HEADER OXIDOREDUCTASE 19-AUG-15 5DAB TITLE CRYSTAL STRUCTURE OF FTO-IN115 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE FTO; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 33-505; COMPND 5 SYNONYM: FAT MASS AND OBESITY-ASSOCIATED PROTEIN; COMPND 6 EC: 1.14.11.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FTO, KIAA1752; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FAT MASS AND OBESITY ASSOCIATED (FTO) PROTEIN, SMALL MOLECULE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.CHAI,B.ZHOU,W.LIU,Z.HAN,T.NIU REVDAT 2 20-MAR-24 5DAB 1 REMARK LINK REVDAT 1 24-AUG-16 5DAB 0 JRNL AUTH J.CHAI,B.ZHOU,W.LIU,Z.HAN,T.NIU JRNL TITL CRYSTAL STRUCTURE OF FTO-IN115 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_596 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 35064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1745 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.9107 - 4.8021 0.77 2204 122 0.2184 0.2583 REMARK 3 2 4.8021 - 3.8143 0.88 2504 141 0.1792 0.2070 REMARK 3 3 3.8143 - 3.3330 0.97 2768 146 0.1965 0.2131 REMARK 3 4 3.3330 - 3.0286 1.00 2880 149 0.2158 0.2472 REMARK 3 5 3.0286 - 2.8117 1.00 2858 144 0.2089 0.2444 REMARK 3 6 2.8117 - 2.6460 1.00 2857 161 0.2126 0.2243 REMARK 3 7 2.6460 - 2.5136 1.00 2932 142 0.2280 0.2792 REMARK 3 8 2.5136 - 2.4042 1.00 2842 149 0.2347 0.2857 REMARK 3 9 2.4042 - 2.3117 1.00 2864 151 0.2527 0.2965 REMARK 3 10 2.3117 - 2.2320 1.00 2896 148 0.2455 0.3187 REMARK 3 11 2.2320 - 2.1622 1.00 2853 144 0.2661 0.2766 REMARK 3 12 2.1622 - 2.1004 0.99 2861 148 0.2997 0.3431 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 82.16 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.79160 REMARK 3 B22 (A**2) : -7.79160 REMARK 3 B33 (A**2) : 15.58310 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3631 REMARK 3 ANGLE : 0.806 4927 REMARK 3 CHIRALITY : 0.059 530 REMARK 3 PLANARITY : 0.003 638 REMARK 3 DIHEDRAL : 14.730 1359 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESI 27:327 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3142 30.4299 7.7876 REMARK 3 T TENSOR REMARK 3 T11: 0.3168 T22: 0.3604 REMARK 3 T33: 0.3172 T12: -0.0007 REMARK 3 T13: 0.0558 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 3.6769 L22: 2.2415 REMARK 3 L33: 2.7292 L12: -0.9818 REMARK 3 L13: -0.9439 L23: 0.1975 REMARK 3 S TENSOR REMARK 3 S11: 0.0187 S12: -0.5936 S13: 0.2470 REMARK 3 S21: 0.1440 S22: 0.1514 S23: 0.1305 REMARK 3 S31: -0.1430 S32: 0.2921 S33: -0.0986 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESI 328:500 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5258 16.6872 -14.1559 REMARK 3 T TENSOR REMARK 3 T11: 0.5877 T22: 0.6187 REMARK 3 T33: 0.4544 T12: 0.1960 REMARK 3 T13: 0.0957 T23: 0.0456 REMARK 3 L TENSOR REMARK 3 L11: 4.3118 L22: 1.7112 REMARK 3 L33: 1.5665 L12: -2.0217 REMARK 3 L13: -1.5205 L23: 1.4898 REMARK 3 S TENSOR REMARK 3 S11: 0.5625 S12: 0.3535 S13: 0.1317 REMARK 3 S21: -0.4885 S22: -0.4184 S23: -0.3280 REMARK 3 S31: -0.3885 S32: 0.1073 S33: -0.0811 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212917. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PHENIX REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35070 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10%(W/V) POLYETHYLENE GLYCOL (PEG) REMARK 280 3350, 0.1 M TRISODIUM CITRATE DEHYDRATE, 3.0 MM N-OXALYLGLYCINE REMARK 280 (NOG), PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 71.34050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.18846 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.33267 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 71.34050 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 41.18846 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.33267 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 71.34050 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 41.18846 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.33267 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 82.37691 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 54.66533 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 82.37691 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 54.66533 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 82.37691 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 54.66533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 125 REMARK 465 LYS A 126 REMARK 465 HIS A 127 REMARK 465 LYS A 162 REMARK 465 ALA A 163 REMARK 465 ASN A 164 REMARK 465 GLU A 165 REMARK 465 ASP A 166 REMARK 465 ALA A 167 REMARK 465 VAL A 168 REMARK 465 PRO A 169 REMARK 465 LEU A 170 REMARK 465 CYS A 171 REMARK 465 MET A 172 REMARK 465 SER A 173 REMARK 465 ALA A 174 REMARK 465 ASP A 175 REMARK 465 PHE A 176 REMARK 465 PRO A 177 REMARK 465 ARG A 178 REMARK 465 VAL A 179 REMARK 465 GLY A 180 REMARK 465 MET A 181 REMARK 465 GLY A 182 REMARK 465 SER A 183 REMARK 465 SER A 184 REMARK 465 TYR A 185 REMARK 465 ASN A 186 REMARK 465 GLY A 187 REMARK 465 GLU A 250 REMARK 465 GLY A 251 REMARK 465 PRO A 252 REMARK 465 GLU A 253 REMARK 465 GLU A 254 REMARK 465 GLU A 255 REMARK 465 SER A 256 REMARK 465 GLU A 257 REMARK 465 ASP A 258 REMARK 465 ASP A 259 REMARK 465 SER A 260 REMARK 465 LEU A 501 REMARK 465 GLU A 502 REMARK 465 ALA A 503 REMARK 465 LYS A 504 REMARK 465 PRO A 505 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 123 OG REMARK 470 ASN A 124 CG OD1 ND2 REMARK 470 THR A 128 OG1 CG2 REMARK 470 HIS A 261 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 262 CG CD1 CD2 REMARK 470 GLU A 263 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 388 N - CA - C ANGL. DEV. = 17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 46 51.85 -119.39 REMARK 500 ASN A 110 -0.46 71.24 REMARK 500 LYS A 121 158.73 -43.59 REMARK 500 ALA A 130 -68.96 60.84 REMARK 500 ALA A 159 36.71 -89.15 REMARK 500 LEU A 262 -103.22 -145.68 REMARK 500 GLU A 263 -38.64 126.34 REMARK 500 TRP A 278 -10.88 74.72 REMARK 500 ASP A 299 -125.78 53.91 REMARK 500 TRP A 378 -68.88 -121.64 REMARK 500 ARG A 388 -82.13 -176.74 REMARK 500 THR A 393 -65.97 -148.65 REMARK 500 ASP A 394 13.50 82.06 REMARK 500 CYS A 397 -74.31 -47.15 REMARK 500 ARG A 423 131.05 -39.31 REMARK 500 GLN A 468 -87.84 -92.66 REMARK 500 LYS A 469 117.40 16.66 REMARK 500 CYS A 472 48.33 -103.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 610 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 AKG A 611 O5 REMARK 620 2 HOH A 762 O 112.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AKG A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 58W A 612 DBREF 5DAB A 32 505 UNP Q9C0B1 FTO_HUMAN 32 505 SEQADV 5DAB LEU A 27 UNP Q9C0B1 EXPRESSION TAG SEQADV 5DAB GLU A 28 UNP Q9C0B1 EXPRESSION TAG SEQADV 5DAB SER A 29 UNP Q9C0B1 EXPRESSION TAG SEQADV 5DAB HIS A 30 UNP Q9C0B1 EXPRESSION TAG SEQADV 5DAB MET A 31 UNP Q9C0B1 EXPRESSION TAG SEQADV 5DAB ASP A 188 UNP Q9C0B1 GLN 188 CONFLICT SEQADV 5DAB VAL A 189 UNP Q9C0B1 ASP 189 CONFLICT SEQRES 1 A 479 LEU GLU SER HIS MET THR PRO LYS ASP ASP GLU PHE TYR SEQRES 2 A 479 GLN GLN TRP GLN LEU LYS TYR PRO LYS LEU ILE LEU ARG SEQRES 3 A 479 GLU ALA SER SER VAL SER GLU GLU LEU HIS LYS GLU VAL SEQRES 4 A 479 GLN GLU ALA PHE LEU THR LEU HIS LYS HIS GLY CYS LEU SEQRES 5 A 479 PHE ARG ASP LEU VAL ARG ILE GLN GLY LYS ASP LEU LEU SEQRES 6 A 479 THR PRO VAL SER ARG ILE LEU ILE GLY ASN PRO GLY CYS SEQRES 7 A 479 THR TYR LYS TYR LEU ASN THR ARG LEU PHE THR VAL PRO SEQRES 8 A 479 TRP PRO VAL LYS GLY SER ASN ILE LYS HIS THR GLU ALA SEQRES 9 A 479 GLU ILE ALA ALA ALA CYS GLU THR PHE LEU LYS LEU ASN SEQRES 10 A 479 ASP TYR LEU GLN ILE GLU THR ILE GLN ALA LEU GLU GLU SEQRES 11 A 479 LEU ALA ALA LYS GLU LYS ALA ASN GLU ASP ALA VAL PRO SEQRES 12 A 479 LEU CYS MET SER ALA ASP PHE PRO ARG VAL GLY MET GLY SEQRES 13 A 479 SER SER TYR ASN GLY ASP VAL GLU VAL ASP ILE LYS SER SEQRES 14 A 479 ARG ALA ALA TYR ASN VAL THR LEU LEU ASN PHE MET ASP SEQRES 15 A 479 PRO GLN LYS MET PRO TYR LEU LYS GLU GLU PRO TYR PHE SEQRES 16 A 479 GLY MET GLY LYS MET ALA VAL SER TRP HIS HIS ASP GLU SEQRES 17 A 479 ASN LEU VAL ASP ARG SER ALA VAL ALA VAL TYR SER TYR SEQRES 18 A 479 SER CYS GLU GLY PRO GLU GLU GLU SER GLU ASP ASP SER SEQRES 19 A 479 HIS LEU GLU GLY ARG ASP PRO ASP ILE TRP HIS VAL GLY SEQRES 20 A 479 PHE LYS ILE SER TRP ASP ILE GLU THR PRO GLY LEU ALA SEQRES 21 A 479 ILE PRO LEU HIS GLN GLY ASP CYS TYR PHE MET LEU ASP SEQRES 22 A 479 ASP LEU ASN ALA THR HIS GLN HIS CYS VAL LEU ALA GLY SEQRES 23 A 479 SER GLN PRO ARG PHE SER SER THR HIS ARG VAL ALA GLU SEQRES 24 A 479 CYS SER THR GLY THR LEU ASP TYR ILE LEU GLN ARG CYS SEQRES 25 A 479 GLN LEU ALA LEU GLN ASN VAL CYS ASP ASP VAL ASP ASN SEQRES 26 A 479 ASP ASP VAL SER LEU LYS SER PHE GLU PRO ALA VAL LEU SEQRES 27 A 479 LYS GLN GLY GLU GLU ILE HIS ASN GLU VAL GLU PHE GLU SEQRES 28 A 479 TRP LEU ARG GLN PHE TRP PHE GLN GLY ASN ARG TYR ARG SEQRES 29 A 479 LYS CYS THR ASP TRP TRP CYS GLN PRO MET ALA GLN LEU SEQRES 30 A 479 GLU ALA LEU TRP LYS LYS MET GLU GLY VAL THR ASN ALA SEQRES 31 A 479 VAL LEU HIS GLU VAL LYS ARG GLU GLY LEU PRO VAL GLU SEQRES 32 A 479 GLN ARG ASN GLU ILE LEU THR ALA ILE LEU ALA SER LEU SEQRES 33 A 479 THR ALA ARG GLN ASN LEU ARG ARG GLU TRP HIS ALA ARG SEQRES 34 A 479 CYS GLN SER ARG ILE ALA ARG THR LEU PRO ALA ASP GLN SEQRES 35 A 479 LYS PRO GLU CYS ARG PRO TYR TRP GLU LYS ASP ASP ALA SEQRES 36 A 479 SER MET PRO LEU PRO PHE ASP LEU THR ASP ILE VAL SER SEQRES 37 A 479 GLU LEU ARG GLY GLN LEU LEU GLU ALA LYS PRO HET CL A 601 1 HET CL A 602 1 HET CL A 603 1 HET CL A 604 1 HET CL A 605 1 HET CL A 606 1 HET CL A 607 1 HET CL A 608 1 HET CL A 609 1 HET FE2 A 610 1 HET AKG A 611 10 HET 58W A 612 22 HETNAM CL CHLORIDE ION HETNAM FE2 FE (II) ION HETNAM AKG 2-OXOGLUTARIC ACID HETNAM 58W N-(5-CHLORO-2,4-DIHYDROXYPHENYL)-1- HETNAM 2 58W PHENYLCYCLOBUTANECARBOXAMIDE FORMUL 2 CL 9(CL 1-) FORMUL 11 FE2 FE 2+ FORMUL 12 AKG C5 H6 O5 FORMUL 13 58W C17 H16 CL N O3 FORMUL 14 HOH *118(H2 O) HELIX 1 AA1 GLU A 37 TYR A 46 1 10 HELIX 2 AA2 GLU A 53 VAL A 57 5 5 HELIX 3 AA3 SER A 58 HIS A 75 1 18 HELIX 4 AA4 ALA A 130 ALA A 159 1 30 HELIX 5 AA5 VAL A 189 ALA A 198 1 10 HELIX 6 AA6 ASP A 208 MET A 212 5 5 HELIX 7 AA7 ASP A 300 THR A 304 1 5 HELIX 8 AA8 THR A 330 GLN A 343 1 14 HELIX 9 AA9 GLU A 360 TRP A 378 1 19 HELIX 10 AB1 TRP A 378 GLN A 385 1 8 HELIX 11 AB2 TRP A 396 ARG A 423 1 28 HELIX 12 AB3 PRO A 427 SER A 458 1 32 HELIX 13 AB4 LEU A 489 LEU A 500 1 12 SHEET 1 AA1 6 HIS A 30 MET A 31 0 SHEET 2 AA1 6 GLY A 284 PRO A 288 1 O ALA A 286 N MET A 31 SHEET 3 AA1 6 HIS A 271 ILE A 276 -1 N VAL A 272 O ILE A 287 SHEET 4 AA1 6 HIS A 305 LEU A 310 -1 O LEU A 310 N HIS A 271 SHEET 5 AA1 6 LYS A 225 HIS A 231 -1 N ALA A 227 O VAL A 309 SHEET 6 AA1 6 LYS A 216 GLU A 217 -1 N LYS A 216 O MET A 226 SHEET 1 AA2 7 LEU A 49 ARG A 52 0 SHEET 2 AA2 7 CYS A 294 MET A 297 -1 O CYS A 294 N ARG A 52 SHEET 3 AA2 7 VAL A 242 SER A 248 -1 N VAL A 244 O TYR A 295 SHEET 4 AA2 7 ARG A 316 ARG A 322 -1 O PHE A 317 N TYR A 247 SHEET 5 AA2 7 VAL A 201 MET A 207 -1 N VAL A 201 O ARG A 322 SHEET 6 AA2 7 SER A 95 GLY A 100 -1 N ILE A 99 O THR A 202 SHEET 7 AA2 7 VAL A 116 PRO A 117 1 O VAL A 116 N LEU A 98 SHEET 1 AA3 2 LEU A 82 ILE A 85 0 SHEET 2 AA3 2 LYS A 88 LEU A 91 -1 O LYS A 88 N ILE A 85 SHEET 1 AA4 2 THR A 105 TYR A 108 0 SHEET 2 AA4 2 THR A 111 PHE A 114 -1 O THR A 111 N TYR A 108 LINK FE FE2 A 610 O5 AKG A 611 1555 1555 2.56 LINK FE FE2 A 610 O HOH A 762 1555 1555 2.61 CISPEP 1 ARG A 473 PRO A 474 0 -3.26 SITE 1 AC1 5 LYS A 45 TYR A 46 PRO A 47 LYS A 48 SITE 2 AC1 5 LEU A 301 SITE 1 AC2 1 TRP A 278 SITE 1 AC3 1 LEU A 406 SITE 1 AC4 1 TYR A 199 SITE 1 AC5 1 CYS A 249 SITE 1 AC6 4 HIS A 231 HIS A 307 AKG A 611 HOH A 762 SITE 1 AC7 14 ARG A 96 TYR A 108 ASN A 205 VAL A 228 SITE 2 AC7 14 VAL A 244 TYR A 295 VAL A 309 ARG A 316 SITE 3 AC7 14 SER A 318 THR A 320 FE2 A 610 HOH A 719 SITE 4 AC7 14 HOH A 756 HOH A 762 SITE 1 AC8 12 TYR A 39 ILE A 85 LEU A 90 LEU A 91 SITE 2 AC8 12 THR A 92 PRO A 93 LEU A 215 LYS A 216 SITE 3 AC8 12 MET A 226 ALA A 227 SER A 229 HOH A 722 CRYST1 142.681 142.681 81.998 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007009 0.004046 0.000000 0.00000 SCALE2 0.000000 0.008093 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012195 0.00000