HEADER TRANSFERASE 25-AUG-15 5DE2 TITLE STRUCTURAL MECHANISM OF NEK7 ACTIVATION BY NEK9-INDUCED DIMERISATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE NEK7; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NEVER IN MITOSIS A-RELATED KINASE 7,NIMA-RELATED PROTEIN COMPND 5 KINASE 7; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: SERINE/THREONINE-PROTEIN KINASE NEK9; COMPND 11 CHAIN: C, D; COMPND 12 SYNONYM: NERCC1 KINASE,NEVER IN MITOSIS A-RELATED KINASE 9,NIMA- COMPND 13 RELATED PROTEIN KINASE 9; COMPND 14 EC: 2.7.11.1; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NEK7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090 KEYWDS PROTEIN KINASE, MITOSIS, PROTEIN-PROTEIN INTERACTION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.HAQ,R.BAYLISS REVDAT 2 10-JAN-24 5DE2 1 REMARK REVDAT 1 11-NOV-15 5DE2 0 JRNL AUTH T.HAQ,M.W.RICHARDS,S.G.BURGESS,P.GALLEGO,S.YEOH,L.O'REGAN, JRNL AUTH 2 D.REVERTER,J.ROIG,A.M.FRY,R.BAYLISS JRNL TITL MECHANISTIC BASIS OF NEK7 ACTIVATION THROUGH NEK9 BINDING JRNL TITL 2 AND INDUCED DIMERIZATION. JRNL REF NAT COMMUN V. 6 8771 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26522158 JRNL DOI 10.1038/NCOMMS9771 REMARK 2 REMARK 2 RESOLUTION. 2.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18191 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 929 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.78 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.95 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2913 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2446 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2752 REMARK 3 BIN R VALUE (WORKING SET) : 0.2418 REMARK 3 BIN FREE R VALUE : 0.2963 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.53 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 161 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4430 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.73150 REMARK 3 B22 (A**2) : -0.73150 REMARK 3 B33 (A**2) : 1.46300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.351 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 2.103 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.342 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 1.944 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.347 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4546 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6145 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1595 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 107 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 654 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4546 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 578 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5048 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.44 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.63 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DE2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000213078. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18228 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.780 REMARK 200 RESOLUTION RANGE LOW (A) : 54.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : 0.96400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2WQM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE COMPOSITION OF THE RESERVOIR REMARK 280 BUFFER WAS: 0.2M POTASSIUM THIOCYANATE, 0.1M BIS-TRIS PROPANE PH REMARK 280 7.5, 20% (W/V) PEG 3350., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.87000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 103.74000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 103.74000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 51.87000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 GLN A 6 REMARK 465 GLY A 7 REMARK 465 MET A 8 REMARK 465 GLN A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 11 REMARK 465 PRO A 12 REMARK 465 VAL A 13 REMARK 465 PRO A 14 REMARK 465 GLN A 15 REMARK 465 PHE A 16 REMARK 465 GLN A 17 REMARK 465 PRO A 18 REMARK 465 GLN A 19 REMARK 465 LEU A 182 REMARK 465 GLY A 183 REMARK 465 ARG A 184 REMARK 465 PHE A 185 REMARK 465 PHE A 186 REMARK 465 SER A 187 REMARK 465 SER A 188 REMARK 465 LYS A 189 REMARK 465 THR A 190 REMARK 465 THR A 191 REMARK 465 ALA A 192 REMARK 465 ALA A 193 REMARK 465 HIS A 194 REMARK 465 SER A 195 REMARK 465 SER A 301 REMARK 465 SER A 302 REMARK 465 LEU A 303 REMARK 465 GLU A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 GLU B 3 REMARK 465 GLN B 4 REMARK 465 SER B 5 REMARK 465 GLN B 6 REMARK 465 GLY B 7 REMARK 465 MET B 8 REMARK 465 GLN B 9 REMARK 465 GLY B 10 REMARK 465 PRO B 11 REMARK 465 PRO B 12 REMARK 465 VAL B 13 REMARK 465 PRO B 14 REMARK 465 GLN B 15 REMARK 465 PHE B 16 REMARK 465 GLN B 17 REMARK 465 PRO B 18 REMARK 465 GLN B 19 REMARK 465 GLY B 181 REMARK 465 LEU B 182 REMARK 465 GLY B 183 REMARK 465 ARG B 184 REMARK 465 PHE B 185 REMARK 465 PHE B 186 REMARK 465 SER B 187 REMARK 465 SER B 188 REMARK 465 LYS B 189 REMARK 465 THR B 190 REMARK 465 THR B 191 REMARK 465 ALA B 192 REMARK 465 ALA B 193 REMARK 465 HIS B 194 REMARK 465 SER B 195 REMARK 465 LEU B 196 REMARK 465 VAL B 197 REMARK 465 GLY B 198 REMARK 465 THR B 199 REMARK 465 SER B 301 REMARK 465 SER B 302 REMARK 465 LEU B 303 REMARK 465 GLU B 304 REMARK 465 HIS B 305 REMARK 465 HIS B 306 REMARK 465 HIS B 307 REMARK 465 HIS B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 465 ASP C 826 REMARK 465 SER C 827 REMARK 465 PRO C 828 REMARK 465 ALA D 819 REMARK 465 GLU D 820 REMARK 465 PHE D 821 REMARK 465 ILE D 822 REMARK 465 PRO D 823 REMARK 465 MET D 824 REMARK 465 PRO D 825 REMARK 465 ASP D 826 REMARK 465 SER D 827 REMARK 465 PRO D 828 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 ARG A 35 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 LEU A 55 CG CD1 CD2 REMARK 470 ASP A 115 CG OD1 OD2 REMARK 470 LEU A 196 CG CD1 CD2 REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 GLU A 265 CG CD OE1 OE2 REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 ASP B 115 CG OD1 OD2 REMARK 470 ASP B 161 CG OD1 OD2 REMARK 470 LEU B 180 CG CD1 CD2 REMARK 470 ARG B 207 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 ASP B 239 CG OD1 OD2 REMARK 470 LYS B 240 CG CD CE NZ REMARK 470 GLU D 817 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 97.67 -63.67 REMARK 500 ARG A 160 -4.84 83.71 REMARK 500 ASP A 161 63.79 -162.14 REMARK 500 VAL A 197 -83.92 -106.40 REMARK 500 PHE B 68 -64.33 -96.91 REMARK 500 ASN B 90 81.91 -155.32 REMARK 500 ASP B 115 51.95 34.55 REMARK 500 ALA B 116 -73.85 -138.87 REMARK 500 LYS B 130 38.65 37.86 REMARK 500 ARG B 160 -12.68 79.72 REMARK 500 ASP B 161 66.67 -152.04 REMARK 500 HIS B 209 -86.85 -102.43 REMARK 500 ASN C 818 45.60 -95.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WQM RELATED DB: PDB REMARK 900 2WQM CONTAINS NEK7 REMARK 900 RELATED ID: 2WQN RELATED DB: PDB REMARK 900 2WQN CONTAINS NEK7 BOUND TO ADP DBREF 5DE2 A 1 302 UNP Q8TDX7 NEK7_HUMAN 1 302 DBREF 5DE2 B 1 302 UNP Q8TDX7 NEK7_HUMAN 1 302 DBREF 5DE2 C 810 828 UNP Q8K1R7 NEK9_MOUSE 817 835 DBREF 5DE2 D 810 828 UNP Q8K1R7 NEK9_MOUSE 817 835 SEQADV 5DE2 PHE A 97 UNP Q8TDX7 TYR 97 ENGINEERED MUTATION SEQADV 5DE2 LEU A 303 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 GLU A 304 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS A 305 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS A 306 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS A 307 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS A 308 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS A 309 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS A 310 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 PHE B 97 UNP Q8TDX7 TYR 97 ENGINEERED MUTATION SEQADV 5DE2 LEU B 303 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 GLU B 304 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS B 305 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS B 306 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS B 307 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS B 308 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS B 309 UNP Q8TDX7 EXPRESSION TAG SEQADV 5DE2 HIS B 310 UNP Q8TDX7 EXPRESSION TAG SEQRES 1 A 310 MET ASP GLU GLN SER GLN GLY MET GLN GLY PRO PRO VAL SEQRES 2 A 310 PRO GLN PHE GLN PRO GLN LYS ALA LEU ARG PRO ASP MET SEQRES 3 A 310 GLY TYR ASN THR LEU ALA ASN PHE ARG ILE GLU LYS LYS SEQRES 4 A 310 ILE GLY ARG GLY GLN PHE SER GLU VAL TYR ARG ALA ALA SEQRES 5 A 310 CYS LEU LEU ASP GLY VAL PRO VAL ALA LEU LYS LYS VAL SEQRES 6 A 310 GLN ILE PHE ASP LEU MET ASP ALA LYS ALA ARG ALA ASP SEQRES 7 A 310 CYS ILE LYS GLU ILE ASP LEU LEU LYS GLN LEU ASN HIS SEQRES 8 A 310 PRO ASN VAL ILE LYS PHE TYR ALA SER PHE ILE GLU ASP SEQRES 9 A 310 ASN GLU LEU ASN ILE VAL LEU GLU LEU ALA ASP ALA GLY SEQRES 10 A 310 ASP LEU SER ARG MET ILE LYS HIS PHE LYS LYS GLN LYS SEQRES 11 A 310 ARG LEU ILE PRO GLU ARG THR VAL TRP LYS TYR PHE VAL SEQRES 12 A 310 GLN LEU CYS SER ALA LEU GLU HIS MET HIS SER ARG ARG SEQRES 13 A 310 VAL MET HIS ARG ASP ILE LYS PRO ALA ASN VAL PHE ILE SEQRES 14 A 310 THR ALA THR GLY VAL VAL LYS LEU GLY ASP LEU GLY LEU SEQRES 15 A 310 GLY ARG PHE PHE SER SER LYS THR THR ALA ALA HIS SER SEQRES 16 A 310 LEU VAL GLY THR PRO TYR TYR MET SER PRO GLU ARG ILE SEQRES 17 A 310 HIS GLU ASN GLY TYR ASN PHE LYS SER ASP ILE TRP SER SEQRES 18 A 310 LEU GLY CYS LEU LEU TYR GLU MET ALA ALA LEU GLN SER SEQRES 19 A 310 PRO PHE TYR GLY ASP LYS MET ASN LEU TYR SER LEU CYS SEQRES 20 A 310 LYS LYS ILE GLU GLN CYS ASP TYR PRO PRO LEU PRO SER SEQRES 21 A 310 ASP HIS TYR SER GLU GLU LEU ARG GLN LEU VAL ASN MET SEQRES 22 A 310 CYS ILE ASN PRO ASP PRO GLU LYS ARG PRO ASP VAL THR SEQRES 23 A 310 TYR VAL TYR ASP VAL ALA LYS ARG MET HIS ALA CYS THR SEQRES 24 A 310 ALA SER SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 310 MET ASP GLU GLN SER GLN GLY MET GLN GLY PRO PRO VAL SEQRES 2 B 310 PRO GLN PHE GLN PRO GLN LYS ALA LEU ARG PRO ASP MET SEQRES 3 B 310 GLY TYR ASN THR LEU ALA ASN PHE ARG ILE GLU LYS LYS SEQRES 4 B 310 ILE GLY ARG GLY GLN PHE SER GLU VAL TYR ARG ALA ALA SEQRES 5 B 310 CYS LEU LEU ASP GLY VAL PRO VAL ALA LEU LYS LYS VAL SEQRES 6 B 310 GLN ILE PHE ASP LEU MET ASP ALA LYS ALA ARG ALA ASP SEQRES 7 B 310 CYS ILE LYS GLU ILE ASP LEU LEU LYS GLN LEU ASN HIS SEQRES 8 B 310 PRO ASN VAL ILE LYS PHE TYR ALA SER PHE ILE GLU ASP SEQRES 9 B 310 ASN GLU LEU ASN ILE VAL LEU GLU LEU ALA ASP ALA GLY SEQRES 10 B 310 ASP LEU SER ARG MET ILE LYS HIS PHE LYS LYS GLN LYS SEQRES 11 B 310 ARG LEU ILE PRO GLU ARG THR VAL TRP LYS TYR PHE VAL SEQRES 12 B 310 GLN LEU CYS SER ALA LEU GLU HIS MET HIS SER ARG ARG SEQRES 13 B 310 VAL MET HIS ARG ASP ILE LYS PRO ALA ASN VAL PHE ILE SEQRES 14 B 310 THR ALA THR GLY VAL VAL LYS LEU GLY ASP LEU GLY LEU SEQRES 15 B 310 GLY ARG PHE PHE SER SER LYS THR THR ALA ALA HIS SER SEQRES 16 B 310 LEU VAL GLY THR PRO TYR TYR MET SER PRO GLU ARG ILE SEQRES 17 B 310 HIS GLU ASN GLY TYR ASN PHE LYS SER ASP ILE TRP SER SEQRES 18 B 310 LEU GLY CYS LEU LEU TYR GLU MET ALA ALA LEU GLN SER SEQRES 19 B 310 PRO PHE TYR GLY ASP LYS MET ASN LEU TYR SER LEU CYS SEQRES 20 B 310 LYS LYS ILE GLU GLN CYS ASP TYR PRO PRO LEU PRO SER SEQRES 21 B 310 ASP HIS TYR SER GLU GLU LEU ARG GLN LEU VAL ASN MET SEQRES 22 B 310 CYS ILE ASN PRO ASP PRO GLU LYS ARG PRO ASP VAL THR SEQRES 23 B 310 TYR VAL TYR ASP VAL ALA LYS ARG MET HIS ALA CYS THR SEQRES 24 B 310 ALA SER SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 19 GLY TRP LEU ARG LYS GLU LEU GLU ASN ALA GLU PHE ILE SEQRES 2 C 19 PRO MET PRO ASP SER PRO SEQRES 1 D 19 GLY TRP LEU ARG LYS GLU LEU GLU ASN ALA GLU PHE ILE SEQRES 2 D 19 PRO MET PRO ASP SER PRO FORMUL 5 HOH *10(H2 O) HELIX 1 AA1 THR A 30 ALA A 32 5 3 HELIX 2 AA2 ASP A 72 LYS A 87 1 16 HELIX 3 AA3 ASP A 118 GLN A 129 1 12 HELIX 4 AA4 PRO A 134 ARG A 155 1 22 HELIX 5 AA5 LYS A 163 ALA A 165 5 3 HELIX 6 AA6 SER A 204 HIS A 209 1 6 HELIX 7 AA7 ASN A 214 LEU A 232 1 19 HELIX 8 AA8 ASN A 242 CYS A 253 1 12 HELIX 9 AA9 SER A 264 ILE A 275 1 12 HELIX 10 AB1 ASP A 278 ARG A 282 5 5 HELIX 11 AB2 ASP A 284 ALA A 300 1 17 HELIX 12 AB3 THR B 30 ALA B 32 5 3 HELIX 13 AB4 ASP B 72 LEU B 86 1 15 HELIX 14 AB5 LEU B 119 LYS B 128 1 10 HELIX 15 AB6 PRO B 134 ARG B 155 1 22 HELIX 16 AB7 LYS B 163 ALA B 165 5 3 HELIX 17 AB8 SER B 204 HIS B 209 1 6 HELIX 18 AB9 LYS B 216 LEU B 232 1 17 HELIX 19 AC1 ASN B 242 CYS B 253 1 12 HELIX 20 AC2 SER B 264 ILE B 275 1 12 HELIX 21 AC3 ASP B 278 ARG B 282 5 5 HELIX 22 AC4 ASP B 284 CYS B 298 1 15 HELIX 23 AC5 TRP C 811 ASN C 818 1 8 HELIX 24 AC6 TRP D 811 LEU D 816 1 6 SHEET 1 AA1 5 PHE A 34 ARG A 42 0 SHEET 2 AA1 5 SER A 46 CYS A 53 -1 O ARG A 50 N LYS A 38 SHEET 3 AA1 5 PRO A 59 VAL A 65 -1 O LEU A 62 N TYR A 49 SHEET 4 AA1 5 GLU A 106 LEU A 111 -1 O LEU A 111 N ALA A 61 SHEET 5 AA1 5 PHE A 97 GLU A 103 -1 N TYR A 98 O VAL A 110 SHEET 1 AA2 2 VAL A 167 ILE A 169 0 SHEET 2 AA2 2 VAL A 175 LEU A 177 -1 O LYS A 176 N PHE A 168 SHEET 1 AA3 5 PHE B 34 ARG B 42 0 SHEET 2 AA3 5 SER B 46 CYS B 53 -1 O ARG B 50 N GLU B 37 SHEET 3 AA3 5 PRO B 59 VAL B 65 -1 O LYS B 64 N GLU B 47 SHEET 4 AA3 5 LEU B 107 GLU B 112 -1 O LEU B 107 N VAL B 65 SHEET 5 AA3 5 PHE B 97 ILE B 102 -1 N PHE B 101 O ASN B 108 SHEET 1 AA4 3 GLY B 117 ASP B 118 0 SHEET 2 AA4 3 VAL B 167 ILE B 169 -1 O ILE B 169 N GLY B 117 SHEET 3 AA4 3 VAL B 175 LEU B 177 -1 O LYS B 176 N PHE B 168 CRYST1 88.120 88.120 155.610 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011348 0.006552 0.000000 0.00000 SCALE2 0.000000 0.013104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006426 0.00000