data_5DEB # _entry.id 5DEB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DEB pdb_00005deb 10.2210/pdb5deb/pdb WWPDB D_1000213070 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5CGV unspecified PDB . 5CCY unspecified PDB . 5CL0 unspecified PDB . 5D2O unspecified PDB . 5D42 unspecified PDB . 5D4G unspecified PDB . 5D9J unspecified PDB . 5CZN unspecified PDB . 5DBU unspecified PDB . 5DBS unspecified PDB . 5DES unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DEB _pdbx_database_status.recvd_initial_deposition_date 2015-08-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kumar, G.' 1 'White, S.W.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 113 _citation.language ? _citation.page_first 3669 _citation.page_last 3674 _citation.title 'Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1519772113 _citation.pdbx_database_id_PubMed 26976575 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Song, M.S.' 1 ? primary 'Kumar, G.' 2 ? primary 'Shadrick, W.R.' 3 ? primary 'Zhou, W.' 4 ? primary 'Jeevan, T.' 5 ? primary 'Li, Z.' 6 ? primary 'Slavish, P.J.' 7 ? primary 'Fabrizio, T.P.' 8 ? primary 'Yoon, S.W.' 9 ? primary 'Webb, T.R.' 10 ? primary 'Webby, R.J.' 11 ? primary 'White, S.W.' 12 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5DEB _cell.details ? _cell.formula_units_Z ? _cell.length_a 90.057 _cell.length_a_esd ? _cell.length_b 90.057 _cell.length_b_esd ? _cell.length_c 134.337 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DEB _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Polymerase acidic protein' 23134.316 1 3.1.-.- E119D 'endonuclease domain (UNP residues 1-50, 73-196 connected by GGS linker)' ? 2 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 3 non-polymer syn "URIDINE-5'-MONOPHOSPHATE" 324.181 1 ? ? ? ? 4 water nat water 18.015 23 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PA endonuclease' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDGGSKHRFEII EGRDRIMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFIDIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKA DYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSER ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDGGSKHRFEII EGRDRIMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFIDIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKA DYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSER ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 GLU n 1 23 ASP n 1 24 PHE n 1 25 VAL n 1 26 ARG n 1 27 GLN n 1 28 CYS n 1 29 PHE n 1 30 ASN n 1 31 PRO n 1 32 MET n 1 33 ILE n 1 34 VAL n 1 35 GLU n 1 36 LEU n 1 37 ALA n 1 38 GLU n 1 39 LYS n 1 40 ALA n 1 41 MET n 1 42 LYS n 1 43 GLU n 1 44 TYR n 1 45 GLY n 1 46 GLU n 1 47 ASP n 1 48 PRO n 1 49 LYS n 1 50 ILE n 1 51 GLU n 1 52 THR n 1 53 ASN n 1 54 LYS n 1 55 PHE n 1 56 ALA n 1 57 ALA n 1 58 ILE n 1 59 CYS n 1 60 THR n 1 61 HIS n 1 62 LEU n 1 63 GLU n 1 64 VAL n 1 65 CYS n 1 66 PHE n 1 67 MET n 1 68 TYR n 1 69 SER n 1 70 ASP n 1 71 GLY n 1 72 GLY n 1 73 SER n 1 74 LYS n 1 75 HIS n 1 76 ARG n 1 77 PHE n 1 78 GLU n 1 79 ILE n 1 80 ILE n 1 81 GLU n 1 82 GLY n 1 83 ARG n 1 84 ASP n 1 85 ARG n 1 86 ILE n 1 87 MET n 1 88 ALA n 1 89 TRP n 1 90 THR n 1 91 VAL n 1 92 VAL n 1 93 ASN n 1 94 SER n 1 95 ILE n 1 96 CYS n 1 97 ASN n 1 98 THR n 1 99 THR n 1 100 GLY n 1 101 VAL n 1 102 GLU n 1 103 LYS n 1 104 PRO n 1 105 LYS n 1 106 PHE n 1 107 LEU n 1 108 PRO n 1 109 ASP n 1 110 LEU n 1 111 TYR n 1 112 ASP n 1 113 TYR n 1 114 LYS n 1 115 GLU n 1 116 ASN n 1 117 ARG n 1 118 PHE n 1 119 ILE n 1 120 ASP n 1 121 ILE n 1 122 GLY n 1 123 VAL n 1 124 THR n 1 125 ARG n 1 126 ARG n 1 127 GLU n 1 128 VAL n 1 129 HIS n 1 130 ILE n 1 131 TYR n 1 132 TYR n 1 133 LEU n 1 134 GLU n 1 135 LYS n 1 136 ALA n 1 137 ASN n 1 138 LYS n 1 139 ILE n 1 140 LYS n 1 141 SER n 1 142 GLU n 1 143 LYS n 1 144 THR n 1 145 HIS n 1 146 ILE n 1 147 HIS n 1 148 ILE n 1 149 PHE n 1 150 SER n 1 151 PHE n 1 152 THR n 1 153 GLY n 1 154 GLU n 1 155 GLU n 1 156 MET n 1 157 ALA n 1 158 THR n 1 159 LYS n 1 160 ALA n 1 161 ASP n 1 162 TYR n 1 163 THR n 1 164 LEU n 1 165 ASP n 1 166 GLU n 1 167 GLU n 1 168 SER n 1 169 ARG n 1 170 ALA n 1 171 ARG n 1 172 ILE n 1 173 LYS n 1 174 THR n 1 175 ARG n 1 176 LEU n 1 177 PHE n 1 178 THR n 1 179 ILE n 1 180 ARG n 1 181 GLN n 1 182 GLU n 1 183 MET n 1 184 ALA n 1 185 SER n 1 186 ARG n 1 187 SER n 1 188 LEU n 1 189 TRP n 1 190 ASP n 1 191 SER n 1 192 PHE n 1 193 ARG n 1 194 GLN n 1 195 SER n 1 196 GLU n 1 197 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 70 ? ? PA ? 'swl A/California/04/2009 H1N1' ? ? ? ? 'Influenza A virus' 641501 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET28a ? ? 1 2 sample 'Biological sequence' 71 197 ? ? PA ? 'swl A/California/04/2009 H1N1' ? ? ? ? 'Influenza A virus' 641501 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET52b ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP C3W5S0_I09A0 C3W5S0 ? 1 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 1 2 UNP C3W5S0_I09A0 C3W5S0 ? 1 ;KHRFEIIEGRDRIMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTG EEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSER ; 73 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5DEB A 21 ? 70 ? C3W5S0 1 ? 50 ? 1 50 2 2 5DEB A 74 ? 197 ? C3W5S0 73 ? 196 ? 54 177 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5DEB MET A 1 ? UNP C3W5S0 ? ? 'expression tag' -19 1 1 5DEB GLY A 2 ? UNP C3W5S0 ? ? 'expression tag' -18 2 1 5DEB SER A 3 ? UNP C3W5S0 ? ? 'expression tag' -17 3 1 5DEB SER A 4 ? UNP C3W5S0 ? ? 'expression tag' -16 4 1 5DEB HIS A 5 ? UNP C3W5S0 ? ? 'expression tag' -15 5 1 5DEB HIS A 6 ? UNP C3W5S0 ? ? 'expression tag' -14 6 1 5DEB HIS A 7 ? UNP C3W5S0 ? ? 'expression tag' -13 7 1 5DEB HIS A 8 ? UNP C3W5S0 ? ? 'expression tag' -12 8 1 5DEB HIS A 9 ? UNP C3W5S0 ? ? 'expression tag' -11 9 1 5DEB HIS A 10 ? UNP C3W5S0 ? ? 'expression tag' -10 10 1 5DEB SER A 11 ? UNP C3W5S0 ? ? 'expression tag' -9 11 1 5DEB SER A 12 ? UNP C3W5S0 ? ? 'expression tag' -8 12 1 5DEB GLY A 13 ? UNP C3W5S0 ? ? 'expression tag' -7 13 1 5DEB LEU A 14 ? UNP C3W5S0 ? ? 'expression tag' -6 14 1 5DEB VAL A 15 ? UNP C3W5S0 ? ? 'expression tag' -5 15 1 5DEB PRO A 16 ? UNP C3W5S0 ? ? 'expression tag' -4 16 1 5DEB ARG A 17 ? UNP C3W5S0 ? ? 'expression tag' -3 17 1 5DEB GLY A 18 ? UNP C3W5S0 ? ? 'expression tag' -2 18 1 5DEB SER A 19 ? UNP C3W5S0 ? ? 'expression tag' -1 19 1 5DEB HIS A 20 ? UNP C3W5S0 ? ? 'expression tag' 0 20 1 5DEB GLY A 71 ? UNP C3W5S0 ? ? linker 51 21 1 5DEB GLY A 72 ? UNP C3W5S0 ? ? linker 52 22 1 5DEB SER A 73 ? UNP C3W5S0 ? ? linker 53 23 2 5DEB ASP A 120 ? UNP C3W5S0 GLU 119 'engineered mutation' 100 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U5P non-polymer . "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DEB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.94 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES, pH 7.5, 1.0 M ammonium sulfate, 2% w/v PEG400, 50 mM magnesium chloride, 50 mM manganese chloride, 200 mM rUMP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-10-26 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00522 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00522 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DEB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.07 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17236 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.9 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 36.82 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.07 _reflns_shell.d_res_low 2.14 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.9700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.9700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -1.9400 _refine.B_iso_max 142.210 _refine.B_iso_mean 68.5850 _refine.B_iso_min 37.990 _refine.correlation_coeff_Fo_to_Fc 0.9590 _refine.correlation_coeff_Fo_to_Fc_free 0.9330 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DEB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1400 _refine.ls_d_res_low 46.2100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14764 _refine.ls_number_reflns_R_free 835 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7400 _refine.ls_percent_reflns_R_free 5.4000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2083 _refine.ls_R_factor_R_free 0.2487 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2060 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 5CZN' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1830 _refine.pdbx_overall_ESU_R_Free 0.1710 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 14.0000 _refine.overall_SU_ML 0.1720 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.1400 _refine_hist.d_res_low 46.2100 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 1474 _refine_hist.pdbx_number_residues_total 179 _refine_hist.pdbx_B_iso_mean_ligand 104.41 _refine_hist.pdbx_B_iso_mean_solvent 53.21 _refine_hist.pdbx_number_atoms_protein 1428 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 0.019 1481 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1338 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.741 1.950 1999 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.045 3.000 3074 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.734 5.000 178 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.975 23.056 72 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.418 15.000 252 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.453 15.000 12 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.100 0.200 215 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1660 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 360 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 2.068 3.390 715 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.069 3.388 714 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.267 5.076 892 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.1400 _refine_ls_shell.d_res_low 2.1950 _refine_ls_shell.number_reflns_all 1139 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.number_reflns_R_work 1064 _refine_ls_shell.percent_reflns_obs 99.7400 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3130 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2520 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5DEB _struct.title '2009 H1N1 PA endonuclease mutant E119D in complex with rUMP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DEB _struct_keywords.text 'influenza, resistance, endonuclease inhibitor, viral protein, HYDROLASE-HYDROLASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 19 ? PHE A 29 ? SER A -1 PHE A 9 1 ? 11 HELX_P HELX_P2 AA2 ASN A 30 ? GLY A 45 ? ASN A 10 GLY A 25 1 ? 16 HELX_P HELX_P3 AA3 GLU A 51 ? ASP A 70 ? GLU A 31 ASP A 50 1 ? 20 HELX_P HELX_P4 AA4 ASP A 84 ? GLY A 100 ? ASP A 64 GLY A 80 1 ? 17 HELX_P HELX_P5 AA5 GLU A 127 ? LYS A 140 ? GLU A 107 LYS A 120 1 ? 14 HELX_P HELX_P6 AA6 LYS A 159 ? ASP A 161 ? LYS A 139 ASP A 141 5 ? 3 HELX_P HELX_P7 AA7 ASP A 165 ? SER A 185 ? ASP A 145 SER A 165 1 ? 21 HELX_P HELX_P8 AA8 LEU A 188 ? GLU A 196 ? LEU A 168 GLU A 176 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 61 NE2 ? ? ? 1_555 B MN . MN ? ? A HIS 41 A MN 201 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc2 metalc ? ? A ASP 109 OD2 ? ? ? 1_555 B MN . MN ? ? A ASP 89 A MN 201 1_555 ? ? ? ? ? ? ? 2.161 ? ? metalc3 metalc ? ? A ASP 109 OD1 ? ? ? 1_555 C MN . MN ? ? A ASP 89 A MN 202 1_555 ? ? ? ? ? ? ? 2.270 ? ? metalc4 metalc ? ? A ASP 120 OD1 ? ? ? 1_555 B MN . MN ? ? A ASP 100 A MN 201 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc5 metalc ? ? A ILE 121 O ? ? ? 1_555 B MN . MN ? ? A ILE 101 A MN 201 1_555 ? ? ? ? ? ? ? 2.070 ? ? metalc6 metalc ? ? B MN . MN ? ? ? 1_555 D U5P . O2P ? ? A MN 201 A U5P 203 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc7 metalc ? ? B MN . MN ? ? ? 1_555 D U5P . O1P ? ? A MN 201 A U5P 203 1_555 ? ? ? ? ? ? ? 2.245 ? ? metalc8 metalc ? ? C MN . MN ? ? ? 1_555 D U5P . O1P ? ? A MN 202 A U5P 203 1_555 ? ? ? ? ? ? ? 1.949 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 77 ? ILE A 79 ? PHE A 57 ILE A 59 AA1 2 LEU A 110 ? ASP A 112 ? LEU A 90 ASP A 92 AA1 3 ARG A 117 ? THR A 124 ? ARG A 97 THR A 104 AA1 4 HIS A 145 ? SER A 150 ? HIS A 125 SER A 130 AA1 5 GLU A 155 ? ALA A 157 ? GLU A 135 ALA A 137 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 78 ? N GLU A 58 O TYR A 111 ? O TYR A 91 AA1 2 3 N ASP A 112 ? N ASP A 92 O ARG A 117 ? O ARG A 97 AA1 3 4 N PHE A 118 ? N PHE A 98 O HIS A 145 ? O HIS A 125 AA1 4 5 N ILE A 148 ? N ILE A 128 O MET A 156 ? O MET A 136 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 201 ? 6 'binding site for residue MN A 201' AC2 Software A MN 202 ? 4 'binding site for residue MN A 202' AC3 Software A U5P 203 ? 11 'binding site for residue U5P A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 61 ? HIS A 41 . ? 1_555 ? 2 AC1 6 ASP A 109 ? ASP A 89 . ? 1_555 ? 3 AC1 6 ASP A 120 ? ASP A 100 . ? 1_555 ? 4 AC1 6 ILE A 121 ? ILE A 101 . ? 1_555 ? 5 AC1 6 MN C . ? MN A 202 . ? 1_555 ? 6 AC1 6 U5P D . ? U5P A 203 . ? 1_555 ? 7 AC2 4 HIS A 61 ? HIS A 41 . ? 1_555 ? 8 AC2 4 ASP A 109 ? ASP A 89 . ? 1_555 ? 9 AC2 4 MN B . ? MN A 201 . ? 1_555 ? 10 AC2 4 U5P D . ? U5P A 203 . ? 1_555 ? 11 AC3 11 TYR A 44 ? TYR A 24 . ? 1_555 ? 12 AC3 11 LYS A 54 ? LYS A 34 . ? 1_555 ? 13 AC3 11 HIS A 61 ? HIS A 41 . ? 1_555 ? 14 AC3 11 ASP A 109 ? ASP A 89 . ? 1_555 ? 15 AC3 11 ASP A 120 ? ASP A 100 . ? 1_555 ? 16 AC3 11 ILE A 121 ? ILE A 101 . ? 1_555 ? 17 AC3 11 TYR A 131 ? TYR A 111 . ? 1_555 ? 18 AC3 11 LYS A 135 ? LYS A 115 . ? 1_555 ? 19 AC3 11 MN B . ? MN A 201 . ? 1_555 ? 20 AC3 11 MN C . ? MN A 202 . ? 1_555 ? 21 AC3 11 HOH E . ? HOH A 307 . ? 1_555 ? # _atom_sites.entry_id 5DEB _atom_sites.fract_transf_matrix[1][1] 0.011104 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011104 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007444 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 -2 GLY GLY A . n A 1 19 SER 19 -1 -1 SER SER A . n A 1 20 HIS 20 0 0 HIS HIS A . n A 1 21 MET 21 1 1 MET MET A . n A 1 22 GLU 22 2 2 GLU GLU A . n A 1 23 ASP 23 3 3 ASP ASP A . n A 1 24 PHE 24 4 4 PHE PHE A . n A 1 25 VAL 25 5 5 VAL VAL A . n A 1 26 ARG 26 6 6 ARG ARG A . n A 1 27 GLN 27 7 7 GLN GLN A . n A 1 28 CYS 28 8 8 CYS CYS A . n A 1 29 PHE 29 9 9 PHE PHE A . n A 1 30 ASN 30 10 10 ASN ASN A . n A 1 31 PRO 31 11 11 PRO PRO A . n A 1 32 MET 32 12 12 MET MET A . n A 1 33 ILE 33 13 13 ILE ILE A . n A 1 34 VAL 34 14 14 VAL VAL A . n A 1 35 GLU 35 15 15 GLU GLU A . n A 1 36 LEU 36 16 16 LEU LEU A . n A 1 37 ALA 37 17 17 ALA ALA A . n A 1 38 GLU 38 18 18 GLU GLU A . n A 1 39 LYS 39 19 19 LYS LYS A . n A 1 40 ALA 40 20 20 ALA ALA A . n A 1 41 MET 41 21 21 MET MET A . n A 1 42 LYS 42 22 22 LYS LYS A . n A 1 43 GLU 43 23 23 GLU GLU A . n A 1 44 TYR 44 24 24 TYR TYR A . n A 1 45 GLY 45 25 25 GLY GLY A . n A 1 46 GLU 46 26 26 GLU GLU A . n A 1 47 ASP 47 27 27 ASP ASP A . n A 1 48 PRO 48 28 28 PRO PRO A . n A 1 49 LYS 49 29 29 LYS LYS A . n A 1 50 ILE 50 30 30 ILE ILE A . n A 1 51 GLU 51 31 31 GLU GLU A . n A 1 52 THR 52 32 32 THR THR A . n A 1 53 ASN 53 33 33 ASN ASN A . n A 1 54 LYS 54 34 34 LYS LYS A . n A 1 55 PHE 55 35 35 PHE PHE A . n A 1 56 ALA 56 36 36 ALA ALA A . n A 1 57 ALA 57 37 37 ALA ALA A . n A 1 58 ILE 58 38 38 ILE ILE A . n A 1 59 CYS 59 39 39 CYS CYS A . n A 1 60 THR 60 40 40 THR THR A . n A 1 61 HIS 61 41 41 HIS HIS A . n A 1 62 LEU 62 42 42 LEU LEU A . n A 1 63 GLU 63 43 43 GLU GLU A . n A 1 64 VAL 64 44 44 VAL VAL A . n A 1 65 CYS 65 45 45 CYS CYS A . n A 1 66 PHE 66 46 46 PHE PHE A . n A 1 67 MET 67 47 47 MET MET A . n A 1 68 TYR 68 48 48 TYR TYR A . n A 1 69 SER 69 49 49 SER SER A . n A 1 70 ASP 70 50 50 ASP ASP A . n A 1 71 GLY 71 51 51 GLY GLY A . n A 1 72 GLY 72 52 52 GLY GLY A . n A 1 73 SER 73 53 53 SER SER A . n A 1 74 LYS 74 54 54 LYS LYS A . n A 1 75 HIS 75 55 55 HIS HIS A . n A 1 76 ARG 76 56 56 ARG ARG A . n A 1 77 PHE 77 57 57 PHE PHE A . n A 1 78 GLU 78 58 58 GLU GLU A . n A 1 79 ILE 79 59 59 ILE ILE A . n A 1 80 ILE 80 60 60 ILE ILE A . n A 1 81 GLU 81 61 61 GLU GLU A . n A 1 82 GLY 82 62 62 GLY GLY A . n A 1 83 ARG 83 63 63 ARG ARG A . n A 1 84 ASP 84 64 64 ASP ASP A . n A 1 85 ARG 85 65 65 ARG ARG A . n A 1 86 ILE 86 66 66 ILE ILE A . n A 1 87 MET 87 67 67 MET MET A . n A 1 88 ALA 88 68 68 ALA ALA A . n A 1 89 TRP 89 69 69 TRP TRP A . n A 1 90 THR 90 70 70 THR THR A . n A 1 91 VAL 91 71 71 VAL VAL A . n A 1 92 VAL 92 72 72 VAL VAL A . n A 1 93 ASN 93 73 73 ASN ASN A . n A 1 94 SER 94 74 74 SER SER A . n A 1 95 ILE 95 75 75 ILE ILE A . n A 1 96 CYS 96 76 76 CYS CYS A . n A 1 97 ASN 97 77 77 ASN ASN A . n A 1 98 THR 98 78 78 THR THR A . n A 1 99 THR 99 79 79 THR THR A . n A 1 100 GLY 100 80 80 GLY GLY A . n A 1 101 VAL 101 81 81 VAL VAL A . n A 1 102 GLU 102 82 82 GLU GLU A . n A 1 103 LYS 103 83 83 LYS LYS A . n A 1 104 PRO 104 84 84 PRO PRO A . n A 1 105 LYS 105 85 85 LYS LYS A . n A 1 106 PHE 106 86 86 PHE PHE A . n A 1 107 LEU 107 87 87 LEU LEU A . n A 1 108 PRO 108 88 88 PRO PRO A . n A 1 109 ASP 109 89 89 ASP ASP A . n A 1 110 LEU 110 90 90 LEU LEU A . n A 1 111 TYR 111 91 91 TYR TYR A . n A 1 112 ASP 112 92 92 ASP ASP A . n A 1 113 TYR 113 93 93 TYR TYR A . n A 1 114 LYS 114 94 94 LYS LYS A . n A 1 115 GLU 115 95 95 GLU GLU A . n A 1 116 ASN 116 96 96 ASN ASN A . n A 1 117 ARG 117 97 97 ARG ARG A . n A 1 118 PHE 118 98 98 PHE PHE A . n A 1 119 ILE 119 99 99 ILE ILE A . n A 1 120 ASP 120 100 100 ASP ASP A . n A 1 121 ILE 121 101 101 ILE ILE A . n A 1 122 GLY 122 102 102 GLY GLY A . n A 1 123 VAL 123 103 103 VAL VAL A . n A 1 124 THR 124 104 104 THR THR A . n A 1 125 ARG 125 105 105 ARG ARG A . n A 1 126 ARG 126 106 106 ARG ARG A . n A 1 127 GLU 127 107 107 GLU GLU A . n A 1 128 VAL 128 108 108 VAL VAL A . n A 1 129 HIS 129 109 109 HIS HIS A . n A 1 130 ILE 130 110 110 ILE ILE A . n A 1 131 TYR 131 111 111 TYR TYR A . n A 1 132 TYR 132 112 112 TYR TYR A . n A 1 133 LEU 133 113 113 LEU LEU A . n A 1 134 GLU 134 114 114 GLU GLU A . n A 1 135 LYS 135 115 115 LYS LYS A . n A 1 136 ALA 136 116 116 ALA ALA A . n A 1 137 ASN 137 117 117 ASN ASN A . n A 1 138 LYS 138 118 118 LYS LYS A . n A 1 139 ILE 139 119 119 ILE ILE A . n A 1 140 LYS 140 120 120 LYS LYS A . n A 1 141 SER 141 121 121 SER SER A . n A 1 142 GLU 142 122 122 GLU GLU A . n A 1 143 LYS 143 123 123 LYS LYS A . n A 1 144 THR 144 124 124 THR THR A . n A 1 145 HIS 145 125 125 HIS HIS A . n A 1 146 ILE 146 126 126 ILE ILE A . n A 1 147 HIS 147 127 127 HIS HIS A . n A 1 148 ILE 148 128 128 ILE ILE A . n A 1 149 PHE 149 129 129 PHE PHE A . n A 1 150 SER 150 130 130 SER SER A . n A 1 151 PHE 151 131 131 PHE PHE A . n A 1 152 THR 152 132 132 THR THR A . n A 1 153 GLY 153 133 133 GLY GLY A . n A 1 154 GLU 154 134 134 GLU GLU A . n A 1 155 GLU 155 135 135 GLU GLU A . n A 1 156 MET 156 136 136 MET MET A . n A 1 157 ALA 157 137 137 ALA ALA A . n A 1 158 THR 158 138 138 THR THR A . n A 1 159 LYS 159 139 139 LYS LYS A . n A 1 160 ALA 160 140 140 ALA ALA A . n A 1 161 ASP 161 141 141 ASP ASP A . n A 1 162 TYR 162 142 142 TYR TYR A . n A 1 163 THR 163 143 143 THR THR A . n A 1 164 LEU 164 144 144 LEU LEU A . n A 1 165 ASP 165 145 145 ASP ASP A . n A 1 166 GLU 166 146 146 GLU GLU A . n A 1 167 GLU 167 147 147 GLU GLU A . n A 1 168 SER 168 148 148 SER SER A . n A 1 169 ARG 169 149 149 ARG ARG A . n A 1 170 ALA 170 150 150 ALA ALA A . n A 1 171 ARG 171 151 151 ARG ARG A . n A 1 172 ILE 172 152 152 ILE ILE A . n A 1 173 LYS 173 153 153 LYS LYS A . n A 1 174 THR 174 154 154 THR THR A . n A 1 175 ARG 175 155 155 ARG ARG A . n A 1 176 LEU 176 156 156 LEU LEU A . n A 1 177 PHE 177 157 157 PHE PHE A . n A 1 178 THR 178 158 158 THR THR A . n A 1 179 ILE 179 159 159 ILE ILE A . n A 1 180 ARG 180 160 160 ARG ARG A . n A 1 181 GLN 181 161 161 GLN GLN A . n A 1 182 GLU 182 162 162 GLU GLU A . n A 1 183 MET 183 163 163 MET MET A . n A 1 184 ALA 184 164 164 ALA ALA A . n A 1 185 SER 185 165 165 SER SER A . n A 1 186 ARG 186 166 166 ARG ARG A . n A 1 187 SER 187 167 167 SER SER A . n A 1 188 LEU 188 168 168 LEU LEU A . n A 1 189 TRP 189 169 169 TRP TRP A . n A 1 190 ASP 190 170 170 ASP ASP A . n A 1 191 SER 191 171 171 SER SER A . n A 1 192 PHE 192 172 172 PHE PHE A . n A 1 193 ARG 193 173 173 ARG ARG A . n A 1 194 GLN 194 174 174 GLN GLN A . n A 1 195 SER 195 175 175 SER SER A . n A 1 196 GLU 196 176 176 GLU GLU A . n A 1 197 ARG 197 177 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN 1 201 1 MN MN A . C 2 MN 1 202 2 MN MN A . D 3 U5P 1 203 1 U5P U5P A . E 4 HOH 1 301 15 HOH HOH A . E 4 HOH 2 302 18 HOH HOH A . E 4 HOH 3 303 7 HOH HOH A . E 4 HOH 4 304 8 HOH HOH A . E 4 HOH 5 305 21 HOH HOH A . E 4 HOH 6 306 5 HOH HOH A . E 4 HOH 7 307 10 HOH HOH A . E 4 HOH 8 308 16 HOH HOH A . E 4 HOH 9 309 6 HOH HOH A . E 4 HOH 10 310 17 HOH HOH A . E 4 HOH 11 311 4 HOH HOH A . E 4 HOH 12 312 20 HOH HOH A . E 4 HOH 13 313 14 HOH HOH A . E 4 HOH 14 314 13 HOH HOH A . E 4 HOH 15 315 19 HOH HOH A . E 4 HOH 16 316 1 HOH HOH A . E 4 HOH 17 317 12 HOH HOH A . E 4 HOH 18 318 22 HOH HOH A . E 4 HOH 19 319 11 HOH HOH A . E 4 HOH 20 320 3 HOH HOH A . E 4 HOH 21 321 2 HOH HOH A . E 4 HOH 22 322 9 HOH HOH A . E 4 HOH 23 323 23 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 820 ? 1 MORE -18 ? 1 'SSA (A^2)' 8970 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 61 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 OD2 ? A ASP 109 ? A ASP 89 ? 1_555 99.1 ? 2 NE2 ? A HIS 61 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 OD1 ? A ASP 120 ? A ASP 100 ? 1_555 165.8 ? 3 OD2 ? A ASP 109 ? A ASP 89 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 OD1 ? A ASP 120 ? A ASP 100 ? 1_555 84.5 ? 4 NE2 ? A HIS 61 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? A ILE 121 ? A ILE 101 ? 1_555 78.5 ? 5 OD2 ? A ASP 109 ? A ASP 89 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? A ILE 121 ? A ILE 101 ? 1_555 94.2 ? 6 OD1 ? A ASP 120 ? A ASP 100 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? A ILE 121 ? A ILE 101 ? 1_555 87.5 ? 7 NE2 ? A HIS 61 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O2P ? D U5P . ? A U5P 203 ? 1_555 84.8 ? 8 OD2 ? A ASP 109 ? A ASP 89 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O2P ? D U5P . ? A U5P 203 ? 1_555 173.0 ? 9 OD1 ? A ASP 120 ? A ASP 100 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O2P ? D U5P . ? A U5P 203 ? 1_555 93.2 ? 10 O ? A ILE 121 ? A ILE 101 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O2P ? D U5P . ? A U5P 203 ? 1_555 92.3 ? 11 NE2 ? A HIS 61 ? A HIS 41 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O1P ? D U5P . ? A U5P 203 ? 1_555 88.5 ? 12 OD2 ? A ASP 109 ? A ASP 89 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O1P ? D U5P . ? A U5P 203 ? 1_555 107.7 ? 13 OD1 ? A ASP 120 ? A ASP 100 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O1P ? D U5P . ? A U5P 203 ? 1_555 103.6 ? 14 O ? A ILE 121 ? A ILE 101 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O1P ? D U5P . ? A U5P 203 ? 1_555 156.1 ? 15 O2P ? D U5P . ? A U5P 203 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O1P ? D U5P . ? A U5P 203 ? 1_555 66.4 ? 16 OD1 ? A ASP 109 ? A ASP 89 ? 1_555 MN ? C MN . ? A MN 202 ? 1_555 O1P ? D U5P . ? A U5P 203 ? 1_555 103.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-16 2 'Structure model' 1 1 2016-03-30 3 'Structure model' 1 2 2016-04-13 4 'Structure model' 1 3 2017-09-13 5 'Structure model' 1 4 2019-12-11 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_audit_support 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' 7 6 'Structure model' '_struct_conn.pdbx_dist_value' 8 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 10 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 127.7138 111.1024 286.7179 0.5026 ? -0.1703 ? 0.3730 ? 0.3081 ? -0.0433 ? 0.3146 ? 3.5962 ? -0.3626 ? 1.4987 ? 0.4713 ? -0.4326 ? 1.3378 ? 0.0297 ? -0.2267 ? -0.2276 ? 0.1195 ? -0.2949 ? 0.0442 ? 0.4243 ? -0.0018 ? 0.2652 ? 2 'X-RAY DIFFRACTION' ? refined 131.2570 107.5087 287.6538 0.0506 ? 0.0323 ? -0.0374 ? 0.1209 ? 0.0216 ? 0.1533 ? 28.8772 ? 75.0790 ? 8.1678 ? 199.6850 ? 21.7390 ? 2.9333 ? 0.6023 ? -0.0290 ? -1.1370 ? 1.7359 ? -0.1753 ? -3.1859 ? 0.2611 ? -0.0939 ? -0.4270 ? 3 'X-RAY DIFFRACTION' ? refined 128.8866 104.1714 283.7750 0.2939 ? -0.1666 ? 0.0712 ? 0.2120 ? -0.0807 ? 0.4513 ? 1.0938 ? 5.3272 ? -6.1593 ? 26.2844 ? -30.1630 ? 34.7963 ? -0.1128 ? -0.1773 ? -0.2173 ? -0.2542 ? -1.0537 ? -1.1362 ? 0.4406 ? 1.1140 ? 1.1665 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A -2 ? ? A 176 ? ? 2 'X-RAY DIFFRACTION' 2 ? ? B 1 ? ? B 2 ? ? 3 'X-RAY DIFFRACTION' 3 ? ? E 1 ? ? E 1 ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? SERGUI ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0124 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 6 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 151 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 151 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 151 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.79 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.49 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 96 ? ? 39.42 62.34 2 1 ARG A 106 ? ? -129.69 -165.06 3 1 THR A 143 ? ? 73.22 -62.59 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLY _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 52 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 SER _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 53 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.45 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 15 ? CD ? A GLU 35 CD 2 1 Y 1 A GLU 15 ? OE1 ? A GLU 35 OE1 3 1 Y 1 A GLU 15 ? OE2 ? A GLU 35 OE2 4 1 Y 1 A ARG 65 ? CG ? A ARG 85 CG 5 1 Y 1 A ARG 65 ? CD ? A ARG 85 CD 6 1 Y 1 A ARG 65 ? NE ? A ARG 85 NE 7 1 Y 1 A ARG 65 ? CZ ? A ARG 85 CZ 8 1 Y 1 A ARG 65 ? NH1 ? A ARG 85 NH1 9 1 Y 1 A ARG 65 ? NH2 ? A ARG 85 NH2 10 1 Y 1 A GLU 82 ? CG ? A GLU 102 CG 11 1 Y 1 A GLU 82 ? CD ? A GLU 102 CD 12 1 Y 1 A GLU 82 ? OE1 ? A GLU 102 OE1 13 1 Y 1 A GLU 82 ? OE2 ? A GLU 102 OE2 14 1 Y 1 A LYS 85 ? CG ? A LYS 105 CG 15 1 Y 1 A LYS 85 ? CD ? A LYS 105 CD 16 1 Y 1 A LYS 85 ? CE ? A LYS 105 CE 17 1 Y 1 A LYS 85 ? NZ ? A LYS 105 NZ 18 1 Y 1 A VAL 108 ? CG1 ? A VAL 128 CG1 19 1 Y 1 A VAL 108 ? CG2 ? A VAL 128 CG2 20 1 Y 1 A LEU 113 ? CG ? A LEU 133 CG 21 1 Y 1 A LEU 113 ? CD1 ? A LEU 133 CD1 22 1 Y 1 A LEU 113 ? CD2 ? A LEU 133 CD2 23 1 Y 1 A LYS 118 ? CG ? A LYS 138 CG 24 1 Y 1 A LYS 118 ? CD ? A LYS 138 CD 25 1 Y 1 A LYS 118 ? CE ? A LYS 138 CE 26 1 Y 1 A LYS 118 ? NZ ? A LYS 138 NZ 27 1 Y 1 A ILE 119 ? CG1 ? A ILE 139 CG1 28 1 Y 1 A ILE 119 ? CG2 ? A ILE 139 CG2 29 1 Y 1 A ILE 119 ? CD1 ? A ILE 139 CD1 30 1 Y 1 A LYS 120 ? CG ? A LYS 140 CG 31 1 Y 1 A LYS 120 ? CD ? A LYS 140 CD 32 1 Y 1 A LYS 120 ? CE ? A LYS 140 CE 33 1 Y 1 A LYS 120 ? NZ ? A LYS 140 NZ 34 1 Y 1 A GLU 122 ? CG ? A GLU 142 CG 35 1 Y 1 A GLU 122 ? CD ? A GLU 142 CD 36 1 Y 1 A GLU 122 ? OE1 ? A GLU 142 OE1 37 1 Y 1 A GLU 122 ? OE2 ? A GLU 142 OE2 38 1 Y 1 A LYS 123 ? CG ? A LYS 143 CG 39 1 Y 1 A LYS 123 ? CD ? A LYS 143 CD 40 1 Y 1 A LYS 123 ? CE ? A LYS 143 CE 41 1 Y 1 A LYS 123 ? NZ ? A LYS 143 NZ 42 1 Y 1 A GLU 146 ? CG ? A GLU 166 CG 43 1 Y 1 A GLU 146 ? CD ? A GLU 166 CD 44 1 Y 1 A GLU 146 ? OE1 ? A GLU 166 OE1 45 1 Y 1 A GLU 146 ? OE2 ? A GLU 166 OE2 46 1 Y 1 A GLN 174 ? CG ? A GLN 194 CG 47 1 Y 1 A GLN 174 ? CD ? A GLN 194 CD 48 1 Y 1 A GLN 174 ? OE1 ? A GLN 194 OE1 49 1 Y 1 A GLN 174 ? NE2 ? A GLN 194 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A ARG 177 ? A ARG 197 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 MN MN MN N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 U5P N1 N N N 373 U5P C2 C N N 374 U5P N3 N N N 375 U5P C4 C N N 376 U5P C5 C N N 377 U5P C6 C N N 378 U5P O2 O N N 379 U5P O4 O N N 380 U5P "C1'" C N R 381 U5P "C2'" C N R 382 U5P "O2'" O N N 383 U5P "C3'" C N S 384 U5P "C4'" C N R 385 U5P "O3'" O N N 386 U5P "O4'" O N N 387 U5P "C5'" C N N 388 U5P "O5'" O N N 389 U5P P P N N 390 U5P O1P O N N 391 U5P O2P O N N 392 U5P O3P O N N 393 U5P HN3 H N N 394 U5P H5 H N N 395 U5P H6 H N N 396 U5P "H1'" H N N 397 U5P "H2'" H N N 398 U5P "HO2'" H N N 399 U5P "H3'" H N N 400 U5P "H4'" H N N 401 U5P "HO3'" H N N 402 U5P "H5'1" H N N 403 U5P "H5'2" H N N 404 U5P HOP2 H N N 405 U5P HOP3 H N N 406 VAL N N N N 407 VAL CA C N S 408 VAL C C N N 409 VAL O O N N 410 VAL CB C N N 411 VAL CG1 C N N 412 VAL CG2 C N N 413 VAL OXT O N N 414 VAL H H N N 415 VAL H2 H N N 416 VAL HA H N N 417 VAL HB H N N 418 VAL HG11 H N N 419 VAL HG12 H N N 420 VAL HG13 H N N 421 VAL HG21 H N N 422 VAL HG22 H N N 423 VAL HG23 H N N 424 VAL HXT H N N 425 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 U5P N1 C2 sing N N 358 U5P N1 C6 sing N N 359 U5P N1 "C1'" sing N N 360 U5P C2 N3 sing N N 361 U5P C2 O2 doub N N 362 U5P N3 C4 sing N N 363 U5P N3 HN3 sing N N 364 U5P C4 C5 sing N N 365 U5P C4 O4 doub N N 366 U5P C5 C6 doub N N 367 U5P C5 H5 sing N N 368 U5P C6 H6 sing N N 369 U5P "C1'" "C2'" sing N N 370 U5P "C1'" "O4'" sing N N 371 U5P "C1'" "H1'" sing N N 372 U5P "C2'" "O2'" sing N N 373 U5P "C2'" "C3'" sing N N 374 U5P "C2'" "H2'" sing N N 375 U5P "O2'" "HO2'" sing N N 376 U5P "C3'" "C4'" sing N N 377 U5P "C3'" "O3'" sing N N 378 U5P "C3'" "H3'" sing N N 379 U5P "C4'" "O4'" sing N N 380 U5P "C4'" "C5'" sing N N 381 U5P "C4'" "H4'" sing N N 382 U5P "O3'" "HO3'" sing N N 383 U5P "C5'" "O5'" sing N N 384 U5P "C5'" "H5'1" sing N N 385 U5P "C5'" "H5'2" sing N N 386 U5P "O5'" P sing N N 387 U5P P O1P doub N N 388 U5P P O2P sing N N 389 U5P P O3P sing N N 390 U5P O2P HOP2 sing N N 391 U5P O3P HOP3 sing N N 392 VAL N CA sing N N 393 VAL N H sing N N 394 VAL N H2 sing N N 395 VAL CA C sing N N 396 VAL CA CB sing N N 397 VAL CA HA sing N N 398 VAL C O doub N N 399 VAL C OXT sing N N 400 VAL CB CG1 sing N N 401 VAL CB CG2 sing N N 402 VAL CB HB sing N N 403 VAL CG1 HG11 sing N N 404 VAL CG1 HG12 sing N N 405 VAL CG1 HG13 sing N N 406 VAL CG2 HG21 sing N N 407 VAL CG2 HG22 sing N N 408 VAL CG2 HG23 sing N N 409 VAL OXT HXT sing N N 410 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R01AI098757 1 ;St. Jude Children's Research Hospital (ALSAC) ; 'United States' ? 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MANGANESE (II) ION' MN 3 "URIDINE-5'-MONOPHOSPHATE" U5P 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5CZN _pdbx_initial_refinement_model.details 'PDB entry 5CZN' #