HEADER SIGNALING PROTEIN 24-AUG-15 5DCM TITLE STRUCTURE OF A LANTIBIOTIC RESPONSE REGULATOR: C-TERMINAL DOMAIN OF TITLE 2 THE NISIN RESISTANCE REGULATOR NSRR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOB FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PHOB FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE; SOURCE 3 ORGANISM_TAXID: 1311; SOURCE 4 GENE: DK41_05180, EN72_05470; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE; SOURCE 9 ORGANISM_TAXID: 1311; SOURCE 10 GENE: DK41_05180, EN72_05470; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTIMICROBIAL PEPTIDE, LANTIBIOTIC, NISIN, RESISTANCE/REGULATION, TWO KEYWDS 2 COMPONENT SYSTEM, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KHOSA,D.KLEINSCHRODT,A.HOEPPNER,S.H.J.SMITS REVDAT 2 08-MAY-24 5DCM 1 ATOM REVDAT 1 06-JUL-16 5DCM 0 JRNL AUTH S.KHOSA,A.HOEPPNER,H.GOHLKE,L.SCHMITT,S.H.SMITS JRNL TITL STRUCTURE OF THE RESPONSE REGULATOR NSRR FROM STREPTOCOCCUS JRNL TITL 2 AGALACTIAE, WHICH IS INVOLVED IN LANTIBIOTIC RESISTANCE. JRNL REF PLOS ONE V. 11 49903 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 26930060 JRNL DOI 10.1371/JOURNAL.PONE.0149903 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 49037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.630 REMARK 3 FREE R VALUE TEST SET COUNT : 3740 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.8859 - 4.7995 1.00 1703 132 0.1869 0.2109 REMARK 3 2 4.7995 - 3.8098 1.00 1683 138 0.1463 0.1769 REMARK 3 3 3.8098 - 3.3283 0.97 1637 145 0.1742 0.1922 REMARK 3 4 3.3283 - 3.0240 0.99 1703 144 0.1868 0.1858 REMARK 3 5 3.0240 - 2.8072 0.99 1684 130 0.1901 0.2990 REMARK 3 6 2.8072 - 2.6417 1.00 1669 145 0.1891 0.2077 REMARK 3 7 2.6417 - 2.5094 1.00 1678 139 0.1859 0.2295 REMARK 3 8 2.5094 - 2.4002 1.00 1728 148 0.1949 0.2110 REMARK 3 9 2.4002 - 2.3078 1.00 1674 151 0.1861 0.2261 REMARK 3 10 2.3078 - 2.2282 0.99 1649 143 0.1917 0.2599 REMARK 3 11 2.2282 - 2.1585 0.99 1700 126 0.1927 0.2392 REMARK 3 12 2.1585 - 2.0968 0.99 1691 139 0.1812 0.2190 REMARK 3 13 2.0968 - 2.0416 0.98 1640 153 0.1881 0.2417 REMARK 3 14 2.0416 - 1.9918 0.97 1654 142 0.1912 0.2047 REMARK 3 15 1.9918 - 1.9465 0.97 1658 104 0.1797 0.2611 REMARK 3 16 1.9465 - 1.9051 0.98 1639 156 0.1971 0.2258 REMARK 3 17 1.9051 - 1.8669 0.98 1678 135 0.2043 0.2172 REMARK 3 18 1.8669 - 1.8317 0.99 1670 114 0.2125 0.1848 REMARK 3 19 1.8317 - 1.7990 0.99 1697 152 0.2060 0.2355 REMARK 3 20 1.7990 - 1.7685 0.99 1657 126 0.2157 0.2552 REMARK 3 21 1.7685 - 1.7400 0.99 1699 144 0.2063 0.2813 REMARK 3 22 1.7400 - 1.7132 1.00 1655 144 0.2235 0.1994 REMARK 3 23 1.7132 - 1.6880 0.99 1703 142 0.2099 0.2737 REMARK 3 24 1.6880 - 1.6642 1.00 1643 166 0.2254 0.2236 REMARK 3 25 1.6642 - 1.6417 0.99 1738 123 0.2241 0.2455 REMARK 3 26 1.6417 - 1.6204 0.99 1656 129 0.2171 0.2706 REMARK 3 27 1.6204 - 1.6002 0.99 1711 130 0.2351 0.2535 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1576 REMARK 3 ANGLE : 1.090 2129 REMARK 3 CHIRALITY : 0.043 255 REMARK 3 PLANARITY : 0.006 266 REMARK 3 DIHEDRAL : 13.286 593 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DCM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000213016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07145 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 124813 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SPG BUFFER PH 8.0 AND 25% (W/V) REMARK 280 PEG 1500, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 28.19000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.23000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.19000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.23000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 369 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 401 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 GLN A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 5 REMARK 465 LYS A 6 REMARK 465 ILE A 7 REMARK 465 TYR A 8 REMARK 465 ILE A 9 REMARK 465 VAL A 10 REMARK 465 GLU A 11 REMARK 465 ASP A 12 REMARK 465 ASP A 13 REMARK 465 MET A 14 REMARK 465 THR A 15 REMARK 465 ILE A 16 REMARK 465 VAL A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 LEU A 20 REMARK 465 LYS A 21 REMARK 465 ASP A 22 REMARK 465 HIS A 23 REMARK 465 LEU A 24 REMARK 465 SER A 25 REMARK 465 ALA A 26 REMARK 465 SER A 27 REMARK 465 TYR A 28 REMARK 465 HIS A 29 REMARK 465 VAL A 30 REMARK 465 SER A 31 REMARK 465 SER A 32 REMARK 465 VAL A 33 REMARK 465 SER A 34 REMARK 465 ASN A 35 REMARK 465 PHE A 36 REMARK 465 ARG A 37 REMARK 465 ASP A 38 REMARK 465 VAL A 39 REMARK 465 LYS A 40 REMARK 465 GLN A 41 REMARK 465 GLU A 42 REMARK 465 ILE A 43 REMARK 465 ILE A 44 REMARK 465 ALA A 45 REMARK 465 PHE A 46 REMARK 465 GLN A 47 REMARK 465 PRO A 48 REMARK 465 ASP A 49 REMARK 465 LEU A 50 REMARK 465 ILE A 51 REMARK 465 LEU A 52 REMARK 465 MET A 53 REMARK 465 ASP A 54 REMARK 465 ILE A 55 REMARK 465 THR A 56 REMARK 465 LEU A 57 REMARK 465 PRO A 58 REMARK 465 TYR A 59 REMARK 465 PHE A 60 REMARK 465 ASN A 61 REMARK 465 GLY A 62 REMARK 465 PHE A 63 REMARK 465 TYR A 64 REMARK 465 TRP A 65 REMARK 465 THR A 66 REMARK 465 ALA A 67 REMARK 465 GLU A 68 REMARK 465 LEU A 69 REMARK 465 ARG A 70 REMARK 465 LYS A 71 REMARK 465 PHE A 72 REMARK 465 LEU A 73 REMARK 465 THR A 74 REMARK 465 ILE A 75 REMARK 465 PRO A 76 REMARK 465 ILE A 77 REMARK 465 ILE A 78 REMARK 465 PHE A 79 REMARK 465 ILE A 80 REMARK 465 SER A 81 REMARK 465 SER A 82 REMARK 465 SER A 83 REMARK 465 ASN A 84 REMARK 465 ASP A 85 REMARK 465 GLU A 86 REMARK 465 MET A 87 REMARK 465 ASP A 88 REMARK 465 MET A 89 REMARK 465 VAL A 90 REMARK 465 MET A 91 REMARK 465 ALA A 92 REMARK 465 LEU A 93 REMARK 465 ASN A 94 REMARK 465 MET A 95 REMARK 465 GLY A 96 REMARK 465 GLY A 97 REMARK 465 ASP A 98 REMARK 465 ASP A 99 REMARK 465 PHE A 100 REMARK 465 ILE A 101 REMARK 465 SER A 102 REMARK 465 LYS A 103 REMARK 465 PRO A 104 REMARK 465 PHE A 105 REMARK 465 SER A 106 REMARK 465 LEU A 107 REMARK 465 ALA A 108 REMARK 465 VAL A 109 REMARK 465 LEU A 110 REMARK 465 ASP A 111 REMARK 465 ALA A 112 REMARK 465 LYS A 113 REMARK 465 LEU A 114 REMARK 465 THR A 115 REMARK 465 ALA A 116 REMARK 465 ILE A 117 REMARK 465 LEU A 118 REMARK 465 ARG A 119 REMARK 465 ARG A 120 REMARK 465 SER A 121 REMARK 465 GLN A 122 REMARK 465 GLN A 123 REMARK 465 PHE A 124 REMARK 465 ILE A 125 REMARK 465 GLN A 126 REMARK 465 GLN A 127 REMARK 465 SER A 225 REMARK 465 SER A 226 REMARK 465 SER A 227 REMARK 465 VAL A 228 REMARK 465 ASP A 229 REMARK 465 LYS A 230 REMARK 465 LEU A 231 REMARK 465 ALA A 232 REMARK 465 ALA A 233 REMARK 465 ALA A 234 REMARK 465 LEU A 235 REMARK 465 GLU A 236 REMARK 465 HIS A 237 REMARK 465 HIS A 238 REMARK 465 HIS A 239 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 HIS A 242 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLN B 2 REMARK 465 GLU B 3 REMARK 465 GLN B 4 REMARK 465 GLY B 5 REMARK 465 LYS B 6 REMARK 465 ILE B 7 REMARK 465 TYR B 8 REMARK 465 ILE B 9 REMARK 465 VAL B 10 REMARK 465 GLU B 11 REMARK 465 ASP B 12 REMARK 465 ASP B 13 REMARK 465 MET B 14 REMARK 465 THR B 15 REMARK 465 ILE B 16 REMARK 465 VAL B 17 REMARK 465 SER B 18 REMARK 465 LEU B 19 REMARK 465 LEU B 20 REMARK 465 LYS B 21 REMARK 465 ASP B 22 REMARK 465 HIS B 23 REMARK 465 LEU B 24 REMARK 465 SER B 25 REMARK 465 ALA B 26 REMARK 465 SER B 27 REMARK 465 TYR B 28 REMARK 465 HIS B 29 REMARK 465 VAL B 30 REMARK 465 SER B 31 REMARK 465 SER B 32 REMARK 465 VAL B 33 REMARK 465 SER B 34 REMARK 465 ASN B 35 REMARK 465 PHE B 36 REMARK 465 ARG B 37 REMARK 465 ASP B 38 REMARK 465 VAL B 39 REMARK 465 LYS B 40 REMARK 465 GLN B 41 REMARK 465 GLU B 42 REMARK 465 ILE B 43 REMARK 465 ILE B 44 REMARK 465 ALA B 45 REMARK 465 PHE B 46 REMARK 465 GLN B 47 REMARK 465 PRO B 48 REMARK 465 ASP B 49 REMARK 465 LEU B 50 REMARK 465 ILE B 51 REMARK 465 LEU B 52 REMARK 465 MET B 53 REMARK 465 ASP B 54 REMARK 465 ILE B 55 REMARK 465 THR B 56 REMARK 465 LEU B 57 REMARK 465 PRO B 58 REMARK 465 TYR B 59 REMARK 465 PHE B 60 REMARK 465 ASN B 61 REMARK 465 GLY B 62 REMARK 465 PHE B 63 REMARK 465 TYR B 64 REMARK 465 TRP B 65 REMARK 465 THR B 66 REMARK 465 ALA B 67 REMARK 465 GLU B 68 REMARK 465 LEU B 69 REMARK 465 ARG B 70 REMARK 465 LYS B 71 REMARK 465 PHE B 72 REMARK 465 LEU B 73 REMARK 465 THR B 74 REMARK 465 ILE B 75 REMARK 465 PRO B 76 REMARK 465 ILE B 77 REMARK 465 ILE B 78 REMARK 465 PHE B 79 REMARK 465 ILE B 80 REMARK 465 SER B 81 REMARK 465 SER B 82 REMARK 465 SER B 83 REMARK 465 ASN B 84 REMARK 465 ASP B 85 REMARK 465 GLU B 86 REMARK 465 MET B 87 REMARK 465 ASP B 88 REMARK 465 MET B 89 REMARK 465 VAL B 90 REMARK 465 MET B 91 REMARK 465 ALA B 92 REMARK 465 LEU B 93 REMARK 465 ASN B 94 REMARK 465 MET B 95 REMARK 465 GLY B 96 REMARK 465 GLY B 97 REMARK 465 ASP B 98 REMARK 465 ASP B 99 REMARK 465 PHE B 100 REMARK 465 ILE B 101 REMARK 465 SER B 102 REMARK 465 LYS B 103 REMARK 465 PRO B 104 REMARK 465 PHE B 105 REMARK 465 SER B 106 REMARK 465 LEU B 107 REMARK 465 ALA B 108 REMARK 465 VAL B 109 REMARK 465 LEU B 110 REMARK 465 ASP B 111 REMARK 465 ALA B 112 REMARK 465 LYS B 113 REMARK 465 LEU B 114 REMARK 465 THR B 115 REMARK 465 ALA B 116 REMARK 465 ILE B 117 REMARK 465 LEU B 118 REMARK 465 ARG B 119 REMARK 465 ARG B 120 REMARK 465 SER B 121 REMARK 465 GLN B 122 REMARK 465 GLN B 123 REMARK 465 PHE B 124 REMARK 465 ILE B 125 REMARK 465 GLN B 126 REMARK 465 SER B 225 REMARK 465 SER B 226 REMARK 465 SER B 227 REMARK 465 VAL B 228 REMARK 465 ASP B 229 REMARK 465 LYS B 230 REMARK 465 LEU B 231 REMARK 465 ALA B 232 REMARK 465 ALA B 233 REMARK 465 ALA B 234 REMARK 465 LEU B 235 REMARK 465 GLU B 236 REMARK 465 HIS B 237 REMARK 465 HIS B 238 REMARK 465 HIS B 239 REMARK 465 HIS B 240 REMARK 465 HIS B 241 REMARK 465 HIS B 242 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 146 CG OD1 OD2 REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 GLU B 173 CG CD OE1 OE2 REMARK 470 ARG B 214 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 325 O HOH A 374 1.88 REMARK 500 O HOH A 306 O HOH A 433 1.89 REMARK 500 O HOH B 389 O HOH B 415 2.02 REMARK 500 O HOH B 440 O HOH B 441 2.05 REMARK 500 O HOH A 325 O HOH A 413 2.05 REMARK 500 O HOH B 400 O HOH B 440 2.07 REMARK 500 O HOH B 376 O HOH B 442 2.10 REMARK 500 OE1 GLN B 188 O HOH B 301 2.11 REMARK 500 OE2 GLU A 128 O HOH A 301 2.14 REMARK 500 N ASP B 223 O HOH B 302 2.14 REMARK 500 O HOH B 309 O HOH B 335 2.15 REMARK 500 O HOH B 439 O HOH B 443 2.17 REMARK 500 O HOH A 400 O HOH A 459 2.17 REMARK 500 O HOH B 327 O HOH B 433 2.18 REMARK 500 O HOH B 394 O HOH B 432 2.18 REMARK 500 O HOH B 318 O HOH B 344 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 403 O HOH B 341 3656 2.00 REMARK 500 O HOH A 424 O HOH B 451 4456 2.02 REMARK 500 O HOH A 403 O HOH B 457 3656 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 145 -126.19 58.02 REMARK 500 PHE A 185 57.56 -94.24 REMARK 500 GLU B 128 -41.10 -172.99 REMARK 500 VAL B 216 -68.58 -108.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 464 DISTANCE = 7.01 ANGSTROMS REMARK 525 HOH B 461 DISTANCE = 5.94 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DCL RELATED DB: PDB REMARK 900 5DCL DBREF 5DCM A 0 221 UNP X5JZS1 X5JZS1_STRAG 1 222 DBREF 5DCM B 0 221 UNP X5JZS1 X5JZS1_STRAG 1 222 SEQADV 5DCM ASP A 222 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM PRO A 223 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ASN A 224 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM SER A 225 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM SER A 226 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM SER A 227 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM VAL A 228 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ASP A 229 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM LYS A 230 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM LEU A 231 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ALA A 232 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ALA A 233 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ALA A 234 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM LEU A 235 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM GLU A 236 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS A 237 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS A 238 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS A 239 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS A 240 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS A 241 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS A 242 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ASN B 222 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ASP B 223 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM PRO B 224 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM SER B 225 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM SER B 226 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM SER B 227 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM VAL B 228 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ASP B 229 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM LYS B 230 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM LEU B 231 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ALA B 232 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ALA B 233 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM ALA B 234 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM LEU B 235 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM GLU B 236 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS B 237 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS B 238 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS B 239 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS B 240 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS B 241 UNP X5JZS1 EXPRESSION TAG SEQADV 5DCM HIS B 242 UNP X5JZS1 EXPRESSION TAG SEQRES 1 A 243 MET SER GLN GLU GLN GLY LYS ILE TYR ILE VAL GLU ASP SEQRES 2 A 243 ASP MET THR ILE VAL SER LEU LEU LYS ASP HIS LEU SER SEQRES 3 A 243 ALA SER TYR HIS VAL SER SER VAL SER ASN PHE ARG ASP SEQRES 4 A 243 VAL LYS GLN GLU ILE ILE ALA PHE GLN PRO ASP LEU ILE SEQRES 5 A 243 LEU MET ASP ILE THR LEU PRO TYR PHE ASN GLY PHE TYR SEQRES 6 A 243 TRP THR ALA GLU LEU ARG LYS PHE LEU THR ILE PRO ILE SEQRES 7 A 243 ILE PHE ILE SER SER SER ASN ASP GLU MET ASP MET VAL SEQRES 8 A 243 MET ALA LEU ASN MET GLY GLY ASP ASP PHE ILE SER LYS SEQRES 9 A 243 PRO PHE SER LEU ALA VAL LEU ASP ALA LYS LEU THR ALA SEQRES 10 A 243 ILE LEU ARG ARG SER GLN GLN PHE ILE GLN GLN GLU LEU SEQRES 11 A 243 THR PHE GLY GLY PHE THR LEU THR ARG GLU GLY LEU LEU SEQRES 12 A 243 SER SER GLN ASP LYS GLU VAL ILE LEU SER PRO THR GLU SEQRES 13 A 243 ASN LYS ILE LEU SER ILE LEU LEU MET HIS PRO LYS GLN SEQRES 14 A 243 VAL VAL SER LYS GLU SER LEU LEU GLU LYS LEU TRP GLU SEQRES 15 A 243 ASN ASP SER PHE ILE ASP GLN ASN THR LEU ASN VAL ASN SEQRES 16 A 243 MET THR ARG LEU ARG LYS LYS ILE VAL PRO ILE GLY PHE SEQRES 17 A 243 ASP TYR ILE HIS THR VAL ARG GLY VAL GLY TYR LEU LEU SEQRES 18 A 243 GLN ASP PRO ASN SER SER SER VAL ASP LYS LEU ALA ALA SEQRES 19 A 243 ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 243 MET SER GLN GLU GLN GLY LYS ILE TYR ILE VAL GLU ASP SEQRES 2 B 243 ASP MET THR ILE VAL SER LEU LEU LYS ASP HIS LEU SER SEQRES 3 B 243 ALA SER TYR HIS VAL SER SER VAL SER ASN PHE ARG ASP SEQRES 4 B 243 VAL LYS GLN GLU ILE ILE ALA PHE GLN PRO ASP LEU ILE SEQRES 5 B 243 LEU MET ASP ILE THR LEU PRO TYR PHE ASN GLY PHE TYR SEQRES 6 B 243 TRP THR ALA GLU LEU ARG LYS PHE LEU THR ILE PRO ILE SEQRES 7 B 243 ILE PHE ILE SER SER SER ASN ASP GLU MET ASP MET VAL SEQRES 8 B 243 MET ALA LEU ASN MET GLY GLY ASP ASP PHE ILE SER LYS SEQRES 9 B 243 PRO PHE SER LEU ALA VAL LEU ASP ALA LYS LEU THR ALA SEQRES 10 B 243 ILE LEU ARG ARG SER GLN GLN PHE ILE GLN GLN GLU LEU SEQRES 11 B 243 THR PHE GLY GLY PHE THR LEU THR ARG GLU GLY LEU LEU SEQRES 12 B 243 SER SER GLN ASP LYS GLU VAL ILE LEU SER PRO THR GLU SEQRES 13 B 243 ASN LYS ILE LEU SER ILE LEU LEU MET HIS PRO LYS GLN SEQRES 14 B 243 VAL VAL SER LYS GLU SER LEU LEU GLU LYS LEU TRP GLU SEQRES 15 B 243 ASN ASP SER PHE ILE ASP GLN ASN THR LEU ASN VAL ASN SEQRES 16 B 243 MET THR ARG LEU ARG LYS LYS ILE VAL PRO ILE GLY PHE SEQRES 17 B 243 ASP TYR ILE HIS THR VAL ARG GLY VAL GLY TYR LEU LEU SEQRES 18 B 243 GLN ASN ASP PRO SER SER SER VAL ASP LYS LEU ALA ALA SEQRES 19 B 243 ALA LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *325(H2 O) HELIX 1 AA1 SER A 152 HIS A 165 1 14 HELIX 2 AA2 LYS A 172 ASN A 182 1 11 HELIX 3 AA3 ASP A 187 VAL A 203 1 17 HELIX 4 AA4 PRO A 204 GLY A 206 5 3 HELIX 5 AA5 SER B 152 MET B 164 1 13 HELIX 6 AA6 LYS B 172 GLU B 181 1 10 HELIX 7 AA7 ASP B 187 VAL B 203 1 17 HELIX 8 AA8 PRO B 204 GLY B 206 5 3 SHEET 1 AA1 4 LEU A 129 PHE A 131 0 SHEET 2 AA1 4 PHE A 134 LEU A 136 -1 O LEU A 136 N LEU A 129 SHEET 3 AA1 4 LEU A 141 SER A 144 -1 O SER A 143 N THR A 135 SHEET 4 AA1 4 LYS A 147 ILE A 150 -1 O VAL A 149 N LEU A 142 SHEET 1 AA2 3 VAL A 169 SER A 171 0 SHEET 2 AA2 3 GLY A 217 LEU A 220 -1 O TYR A 218 N VAL A 170 SHEET 3 AA2 3 ILE A 210 VAL A 213 -1 N VAL A 213 O GLY A 217 SHEET 1 AA3 4 LEU B 129 PHE B 131 0 SHEET 2 AA3 4 PHE B 134 LEU B 136 -1 O LEU B 136 N LEU B 129 SHEET 3 AA3 4 LEU B 141 SER B 143 -1 O SER B 143 N THR B 135 SHEET 4 AA3 4 GLU B 148 ILE B 150 -1 O VAL B 149 N LEU B 142 SHEET 1 AA4 3 VAL B 169 SER B 171 0 SHEET 2 AA4 3 GLY B 217 LEU B 220 -1 O TYR B 218 N VAL B 170 SHEET 3 AA4 3 ILE B 210 VAL B 213 -1 N VAL B 213 O GLY B 217 CRYST1 56.380 60.460 56.850 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017737 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016540 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017590 0.00000