? A G 4 ? 1_555 1.4 ? 2 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 52.2 ? 3 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 53.6 ? 4 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 57.4 ? 5 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 58.8 ? 6 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 15.0 ? 7 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" A A G 4 ? A G 4 ? 1_555 0.0 ? 8 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" A A G 4 ? A G 4 ? 1_555 1.4 ? 9 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" A A G 4 ? A G 4 ? 1_555 52.2 ? 10 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" A A G 4 ? A G 4 ? 1_555 57.4 ? 11 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" B A G 4 ? A G 4 ? 1_555 1.4 ? 12 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" B A G 4 ? A G 4 ? 1_555 0.0 ? 13 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" B A G 4 ? A G 4 ? 1_555 53.6 ? 14 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" B A G 4 ? A G 4 ? 1_555 58.8 ? 15 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O3'" B A G 4 ? A G 4 ? 1_555 1.4 ? 16 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 52.2 ? 17 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 53.6 ? 18 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 0.0 ? 19 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 15.0 ? 20 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 52.2 ? 21 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" A A G 4 ? A G 4 ? 1_555 53.6 ? 22 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 57.4 ? 23 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 58.8 ? 24 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 15.0 ? 25 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 0.0 ? 26 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 57.4 ? 27 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 58.8 ? 28 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 "O2'" B A G 4 ? A G 4 ? 1_555 15.0 ? 29 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 82.5 ? 30 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 81.2 ? 31 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 132.3 ? 32 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 128.9 ? 33 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 82.5 ? 34 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 81.2 ? 35 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 132.3 ? 36 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 1_555 128.9 ? 37 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 83.0 ? 38 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 81.7 ? 39 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 133.2 ? 40 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 130.2 ? 41 "O3'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 83.0 ? 42 "O3'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 81.7 ? 43 "O2'" A A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 133.2 ? 44 "O2'" B A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 130.2 ? 45 O ? C HOH . ? A HOH 256 ? 1_555 K ? B K . ? A K 101 ? 1_555 O ? C HOH . ? A HOH 256 ? 2_665 1.6 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id K _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'binding site for residue K A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 G A 4 ? G A 4 . ? 1_555 ? 2 AC1 6 G A 4 ? G A 4 . ? 3_565 ? 3 AC1 6 G A 4 ? G A 4 . ? 2_665 ? 4 AC1 6 A A 5 ? A A 5 . ? 2_665 ? 5 AC1 6 A A 5 ? A A 5 . ? 3_565 ? 6 AC1 6 A A 5 ? A A 5 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 242 ? ? O A HOH 383 ? ? 2.03 2 1 O A HOH 204 ? ? O A HOH 348 ? ? 2.16 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A K 101 ? B K . 2 1 A HOH 256 ? C HOH . 3 1 A HOH 289 ? C HOH . 4 1 A HOH 300 ? C HOH . 5 1 A HOH 323 ? C HOH . 6 1 A HOH 325 ? C HOH . 7 1 A HOH 344 ? C HOH . 8 1 A HOH 352 ? C HOH . 9 1 A HOH 362 ? C HOH . 10 1 A HOH 366 ? C HOH . 11 1 A HOH 368 ? C HOH . 12 1 A HOH 375 ? C HOH . 13 1 A HOH 409 ? C HOH . 14 1 A HOH 412 ? C HOH . 15 1 A HOH 418 ? C HOH . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 436 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.06 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 G OP3 O N N 38 G P P N N 39 G OP1 O N N 40 G OP2 O N N 41 G "O5'" O N N 42 G "C5'" C N N 43 G "C4'" C N R 44 G "O4'" O N N 45 G "C3'" C N S 46 G "O3'" O N N 47 G "C2'" C N R 48 G "O2'" O N N 49 G "C1'" C N R 50 G N9 N Y N 51 G C8 C Y N 52 G N7 N Y N 53 G C5 C Y N 54 G C6 C N N 55 G O6 O N N 56 G N1 N N N 57 G C2 C N N 58 G N2 N N N 59 G N3 N N N 60 G C4 C Y N 61 G HOP3 H N N 62 G HOP2 H N N 63 G "H5'" H N N 64 G "H5''" H N N 65 G "H4'" H N N 66 G "H3'" H N N 67 G "HO3'" H N N 68 G "H2'" H N N 69 G "HO2'" H N N 70 G "H1'" H N N 71 G H8 H N N 72 G H1 H N N 73 G H21 H N N 74 G H22 H N N 75 HOH O O N N 76 HOH H1 H N N 77 HOH H2 H N N 78 K K K N N 79 U OP3 O N N 80 U P P N N 81 U OP1 O N N 82 U OP2 O N N 83 U "O5'" O N N 84 U "C5'" C N N 85 U "C4'" C N R 86 U "O4'" O N N 87 U "C3'" C N S 88 U "O3'" O N N 89 U "C2'" C N R 90 U "O2'" O N N 91 U "C1'" C N R 92 U N1 N N N 93 U C2 C N N 94 U O2 O N N 95 U N3 N N N 96 U C4 C N N 97 U O4 O N N 98 U C5 C N N 99 U C6 C N N 100 U HOP3 H N N 101 U HOP2 H N N 102 U "H5'" H N N 103 U "H5''" H N N 104 U "H4'" H N N 105 U "H3'" H N N 106 U "HO3'" H N N 107 U "H2'" H N N 108 U "HO2'" H N N 109 U "H1'" H N N 110 U H3 H N N 111 U H5 H N N 112 U H6 H N N 113 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 G OP3 P sing N N 40 G OP3 HOP3 sing N N 41 G P OP1 doub N N 42 G P OP2 sing N N 43 G P "O5'" sing N N 44 G OP2 HOP2 sing N N 45 G "O5'" "C5'" sing N N 46 G "C5'" "C4'" sing N N 47 G "C5'" "H5'" sing N N 48 G "C5'" "H5''" sing N N 49 G "C4'" "O4'" sing N N 50 G "C4'" "C3'" sing N N 51 G "C4'" "H4'" sing N N 52 G "O4'" "C1'" sing N N 53 G "C3'" "O3'" sing N N 54 G "C3'" "C2'" sing N N 55 G "C3'" "H3'" sing N N 56 G "O3'" "HO3'" sing N N 57 G "C2'" "O2'" sing N N 58 G "C2'" "C1'" sing N N 59 G "C2'" "H2'" sing N N 60 G "O2'" "HO2'" sing N N 61 G "C1'" N9 sing N N 62 G "C1'" "H1'" sing N N 63 G N9 C8 sing Y N 64 G N9 C4 sing Y N 65 G C8 N7 doub Y N 66 G C8 H8 sing N N 67 G N7 C5 sing Y N 68 G C5 C6 sing N N 69 G C5 C4 doub Y N 70 G C6 O6 doub N N 71 G C6 N1 sing N N 72 G N1 C2 sing N N 73 G N1 H1 sing N N 74 G C2 N2 sing N N 75 G C2 N3 doub N N 76 G N2 H21 sing N N 77 G N2 H22 sing N N 78 G N3 C4 sing N N 79 HOH O H1 sing N N 80 HOH O H2 sing N N 81 U OP3 P sing N N 82 U OP3 HOP3 sing N N 83 U P OP1 doub N N 84 U P OP2 sing N N 85 U P "O5'" sing N N 86 U OP2 HOP2 sing N N 87 U "O5'" "C5'" sing N N 88 U "C5'" "C4'" sing N N 89 U "C5'" "H5'" sing N N 90 U "C5'" "H5''" sing N N 91 U "C4'" "O4'" sing N N 92 U "C4'" "C3'" sing N N 93 U "C4'" "H4'" sing N N 94 U "O4'" "C1'" sing N N 95 U "C3'" "O3'" sing N N 96 U "C3'" "C2'" sing N N 97 U "C3'" "H3'" sing N N 98 U "O3'" "HO3'" sing N N 99 U "C2'" "O2'" sing N N 100 U "C2'" "C1'" sing N N 101 U "C2'" "H2'" sing N N 102 U "O2'" "HO2'" sing N N 103 U "C1'" N1 sing N N 104 U "C1'" "H1'" sing N N 105 U N1 C2 sing N N 106 U N1 C6 sing N N 107 U C2 O2 doub N N 108 U C2 N3 sing N N 109 U N3 C4 sing N N 110 U N3 H3 sing N N 111 U C4 O4 doub N N 112 U C4 C5 sing N N 113 U C5 C6 doub N N 114 U C5 H5 sing N N 115 U C6 H6 sing N N 116 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5DA6 'a-form double helix' 5DA6 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 1 1_555 A U 32 6_556 -0.119 -0.035 -0.403 -15.270 -0.824 4.733 1 A_A1:U32_A A 1 ? A 32 ? 20 1 1 A G 2 1_555 A U 31 6_556 -2.366 -0.416 -0.065 -5.974 -10.759 -1.984 2 A_G2:U31_A A 2 ? A 31 ? 28 1 1 A A 3 1_555 A U 30 6_556 -0.069 -0.107 -0.204 -4.443 -12.828 1.528 3 A_A3:U30_A A 3 ? A 30 ? 20 1 1 A G 4 1_555 A U 29 6_556 -2.235 -0.575 -0.067 -5.592 -14.212 -3.805 4 A_G4:U29_A A 4 ? A 29 ? 28 1 1 A A 5 1_555 A U 28 6_556 0.055 -0.073 -0.063 -1.388 -7.970 0.000 5 A_A5:U28_A A 5 ? A 28 ? 20 1 1 A A 6 1_555 A U 27 6_556 -0.024 -0.156 -0.115 -4.174 -11.429 1.467 6 A_A6:U27_A A 6 ? A 27 ? 20 1 1 A G 7 1_555 A U 26 6_556 -2.323 -0.574 -0.098 -3.377 -9.893 -2.647 7 A_G7:U26_A A 7 ? A 26 ? 28 1 1 A A 8 1_555 A U 25 6_556 0.023 -0.113 -0.156 -1.154 -7.984 1.339 8 A_A8:U25_A A 8 ? A 25 ? 20 1 1 A A 9 1_555 A U 24 6_556 -0.001 -0.062 -0.096 -5.912 -11.932 4.383 9 A_A9:U24_A A 9 ? A 24 ? 20 1 1 A A 10 1_555 A U 23 6_556 -0.024 -0.137 -0.079 -4.743 -12.346 3.083 10 A_A10:U23_A A 10 ? A 23 ? 20 1 1 A G 11 1_555 A U 22 6_556 -2.206 -0.610 -0.161 -5.276 -12.014 -3.282 11 A_G11:U22_A A 11 ? A 22 ? 28 1 1 A G 12 1_555 A U 21 6_556 -2.107 -0.581 -0.191 -6.754 -11.388 -6.875 12 A_G12:U21_A A 12 ? A 21 ? 28 1 1 A G 13 1_555 A U 20 6_556 -2.361 -0.556 -0.101 -4.340 -8.763 -2.017 13 A_G13:U20_A A 13 ? A 20 ? 28 1 1 A A 14 1_555 A U 19 6_556 -0.022 -0.126 -0.182 -1.034 -8.497 2.389 14 A_A14:U19_A A 14 ? A 19 ? 20 1 1 A A 15 1_555 A U 18 6_556 0.073 -0.093 -0.058 -2.605 -12.264 4.549 15 A_A15:U18_A A 15 ? A 18 ? 20 1 1 A A 16 1_555 A U 17 6_556 -0.033 -0.085 -0.007 -2.038 -13.266 2.237 16 A_A16:U17_A A 16 ? A 17 ? 20 1 1 A U 17 1_555 A A 16 6_556 0.033 -0.085 -0.007 2.038 -13.266 2.237 17 A_U17:A16_A A 17 ? A 16 ? 20 1 1 A U 18 1_555 A A 15 6_556 -0.073 -0.093 -0.058 2.605 -12.264 4.549 18 A_U18:A15_A A 18 ? A 15 ? 20 1 1 A U 19 1_555 A A 14 6_556 0.022 -0.126 -0.182 1.034 -8.497 2.389 19 A_U19:A14_A A 19 ? A 14 ? 20 1 1 A U 20 1_555 A G 13 6_556 2.361 -0.556 -0.101 4.340 -8.763 -2.017 20 A_U20:G13_A A 20 ? A 13 ? 28 1 1 A U 21 1_555 A G 12 6_556 2.107 -0.581 -0.191 6.754 -11.389 -6.875 21 A_U21:G12_A A 21 ? A 12 ? 28 1 1 A U 22 1_555 A G 11 6_556 2.206 -0.610 -0.161 5.276 -12.014 -3.282 22 A_U22:G11_A A 22 ? A 11 ? 28 1 1 A U 23 1_555 A A 10 6_556 0.024 -0.137 -0.079 4.743 -12.346 3.082 23 A_U23:A10_A A 23 ? A 10 ? 20 1 1 A U 24 1_555 A A 9 6_556 0.001 -0.062 -0.096 5.912 -11.932 4.383 24 A_U24:A9_A A 24 ? A 9 ? 20 1 1 A U 25 1_555 A A 8 6_556 -0.023 -0.113 -0.156 1.154 -7.984 1.339 25 A_U25:A8_A A 25 ? A 8 ? 20 1 1 A U 26 1_555 A G 7 6_556 2.323 -0.574 -0.098 3.377 -9.893 -2.647 26 A_U26:G7_A A 26 ? A 7 ? 28 1 1 A U 27 1_555 A A 6 6_556 0.024 -0.156 -0.115 4.174 -11.429 1.467 27 A_U27:A6_A A 27 ? A 6 ? 20 1 1 A U 28 1_555 A A 5 6_556 -0.055 -0.073 -0.063 1.388 -7.970 0.000 28 A_U28:A5_A A 28 ? A 5 ? 20 1 1 A U 29 1_555 A G 4 6_556 2.235 -0.575 -0.067 5.592 -14.212 -3.805 29 A_U29:G4_A A 29 ? A 4 ? 28 1 1 A U 30 1_555 A A 3 6_556 0.069 -0.107 -0.204 4.443 -12.828 1.528 30 A_U30:A3_A A 30 ? A 3 ? 20 1 1 A U 31 1_555 A G 2 6_556 2.366 -0.416 -0.065 5.974 -10.759 -1.984 31 A_U31:G2_A A 31 ? A 2 ? 28 1 1 A U 32 1_555 A A 1 6_556 0.119 -0.035 -0.403 15.270 -0.824 4.733 32 A_U32:A1_A A 32 ? A 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 1 1_555 A U 32 6_556 A G 2 1_555 A U 31 6_556 -0.171 -2.215 2.996 -1.529 4.938 18.727 -8.597 -0.121 2.345 14.812 4.588 19.421 1 AA_A1G2:U31U32_AA A 1 ? A 32 ? A 2 ? A 31 ? 1 A G 2 1_555 A U 31 6_556 A A 3 1_555 A U 30 6_556 0.019 -1.292 3.372 0.673 6.465 39.977 -2.592 0.048 3.134 9.381 -0.976 40.481 2 AA_G2A3:U30U31_AA A 2 ? A 31 ? A 3 ? A 30 ? 1 A A 3 1_555 A U 30 6_556 A G 4 1_555 A U 29 6_556 0.568 -2.017 3.170 0.483 11.632 21.163 -7.865 -1.232 1.836 29.013 -1.206 24.122 3 AA_A3G4:U29U30_AA A 3 ? A 30 ? A 4 ? A 29 ? 1 A G 4 1_555 A U 29 6_556 A A 5 1_555 A U 28 6_556 0.045 -1.174 3.206 -0.421 4.927 41.966 -2.114 -0.104 3.055 6.851 0.585 42.244 4 AA_G4A5:U28U29_AA A 4 ? A 29 ? A 5 ? A 28 ? 1 A A 5 1_555 A U 28 6_556 A A 6 1_555 A U 27 6_556 0.186 -1.616 3.345 1.658 5.309 30.925 -3.964 -0.037 3.037 9.856 -3.079 31.409 5 AA_A5A6:U27U28_AA A 5 ? A 28 ? A 6 ? A 27 ? 1 A A 6 1_555 A U 27 6_556 A G 7 1_555 A U 26 6_556 -0.164 -1.906 3.052 -3.210 9.000 24.171 -6.313 -0.374 2.214 20.497 7.310 25.965 6 AA_A6G7:U26U27_AA A 6 ? A 27 ? A 7 ? A 26 ? 1 A G 7 1_555 A U 26 6_556 A A 8 1_555 A U 25 6_556 0.083 -1.270 3.330 -1.297 7.467 39.515 -2.681 -0.266 3.046 10.922 1.897 40.206 7 AA_G7A8:U25U26_AA A 7 ? A 26 ? A 8 ? A 25 ? 1 A A 8 1_555 A U 25 6_556 A A 9 1_555 A U 24 6_556 0.640 -1.628 3.393 2.798 11.556 30.570 -4.800 -0.672 2.665 20.950 -5.072 32.750 8 AA_A8A9:U24U25_AA A 8 ? A 25 ? A 9 ? A 24 ? 1 A A 9 1_555 A U 24 6_556 A A 10 1_555 A U 23 6_556 -0.214 -1.237 3.245 1.283 5.757 32.343 -3.131 0.589 2.976 10.228 -2.279 32.862 9 AA_A9A10:U23U24_AA A 9 ? A 24 ? A 10 ? A 23 ? 1 A A 10 1_555 A U 23 6_556 A G 11 1_555 A U 22 6_556 -0.155 -1.674 3.112 -1.160 9.300 24.362 -5.898 0.072 2.329 21.067 2.627 26.078 10 AA_A10G11:U22U23_AA A 10 ? A 23 ? A 11 ? A 22 ? 1 A G 11 1_555 A U 22 6_556 A G 12 1_555 A U 21 6_556 0.064 -1.789 3.255 -1.926 5.737 32.174 -4.114 -0.429 2.893 10.239 3.438 32.723 11 AA_G11G12:U21U22_AA A 11 ? A 22 ? A 12 ? A 21 ? 1 A G 12 1_555 A U 21 6_556 A G 13 1_555 A U 20 6_556 0.568 -1.900 3.106 -3.517 8.450 32.464 -4.474 -1.477 2.474 14.752 6.140 33.696 12 AA_G12G13:U20U21_AA A 12 ? A 21 ? A 13 ? A 20 ? 1 A G 13 1_555 A U 20 6_556 A A 14 1_555 A U 19 6_556 0.025 -1.339 3.288 -1.085 8.213 39.473 -2.840 -0.155 2.961 12.000 1.586 40.299 13 AA_G13A14:U19U20_AA A 13 ? A 20 ? A 14 ? A 19 ? 1 A A 14 1_555 A U 19 6_556 A A 15 1_555 A U 18 6_556 0.491 -1.374 3.326 2.080 10.718 30.847 -4.215 -0.528 2.735 19.403 -3.765 32.678 14 AA_A14A15:U18U19_AA A 14 ? A 19 ? A 15 ? A 18 ? 1 A A 15 1_555 A U 18 6_556 A A 16 1_555 A U 17 6_556 -0.165 -1.374 3.222 1.106 6.910 32.413 -3.504 0.464 2.869 12.201 -1.954 33.140 15 AA_A15A16:U17U18_AA A 15 ? A 18 ? A 16 ? A 17 ? 1 A A 16 1_555 A U 17 6_556 A U 17 1_555 A A 16 6_556 0.000 -1.460 3.172 0.000 5.190 30.679 -3.649 0.000 2.892 9.722 0.000 31.105 16 AA_A16U17:A16U17_AA A 16 ? A 17 ? A 17 ? A 16 ? 1 A U 17 1_555 A A 16 6_556 A U 18 1_555 A A 15 6_556 0.165 -1.374 3.222 -1.106 6.910 32.413 -3.504 -0.464 2.869 12.201 1.954 33.140 17 AA_U17U18:A15A16_AA A 17 ? A 16 ? A 18 ? A 15 ? 1 A U 18 1_555 A A 15 6_556 A U 19 1_555 A A 14 6_556 -0.491 -1.374 3.326 -2.080 10.718 30.847 -4.215 0.528 2.735 19.403 3.765 32.678 18 AA_U18U19:A14A15_AA A 18 ? A 15 ? A 19 ? A 14 ? 1 A U 19 1_555 A A 14 6_556 A U 20 1_555 A G 13 6_556 -0.025 -1.339 3.288 1.085 8.213 39.473 -2.840 0.155 2.961 12.000 -1.586 40.299 19 AA_U19U20:G13A14_AA A 19 ? A 14 ? A 20 ? A 13 ? 1 A U 20 1_555 A G 13 6_556 A U 21 1_555 A G 12 6_556 -0.568 -1.900 3.106 3.517 8.450 32.464 -4.474 1.477 2.474 14.752 -6.140 33.696 20 AA_U20U21:G12G13_AA A 20 ? A 13 ? A 21 ? A 12 ? 1 A U 21 1_555 A G 12 6_556 A U 22 1_555 A G 11 6_556 -0.064 -1.789 3.255 1.927 5.737 32.174 -4.114 0.429 2.893 10.238 -3.438 32.723 21 AA_U21U22:G11G12_AA A 21 ? A 12 ? A 22 ? A 11 ? 1 A U 22 1_555 A G 11 6_556 A U 23 1_555 A A 10 6_556 0.155 -1.674 3.112 1.160 9.300 24.362 -5.898 -0.072 2.329 21.067 -2.627 26.078 22 AA_U22U23:A10G11_AA A 22 ? A 11 ? A 23 ? A 10 ? 1 A U 23 1_555 A A 10 6_556 A U 24 1_555 A A 9 6_556 0.214 -1.237 3.245 -1.283 5.757 32.343 -3.131 -0.589 2.976 10.228 2.279 32.862 23 AA_U23U24:A9A10_AA A 23 ? A 10 ? A 24 ? A 9 ? 1 A U 24 1_555 A A 9 6_556 A U 25 1_555 A A 8 6_556 -0.640 -1.628 3.393 -2.798 11.556 30.570 -4.800 0.672 2.665 20.950 5.072 32.750 24 AA_U24U25:A8A9_AA A 24 ? A 9 ? A 25 ? A 8 ? 1 A U 25 1_555 A A 8 6_556 A U 26 1_555 A G 7 6_556 -0.083 -1.270 3.330 1.297 7.467 39.515 -2.681 0.266 3.046 10.922 -1.897 40.206 25 AA_U25U26:G7A8_AA A 25 ? A 8 ? A 26 ? A 7 ? 1 A U 26 1_555 A G 7 6_556 A U 27 1_555 A A 6 6_556 0.164 -1.906 3.052 3.210 9.000 24.171 -6.313 0.374 2.214 20.497 -7.310 25.965 26 AA_U26U27:A6G7_AA A 26 ? A 7 ? A 27 ? A 6 ? 1 A U 27 1_555 A A 6 6_556 A U 28 1_555 A A 5 6_556 -0.186 -1.616 3.345 -1.658 5.309 30.925 -3.964 0.037 3.037 9.856 3.079 31.409 27 AA_U27U28:A5A6_AA A 27 ? A 6 ? A 28 ? A 5 ? 1 A U 28 1_555 A A 5 6_556 A U 29 1_555 A G 4 6_556 -0.045 -1.174 3.206 0.421 4.927 41.966 -2.114 0.104 3.055 6.851 -0.585 42.244 28 AA_U28U29:G4A5_AA A 28 ? A 5 ? A 29 ? A 4 ? 1 A U 29 1_555 A G 4 6_556 A U 30 1_555 A A 3 6_556 -0.568 -2.017 3.170 -0.483 11.632 21.163 -7.865 1.232 1.836 29.013 1.206 24.122 29 AA_U29U30:A3G4_AA A 29 ? A 4 ? A 30 ? A 3 ? 1 A U 30 1_555 A A 3 6_556 A U 31 1_555 A G 2 6_556 -0.019 -1.292 3.372 -0.673 6.465 39.977 -2.592 -0.048 3.134 9.381 0.976 40.481 30 AA_U30U31:G2A3_AA A 30 ? A 3 ? A 31 ? A 2 ? 1 A U 31 1_555 A G 2 6_556 A U 32 1_555 A A 1 6_556 0.171 -2.215 2.996 1.529 4.937 18.727 -8.597 0.121 2.345 14.812 -4.588 19.421 31 AA_U31U32:A1G2_AA A 31 ? A 2 ? A 32 ? A 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'R01 AI088011' 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'P20 GM103640' 2 # _atom_sites.entry_id 5DA6 _atom_sites.fract_transf_matrix[1][1] 0.023315 _atom_sites.fract_transf_matrix[1][2] 0.013461 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026922 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003746 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H K LI N O P # loop_