data_5DDO # _entry.id 5DDO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DDO pdb_00005ddo 10.2210/pdb5ddo/pdb WWPDB D_1000213061 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-23 2 'Structure model' 1 1 2017-04-05 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2019-12-04 5 'Structure model' 1 4 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 3 'Structure model' 'Author supporting evidence' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 4 'Structure model' pdbx_audit_support 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DDO _pdbx_database_status.recvd_initial_deposition_date 2015-08-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5DDP PDB . unspecified 5DDQ PDB . unspecified 5DDR PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ren, A.' 1 'Patel, D.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 1800 _citation.page_last 1813 _citation.title 'Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2015.10.062 _citation.pdbx_database_id_PubMed 26655897 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ren, A.' 1 ? primary 'Xue, Y.' 2 ? primary 'Peselis, A.' 3 ? primary 'Serganov, A.' 4 ? primary 'Al-Hashimi, H.M.' 5 ? primary 'Patel, D.J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'L-glutamine riboswitch (58-MER)' 19718.770 2 ? ? ? 'some nucleotides are too flexible in the structure' 2 polymer man 'U1 small nuclear ribonucleoprotein A' 11209.120 2 ? ? ? ? 3 water nat water 18.015 11 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name U1A # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CGUUGGCCCAGGAAACUGGGUGGAAGUAAGGUCCAUUGCACUCCGGGCCUGAAGCAACGCU CGUUGGCCCAGGAAACUGGGUGGAAGUAAGGUCCAUUGCACUCCGGGCCUGAAGCAACGCU A,B ? 2 'polypeptide(L)' no no ;AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKP MRIQYAKTDSDIIAKMK ; ;AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKP MRIQYAKTDSDIIAKMK ; G,C ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 U n 1 4 U n 1 5 G n 1 6 G n 1 7 C n 1 8 C n 1 9 C n 1 10 A n 1 11 G n 1 12 G n 1 13 A n 1 14 A n 1 15 A n 1 16 C n 1 17 U n 1 18 G n 1 19 G n 1 20 G n 1 21 U n 1 22 G n 1 23 G n 1 24 A n 1 25 A n 1 26 G n 1 27 U n 1 28 A n 1 29 A n 1 30 G n 1 31 G n 1 32 U n 1 33 C n 1 34 C n 1 35 A n 1 36 U n 1 37 U n 1 38 G n 1 39 C n 1 40 A n 1 41 C n 1 42 U n 1 43 C n 1 44 C n 1 45 G n 1 46 G n 1 47 G n 1 48 C n 1 49 C n 1 50 U n 1 51 G n 1 52 A n 1 53 A n 1 54 G n 1 55 C n 1 56 A n 1 57 A n 1 58 C n 1 59 G n 1 60 C n 1 61 U n 2 1 ALA n 2 2 VAL n 2 3 PRO n 2 4 GLU n 2 5 THR n 2 6 ARG n 2 7 PRO n 2 8 ASN n 2 9 HIS n 2 10 THR n 2 11 ILE n 2 12 TYR n 2 13 ILE n 2 14 ASN n 2 15 ASN n 2 16 LEU n 2 17 ASN n 2 18 GLU n 2 19 LYS n 2 20 ILE n 2 21 LYS n 2 22 LYS n 2 23 ASP n 2 24 GLU n 2 25 LEU n 2 26 LYS n 2 27 LYS n 2 28 SER n 2 29 LEU n 2 30 HIS n 2 31 ALA n 2 32 ILE n 2 33 PHE n 2 34 SER n 2 35 ARG n 2 36 PHE n 2 37 GLY n 2 38 GLN n 2 39 ILE n 2 40 LEU n 2 41 ASP n 2 42 ILE n 2 43 LEU n 2 44 VAL n 2 45 SER n 2 46 ARG n 2 47 SER n 2 48 LEU n 2 49 LYS n 2 50 MET n 2 51 ARG n 2 52 GLY n 2 53 GLN n 2 54 ALA n 2 55 PHE n 2 56 VAL n 2 57 ILE n 2 58 PHE n 2 59 LYS n 2 60 GLU n 2 61 VAL n 2 62 SER n 2 63 SER n 2 64 ALA n 2 65 THR n 2 66 ASN n 2 67 ALA n 2 68 LEU n 2 69 ARG n 2 70 SER n 2 71 MET n 2 72 GLN n 2 73 GLY n 2 74 PHE n 2 75 PRO n 2 76 PHE n 2 77 TYR n 2 78 ASP n 2 79 LYS n 2 80 PRO n 2 81 MET n 2 82 ARG n 2 83 ILE n 2 84 GLN n 2 85 TYR n 2 86 ALA n 2 87 LYS n 2 88 THR n 2 89 ASP n 2 90 SER n 2 91 ASP n 2 92 ILE n 2 93 ILE n 2 94 ALA n 2 95 LYS n 2 96 MET n 2 97 LYS n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 97 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SNRPA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 61 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Synechococcus elongatus' _entity_src_nat.pdbx_ncbi_taxonomy_id 32046 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C A . n A 1 2 G 2 2 2 G G A . n A 1 3 U 3 3 3 U U A . n A 1 4 U 4 4 4 U U A . n A 1 5 G 5 5 5 G G A . n A 1 6 G 6 6 6 G G A . n A 1 7 C 7 7 7 C C A . n A 1 8 C 8 8 8 C C A . n A 1 9 C 9 9 9 C C A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 A 13 13 13 A A A . n A 1 14 A 14 14 14 A A A . n A 1 15 A 15 15 15 A A A . n A 1 16 C 16 16 16 C C A . n A 1 17 U 17 17 17 U U A . n A 1 18 G 18 18 18 G G A . n A 1 19 G 19 19 19 G G A . n A 1 20 G 20 20 20 G G A . n A 1 21 U 21 21 21 U U A . n A 1 22 G 22 22 ? ? ? A . n A 1 23 G 23 23 ? ? ? A . n A 1 24 A 24 24 ? ? ? A . n A 1 25 A 25 25 25 A A A . n A 1 26 G 26 26 26 G G A . n A 1 27 U 27 27 27 U U A . n A 1 28 A 28 28 28 A A A . n A 1 29 A 29 29 29 A A A . n A 1 30 G 30 30 30 G G A . n A 1 31 G 31 31 31 G G A . n A 1 32 U 32 32 32 U U A . n A 1 33 C 33 33 33 C C A . n A 1 34 C 34 34 34 C C A . n A 1 35 A 35 35 35 A A A . n A 1 36 U 36 36 36 U U A . n A 1 37 U 37 37 37 U U A . n A 1 38 G 38 38 38 G G A . n A 1 39 C 39 39 39 C C A . n A 1 40 A 40 40 40 A A A . n A 1 41 C 41 41 41 C C A . n A 1 42 U 42 42 42 U U A . n A 1 43 C 43 43 43 C C A . n A 1 44 C 44 44 44 C C A . n A 1 45 G 45 45 45 G G A . n A 1 46 G 46 46 46 G G A . n A 1 47 G 47 47 47 G G A . n A 1 48 C 48 48 48 C C A . n A 1 49 C 49 49 49 C C A . n A 1 50 U 50 50 50 U U A . n A 1 51 G 51 51 51 G G A . n A 1 52 A 52 52 52 A A A . n A 1 53 A 53 53 53 A A A . n A 1 54 G 54 54 54 G G A . n A 1 55 C 55 55 55 C C A . n A 1 56 A 56 56 56 A A A . n A 1 57 A 57 57 57 A A A . n A 1 58 C 58 58 58 C C A . n A 1 59 G 59 59 59 G G A . n A 1 60 C 60 60 60 C C A . n A 1 61 U 61 61 61 U U A . n B 2 1 ALA 1 2 ? ? ? G . n B 2 2 VAL 2 3 ? ? ? G . n B 2 3 PRO 3 4 ? ? ? G . n B 2 4 GLU 4 5 ? ? ? G . n B 2 5 THR 5 6 ? ? ? G . n B 2 6 ARG 6 7 7 ARG ARG G . n B 2 7 PRO 7 8 8 PRO PRO G . n B 2 8 ASN 8 9 9 ASN ASN G . n B 2 9 HIS 9 10 10 HIS ALA G . n B 2 10 THR 10 11 11 THR THR G . n B 2 11 ILE 11 12 12 ILE ILE G . n B 2 12 TYR 12 13 13 TYR TYR G . n B 2 13 ILE 13 14 14 ILE ILE G . n B 2 14 ASN 14 15 15 ASN ASN G . n B 2 15 ASN 15 16 16 ASN ASN G . n B 2 16 LEU 16 17 17 LEU LEU G . n B 2 17 ASN 17 18 18 ASN ASN G . n B 2 18 GLU 18 19 19 GLU GLU G . n B 2 19 LYS 19 20 20 LYS LYS G . n B 2 20 ILE 20 21 21 ILE ILE G . n B 2 21 LYS 21 22 22 LYS LYS G . n B 2 22 LYS 22 23 23 LYS LYS G . n B 2 23 ASP 23 24 24 ASP ASP G . n B 2 24 GLU 24 25 25 GLU GLU G . n B 2 25 LEU 25 26 26 LEU LEU G . n B 2 26 LYS 26 27 27 LYS LYS G . n B 2 27 LYS 27 28 28 LYS LYS G . n B 2 28 SER 28 29 29 SER SER G . n B 2 29 LEU 29 30 30 LEU LEU G . n B 2 30 HIS 30 31 31 HIS HIS G . n B 2 31 ALA 31 32 32 ALA ALA G . n B 2 32 ILE 32 33 33 ILE ILE G . n B 2 33 PHE 33 34 34 PHE PHE G . n B 2 34 SER 34 35 35 SER SER G . n B 2 35 ARG 35 36 36 ARG ARG G . n B 2 36 PHE 36 37 37 PHE PHE G . n B 2 37 GLY 37 38 38 GLY GLY G . n B 2 38 GLN 38 39 39 GLN GLN G . n B 2 39 ILE 39 40 40 ILE ILE G . n B 2 40 LEU 40 41 41 LEU LEU G . n B 2 41 ASP 41 42 42 ASP ASP G . n B 2 42 ILE 42 43 43 ILE ILE G . n B 2 43 LEU 43 44 44 LEU LEU G . n B 2 44 VAL 44 45 45 VAL VAL G . n B 2 45 SER 45 46 46 SER SER G . n B 2 46 ARG 46 47 47 ARG ARG G . n B 2 47 SER 47 48 48 SER SER G . n B 2 48 LEU 48 49 49 LEU LEU G . n B 2 49 LYS 49 50 50 LYS LYS G . n B 2 50 MET 50 51 51 MET MET G . n B 2 51 ARG 51 52 52 ARG ARG G . n B 2 52 GLY 52 53 53 GLY GLY G . n B 2 53 GLN 53 54 54 GLN GLN G . n B 2 54 ALA 54 55 55 ALA ALA G . n B 2 55 PHE 55 56 56 PHE PHE G . n B 2 56 VAL 56 57 57 VAL VAL G . n B 2 57 ILE 57 58 58 ILE ILE G . n B 2 58 PHE 58 59 59 PHE PHE G . n B 2 59 LYS 59 60 60 LYS LYS G . n B 2 60 GLU 60 61 61 GLU GLU G . n B 2 61 VAL 61 62 62 VAL VAL G . n B 2 62 SER 62 63 63 SER SER G . n B 2 63 SER 63 64 64 SER SER G . n B 2 64 ALA 64 65 65 ALA ALA G . n B 2 65 THR 65 66 66 THR THR G . n B 2 66 ASN 66 67 67 ASN ASN G . n B 2 67 ALA 67 68 68 ALA ALA G . n B 2 68 LEU 68 69 69 LEU LEU G . n B 2 69 ARG 69 70 70 ARG ARG G . n B 2 70 SER 70 71 71 SER SER G . n B 2 71 MET 71 72 72 MET MET G . n B 2 72 GLN 72 73 73 GLN GLN G . n B 2 73 GLY 73 74 74 GLY GLY G . n B 2 74 PHE 74 75 75 PHE PHE G . n B 2 75 PRO 75 76 76 PRO PRO G . n B 2 76 PHE 76 77 77 PHE PHE G . n B 2 77 TYR 77 78 78 TYR TYR G . n B 2 78 ASP 78 79 79 ASP ASP G . n B 2 79 LYS 79 80 80 LYS LYS G . n B 2 80 PRO 80 81 81 PRO PRO G . n B 2 81 MET 81 82 82 MET MET G . n B 2 82 ARG 82 83 83 ARG ARG G . n B 2 83 ILE 83 84 84 ILE ILE G . n B 2 84 GLN 84 85 85 GLN GLN G . n B 2 85 TYR 85 86 86 TYR TYR G . n B 2 86 ALA 86 87 87 ALA ALA G . n B 2 87 LYS 87 88 88 LYS LYS G . n B 2 88 THR 88 89 89 THR THR G . n B 2 89 ASP 89 90 90 ASP ASP G . n B 2 90 SER 90 91 91 SER SER G . n B 2 91 ASP 91 92 92 ASP ASP G . n B 2 92 ILE 92 93 ? ? ? G . n B 2 93 ILE 93 94 ? ? ? G . n B 2 94 ALA 94 95 ? ? ? G . n B 2 95 LYS 95 96 ? ? ? G . n B 2 96 MET 96 97 ? ? ? G . n B 2 97 LYS 97 98 ? ? ? G . n C 1 1 C 1 1 1 C C B . n C 1 2 G 2 2 2 G G B . n C 1 3 U 3 3 3 U U B . n C 1 4 U 4 4 4 U U B . n C 1 5 G 5 5 5 G G B . n C 1 6 G 6 6 6 G G B . n C 1 7 C 7 7 7 C C B . n C 1 8 C 8 8 8 C C B . n C 1 9 C 9 9 9 C C B . n C 1 10 A 10 10 10 A A B . n C 1 11 G 11 11 11 G G B . n C 1 12 G 12 12 12 G G B . n C 1 13 A 13 13 13 A A B . n C 1 14 A 14 14 14 A A B . n C 1 15 A 15 15 15 A A B . n C 1 16 C 16 16 16 C C B . n C 1 17 U 17 17 17 U U B . n C 1 18 G 18 18 18 G G B . n C 1 19 G 19 19 19 G G B . n C 1 20 G 20 20 20 G G B . n C 1 21 U 21 21 21 U U B . n C 1 22 G 22 22 ? ? ? B . n C 1 23 G 23 23 ? ? ? B . n C 1 24 A 24 24 ? ? ? B . n C 1 25 A 25 25 25 A A B . n C 1 26 G 26 26 26 G G B . n C 1 27 U 27 27 27 U U B . n C 1 28 A 28 28 28 A A B . n C 1 29 A 29 29 29 A A B . n C 1 30 G 30 30 30 G G B . n C 1 31 G 31 31 31 G G B . n C 1 32 U 32 32 32 U U B . n C 1 33 C 33 33 33 C C B . n C 1 34 C 34 34 34 C C B . n C 1 35 A 35 35 35 A A B . n C 1 36 U 36 36 36 U U B . n C 1 37 U 37 37 37 U U B . n C 1 38 G 38 38 38 G G B . n C 1 39 C 39 39 39 C C B . n C 1 40 A 40 40 40 A A B . n C 1 41 C 41 41 41 C C B . n C 1 42 U 42 42 42 U U B . n C 1 43 C 43 43 43 C C B . n C 1 44 C 44 44 44 C C B . n C 1 45 G 45 45 45 G G B . n C 1 46 G 46 46 46 G G B . n C 1 47 G 47 47 47 G G B . n C 1 48 C 48 48 48 C C B . n C 1 49 C 49 49 49 C C B . n C 1 50 U 50 50 50 U U B . n C 1 51 G 51 51 51 G G B . n C 1 52 A 52 52 52 A A B . n C 1 53 A 53 53 53 A A B . n C 1 54 G 54 54 54 G G B . n C 1 55 C 55 55 55 C C B . n C 1 56 A 56 56 56 A A B . n C 1 57 A 57 57 57 A A B . n C 1 58 C 58 58 58 C C B . n C 1 59 G 59 59 59 G G B . n C 1 60 C 60 60 60 C C B . n C 1 61 U 61 61 61 U U B . n D 2 1 ALA 1 2 ? ? ? C . n D 2 2 VAL 2 3 ? ? ? C . n D 2 3 PRO 3 4 ? ? ? C . n D 2 4 GLU 4 5 ? ? ? C . n D 2 5 THR 5 6 6 THR THR C . n D 2 6 ARG 6 7 7 ARG ALA C . n D 2 7 PRO 7 8 8 PRO PRO C . n D 2 8 ASN 8 9 9 ASN ASN C . n D 2 9 HIS 9 10 10 HIS HIS C . n D 2 10 THR 10 11 11 THR THR C . n D 2 11 ILE 11 12 12 ILE ILE C . n D 2 12 TYR 12 13 13 TYR TYR C . n D 2 13 ILE 13 14 14 ILE ILE C . n D 2 14 ASN 14 15 15 ASN ASN C . n D 2 15 ASN 15 16 16 ASN ASN C . n D 2 16 LEU 16 17 17 LEU LEU C . n D 2 17 ASN 17 18 18 ASN ASN C . n D 2 18 GLU 18 19 19 GLU GLU C . n D 2 19 LYS 19 20 20 LYS LYS C . n D 2 20 ILE 20 21 21 ILE ILE C . n D 2 21 LYS 21 22 22 LYS LYS C . n D 2 22 LYS 22 23 23 LYS LYS C . n D 2 23 ASP 23 24 24 ASP ASP C . n D 2 24 GLU 24 25 25 GLU GLU C . n D 2 25 LEU 25 26 26 LEU LEU C . n D 2 26 LYS 26 27 27 LYS LYS C . n D 2 27 LYS 27 28 28 LYS LYS C . n D 2 28 SER 28 29 29 SER SER C . n D 2 29 LEU 29 30 30 LEU LEU C . n D 2 30 HIS 30 31 31 HIS HIS C . n D 2 31 ALA 31 32 32 ALA ALA C . n D 2 32 ILE 32 33 33 ILE ILE C . n D 2 33 PHE 33 34 34 PHE PHE C . n D 2 34 SER 34 35 35 SER SER C . n D 2 35 ARG 35 36 36 ARG ALA C . n D 2 36 PHE 36 37 37 PHE PHE C . n D 2 37 GLY 37 38 38 GLY GLY C . n D 2 38 GLN 38 39 39 GLN GLN C . n D 2 39 ILE 39 40 40 ILE ILE C . n D 2 40 LEU 40 41 41 LEU LEU C . n D 2 41 ASP 41 42 42 ASP ASP C . n D 2 42 ILE 42 43 43 ILE ILE C . n D 2 43 LEU 43 44 44 LEU LEU C . n D 2 44 VAL 44 45 45 VAL VAL C . n D 2 45 SER 45 46 46 SER SER C . n D 2 46 ARG 46 47 47 ARG ARG C . n D 2 47 SER 47 48 48 SER SER C . n D 2 48 LEU 48 49 49 LEU LEU C . n D 2 49 LYS 49 50 50 LYS LYS C . n D 2 50 MET 50 51 51 MET MET C . n D 2 51 ARG 51 52 52 ARG ARG C . n D 2 52 GLY 52 53 53 GLY GLY C . n D 2 53 GLN 53 54 54 GLN GLN C . n D 2 54 ALA 54 55 55 ALA ALA C . n D 2 55 PHE 55 56 56 PHE PHE C . n D 2 56 VAL 56 57 57 VAL VAL C . n D 2 57 ILE 57 58 58 ILE ILE C . n D 2 58 PHE 58 59 59 PHE PHE C . n D 2 59 LYS 59 60 60 LYS LYS C . n D 2 60 GLU 60 61 61 GLU GLU C . n D 2 61 VAL 61 62 62 VAL VAL C . n D 2 62 SER 62 63 63 SER SER C . n D 2 63 SER 63 64 64 SER SER C . n D 2 64 ALA 64 65 65 ALA ALA C . n D 2 65 THR 65 66 66 THR THR C . n D 2 66 ASN 66 67 67 ASN ASN C . n D 2 67 ALA 67 68 68 ALA ALA C . n D 2 68 LEU 68 69 69 LEU LEU C . n D 2 69 ARG 69 70 70 ARG ARG C . n D 2 70 SER 70 71 71 SER SER C . n D 2 71 MET 71 72 72 MET MET C . n D 2 72 GLN 72 73 73 GLN GLN C . n D 2 73 GLY 73 74 74 GLY GLY C . n D 2 74 PHE 74 75 75 PHE PHE C . n D 2 75 PRO 75 76 76 PRO PRO C . n D 2 76 PHE 76 77 77 PHE PHE C . n D 2 77 TYR 77 78 78 TYR TYR C . n D 2 78 ASP 78 79 79 ASP ASP C . n D 2 79 LYS 79 80 80 LYS LYS C . n D 2 80 PRO 80 81 81 PRO PRO C . n D 2 81 MET 81 82 82 MET MET C . n D 2 82 ARG 82 83 83 ARG ARG C . n D 2 83 ILE 83 84 84 ILE ILE C . n D 2 84 GLN 84 85 85 GLN GLN C . n D 2 85 TYR 85 86 86 TYR TYR C . n D 2 86 ALA 86 87 87 ALA ALA C . n D 2 87 LYS 87 88 88 LYS LYS C . n D 2 88 THR 88 89 89 THR THR C . n D 2 89 ASP 89 90 90 ASP ASP C . n D 2 90 SER 90 91 91 SER SER C . n D 2 91 ASP 91 92 92 ASP ASP C . n D 2 92 ILE 92 93 ? ? ? C . n D 2 93 ILE 93 94 ? ? ? C . n D 2 94 ALA 94 95 ? ? ? C . n D 2 95 LYS 95 96 ? ? ? C . n D 2 96 MET 96 97 ? ? ? C . n D 2 97 LYS 97 98 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 101 7 HOH HOH A . E 3 HOH 2 102 6 HOH HOH A . E 3 HOH 3 103 3 HOH HOH A . E 3 HOH 4 104 4 HOH HOH A . E 3 HOH 5 105 5 HOH HOH A . F 3 HOH 1 101 1 HOH HOH G . F 3 HOH 2 102 11 HOH HOH G . F 3 HOH 3 103 2 HOH HOH G . G 3 HOH 1 101 8 HOH HOH B . G 3 HOH 2 102 10 HOH HOH B . G 3 HOH 3 103 9 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 G ARG 7 ? CG ? B ARG 6 CG 2 1 Y 1 G ARG 7 ? CD ? B ARG 6 CD 3 1 Y 1 G ARG 7 ? NE ? B ARG 6 NE 4 1 Y 1 G ARG 7 ? CZ ? B ARG 6 CZ 5 1 Y 1 G ARG 7 ? NH1 ? B ARG 6 NH1 6 1 Y 1 G ARG 7 ? NH2 ? B ARG 6 NH2 7 1 Y 1 G HIS 10 ? CG ? B HIS 9 CG 8 1 Y 1 G HIS 10 ? ND1 ? B HIS 9 ND1 9 1 Y 1 G HIS 10 ? CD2 ? B HIS 9 CD2 10 1 Y 1 G HIS 10 ? CE1 ? B HIS 9 CE1 11 1 Y 1 G HIS 10 ? NE2 ? B HIS 9 NE2 12 1 Y 1 G LYS 20 ? CG ? B LYS 19 CG 13 1 Y 1 G LYS 20 ? CD ? B LYS 19 CD 14 1 Y 1 G LYS 20 ? CE ? B LYS 19 CE 15 1 Y 1 G LYS 20 ? NZ ? B LYS 19 NZ 16 1 Y 1 G LYS 23 ? CG ? B LYS 22 CG 17 1 Y 1 G LYS 23 ? CD ? B LYS 22 CD 18 1 Y 1 G LYS 23 ? CE ? B LYS 22 CE 19 1 Y 1 G LYS 23 ? NZ ? B LYS 22 NZ 20 1 Y 1 G GLU 25 ? CG ? B GLU 24 CG 21 1 Y 1 G GLU 25 ? CD ? B GLU 24 CD 22 1 Y 1 G GLU 25 ? OE1 ? B GLU 24 OE1 23 1 Y 1 G GLU 25 ? OE2 ? B GLU 24 OE2 24 1 Y 1 G LYS 28 ? CG ? B LYS 27 CG 25 1 Y 1 G LYS 28 ? CD ? B LYS 27 CD 26 1 Y 1 G LYS 28 ? CE ? B LYS 27 CE 27 1 Y 1 G LYS 28 ? NZ ? B LYS 27 NZ 28 1 Y 1 G SER 35 ? OG ? B SER 34 OG 29 1 Y 1 G ASP 42 ? CG ? B ASP 41 CG 30 1 Y 1 G ASP 42 ? OD1 ? B ASP 41 OD1 31 1 Y 1 G ASP 42 ? OD2 ? B ASP 41 OD2 32 1 Y 1 G GLU 61 ? CG ? B GLU 60 CG 33 1 Y 1 G GLU 61 ? CD ? B GLU 60 CD 34 1 Y 1 G GLU 61 ? OE1 ? B GLU 60 OE1 35 1 Y 1 G GLU 61 ? OE2 ? B GLU 60 OE2 36 1 Y 1 G VAL 62 ? CG1 ? B VAL 61 CG1 37 1 Y 1 G VAL 62 ? CG2 ? B VAL 61 CG2 38 1 Y 1 G SER 63 ? OG ? B SER 62 OG 39 1 Y 1 G ARG 70 ? CG ? B ARG 69 CG 40 1 Y 1 G ARG 70 ? CD ? B ARG 69 CD 41 1 Y 1 G ARG 70 ? NE ? B ARG 69 NE 42 1 Y 1 G ARG 70 ? CZ ? B ARG 69 CZ 43 1 Y 1 G ARG 70 ? NH1 ? B ARG 69 NH1 44 1 Y 1 G ARG 70 ? NH2 ? B ARG 69 NH2 45 1 Y 1 G LYS 88 ? CG ? B LYS 87 CG 46 1 Y 1 G LYS 88 ? CD ? B LYS 87 CD 47 1 Y 1 G LYS 88 ? CE ? B LYS 87 CE 48 1 Y 1 G LYS 88 ? NZ ? B LYS 87 NZ 49 1 Y 1 G ASP 90 ? CG ? B ASP 89 CG 50 1 Y 1 G ASP 90 ? OD1 ? B ASP 89 OD1 51 1 Y 1 G ASP 90 ? OD2 ? B ASP 89 OD2 52 1 Y 1 C ARG 7 ? CG ? D ARG 6 CG 53 1 Y 1 C ARG 7 ? CD ? D ARG 6 CD 54 1 Y 1 C ARG 7 ? NE ? D ARG 6 NE 55 1 Y 1 C ARG 7 ? CZ ? D ARG 6 CZ 56 1 Y 1 C ARG 7 ? NH1 ? D ARG 6 NH1 57 1 Y 1 C ARG 7 ? NH2 ? D ARG 6 NH2 58 1 Y 1 C LYS 20 ? CG ? D LYS 19 CG 59 1 Y 1 C LYS 20 ? CD ? D LYS 19 CD 60 1 Y 1 C LYS 20 ? CE ? D LYS 19 CE 61 1 Y 1 C LYS 20 ? NZ ? D LYS 19 NZ 62 1 Y 1 C GLU 25 ? CG ? D GLU 24 CG 63 1 Y 1 C GLU 25 ? CD ? D GLU 24 CD 64 1 Y 1 C GLU 25 ? OE1 ? D GLU 24 OE1 65 1 Y 1 C GLU 25 ? OE2 ? D GLU 24 OE2 66 1 Y 1 C LYS 28 ? CG ? D LYS 27 CG 67 1 Y 1 C LYS 28 ? CD ? D LYS 27 CD 68 1 Y 1 C LYS 28 ? CE ? D LYS 27 CE 69 1 Y 1 C LYS 28 ? NZ ? D LYS 27 NZ 70 1 Y 1 C ARG 36 ? CG ? D ARG 35 CG 71 1 Y 1 C ARG 36 ? CD ? D ARG 35 CD 72 1 Y 1 C ARG 36 ? NE ? D ARG 35 NE 73 1 Y 1 C ARG 36 ? CZ ? D ARG 35 CZ 74 1 Y 1 C ARG 36 ? NH1 ? D ARG 35 NH1 75 1 Y 1 C ARG 36 ? NH2 ? D ARG 35 NH2 76 1 Y 1 C LEU 49 ? CG ? D LEU 48 CG 77 1 Y 1 C LEU 49 ? CD1 ? D LEU 48 CD1 78 1 Y 1 C LEU 49 ? CD2 ? D LEU 48 CD2 79 1 Y 1 C LYS 50 ? CG ? D LYS 49 CG 80 1 Y 1 C LYS 50 ? CD ? D LYS 49 CD 81 1 Y 1 C LYS 50 ? CE ? D LYS 49 CE 82 1 Y 1 C LYS 50 ? NZ ? D LYS 49 NZ 83 1 Y 1 C ARG 52 ? CG ? D ARG 51 CG 84 1 Y 1 C ARG 52 ? CD ? D ARG 51 CD 85 1 Y 1 C ARG 52 ? NE ? D ARG 51 NE 86 1 Y 1 C ARG 52 ? CZ ? D ARG 51 CZ 87 1 Y 1 C ARG 52 ? NH1 ? D ARG 51 NH1 88 1 Y 1 C ARG 52 ? NH2 ? D ARG 51 NH2 89 1 Y 1 C GLU 61 ? CG ? D GLU 60 CG 90 1 Y 1 C GLU 61 ? CD ? D GLU 60 CD 91 1 Y 1 C GLU 61 ? OE1 ? D GLU 60 OE1 92 1 Y 1 C GLU 61 ? OE2 ? D GLU 60 OE2 93 1 Y 1 C VAL 62 ? CG1 ? D VAL 61 CG1 94 1 Y 1 C VAL 62 ? CG2 ? D VAL 61 CG2 95 1 Y 1 C SER 63 ? OG ? D SER 62 OG 96 1 Y 1 C ASN 67 ? CG ? D ASN 66 CG 97 1 Y 1 C ASN 67 ? OD1 ? D ASN 66 OD1 98 1 Y 1 C ASN 67 ? ND2 ? D ASN 66 ND2 99 1 Y 1 C ARG 70 ? CG ? D ARG 69 CG 100 1 Y 1 C ARG 70 ? CD ? D ARG 69 CD 101 1 Y 1 C ARG 70 ? NE ? D ARG 69 NE 102 1 Y 1 C ARG 70 ? CZ ? D ARG 69 CZ 103 1 Y 1 C ARG 70 ? NH1 ? D ARG 69 NH1 104 1 Y 1 C ARG 70 ? NH2 ? D ARG 69 NH2 105 1 Y 1 C GLN 85 ? CG ? D GLN 84 CG 106 1 Y 1 C GLN 85 ? CD ? D GLN 84 CD 107 1 Y 1 C GLN 85 ? OE1 ? D GLN 84 OE1 108 1 Y 1 C GLN 85 ? NE2 ? D GLN 84 NE2 109 1 Y 1 C LYS 88 ? CG ? D LYS 87 CG 110 1 Y 1 C LYS 88 ? CD ? D LYS 87 CD 111 1 Y 1 C LYS 88 ? CE ? D LYS 87 CE 112 1 Y 1 C LYS 88 ? NZ ? D LYS 87 NZ 113 1 Y 1 C ASP 90 ? CG ? D ASP 89 CG 114 1 Y 1 C ASP 90 ? OD1 ? D ASP 89 OD1 115 1 Y 1 C ASP 90 ? OD2 ? D ASP 89 OD2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.7.3_928 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 99.05 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5DDO _cell.details ? _cell.formula_units_Z ? _cell.length_a 80.840 _cell.length_a_esd ? _cell.length_b 99.652 _cell.length_b_esd ? _cell.length_c 88.461 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DDO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DDO _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Na-formate, 21% (w/v) PEG3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-01-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DDO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12813 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.1 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 15.7 _reflns.pdbx_netI_over_sigmaI 15.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.21 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.479 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -22.0276 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -11.0795 _refine.aniso_B[2][2] 17.3009 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 4.7267 _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DDO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.1 _refine.ls_d_res_low 39.917 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12791 _refine.ls_number_reflns_R_free 624 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.92 _refine.ls_percent_reflns_R_free 4.88 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2305 _refine.ls_R_factor_R_free 0.2887 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2274 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol 41.469 _refine.solvent_model_param_ksol 0.241 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'U1A protein' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.24 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.11 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.45 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1300 _refine_hist.pdbx_number_atoms_nucleic_acid 2480 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 11 _refine_hist.number_atoms_total 3791 _refine_hist.d_res_high 3.1 _refine_hist.d_res_low 39.917 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 4095 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.261 ? 6102 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 21.408 ? 1846 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.074 ? 787 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 345 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.0776 3.3872 . . 157 2957 97.00 . . . 0.3085 . 0.2707 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3872 3.8770 . . 147 3049 100.00 . . . 0.3161 . 0.2507 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8770 4.8832 . . 162 3069 100.00 . . . 0.3153 . 0.2186 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.8832 39.9202 . . 158 3092 99.00 . . . 0.2534 . 0.2120 . . . . . . . . . . # _struct.entry_id 5DDO _struct.title 'Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DDO _struct_keywords.text 'riboswitch, L-glutamine, free-form, RNA, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5DDO 5DDO ? 1 ? 1 2 UNP SNRPA_HUMAN P09012 ? 2 ;AVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKP MRIQYAKTDSDIIAKMK ; 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5DDO A 1 ? 61 ? 5DDO 1 ? 61 ? 1 61 2 2 5DDO G 1 ? 97 ? P09012 2 ? 98 ? 2 98 3 1 5DDO B 1 ? 61 ? 5DDO 1 ? 61 ? 1 61 4 2 5DDO C 1 ? 97 ? P09012 2 ? 98 ? 2 98 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 5DDO HIS G 30 ? UNP P09012 TYR 31 'engineered mutation' 31 1 2 5DDO ARG G 35 ? UNP P09012 GLN 36 'engineered mutation' 36 2 4 5DDO HIS C 30 ? UNP P09012 TYR 31 'engineered mutation' 31 3 4 5DDO ARG C 35 ? UNP P09012 GLN 36 'engineered mutation' 36 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1760 ? 1 MORE -4 ? 1 'SSA (A^2)' 13640 ? 2 'ABSA (A^2)' 1620 ? 2 MORE -5 ? 2 'SSA (A^2)' 13690 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F 2 1 C,D,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS B 21 ? SER B 34 ? LYS G 22 SER G 35 1 ? 14 HELX_P HELX_P2 AA2 ARG B 35 ? GLY B 37 ? ARG G 36 GLY G 38 5 ? 3 HELX_P HELX_P3 AA3 VAL B 61 ? MET B 71 ? VAL G 62 MET G 72 1 ? 11 HELX_P HELX_P4 AA4 LYS D 21 ? SER D 34 ? LYS C 22 SER C 35 1 ? 14 HELX_P HELX_P5 AA5 ARG D 35 ? GLY D 37 ? ARG C 36 GLY C 38 5 ? 3 HELX_P HELX_P6 AA6 GLU D 60 ? GLN D 72 ? GLU C 61 GLN C 73 1 ? 13 HELX_P HELX_P7 AA7 PRO D 75 ? LYS D 79 ? PRO C 76 LYS C 80 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 59 N1 ? ? A C 1 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 59 O6 ? ? A C 1 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 59 N2 ? ? A C 1 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 58 N3 ? ? A G 2 A C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 58 O2 ? ? A G 2 A C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 58 N4 ? ? A G 2 A C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 57 N1 ? ? A U 3 A A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 57 N6 ? ? A U 3 A A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 56 N1 ? ? A U 4 A A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 56 N6 ? ? A U 4 A A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 55 N3 ? ? A G 5 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 55 O2 ? ? A G 5 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 55 N4 ? ? A G 5 A C 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 A U 21 O2 ? ? A G 6 A U 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? A G 6 O6 ? ? ? 1_555 A U 21 N3 ? ? A G 6 A U 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 20 N1 ? ? A C 7 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 20 O6 ? ? A C 7 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 20 N2 ? ? A C 7 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 19 N1 ? ? A C 8 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 19 O6 ? ? A C 8 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 19 N2 ? ? A C 8 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 18 N1 ? ? A C 9 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 18 O6 ? ? A C 9 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 18 N2 ? ? A C 9 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A A 10 N1 ? ? ? 1_555 A U 17 N3 ? ? A A 10 A U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N6 ? ? ? 1_555 A U 17 O4 ? ? A A 10 A U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 16 N3 ? ? A G 11 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 16 O2 ? ? A G 11 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 16 N4 ? ? A G 11 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 12 N2 ? ? ? 1_555 A A 15 N7 ? ? A G 12 A A 15 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog31 hydrog ? ? A G 20 N2 ? ? ? 1_555 A A 53 N3 ? ? A G 20 A A 53 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog32 hydrog ? ? A A 25 N6 ? ? ? 1_555 A A 53 N7 ? ? A A 25 A A 53 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog33 hydrog ? ? A A 25 N7 ? ? ? 1_555 A A 53 N6 ? ? A A 25 A A 53 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog34 hydrog ? ? A U 27 N3 ? ? ? 1_555 A A 52 N7 ? ? A U 27 A A 52 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog35 hydrog ? ? A U 27 O2 ? ? ? 1_555 A A 52 N6 ? ? A U 27 A A 52 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog36 hydrog ? ? A A 28 N6 ? ? ? 1_555 A G 51 N3 ? ? A A 28 A G 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog37 hydrog ? ? A A 28 N7 ? ? ? 1_555 A G 51 N2 ? ? A A 28 A G 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog38 hydrog ? ? A A 29 N1 ? ? ? 1_555 A U 50 N3 ? ? A A 29 A U 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 29 N6 ? ? ? 1_555 A U 50 O4 ? ? A A 29 A U 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 49 N3 ? ? A G 30 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 49 O2 ? ? A G 30 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 49 N4 ? ? A G 30 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 31 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 31 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 31 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 49 N3 ? ? A G 31 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 49 O2 ? ? A G 31 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 49 N4 ? ? A G 31 A C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 32 N3 ? ? ? 1_555 A G 47 O6 ? ? A U 32 A G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog50 hydrog ? ? A U 32 O2 ? ? ? 1_555 A G 47 N1 ? ? A U 32 A G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog51 hydrog ? ? A C 33 N3 ? ? ? 1_555 A G 46 N1 ? ? A C 33 A G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 33 N4 ? ? ? 1_555 A G 46 O6 ? ? A C 33 A G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 33 O2 ? ? ? 1_555 A G 46 N2 ? ? A C 33 A G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 34 N3 ? ? ? 1_555 A G 45 N1 ? ? A C 34 A G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 34 N4 ? ? ? 1_555 A G 45 O6 ? ? A C 34 A G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 34 O2 ? ? ? 1_555 A G 45 N2 ? ? A C 34 A G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C C 1 N4 ? ? ? 1_555 C G 59 O6 ? ? B C 1 B G 59 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog58 hydrog ? ? C G 2 O6 ? ? ? 1_555 C C 58 N4 ? ? B G 2 B C 58 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog59 hydrog ? ? C U 3 N3 ? ? ? 1_555 C A 57 N1 ? ? B U 3 B A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C U 3 O4 ? ? ? 1_555 C A 57 N6 ? ? B U 3 B A 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? C U 4 N3 ? ? ? 1_555 C A 56 N1 ? ? B U 4 B A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C U 4 O4 ? ? ? 1_555 C A 56 N6 ? ? B U 4 B A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C G 5 N1 ? ? ? 1_555 C C 55 O2 ? ? B G 5 B C 55 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog64 hydrog ? ? C G 5 N2 ? ? ? 1_555 C C 55 N3 ? ? B G 5 B C 55 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog65 hydrog ? ? C G 6 N1 ? ? ? 1_555 C U 21 O2 ? ? B G 6 B U 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog66 hydrog ? ? C G 6 O6 ? ? ? 1_555 C U 21 N3 ? ? B G 6 B U 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog67 hydrog ? ? C C 7 N3 ? ? ? 1_555 C G 20 N1 ? ? B C 7 B G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? C C 7 N4 ? ? ? 1_555 C G 20 O6 ? ? B C 7 B G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? C C 7 O2 ? ? ? 1_555 C G 20 N2 ? ? B C 7 B G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? C C 8 N3 ? ? ? 1_555 C G 19 N1 ? ? B C 8 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? C C 8 N4 ? ? ? 1_555 C G 19 O6 ? ? B C 8 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? C C 8 O2 ? ? ? 1_555 C G 19 N2 ? ? B C 8 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? C C 9 N3 ? ? ? 1_555 C G 18 N1 ? ? B C 9 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? C C 9 N4 ? ? ? 1_555 C G 18 O6 ? ? B C 9 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? C C 9 O2 ? ? ? 1_555 C G 18 N2 ? ? B C 9 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? C A 10 N1 ? ? ? 1_555 C U 17 N3 ? ? B A 10 B U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? C A 10 N6 ? ? ? 1_555 C U 17 O4 ? ? B A 10 B U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? C G 11 N2 ? ? ? 1_555 C C 16 O2 ? ? B G 11 B C 16 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog79 hydrog ? ? C G 12 N2 ? ? ? 1_555 C A 15 N1 ? ? B G 12 B A 15 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog80 hydrog ? ? C A 25 N6 ? ? ? 1_555 C A 53 N7 ? ? B A 25 B A 53 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog81 hydrog ? ? C A 25 N7 ? ? ? 1_555 C A 53 N6 ? ? B A 25 B A 53 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog82 hydrog ? ? C G 26 N2 ? ? ? 1_555 C G 51 N7 ? ? B G 26 B G 51 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog83 hydrog ? ? C U 27 O2 ? ? ? 1_555 C A 53 N6 ? ? B U 27 B A 53 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog84 hydrog ? ? C A 28 N6 ? ? ? 1_555 C G 51 N3 ? ? B A 28 B G 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog85 hydrog ? ? C A 28 N7 ? ? ? 1_555 C G 51 N2 ? ? B A 28 B G 51 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog86 hydrog ? ? C A 29 N6 ? ? ? 1_555 C U 50 O2 ? ? B A 29 B U 50 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog87 hydrog ? ? C G 30 N1 ? ? ? 1_555 C C 49 N3 ? ? B G 30 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? C G 30 N2 ? ? ? 1_555 C C 49 O2 ? ? B G 30 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? C G 30 O6 ? ? ? 1_555 C C 49 N4 ? ? B G 30 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? C G 31 N1 ? ? ? 1_555 C C 48 N3 ? ? B G 31 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? C G 31 N2 ? ? ? 1_555 C C 48 O2 ? ? B G 31 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? C G 31 O6 ? ? ? 1_555 C C 48 N4 ? ? B G 31 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? C U 32 N3 ? ? ? 1_555 C G 47 O6 ? ? B U 32 B G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog94 hydrog ? ? C U 32 O2 ? ? ? 1_555 C G 47 N1 ? ? B U 32 B G 47 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog95 hydrog ? ? C C 33 N3 ? ? ? 1_555 C G 46 N1 ? ? B C 33 B G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? C C 33 N4 ? ? ? 1_555 C G 46 O6 ? ? B C 33 B G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? C C 33 O2 ? ? ? 1_555 C G 46 N2 ? ? B C 33 B G 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? C C 34 N3 ? ? ? 1_555 C G 45 N1 ? ? B C 34 B G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? C C 34 N4 ? ? ? 1_555 C G 45 O6 ? ? B C 34 B G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? C C 34 O2 ? ? ? 1_555 C G 45 N2 ? ? B C 34 B G 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 5 D . ? THR 6 C ARG 6 D ? ARG 7 C 1 7.59 2 ARG 6 D . ? ARG 7 C PRO 7 D ? PRO 8 C 1 -4.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE B 39 ? VAL B 44 ? ILE G 40 VAL G 45 AA1 2 GLN B 53 ? PHE B 58 ? GLN G 54 PHE G 59 AA1 3 THR B 10 ? ASN B 14 ? THR G 11 ASN G 15 AA1 4 ARG B 82 ? TYR B 85 ? ARG G 83 TYR G 86 AA2 1 PRO B 75 ? PHE B 76 ? PRO G 76 PHE G 77 AA2 2 LYS B 79 ? PRO B 80 ? LYS G 80 PRO G 81 AA3 1 ILE D 39 ? LEU D 43 ? ILE C 40 LEU C 44 AA3 2 ALA D 54 ? PHE D 58 ? ALA C 55 PHE C 59 AA3 3 THR D 10 ? ASN D 14 ? THR C 11 ASN C 15 AA3 4 ARG D 82 ? TYR D 85 ? ARG C 83 TYR C 86 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP B 41 ? N ASP G 42 O ILE B 57 ? O ILE G 58 AA1 2 3 O ALA B 54 ? O ALA G 55 N ILE B 13 ? N ILE G 14 AA1 3 4 N TYR B 12 ? N TYR G 13 O GLN B 84 ? O GLN G 85 AA2 1 2 N PHE B 76 ? N PHE G 77 O LYS B 79 ? O LYS G 80 AA3 1 2 N ASP D 41 ? N ASP C 42 O ILE D 57 ? O ILE C 58 AA3 2 3 O ALA D 54 ? O ALA C 55 N ILE D 13 ? N ILE C 14 AA3 3 4 N TYR D 12 ? N TYR C 13 O GLN D 84 ? O GLN C 85 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 "O2'" _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 U _pdbx_validate_close_contact.auth_seq_id_1 21 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 "O2'" _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 G _pdbx_validate_close_contact.auth_seq_id_2 54 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.07 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C2 A C 7 ? ? N3 A C 7 ? ? C4 A C 7 ? ? 116.79 119.90 -3.11 0.50 N 2 1 C5 A C 7 ? ? C6 A C 7 ? ? N1 A C 7 ? ? 117.79 121.00 -3.21 0.50 N 3 1 N3 A U 37 ? ? C2 A U 37 ? ? O2 A U 37 ? ? 117.56 122.20 -4.64 0.70 N 4 1 C8 A G 38 ? ? N9 A G 38 ? ? C4 A G 38 ? ? 103.31 106.40 -3.09 0.40 N 5 1 N3 A G 38 ? ? C4 A G 38 ? ? N9 A G 38 ? ? 121.75 126.00 -4.25 0.60 N 6 1 C5 A C 44 ? ? C6 A C 44 ? ? N1 A C 44 ? ? 124.43 121.00 3.43 0.50 N 7 1 C G LYS 80 ? ? N G PRO 81 ? ? CA G PRO 81 ? ? 128.70 119.30 9.40 1.50 Y 8 1 C4 B G 2 ? ? N9 B G 2 ? ? "C1'" B G 2 ? ? 117.48 126.50 -9.02 1.30 N 9 1 "C3'" B U 17 ? ? "C2'" B U 17 ? ? "C1'" B U 17 ? ? 96.81 101.30 -4.49 0.70 N 10 1 "C3'" B G 18 ? ? "C2'" B G 18 ? ? "C1'" B G 18 ? ? 96.87 101.30 -4.43 0.70 N 11 1 N3 B G 59 ? ? C4 B G 59 ? ? N9 B G 59 ? ? 122.25 126.00 -3.75 0.60 N 12 1 C4 B G 59 ? ? N9 B G 59 ? ? "C1'" B G 59 ? ? 118.51 126.50 -7.99 1.30 N 13 1 C C ARG 7 ? ? N C PRO 8 ? ? CA C PRO 8 ? ? 142.39 127.00 15.39 2.40 Y 14 1 C C ARG 7 ? ? N C PRO 8 ? ? CD C PRO 8 ? ? 106.36 120.60 -14.24 2.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO G 8 ? ? -46.77 158.55 2 1 SER G 48 ? ? -69.20 -179.67 3 1 VAL G 62 ? ? -44.60 10.55 4 1 ALA G 65 ? ? -33.34 -75.90 5 1 ALA G 87 ? ? -55.50 -125.82 6 1 LYS G 88 ? ? -171.58 -6.46 7 1 THR G 89 ? ? -157.90 -96.90 8 1 ASP G 90 ? ? 65.75 122.28 9 1 ARG C 7 ? ? -110.46 -72.28 10 1 LYS C 22 ? ? -47.09 170.89 11 1 LYS C 23 ? ? -69.23 -86.17 12 1 SER C 48 ? ? -52.45 172.39 13 1 MET C 51 ? ? -103.91 76.67 14 1 GLN C 73 ? ? -38.23 121.32 15 1 PRO C 76 ? ? -45.08 39.56 16 1 TYR C 78 ? ? 38.96 61.25 17 1 ASP C 79 ? ? 70.05 -9.83 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 105 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.72 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A G 22 ? A G 22 2 1 Y 1 A G 23 ? A G 23 3 1 Y 1 A A 24 ? A A 24 4 1 Y 1 G ALA 2 ? B ALA 1 5 1 Y 1 G VAL 3 ? B VAL 2 6 1 Y 1 G PRO 4 ? B PRO 3 7 1 Y 1 G GLU 5 ? B GLU 4 8 1 Y 1 G THR 6 ? B THR 5 9 1 Y 1 G ILE 93 ? B ILE 92 10 1 Y 1 G ILE 94 ? B ILE 93 11 1 Y 1 G ALA 95 ? B ALA 94 12 1 Y 1 G LYS 96 ? B LYS 95 13 1 Y 1 G MET 97 ? B MET 96 14 1 Y 1 G LYS 98 ? B LYS 97 15 1 Y 1 B G 22 ? C G 22 16 1 Y 1 B G 23 ? C G 23 17 1 Y 1 B A 24 ? C A 24 18 1 Y 1 C ALA 2 ? D ALA 1 19 1 Y 1 C VAL 3 ? D VAL 2 20 1 Y 1 C PRO 4 ? D PRO 3 21 1 Y 1 C GLU 5 ? D GLU 4 22 1 Y 1 C ILE 93 ? D ILE 92 23 1 Y 1 C ILE 94 ? D ILE 93 24 1 Y 1 C ALA 95 ? D ALA 94 25 1 Y 1 C LYS 96 ? D LYS 95 26 1 Y 1 C MET 97 ? D MET 96 27 1 Y 1 C LYS 98 ? D LYS 97 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 PHE N N N N 346 PHE CA C N S 347 PHE C C N N 348 PHE O O N N 349 PHE CB C N N 350 PHE CG C Y N 351 PHE CD1 C Y N 352 PHE CD2 C Y N 353 PHE CE1 C Y N 354 PHE CE2 C Y N 355 PHE CZ C Y N 356 PHE OXT O N N 357 PHE H H N N 358 PHE H2 H N N 359 PHE HA H N N 360 PHE HB2 H N N 361 PHE HB3 H N N 362 PHE HD1 H N N 363 PHE HD2 H N N 364 PHE HE1 H N N 365 PHE HE2 H N N 366 PHE HZ H N N 367 PHE HXT H N N 368 PRO N N N N 369 PRO CA C N S 370 PRO C C N N 371 PRO O O N N 372 PRO CB C N N 373 PRO CG C N N 374 PRO CD C N N 375 PRO OXT O N N 376 PRO H H N N 377 PRO HA H N N 378 PRO HB2 H N N 379 PRO HB3 H N N 380 PRO HG2 H N N 381 PRO HG3 H N N 382 PRO HD2 H N N 383 PRO HD3 H N N 384 PRO HXT H N N 385 SER N N N N 386 SER CA C N S 387 SER C C N N 388 SER O O N N 389 SER CB C N N 390 SER OG O N N 391 SER OXT O N N 392 SER H H N N 393 SER H2 H N N 394 SER HA H N N 395 SER HB2 H N N 396 SER HB3 H N N 397 SER HG H N N 398 SER HXT H N N 399 THR N N N N 400 THR CA C N S 401 THR C C N N 402 THR O O N N 403 THR CB C N R 404 THR OG1 O N N 405 THR CG2 C N N 406 THR OXT O N N 407 THR H H N N 408 THR H2 H N N 409 THR HA H N N 410 THR HB H N N 411 THR HG1 H N N 412 THR HG21 H N N 413 THR HG22 H N N 414 THR HG23 H N N 415 THR HXT H N N 416 TYR N N N N 417 TYR CA C N S 418 TYR C C N N 419 TYR O O N N 420 TYR CB C N N 421 TYR CG C Y N 422 TYR CD1 C Y N 423 TYR CD2 C Y N 424 TYR CE1 C Y N 425 TYR CE2 C Y N 426 TYR CZ C Y N 427 TYR OH O N N 428 TYR OXT O N N 429 TYR H H N N 430 TYR H2 H N N 431 TYR HA H N N 432 TYR HB2 H N N 433 TYR HB3 H N N 434 TYR HD1 H N N 435 TYR HD2 H N N 436 TYR HE1 H N N 437 TYR HE2 H N N 438 TYR HH H N N 439 TYR HXT H N N 440 U OP3 O N N 441 U P P N N 442 U OP1 O N N 443 U OP2 O N N 444 U "O5'" O N N 445 U "C5'" C N N 446 U "C4'" C N R 447 U "O4'" O N N 448 U "C3'" C N S 449 U "O3'" O N N 450 U "C2'" C N R 451 U "O2'" O N N 452 U "C1'" C N R 453 U N1 N N N 454 U C2 C N N 455 U O2 O N N 456 U N3 N N N 457 U C4 C N N 458 U O4 O N N 459 U C5 C N N 460 U C6 C N N 461 U HOP3 H N N 462 U HOP2 H N N 463 U "H5'" H N N 464 U "H5''" H N N 465 U "H4'" H N N 466 U "H3'" H N N 467 U "HO3'" H N N 468 U "H2'" H N N 469 U "HO2'" H N N 470 U "H1'" H N N 471 U H3 H N N 472 U H5 H N N 473 U H6 H N N 474 VAL N N N N 475 VAL CA C N S 476 VAL C C N N 477 VAL O O N N 478 VAL CB C N N 479 VAL CG1 C N N 480 VAL CG2 C N N 481 VAL OXT O N N 482 VAL H H N N 483 VAL H2 H N N 484 VAL HA H N N 485 VAL HB H N N 486 VAL HG11 H N N 487 VAL HG12 H N N 488 VAL HG13 H N N 489 VAL HG21 H N N 490 VAL HG22 H N N 491 VAL HG23 H N N 492 VAL HXT H N N 493 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 HOH O H1 sing N N 252 HOH O H2 sing N N 253 ILE N CA sing N N 254 ILE N H sing N N 255 ILE N H2 sing N N 256 ILE CA C sing N N 257 ILE CA CB sing N N 258 ILE CA HA sing N N 259 ILE C O doub N N 260 ILE C OXT sing N N 261 ILE CB CG1 sing N N 262 ILE CB CG2 sing N N 263 ILE CB HB sing N N 264 ILE CG1 CD1 sing N N 265 ILE CG1 HG12 sing N N 266 ILE CG1 HG13 sing N N 267 ILE CG2 HG21 sing N N 268 ILE CG2 HG22 sing N N 269 ILE CG2 HG23 sing N N 270 ILE CD1 HD11 sing N N 271 ILE CD1 HD12 sing N N 272 ILE CD1 HD13 sing N N 273 ILE OXT HXT sing N N 274 LEU N CA sing N N 275 LEU N H sing N N 276 LEU N H2 sing N N 277 LEU CA C sing N N 278 LEU CA CB sing N N 279 LEU CA HA sing N N 280 LEU C O doub N N 281 LEU C OXT sing N N 282 LEU CB CG sing N N 283 LEU CB HB2 sing N N 284 LEU CB HB3 sing N N 285 LEU CG CD1 sing N N 286 LEU CG CD2 sing N N 287 LEU CG HG sing N N 288 LEU CD1 HD11 sing N N 289 LEU CD1 HD12 sing N N 290 LEU CD1 HD13 sing N N 291 LEU CD2 HD21 sing N N 292 LEU CD2 HD22 sing N N 293 LEU CD2 HD23 sing N N 294 LEU OXT HXT sing N N 295 LYS N CA sing N N 296 LYS N H sing N N 297 LYS N H2 sing N N 298 LYS CA C sing N N 299 LYS CA CB sing N N 300 LYS CA HA sing N N 301 LYS C O doub N N 302 LYS C OXT sing N N 303 LYS CB CG sing N N 304 LYS CB HB2 sing N N 305 LYS CB HB3 sing N N 306 LYS CG CD sing N N 307 LYS CG HG2 sing N N 308 LYS CG HG3 sing N N 309 LYS CD CE sing N N 310 LYS CD HD2 sing N N 311 LYS CD HD3 sing N N 312 LYS CE NZ sing N N 313 LYS CE HE2 sing N N 314 LYS CE HE3 sing N N 315 LYS NZ HZ1 sing N N 316 LYS NZ HZ2 sing N N 317 LYS NZ HZ3 sing N N 318 LYS OXT HXT sing N N 319 MET N CA sing N N 320 MET N H sing N N 321 MET N H2 sing N N 322 MET CA C sing N N 323 MET CA CB sing N N 324 MET CA HA sing N N 325 MET C O doub N N 326 MET C OXT sing N N 327 MET CB CG sing N N 328 MET CB HB2 sing N N 329 MET CB HB3 sing N N 330 MET CG SD sing N N 331 MET CG HG2 sing N N 332 MET CG HG3 sing N N 333 MET SD CE sing N N 334 MET CE HE1 sing N N 335 MET CE HE2 sing N N 336 MET CE HE3 sing N N 337 MET OXT HXT sing N N 338 PHE N CA sing N N 339 PHE N H sing N N 340 PHE N H2 sing N N 341 PHE CA C sing N N 342 PHE CA CB sing N N 343 PHE CA HA sing N N 344 PHE C O doub N N 345 PHE C OXT sing N N 346 PHE CB CG sing N N 347 PHE CB HB2 sing N N 348 PHE CB HB3 sing N N 349 PHE CG CD1 doub Y N 350 PHE CG CD2 sing Y N 351 PHE CD1 CE1 sing Y N 352 PHE CD1 HD1 sing N N 353 PHE CD2 CE2 doub Y N 354 PHE CD2 HD2 sing N N 355 PHE CE1 CZ doub Y N 356 PHE CE1 HE1 sing N N 357 PHE CE2 CZ sing Y N 358 PHE CE2 HE2 sing N N 359 PHE CZ HZ sing N N 360 PHE OXT HXT sing N N 361 PRO N CA sing N N 362 PRO N CD sing N N 363 PRO N H sing N N 364 PRO CA C sing N N 365 PRO CA CB sing N N 366 PRO CA HA sing N N 367 PRO C O doub N N 368 PRO C OXT sing N N 369 PRO CB CG sing N N 370 PRO CB HB2 sing N N 371 PRO CB HB3 sing N N 372 PRO CG CD sing N N 373 PRO CG HG2 sing N N 374 PRO CG HG3 sing N N 375 PRO CD HD2 sing N N 376 PRO CD HD3 sing N N 377 PRO OXT HXT sing N N 378 SER N CA sing N N 379 SER N H sing N N 380 SER N H2 sing N N 381 SER CA C sing N N 382 SER CA CB sing N N 383 SER CA HA sing N N 384 SER C O doub N N 385 SER C OXT sing N N 386 SER CB OG sing N N 387 SER CB HB2 sing N N 388 SER CB HB3 sing N N 389 SER OG HG sing N N 390 SER OXT HXT sing N N 391 THR N CA sing N N 392 THR N H sing N N 393 THR N H2 sing N N 394 THR CA C sing N N 395 THR CA CB sing N N 396 THR CA HA sing N N 397 THR C O doub N N 398 THR C OXT sing N N 399 THR CB OG1 sing N N 400 THR CB CG2 sing N N 401 THR CB HB sing N N 402 THR OG1 HG1 sing N N 403 THR CG2 HG21 sing N N 404 THR CG2 HG22 sing N N 405 THR CG2 HG23 sing N N 406 THR OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 U OP3 P sing N N 432 U OP3 HOP3 sing N N 433 U P OP1 doub N N 434 U P OP2 sing N N 435 U P "O5'" sing N N 436 U OP2 HOP2 sing N N 437 U "O5'" "C5'" sing N N 438 U "C5'" "C4'" sing N N 439 U "C5'" "H5'" sing N N 440 U "C5'" "H5''" sing N N 441 U "C4'" "O4'" sing N N 442 U "C4'" "C3'" sing N N 443 U "C4'" "H4'" sing N N 444 U "O4'" "C1'" sing N N 445 U "C3'" "O3'" sing N N 446 U "C3'" "C2'" sing N N 447 U "C3'" "H3'" sing N N 448 U "O3'" "HO3'" sing N N 449 U "C2'" "O2'" sing N N 450 U "C2'" "C1'" sing N N 451 U "C2'" "H2'" sing N N 452 U "O2'" "HO2'" sing N N 453 U "C1'" N1 sing N N 454 U "C1'" "H1'" sing N N 455 U N1 C2 sing N N 456 U N1 C6 sing N N 457 U C2 O2 doub N N 458 U C2 N3 sing N N 459 U N3 C4 sing N N 460 U N3 H3 sing N N 461 U C4 O4 doub N N 462 U C4 C5 sing N N 463 U C5 C6 doub N N 464 U C5 H5 sing N N 465 U C6 H6 sing N N 466 VAL N CA sing N N 467 VAL N H sing N N 468 VAL N H2 sing N N 469 VAL CA C sing N N 470 VAL CA CB sing N N 471 VAL CA HA sing N N 472 VAL C O doub N N 473 VAL C OXT sing N N 474 VAL CB CG1 sing N N 475 VAL CB CG2 sing N N 476 VAL CB HB sing N N 477 VAL CG1 HG11 sing N N 478 VAL CG1 HG12 sing N N 479 VAL CG1 HG13 sing N N 480 VAL CG2 HG21 sing N N 481 VAL CG2 HG22 sing N N 482 VAL CG2 HG23 sing N N 483 VAL OXT HXT sing N N 484 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5DDO 'double helix' 5DDO 'a-form double helix' 5DDO 'hairpin loop' 5DDO tetraloop 5DDO 'bulge loop' 5DDO 'mismatched base pair' 5DDO 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 A G 59 1_555 -0.529 -0.257 0.053 6.317 -13.761 -1.287 1 A_C1:G59_A A 1 ? A 59 ? 19 1 1 A G 2 1_555 A C 58 1_555 -1.009 -0.198 0.326 1.122 -10.030 -4.024 2 A_G2:C58_A A 2 ? A 58 ? 19 1 1 A U 3 1_555 A A 57 1_555 -0.902 0.336 -0.117 -1.710 -13.767 -8.539 3 A_U3:A57_A A 3 ? A 57 ? 20 1 1 A U 4 1_555 A A 56 1_555 -0.648 -0.376 0.093 4.219 -1.250 -4.429 4 A_U4:A56_A A 4 ? A 56 ? 20 1 1 A G 5 1_555 A C 55 1_555 -0.166 -0.249 -0.159 7.230 -0.015 5.238 5 A_G5:C55_A A 5 ? A 55 ? 19 1 1 A G 6 1_555 A U 21 1_555 -2.794 -0.856 0.130 0.704 -8.158 -13.749 6 A_G6:U21_A A 6 ? A 21 ? 28 1 1 A C 7 1_555 A G 20 1_555 0.086 -0.156 -0.091 7.178 -10.634 -5.391 7 A_C7:G20_A A 7 ? A 20 ? 19 1 1 A C 8 1_555 A G 19 1_555 -0.139 -0.286 0.001 -1.423 -4.371 -0.207 8 A_C8:G19_A A 8 ? A 19 ? 19 1 1 A C 9 1_555 A G 18 1_555 0.036 -0.437 -0.048 3.564 -7.551 -1.568 9 A_C9:G18_A A 9 ? A 18 ? 19 1 1 A A 10 1_555 A U 17 1_555 -0.314 -0.109 0.279 0.029 -7.835 -0.909 10 A_A10:U17_A A 10 ? A 17 ? 20 1 1 A G 11 1_555 A C 16 1_555 0.179 -0.107 -0.130 2.861 1.467 2.307 11 A_G11:C16_A A 11 ? A 16 ? 19 1 1 A G 12 1_555 A A 15 1_555 6.990 -5.607 1.027 27.047 -1.531 -31.772 12 A_G12:A15_A A 12 ? A 15 ? ? ? 1 A A 25 1_555 A A 53 1_555 -5.797 5.000 -0.253 -18.236 -18.358 -179.091 13 A_A25:A53_A A 25 ? A 53 ? 2 8 1 A U 27 1_555 A A 52 1_555 4.040 -1.375 -0.377 10.605 -11.532 -106.647 14 A_U27:A52_A A 27 ? A 52 ? 24 4 1 A A 28 1_555 A G 51 1_555 -6.928 -3.936 -0.578 9.671 -7.220 -1.168 15 A_A28:G51_A A 28 ? A 51 ? 11 9 1 A A 29 1_555 A U 50 1_555 -0.771 -0.296 0.089 10.088 -18.766 0.317 16 A_A29:U50_A A 29 ? A 50 ? 20 1 1 A G 30 1_555 A C 49 1_555 0.847 -0.240 -2.148 -36.162 -9.292 -12.132 17 A_G30:C49_A A 30 ? A 49 ? 19 1 1 A G 31 1_555 A C 48 1_555 0.020 -0.096 -0.633 -20.303 -27.614 0.325 18 A_G31:C48_A A 31 ? A 48 ? 19 1 1 A U 32 1_555 A G 47 1_555 2.013 -0.421 -0.074 1.578 -11.971 8.087 19 A_U32:G47_A A 32 ? A 47 ? 28 1 1 A C 33 1_555 A G 46 1_555 -0.486 -0.236 -0.180 2.876 -5.858 0.900 20 A_C33:G46_A A 33 ? A 46 ? 19 1 1 A C 34 1_555 A G 45 1_555 -0.234 -0.556 -0.588 12.900 0.679 -9.704 21 A_C34:G45_A A 34 ? A 45 ? 19 1 1 C C 1 1_555 C G 59 1_555 2.073 -0.597 -0.573 8.281 14.720 -25.093 22 B_C1:G59_B B 1 ? B 59 ? ? 1 1 C G 2 1_555 C C 58 1_555 -0.014 -0.323 -0.377 5.919 28.162 -29.327 23 B_G2:C58_B B 2 ? B 58 ? ? 1 1 C U 3 1_555 C A 57 1_555 0.239 -0.295 0.052 -6.775 22.645 -7.533 24 B_U3:A57_B B 3 ? B 57 ? 20 1 1 C U 4 1_555 C A 56 1_555 -0.175 -0.175 0.123 -3.895 -11.008 -11.048 25 B_U4:A56_B B 4 ? B 56 ? 20 1 1 C G 5 1_555 C C 55 1_555 0.302 -0.296 -0.145 -5.283 -5.069 8.310 26 B_G5:C55_B B 5 ? B 55 ? 22 1 1 C G 6 1_555 C U 21 1_555 -1.804 -0.932 0.308 -2.184 -6.197 -13.737 27 B_G6:U21_B B 6 ? B 21 ? 28 1 1 C C 7 1_555 C G 20 1_555 0.355 -0.159 0.436 3.782 -12.088 3.534 28 B_C7:G20_B B 7 ? B 20 ? 19 1 1 C C 8 1_555 C G 19 1_555 0.109 -0.434 0.209 0.598 -16.495 -7.762 29 B_C8:G19_B B 8 ? B 19 ? 19 1 1 C C 9 1_555 C G 18 1_555 -0.655 -0.238 0.083 -2.808 -8.472 -3.616 30 B_C9:G18_B B 9 ? B 18 ? 19 1 1 C A 10 1_555 C U 17 1_555 0.977 0.218 0.357 3.710 -1.429 -0.935 31 B_A10:U17_B B 10 ? B 17 ? 20 1 1 C G 11 1_555 C C 16 1_555 0.676 0.540 -0.228 11.000 -5.603 7.270 32 B_G11:C16_B B 11 ? B 16 ? ? 1 1 C G 12 1_555 C A 15 1_555 0.916 -6.179 0.660 13.193 -14.117 -105.418 33 B_G12:A15_B B 12 ? B 15 ? ? ? 1 C U 27 1_555 C A 53 1_555 5.709 -2.263 0.116 8.506 -18.053 -56.076 34 B_U27:A53_B B 27 ? B 53 ? ? ? 1 C A 28 1_555 C G 51 1_555 -7.304 -4.760 0.609 8.416 0.921 -6.541 35 B_A28:G51_B B 28 ? B 51 ? 11 10 1 C A 29 1_555 C U 50 1_555 -4.333 -1.084 -0.635 16.034 -19.732 4.739 36 B_A29:U50_B B 29 ? B 50 ? ? ? 1 C G 30 1_555 C C 49 1_555 -0.407 -0.498 0.390 2.098 -4.693 4.675 37 B_G30:C49_B B 30 ? B 49 ? 19 1 1 C G 31 1_555 C C 48 1_555 -0.540 -0.181 -1.274 -23.008 -16.633 -3.380 38 B_G31:C48_B B 31 ? B 48 ? 19 1 1 C U 32 1_555 C G 47 1_555 1.304 -0.122 -0.714 5.902 -10.086 -0.119 39 B_U32:G47_B B 32 ? B 47 ? 28 1 1 C C 33 1_555 C G 46 1_555 -1.019 -0.238 -0.639 2.729 2.491 -1.637 40 B_C33:G46_B B 33 ? B 46 ? 19 1 1 C C 34 1_555 C G 45 1_555 -0.173 -0.298 -0.513 7.509 8.434 -7.198 41 B_C34:G45_B B 34 ? B 45 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 A G 59 1_555 A G 2 1_555 A C 58 1_555 0.238 -2.098 3.185 -4.381 6.363 27.454 -5.567 -1.381 2.575 13.083 9.007 28.500 1 AA_C1G2:C58G59_AA A 1 ? A 59 ? A 2 ? A 58 ? 1 A G 2 1_555 A C 58 1_555 A U 3 1_555 A A 57 1_555 -0.649 -1.647 3.325 2.501 6.733 31.334 -4.132 1.603 2.859 12.265 -4.556 32.126 2 AA_G2U3:A57C58_AA A 2 ? A 58 ? A 3 ? A 57 ? 1 A U 3 1_555 A A 57 1_555 A U 4 1_555 A A 56 1_555 0.416 -1.621 3.236 -2.226 7.751 32.788 -3.963 -1.053 2.758 13.478 3.872 33.738 3 AA_U3U4:A56A57_AA A 3 ? A 57 ? A 4 ? A 56 ? 1 A U 4 1_555 A A 56 1_555 A G 5 1_555 A C 55 1_555 1.232 -1.674 3.126 -0.100 8.119 29.859 -4.539 -2.329 2.588 15.401 0.190 30.919 4 AA_U4G5:C55A56_AA A 4 ? A 56 ? A 5 ? A 55 ? 1 A G 5 1_555 A C 55 1_555 A G 6 1_555 A U 21 1_555 1.829 -1.841 3.198 -5.332 8.791 40.302 -3.424 -3.081 2.508 12.515 7.590 41.540 5 AA_G5G6:U21C55_AA A 5 ? A 55 ? A 6 ? A 21 ? 1 A G 6 1_555 A U 21 1_555 A C 7 1_555 A G 20 1_555 0.362 -1.372 3.078 0.165 3.584 45.633 -2.053 -0.452 2.969 4.612 -0.212 45.767 6 AA_G6C7:G20U21_AA A 6 ? A 21 ? A 7 ? A 20 ? 1 A C 7 1_555 A G 20 1_555 A C 8 1_555 A G 19 1_555 -0.108 -1.939 3.445 -1.029 7.361 34.444 -4.294 0.026 2.982 12.254 1.712 35.213 7 AA_C7C8:G19G20_AA A 7 ? A 20 ? A 8 ? A 19 ? 1 A C 8 1_555 A G 19 1_555 A C 9 1_555 A G 18 1_555 -0.400 -1.641 3.063 1.289 5.945 28.535 -4.404 1.043 2.653 11.891 -2.577 29.163 8 AA_C8C9:G18G19_AA A 8 ? A 19 ? A 9 ? A 18 ? 1 A C 9 1_555 A G 18 1_555 A A 10 1_555 A U 17 1_555 0.811 -1.835 3.167 -1.058 10.556 30.296 -4.982 -1.635 2.381 19.463 1.952 32.059 9 AA_C9A10:U17G18_AA A 9 ? A 18 ? A 10 ? A 17 ? 1 A A 10 1_555 A U 17 1_555 A G 11 1_555 A C 16 1_555 0.516 -2.223 3.221 5.727 5.854 31.684 -4.899 0.014 2.824 10.505 -10.276 32.699 10 AA_A10G11:C16U17_AA A 10 ? A 17 ? A 11 ? A 16 ? 1 A G 11 1_555 A C 16 1_555 A G 12 1_555 A A 15 1_555 -1.988 -1.478 2.706 -3.612 10.957 58.565 -1.932 1.854 2.526 11.082 3.654 59.592 11 AA_G11G12:A15C16_AA A 11 ? A 16 ? A 12 ? A 15 ? 1 A A 25 1_555 A A 53 1_555 A U 27 1_555 A A 52 1_555 1.315 -2.879 1.504 111.320 132.313 91.129 -1.695 -0.444 0.126 66.931 -56.311 175.040 12 AA_A25U27:A52A53_AA A 25 ? A 53 ? A 27 ? A 52 ? 1 A U 27 1_555 A A 52 1_555 A A 28 1_555 A G 51 1_555 5.799 -1.013 3.522 -1.543 3.878 -7.328 -6.658 34.047 4.587 -27.586 -10.977 -8.432 13 AA_U27A28:G51A52_AA A 27 ? A 52 ? A 28 ? A 51 ? 1 A A 28 1_555 A G 51 1_555 A A 29 1_555 A U 50 1_555 0.369 -0.989 3.499 -4.150 -0.746 57.623 -0.981 -0.619 3.478 -0.773 4.299 57.764 14 AA_A28A29:U50G51_AA A 28 ? A 51 ? A 29 ? A 50 ? 1 A A 29 1_555 A U 50 1_555 A G 30 1_555 A C 49 1_555 -1.394 -2.134 4.724 14.522 14.060 36.129 -4.947 3.960 2.982 20.791 -21.476 41.234 15 AA_A29G30:C49U50_AA A 29 ? A 50 ? A 30 ? A 49 ? 1 A G 30 1_555 A C 49 1_555 A G 31 1_555 A C 48 1_555 0.914 -1.249 3.178 -10.474 21.166 21.846 -5.237 -3.126 1.071 42.851 21.205 32.065 16 AA_G30G31:C48C49_AA A 30 ? A 49 ? A 31 ? A 48 ? 1 A G 31 1_555 A C 48 1_555 A U 32 1_555 A G 47 1_555 0.075 -1.101 2.729 -7.090 4.056 34.299 -2.309 -0.982 2.521 6.760 11.815 35.230 17 AA_G31U32:G47C48_AA A 31 ? A 48 ? A 32 ? A 47 ? 1 A U 32 1_555 A G 47 1_555 A C 33 1_555 A G 46 1_555 -0.509 -2.275 2.922 -0.229 12.279 21.355 -8.030 1.145 1.424 30.137 0.561 24.599 18 AA_U32C33:G46G47_AA A 32 ? A 47 ? A 33 ? A 46 ? 1 A C 33 1_555 A G 46 1_555 A C 34 1_555 A G 45 1_555 -0.133 -1.834 3.172 2.485 -4.522 29.535 -2.604 0.774 3.386 -8.786 -4.828 29.973 19 AA_C33C34:G45G46_AA A 33 ? A 46 ? A 34 ? A 45 ? 1 C C 1 1_555 C G 59 1_555 C G 2 1_555 C C 58 1_555 -0.126 -2.543 3.757 -1.444 2.796 10.290 -18.303 -1.775 2.951 15.133 7.814 10.760 20 BB_C1G2:C58G59_BB B 1 ? B 59 ? B 2 ? B 58 ? 1 C G 2 1_555 C C 58 1_555 C U 3 1_555 C A 57 1_555 1.259 -1.891 4.364 -6.363 3.805 32.754 -4.066 -3.503 3.821 6.642 11.106 33.560 21 BB_G2U3:A57C58_BB B 2 ? B 58 ? B 3 ? B 57 ? 1 C U 3 1_555 C A 57 1_555 C U 4 1_555 C A 56 1_555 0.369 -2.733 3.145 0.878 13.599 27.747 -7.192 -0.561 1.664 26.433 -1.707 30.854 22 BB_U3U4:A56A57_BB B 3 ? B 57 ? B 4 ? B 56 ? 1 C U 4 1_555 C A 56 1_555 C G 5 1_555 C C 55 1_555 1.399 -1.569 3.055 2.286 5.313 34.220 -3.375 -2.027 2.871 8.950 -3.850 34.691 23 BB_U4G5:C55A56_BB B 4 ? B 56 ? B 5 ? B 55 ? 1 C G 5 1_555 C C 55 1_555 C G 6 1_555 C U 21 1_555 1.636 -1.354 2.914 -7.057 5.625 47.455 -2.022 -2.461 2.494 6.916 8.677 48.257 24 BB_G5G6:U21C55_BB B 5 ? B 55 ? B 6 ? B 21 ? 1 C G 6 1_555 C U 21 1_555 C C 7 1_555 C G 20 1_555 0.242 -1.716 3.158 -2.780 0.749 36.286 -2.848 -0.758 3.097 1.201 4.456 36.397 25 BB_G6C7:G20U21_BB B 6 ? B 21 ? B 7 ? B 20 ? 1 C C 7 1_555 C G 20 1_555 C C 8 1_555 C G 19 1_555 -0.432 -1.964 3.147 -1.006 8.475 33.761 -4.438 0.585 2.604 14.310 1.699 34.792 26 BB_C7C8:G19G20_BB B 7 ? B 20 ? B 8 ? B 19 ? 1 C C 8 1_555 C G 19 1_555 C C 9 1_555 C G 18 1_555 0.017 -1.627 3.250 0.925 5.023 26.949 -4.609 0.180 2.903 10.657 -1.961 27.420 27 BB_C8C9:G18G19_BB B 8 ? B 19 ? B 9 ? B 18 ? 1 C C 9 1_555 C G 18 1_555 C A 10 1_555 C U 17 1_555 0.164 -1.182 3.087 -1.474 2.614 37.662 -2.139 -0.431 2.993 4.041 2.279 37.778 28 BB_C9A10:U17G18_BB B 9 ? B 18 ? B 10 ? B 17 ? 1 C A 10 1_555 C U 17 1_555 C G 11 1_555 C C 16 1_555 0.541 -1.664 3.125 9.505 9.636 27.582 -4.860 0.669 2.469 18.842 -18.585 30.666 29 BB_A10G11:C16U17_BB B 10 ? B 17 ? B 11 ? B 16 ? 1 C G 11 1_555 C C 16 1_555 C G 12 1_555 C A 15 1_555 -0.616 -1.095 3.098 1.822 14.123 102.743 -0.887 0.417 2.968 9.010 -1.162 103.447 30 BB_G11G12:A15C16_BB B 11 ? B 16 ? B 12 ? B 15 ? 1 C A 28 1_555 C G 51 1_555 C A 29 1_555 C U 50 1_555 0.866 -1.247 3.069 2.640 9.912 41.235 -2.635 -0.953 2.759 13.818 -3.681 42.438 31 BB_A28A29:U50G51_BB B 28 ? B 51 ? B 29 ? B 50 ? 1 C A 29 1_555 C U 50 1_555 C G 30 1_555 C C 49 1_555 0.444 -1.960 3.391 -16.919 14.354 44.325 -3.352 -1.715 2.380 17.768 20.943 49.317 32 BB_A29G30:C49U50_BB B 29 ? B 50 ? B 30 ? B 49 ? 1 C G 30 1_555 C C 49 1_555 C G 31 1_555 C C 48 1_555 -0.478 -2.197 3.495 10.828 22.100 39.047 -4.532 1.453 1.871 29.753 -14.578 45.898 33 BB_G30G31:C48C49_BB B 30 ? B 49 ? B 31 ? B 48 ? 1 C G 31 1_555 C C 48 1_555 C U 32 1_555 C G 47 1_555 -0.110 -0.904 2.452 -6.323 -0.785 37.945 -1.299 -0.427 2.456 -1.197 9.641 38.456 34 BB_G31U32:G47C48_BB B 31 ? B 48 ? B 32 ? B 47 ? 1 C U 32 1_555 C G 47 1_555 C C 33 1_555 C G 46 1_555 0.129 -1.987 3.234 -0.297 9.631 21.144 -7.799 -0.408 2.132 24.663 0.761 23.214 35 BB_U32C33:G46G47_BB B 32 ? B 47 ? B 33 ? B 46 ? 1 C C 33 1_555 C G 46 1_555 C C 34 1_555 C G 45 1_555 0.071 -1.853 3.156 -0.880 9.299 32.769 -4.484 -0.247 2.547 16.079 1.521 34.039 36 BB_C33C34:G45G46_BB B 33 ? B 46 ? B 34 ? B 45 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number '1 U19 CA179564' _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 5DDO _atom_sites.fract_transf_matrix[1][1] 0.012370 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001970 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010035 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011447 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_