HEADER HYDROLASE 02-SEP-15 5DJF TITLE STRUCTURE OF M. TUBERCULOSIS CYSQ, A PAP PHOSPHATASE - LIGAND-FREE TITLE 2 STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3'-PHOSPHOADENOSINE 5'-PHOSPHATE PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYSQ, PAP PHOSPHATASE, 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE, COMPND 5 5-BISPHOSPHONUCLEOSIDE 3'(2')-PHOSPHOHYDROLASE, D-FRUCTOSE-1,6- COMPND 6 BISPHOSPHATE 1-PHOSPHOHYDROLASE, DPNPASE, FRUCTOSE-1,6- COMPND 7 BISPHOSPHATASE, FBPASE, INOSITOL-1-MONOPHOSPHATASE,IMPASE, INOSITOL- COMPND 8 1-PHOSPHATASE; COMPND 9 EC: 3.1.3.7, 3.1.3.11, 3.1.3.25; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: CYSQ, MT2189; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS CYSQ, PAP PHOSPHATASE, APO-ENZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.I.ERICKSON,A.J.FISHER REVDAT 4 06-MAR-24 5DJF 1 REMARK REVDAT 3 22-NOV-17 5DJF 1 JRNL REMARK REVDAT 2 02-DEC-15 5DJF 1 JRNL REVDAT 1 11-NOV-15 5DJF 0 JRNL AUTH A.I.ERICKSON,R.D.SARSAM,A.J.FISHER JRNL TITL CRYSTAL STRUCTURES OF MYCOBACTERIUM TUBERCULOSIS CYSQ, WITH JRNL TITL 2 SUBSTRATE AND PRODUCTS BOUND. JRNL REF BIOCHEMISTRY V. 54 6830 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 26512869 JRNL DOI 10.1021/ACS.BIOCHEM.5B01000 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 26208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.2125 - 3.5356 0.98 2945 149 0.1531 0.1907 REMARK 3 2 3.5356 - 2.8066 0.98 2811 165 0.1512 0.1743 REMARK 3 3 2.8066 - 2.4519 0.98 2780 171 0.1576 0.1970 REMARK 3 4 2.4519 - 2.2278 0.98 2765 149 0.1617 0.2209 REMARK 3 5 2.2278 - 2.0681 0.98 2761 142 0.1619 0.1749 REMARK 3 6 2.0681 - 1.9462 0.97 2736 145 0.1661 0.2236 REMARK 3 7 1.9462 - 1.8487 0.98 2736 142 0.1723 0.2175 REMARK 3 8 1.8487 - 1.7682 0.97 2698 146 0.1927 0.2357 REMARK 3 9 1.7682 - 1.7002 0.94 2650 117 0.2208 0.2894 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2087 REMARK 3 ANGLE : 1.411 2850 REMARK 3 CHIRALITY : 0.085 318 REMARK 3 PLANARITY : 0.006 377 REMARK 3 DIHEDRAL : 12.613 754 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID -18:17) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1421 29.3236 19.9405 REMARK 3 T TENSOR REMARK 3 T11: 0.1241 T22: 0.2494 REMARK 3 T33: 0.2382 T12: 0.0137 REMARK 3 T13: 0.0228 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 4.7844 L22: 2.1167 REMARK 3 L33: 2.1611 L12: -0.6585 REMARK 3 L13: -1.1180 L23: -0.9901 REMARK 3 S TENSOR REMARK 3 S11: 0.0553 S12: -0.4689 S13: 0.4857 REMARK 3 S21: 0.2922 S22: 0.0396 S23: 0.5813 REMARK 3 S31: 0.0442 S32: -0.2831 S33: -0.0992 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 18:123) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6711 32.5953 21.0695 REMARK 3 T TENSOR REMARK 3 T11: 0.0419 T22: 0.0752 REMARK 3 T33: 0.0386 T12: 0.0030 REMARK 3 T13: 0.0010 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.4805 L22: 2.4072 REMARK 3 L33: 0.6919 L12: 0.4817 REMARK 3 L13: 0.1579 L23: 0.0681 REMARK 3 S TENSOR REMARK 3 S11: -0.0342 S12: -0.0120 S13: -0.0139 REMARK 3 S21: -0.0706 S22: 0.0619 S23: -0.0866 REMARK 3 S31: 0.0142 S32: 0.0580 S33: -0.0278 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 124:164) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4156 38.3548 4.5151 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.1153 REMARK 3 T33: 0.0845 T12: -0.0172 REMARK 3 T13: -0.0184 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 1.1265 L22: 0.9443 REMARK 3 L33: 1.7863 L12: 0.2069 REMARK 3 L13: -1.1707 L23: -0.2515 REMARK 3 S TENSOR REMARK 3 S11: -0.0439 S12: 0.2118 S13: 0.0795 REMARK 3 S21: -0.1872 S22: 0.0910 S23: 0.0119 REMARK 3 S31: -0.0865 S32: -0.0883 S33: -0.0443 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 165:249) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2615 30.6732 2.8479 REMARK 3 T TENSOR REMARK 3 T11: 0.1333 T22: 0.1203 REMARK 3 T33: 0.1190 T12: 0.0050 REMARK 3 T13: 0.0091 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.2120 L22: 0.5689 REMARK 3 L33: 1.4345 L12: 0.3286 REMARK 3 L13: -0.4360 L23: -0.5591 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: -0.0372 S13: -0.0377 REMARK 3 S21: -0.0433 S22: -0.0462 S23: -0.0745 REMARK 3 S31: 0.0165 S32: 0.1520 S33: 0.0652 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 250:267) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4730 28.1114 -9.3387 REMARK 3 T TENSOR REMARK 3 T11: 0.2014 T22: 0.1521 REMARK 3 T33: 0.1224 T12: -0.0183 REMARK 3 T13: 0.0439 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 2.6222 L22: 4.5461 REMARK 3 L33: 7.2472 L12: -2.1952 REMARK 3 L13: -3.9454 L23: 2.8081 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: 0.2338 S13: -0.0474 REMARK 3 S21: -0.2589 S22: 0.0192 S23: -0.2405 REMARK 3 S31: 0.4755 S32: 0.0322 S33: 0.0323 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000211084. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12709 REMARK 200 MONOCHROMATOR : SIDE SCATTERING I-BEAM BENT REMARK 200 SINGLE CRYSTAL, ASYMMETRIC CUT REMARK 200 4.9650 DEGREES REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JULY 4, 2012, XDS MARCH REMARK 200 30, 2013 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26208 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 38.203 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.190 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.41 REMARK 200 R MERGE FOR SHELL (I) : 0.40100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG1500, 20% GLYCEROL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.16000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.84000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.84000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.16000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 VAL A 2 REMARK 465 SER A 3 REMARK 465 PRO A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 ASP A 8 REMARK 465 LEU A 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 555 O HOH A 669 1.98 REMARK 500 O HOH A 578 O HOH A 605 2.04 REMARK 500 O HOH A 612 O HOH A 635 2.04 REMARK 500 O HOH A 619 O HOH A 656 2.09 REMARK 500 O HOH A 605 O HOH A 626 2.09 REMARK 500 O HOH A 604 O HOH A 619 2.10 REMARK 500 O HOH A 417 O HOH A 534 2.11 REMARK 500 O HOH A 528 O HOH A 631 2.14 REMARK 500 O HOH A 437 O HOH A 622 2.14 REMARK 500 O HOH A 419 O HOH A 504 2.15 REMARK 500 OE1 GLU A 36 O HOH A 401 2.15 REMARK 500 O HOH A 485 O HOH A 658 2.16 REMARK 500 O HOH A 611 O HOH A 619 2.18 REMARK 500 O HOH A 574 O HOH A 575 2.18 REMARK 500 O THR A 10 O HOH A 402 2.19 REMARK 500 O HOH A 471 O HOH A 474 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 687 O HOH A 694 2565 2.14 REMARK 500 O HOH A 427 O HOH A 494 3655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 79 9.81 58.57 REMARK 500 SER A 118 -74.84 -76.87 REMARK 500 ARG A 165 130.86 -172.15 REMARK 500 SER A 186 136.27 73.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 693 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 695 DISTANCE = 6.57 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 50 OD1 REMARK 620 2 ASP A 50 OD2 44.0 REMARK 620 3 GLU A 73 OE1 73.7 66.4 REMARK 620 4 ASP A 91 OD1 94.7 136.6 93.5 REMARK 620 5 LEU A 93 O 95.6 110.6 167.5 80.7 REMARK 620 6 HOH A 556 O 177.7 133.8 105.5 87.4 85.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5DJJ RELATED DB: PDB REMARK 900 RELATED ID: 5DJI RELATED DB: PDB REMARK 900 RELATED ID: 5DJH RELATED DB: PDB REMARK 900 RELATED ID: 5DJG RELATED DB: PDB REMARK 900 RELATED ID: 5DJK RELATED DB: PDB DBREF 5DJF A 2 267 UNP P9WKJ0 CYSQ_MYCTO 2 267 SEQADV 5DJF MET A -21 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF GLY A -20 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF SER A -19 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF SER A -18 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF HIS A -17 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF HIS A -16 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF HIS A -15 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF HIS A -14 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF HIS A -13 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF HIS A -12 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF SER A -11 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF SER A -9 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF GLY A -8 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF LEU A -7 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF VAL A -6 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF PRO A -5 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF ARG A -4 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF GLY A -3 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF SER A -2 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF HIS A -1 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF MET A 0 UNP P9WKJ0 EXPRESSION TAG SEQADV 5DJF VAL A 1 UNP P9WKJ0 EXPRESSION TAG SEQRES 1 A 288 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 288 LEU VAL PRO ARG GLY SER HIS MET VAL VAL SER PRO ALA SEQRES 3 A 288 ALA PRO ASP LEU THR ASP ASP LEU THR ASP ALA GLU LEU SEQRES 4 A 288 ALA ALA ASP LEU ALA ALA ASP ALA GLY LYS LEU LEU LEU SEQRES 5 A 288 GLN VAL ARG ALA GLU ILE GLY PHE ASP GLN PRO TRP THR SEQRES 6 A 288 LEU GLY GLU ALA GLY ASP ARG GLN ALA ASN SER LEU LEU SEQRES 7 A 288 LEU ARG ARG LEU GLN ALA GLU ARG PRO GLY ASP ALA VAL SEQRES 8 A 288 LEU SER GLU GLU ALA HIS ASP ASP LEU ALA ARG LEU LYS SEQRES 9 A 288 SER ASP ARG VAL TRP ILE ILE ASP PRO LEU ASP GLY THR SEQRES 10 A 288 ARG GLU PHE SER THR PRO GLY ARG ASP ASP TRP ALA VAL SEQRES 11 A 288 HIS ILE ALA LEU TRP ARG ARG SER SER ASN GLY GLN PRO SEQRES 12 A 288 GLU ILE THR ASP ALA ALA VAL ALA LEU PRO ALA ARG GLY SEQRES 13 A 288 ASN VAL VAL TYR ARG THR ASP THR VAL THR SER GLY ALA SEQRES 14 A 288 ALA PRO ALA GLY VAL PRO GLY THR LEU ARG ILE ALA VAL SEQRES 15 A 288 SER ALA THR ARG PRO PRO ALA VAL LEU HIS ARG ILE ARG SEQRES 16 A 288 GLN THR LEU ALA ILE GLN PRO VAL SER ILE GLY SER ALA SEQRES 17 A 288 GLY ALA LYS ALA MET ALA VAL ILE ASP GLY TYR VAL ASP SEQRES 18 A 288 ALA TYR LEU HIS ALA GLY GLY GLN TRP GLU TRP ASP SER SEQRES 19 A 288 ALA ALA PRO ALA GLY VAL MET LEU ALA ALA GLY MET HIS SEQRES 20 A 288 ALA SER ARG LEU ASP GLY SER PRO LEU ARG TYR ASN GLN SEQRES 21 A 288 LEU ASP PRO TYR LEU PRO ASP LEU LEU MET CYS ARG ALA SEQRES 22 A 288 GLU VAL ALA PRO ILE LEU LEU GLY ALA ILE ALA ASP ALA SEQRES 23 A 288 TRP ARG HET NA A 301 1 HET GOL A 302 14 HET GOL A 303 14 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NA NA 1+ FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *295(H2 O) HELIX 1 AA1 THR A 14 GLY A 38 1 25 HELIX 2 AA2 GLN A 41 ARG A 65 1 25 HELIX 3 AA3 LEU A 79 SER A 84 5 6 HELIX 4 AA4 GLY A 95 SER A 100 1 6 HELIX 5 AA5 PRO A 167 ARG A 174 1 8 HELIX 6 AA6 SER A 186 ASP A 196 1 11 HELIX 7 AA7 SER A 213 ALA A 223 1 11 HELIX 8 AA8 VAL A 254 TRP A 266 1 13 SHEET 1 AA1 5 ALA A 69 SER A 72 0 SHEET 2 AA1 5 ARG A 86 ASP A 94 1 O TRP A 88 N LEU A 71 SHEET 3 AA1 5 ALA A 108 ARG A 115 -1 O TRP A 114 N VAL A 87 SHEET 4 AA1 5 ILE A 124 LEU A 131 -1 O ASP A 126 N LEU A 113 SHEET 5 AA1 5 VAL A 137 ARG A 140 -1 O TYR A 139 N VAL A 129 SHEET 1 AA2 5 ILE A 179 SER A 183 0 SHEET 2 AA2 5 LEU A 157 VAL A 161 1 N ILE A 159 O VAL A 182 SHEET 3 AA2 5 ALA A 201 HIS A 204 1 O ALA A 201 N ALA A 160 SHEET 4 AA2 5 LEU A 247 CYS A 250 -1 O MET A 249 N TYR A 202 SHEET 5 AA2 5 HIS A 226 SER A 228 -1 N HIS A 226 O CYS A 250 SHEET 1 AA3 2 GLN A 208 TRP A 209 0 SHEET 2 AA3 2 TYR A 243 LEU A 244 -1 O LEU A 244 N GLN A 208 LINK OD1 ASP A 50 NA NA A 301 1555 1555 3.10 LINK OD2 ASP A 50 NA NA A 301 1555 1555 2.39 LINK OE1 GLU A 73 NA NA A 301 1555 1555 2.64 LINK OD1 ASP A 91 NA NA A 301 1555 1555 2.59 LINK O LEU A 93 NA NA A 301 1555 1555 2.48 LINK NA NA A 301 O HOH A 556 1555 1555 2.44 SITE 1 AC1 5 ASP A 50 GLU A 73 ASP A 91 LEU A 93 SITE 2 AC1 5 HOH A 556 SITE 1 AC2 6 ASP A 25 GLN A 32 LEU A 56 SER A 84 SITE 2 AC2 6 ASP A 85 HOH A 439 SITE 1 AC3 5 PRO A 166 ASP A 196 TYR A 198 HOH A 413 SITE 2 AC3 5 HOH A 417 CRYST1 40.320 57.900 101.680 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024802 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017271 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009835 0.00000