HEADER TRANSCRIPTION 31-AUG-15 5DID TITLE CRYSTAL STRUCTURE OF THE ER-ALPHA LIGAND-BINDING DOMAIN IN COMPLEX TITLE 2 WITH A DIFLUORO-SUBSTITUTED A-CD RING ESTROGEN DERIVATIVE (1S,3AR,5S, TITLE 3 7AS)-5-(2,3-DIFLUORO-4-HYDROXYPHENYL)-7A-METHYLOCTAHYDRO-1H-INDEN-1- TITLE 4 OL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 5 GROUP A MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 10 CHAIN: C, D; COMPND 11 SYNONYM: NCOA-2,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 75,BHLHE75, COMPND 12 TRANSCRIPTIONAL INTERMEDIARY FACTOR 2,HTIF2; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, LIGAND BINDING, PROTEIN- KEYWDS 2 LIGAND COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.C.NWACHUKWU,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG,Z.LIAO, AUTHOR 2 V.CAVETT,J.NOWAK,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN,O.ELEMENTO, AUTHOR 3 J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES REVDAT 2 06-MAR-24 5DID 1 HEADER REMARK REVDAT 1 04-MAY-16 5DID 0 JRNL AUTH J.C.NWACHUKWU,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG, JRNL AUTH 2 Z.LIAO,J.NOWAK,N.J.WRIGHT,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN, JRNL AUTH 3 O.ELEMENTO,J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES JRNL TITL PREDICTIVE FEATURES OF LIGAND-SPECIFIC SIGNALING THROUGH THE JRNL TITL 2 ESTROGEN RECEPTOR. JRNL REF MOL.SYST.BIOL. V. 12 864 2016 JRNL REFN ESSN 1744-4292 JRNL PMID 27107013 JRNL DOI 10.15252/MSB.20156701 REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 3 NUMBER OF REFLECTIONS : 21068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4695 - 5.3932 0.99 1616 166 0.1685 0.2106 REMARK 3 2 5.3932 - 4.2817 1.00 1583 161 0.1564 0.1836 REMARK 3 3 4.2817 - 3.7407 0.99 1575 157 0.1497 0.2096 REMARK 3 4 3.7407 - 3.3988 0.99 1568 158 0.1696 0.2177 REMARK 3 5 3.3988 - 3.1553 0.98 1571 151 0.1930 0.2085 REMARK 3 6 3.1553 - 2.9693 0.97 1514 154 0.2031 0.2624 REMARK 3 7 2.9693 - 2.8206 0.95 1527 149 0.2017 0.2385 REMARK 3 8 2.8206 - 2.6978 0.94 1488 143 0.2203 0.2765 REMARK 3 9 2.6978 - 2.5940 0.91 1424 145 0.2228 0.2398 REMARK 3 10 2.5940 - 2.5045 0.87 1375 132 0.2265 0.3050 REMARK 3 11 2.5045 - 2.4262 0.80 1241 133 0.2373 0.3022 REMARK 3 12 2.4262 - 2.3568 0.70 1089 112 0.2350 0.2692 REMARK 3 13 2.3568 - 2.2948 0.57 916 79 0.2450 0.3488 REMARK 3 14 2.2948 - 2.2388 0.43 676 65 0.2365 0.3096 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4101 REMARK 3 ANGLE : 0.639 5555 REMARK 3 CHIRALITY : 0.023 662 REMARK 3 PLANARITY : 0.003 687 REMARK 3 DIHEDRAL : 13.983 1497 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0182 0.1900 31.8772 REMARK 3 T TENSOR REMARK 3 T11: 0.3362 T22: 0.4197 REMARK 3 T33: 0.2372 T12: 0.0268 REMARK 3 T13: 0.0118 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 5.5796 L22: 3.4061 REMARK 3 L33: 2.0616 L12: 1.9009 REMARK 3 L13: 1.7491 L23: 1.9141 REMARK 3 S TENSOR REMARK 3 S11: 0.2686 S12: -0.9448 S13: 0.3633 REMARK 3 S21: 0.4056 S22: -0.2116 S23: 0.2458 REMARK 3 S31: 0.0617 S32: -0.0755 S33: -0.0117 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 438 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0105 -3.2263 23.0205 REMARK 3 T TENSOR REMARK 3 T11: 0.1929 T22: 0.2178 REMARK 3 T33: 0.1567 T12: 0.0221 REMARK 3 T13: 0.0246 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 2.7904 L22: 3.0943 REMARK 3 L33: 2.1431 L12: 0.3978 REMARK 3 L13: -0.5922 L23: -0.5380 REMARK 3 S TENSOR REMARK 3 S11: 0.0401 S12: -0.1440 S13: -0.0336 REMARK 3 S21: 0.2877 S22: 0.0286 S23: 0.1372 REMARK 3 S31: -0.0393 S32: -0.0113 S33: -0.0682 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 439 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0319 7.3783 20.8828 REMARK 3 T TENSOR REMARK 3 T11: 0.2228 T22: 0.3066 REMARK 3 T33: 0.2301 T12: -0.0353 REMARK 3 T13: 0.0113 T23: -0.0407 REMARK 3 L TENSOR REMARK 3 L11: 4.3310 L22: 4.6059 REMARK 3 L33: 2.4147 L12: -1.5873 REMARK 3 L13: -0.1901 L23: -0.2348 REMARK 3 S TENSOR REMARK 3 S11: 0.1431 S12: 0.0746 S13: 0.4245 REMARK 3 S21: 0.0088 S22: -0.1371 S23: -0.3664 REMARK 3 S31: -0.3880 S32: 0.2375 S33: -0.0009 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 497 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7897 -0.2700 15.0370 REMARK 3 T TENSOR REMARK 3 T11: 0.2541 T22: 0.2458 REMARK 3 T33: 0.2096 T12: 0.0202 REMARK 3 T13: -0.0122 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 3.7251 L22: 1.1786 REMARK 3 L33: 0.8804 L12: 0.9142 REMARK 3 L13: -0.5388 L23: -0.2089 REMARK 3 S TENSOR REMARK 3 S11: -0.0604 S12: 0.3675 S13: 0.2640 REMARK 3 S21: -0.0120 S22: 0.0226 S23: 0.1714 REMARK 3 S31: 0.0196 S32: -0.1083 S33: -0.0574 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 305 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8435 0.6284 -9.3325 REMARK 3 T TENSOR REMARK 3 T11: 0.4230 T22: 0.4437 REMARK 3 T33: 0.2902 T12: -0.1108 REMARK 3 T13: 0.1348 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 4.9490 L22: 4.8505 REMARK 3 L33: 5.2845 L12: -2.0408 REMARK 3 L13: 2.9547 L23: -1.1585 REMARK 3 S TENSOR REMARK 3 S11: 0.1794 S12: 0.9630 S13: -0.1443 REMARK 3 S21: -0.8443 S22: -0.1741 S23: -0.1594 REMARK 3 S31: 0.0814 S32: 0.7173 S33: -0.0970 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 339 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3152 3.5573 -5.2637 REMARK 3 T TENSOR REMARK 3 T11: 0.3514 T22: 0.2739 REMARK 3 T33: 0.1871 T12: -0.0059 REMARK 3 T13: 0.0260 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.9146 L22: 2.8236 REMARK 3 L33: 3.0213 L12: 0.3859 REMARK 3 L13: 0.7138 L23: 0.1474 REMARK 3 S TENSOR REMARK 3 S11: -0.1378 S12: 0.2105 S13: 0.0841 REMARK 3 S21: -0.4277 S22: 0.0937 S23: 0.1056 REMARK 3 S31: -0.2156 S32: 0.0077 S33: 0.1020 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 438 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2235 -5.5890 6.6153 REMARK 3 T TENSOR REMARK 3 T11: 0.2112 T22: 0.2638 REMARK 3 T33: 0.2674 T12: 0.0473 REMARK 3 T13: 0.0384 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 2.9255 L22: 4.1719 REMARK 3 L33: 3.4877 L12: 0.9867 REMARK 3 L13: 0.9496 L23: 0.3754 REMARK 3 S TENSOR REMARK 3 S11: -0.0278 S12: -0.2049 S13: -0.5503 REMARK 3 S21: -0.0374 S22: -0.0601 S23: -0.2471 REMARK 3 S31: 0.4022 S32: 0.0903 S33: 0.1389 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 497 THROUGH 549 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7659 0.5045 1.6582 REMARK 3 T TENSOR REMARK 3 T11: 0.2737 T22: 0.2705 REMARK 3 T33: 0.2961 T12: 0.0384 REMARK 3 T13: 0.0274 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 3.4858 L22: 2.0043 REMARK 3 L33: 4.3719 L12: 0.7529 REMARK 3 L13: 2.1072 L23: 0.6630 REMARK 3 S TENSOR REMARK 3 S11: 0.1013 S12: -0.0805 S13: 0.0899 REMARK 3 S21: -0.1985 S22: -0.1668 S23: 0.2940 REMARK 3 S31: 0.1108 S32: -0.5578 S33: 0.0448 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 687 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3302 16.8639 26.7219 REMARK 3 T TENSOR REMARK 3 T11: 0.5695 T22: 0.4020 REMARK 3 T33: 0.5485 T12: 0.0151 REMARK 3 T13: 0.1587 T23: -0.1347 REMARK 3 L TENSOR REMARK 3 L11: 5.2535 L22: 6.1348 REMARK 3 L33: 1.1812 L12: 0.2853 REMARK 3 L13: -2.4246 L23: 0.1820 REMARK 3 S TENSOR REMARK 3 S11: 0.2203 S12: -0.3686 S13: 0.7901 REMARK 3 S21: -0.0608 S22: -0.4056 S23: 0.0529 REMARK 3 S31: -1.0966 S32: -0.3649 S33: 0.0347 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 687 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1611 -16.4657 -11.2070 REMARK 3 T TENSOR REMARK 3 T11: 0.8127 T22: 0.4204 REMARK 3 T33: 0.6375 T12: 0.0021 REMARK 3 T13: -0.0620 T23: -0.0573 REMARK 3 L TENSOR REMARK 3 L11: 4.5710 L22: 6.6217 REMARK 3 L33: 4.6811 L12: -0.4384 REMARK 3 L13: 3.1079 L23: 0.0024 REMARK 3 S TENSOR REMARK 3 S11: 0.1619 S12: 0.6056 S13: -0.8569 REMARK 3 S21: -0.4836 S22: -0.2243 S23: 0.3969 REMARK 3 S31: 1.6293 S32: -0.2193 S33: 0.1000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DID COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213237. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22338 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.25500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 0.05M MGCL2, 0.067M REMARK 280 NACL, 0.1M TRIS, PH 8.3, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.49500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 ASN A 304 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 465 LYS C 686 REMARK 465 SER C 697 REMARK 465 SER C 698 REMARK 465 SER C 699 REMARK 465 LYS D 686 REMARK 465 SER D 697 REMARK 465 SER D 698 REMARK 465 SER D 699 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 305 OG REMARK 470 LEU A 306 CG CD1 CD2 REMARK 470 ARG A 335 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 466 CG CD1 CD2 REMARK 470 LYS A 467 CG CD CE NZ REMARK 470 SER A 468 OG REMARK 470 GLU A 470 CG CD OE1 OE2 REMARK 470 ARG A 548 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 550 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 306 CG CD1 CD2 REMARK 470 ASP B 332 CG OD1 OD2 REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 462 CG CD1 CD2 REMARK 470 SER B 463 OG REMARK 470 SER B 464 OG REMARK 470 THR B 465 OG1 CG2 REMARK 470 LEU B 466 CG CD1 CD2 REMARK 470 LYS B 467 CG CD CE NZ REMARK 470 LEU B 469 CG CD1 CD2 REMARK 470 GLU B 470 CD OE1 OE2 REMARK 470 LYS B 531 CG CD CE NZ REMARK 470 ARG B 548 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 549 CG CD1 CD2 REMARK 470 HIS C 687 CG ND1 CD2 CE1 NE2 REMARK 470 HIS D 687 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 755 O HOH B 761 1.96 REMARK 500 OH TYR B 331 O HOH B 701 1.97 REMARK 500 O HOH A 792 O HOH A 801 1.98 REMARK 500 OE1 GLU A 542 O HOH A 701 1.99 REMARK 500 O HOH A 741 O HOH A 764 1.99 REMARK 500 O HOH A 746 O HOH A 792 2.11 REMARK 500 OE1 GLU B 323 O HOH B 702 2.12 REMARK 500 NE2 GLN A 314 O HOH A 702 2.15 REMARK 500 O HOH A 786 O HOH A 788 2.17 REMARK 500 O HOH A 789 O HOH A 796 2.18 REMARK 500 O HOH A 760 O HOH A 764 2.18 REMARK 500 O LEU A 306 N LEU A 308 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 782 O HOH C 702 2546 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 306 -169.10 55.85 REMARK 500 ALA A 307 -54.91 54.20 REMARK 500 PRO A 333 1.77 -67.18 REMARK 500 THR A 465 174.72 63.58 REMARK 500 ARG A 548 -79.91 58.16 REMARK 500 LEU A 549 154.09 68.11 REMARK 500 TYR B 331 97.94 -26.47 REMARK 500 THR B 334 70.45 165.65 REMARK 500 PHE B 461 74.49 -61.56 REMARK 500 SER B 463 81.21 71.01 REMARK 500 SER B 464 45.98 -89.47 REMARK 500 LEU B 466 -147.62 62.15 REMARK 500 LYS B 467 10.62 -60.84 REMARK 500 ARG B 548 -108.60 -84.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5CK A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5CK B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DL4 RELATED DB: PDB REMARK 900 RELATED ID: 5DKS RELATED DB: PDB REMARK 900 RELATED ID: 5DKG RELATED DB: PDB REMARK 900 RELATED ID: 5DKE RELATED DB: PDB REMARK 900 RELATED ID: 5DKB RELATED DB: PDB REMARK 900 RELATED ID: 5DK9 RELATED DB: PDB REMARK 900 RELATED ID: 5DIG RELATED DB: PDB REMARK 900 RELATED ID: 5DIE RELATED DB: PDB REMARK 900 RELATED ID: 5DI7 RELATED DB: PDB DBREF 5DID A 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5DID B 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5DID C 686 699 UNP Q15596 NCOA2_HUMAN 686 699 DBREF 5DID D 686 699 UNP Q15596 NCOA2_HUMAN 686 699 SEQADV 5DID SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 5DID SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 A 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 A 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 A 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 A 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 A 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 A 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 A 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 A 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 A 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 A 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 A 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 A 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 A 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 A 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 A 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 A 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 A 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 A 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 A 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 B 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 B 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 B 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 B 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 B 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 B 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 B 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 B 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 B 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 B 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 B 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 B 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 B 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 B 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 B 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 B 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 B 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 B 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 B 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 B 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 C 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 C 14 SER SEQRES 1 D 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 D 14 SER HET 5CK A 601 20 HET 5CK B 601 20 HETNAM 5CK (1S,3AR,5S,7AS)-5-(2,3-DIFLUORO-4-HYDROXYPHENYL)-7A- HETNAM 2 5CK METHYLOCTAHYDRO-1H-INDEN-1-OL FORMUL 5 5CK 2(C16 H20 F2 O2) FORMUL 7 HOH *173(H2 O) HELIX 1 AA1 THR A 311 ALA A 322 1 12 HELIX 2 AA2 SER A 338 LYS A 362 1 25 HELIX 3 AA3 GLY A 366 LEU A 370 5 5 HELIX 4 AA4 THR A 371 SER A 395 1 25 HELIX 5 AA5 ASP A 411 LYS A 416 1 6 HELIX 6 AA6 MET A 421 MET A 438 1 18 HELIX 7 AA7 GLN A 441 SER A 456 1 16 HELIX 8 AA8 GLY A 457 PHE A 461 5 5 HELIX 9 AA9 LEU A 466 ALA A 493 1 28 HELIX 10 AB1 THR A 496 LYS A 531 1 36 HELIX 11 AB2 SER A 537 ALA A 546 1 10 HELIX 12 AB3 THR B 311 GLU B 323 1 13 HELIX 13 AB4 SER B 338 LYS B 362 1 25 HELIX 14 AB5 GLY B 366 LEU B 370 5 5 HELIX 15 AB6 THR B 371 ARG B 394 1 24 HELIX 16 AB7 ASN B 413 VAL B 418 5 6 HELIX 17 AB8 MET B 421 ASN B 439 1 19 HELIX 18 AB9 GLN B 441 SER B 456 1 16 HELIX 19 AC1 LYS B 467 ALA B 493 1 27 HELIX 20 AC2 THR B 496 LYS B 531 1 36 HELIX 21 AC3 SER B 537 ALA B 546 1 10 HELIX 22 AC4 LYS C 688 LEU C 694 1 7 HELIX 23 AC5 LYS D 688 ASP D 696 1 9 SHEET 1 AA1 2 LEU A 402 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 LEU A 410 -1 O LEU A 410 N LEU A 402 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 CISPEP 1 ASP B 332 PRO B 333 0 -13.99 SITE 1 AC1 9 MET A 343 GLU A 353 LEU A 387 MET A 388 SITE 2 AC1 9 LEU A 391 ARG A 394 GLY A 521 HIS A 524 SITE 3 AC1 9 LEU A 525 SITE 1 AC2 8 GLU B 353 LEU B 387 MET B 388 LEU B 391 SITE 2 AC2 8 ARG B 394 GLY B 521 HIS B 524 LEU B 525 CRYST1 55.942 82.990 58.273 90.00 109.02 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017876 0.000000 0.006162 0.00000 SCALE2 0.000000 0.012050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018152 0.00000