HEADER SIGNALING PROTEIN 02-SEP-15 5DJT TITLE CRYSTAL STRUCTURE OF LOV2 (C450A) DOMAIN IN COMPLEX WITH ZDK2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NPH1-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 404-546; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ENGINEERED PROTEIN, ZDK2 AFFIBODY; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AVENA SATIVA; SOURCE 3 ORGANISM_COMMON: OAT; SOURCE 4 ORGANISM_TAXID: 4498; SOURCE 5 GENE: NPH1-2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 10 ORGANISM_TAXID: 1280; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN BINDING, PROTEIN ENGINEERING, SIGNALING PROTEIN, PHOTOSWITCH, KEYWDS 2 LIGHT-INDUCED SIGNAL TRANSDUCTION, LOV2, AFFIBODY, COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.TARNAWSKI,H.WANG,H.YUMEREFENDI,K.M.HAHN,I.SCHLICHTING REVDAT 4 10-JAN-24 5DJT 1 REMARK REVDAT 3 07-SEP-16 5DJT 1 JRNL REVDAT 2 27-JUL-16 5DJT 1 JRNL REVDAT 1 20-JUL-16 5DJT 0 JRNL AUTH H.WANG,M.VILELA,A.WINKLER,M.TARNAWSKI,I.SCHLICHTING, JRNL AUTH 2 H.YUMEREFENDI,B.KUHLMAN,R.LIU,G.DANUSER,K.M.HAHN JRNL TITL LOVTRAP: AN OPTOGENETIC SYSTEM FOR PHOTOINDUCED PROTEIN JRNL TITL 2 DISSOCIATION. JRNL REF NAT.METHODS V. 13 755 2016 JRNL REFN ESSN 1548-7105 JRNL PMID 27427858 JRNL DOI 10.1038/NMETH.3926 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 44463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5187 - 3.5268 0.99 2732 144 0.1518 0.1580 REMARK 3 2 3.5268 - 2.7997 0.99 2691 142 0.1570 0.1725 REMARK 3 3 2.7997 - 2.4459 0.99 2630 138 0.1550 0.1885 REMARK 3 4 2.4459 - 2.2223 0.99 2620 138 0.1438 0.1687 REMARK 3 5 2.2223 - 2.0630 0.99 2656 140 0.1339 0.1678 REMARK 3 6 2.0630 - 1.9414 1.00 2641 139 0.1358 0.1703 REMARK 3 7 1.9414 - 1.8442 1.00 2635 139 0.1308 0.1783 REMARK 3 8 1.8442 - 1.7639 1.00 2637 138 0.1275 0.1482 REMARK 3 9 1.7639 - 1.6960 1.00 2612 138 0.1272 0.1662 REMARK 3 10 1.6960 - 1.6375 1.00 2636 139 0.1269 0.1663 REMARK 3 11 1.6375 - 1.5863 1.00 2660 140 0.1207 0.1626 REMARK 3 12 1.5863 - 1.5409 1.00 2618 137 0.1187 0.1551 REMARK 3 13 1.5409 - 1.5004 1.00 2601 137 0.1224 0.1573 REMARK 3 14 1.5004 - 1.4638 1.00 2637 139 0.1445 0.2114 REMARK 3 15 1.4638 - 1.4305 0.99 2573 136 0.1955 0.2492 REMARK 3 16 1.4305 - 1.4001 1.00 2661 139 0.2952 0.2828 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1716 REMARK 3 ANGLE : 1.343 2332 REMARK 3 CHIRALITY : 0.093 259 REMARK 3 PLANARITY : 0.007 304 REMARK 3 DIHEDRAL : 15.917 660 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DJT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213280. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00005 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44465 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2WKQ AND A HOMOLOGY MODEL BASED ON 2KZJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRI-SODIUM CITRATE PH 5.6, 0.2 M REMARK 280 AMMONIUM ACETATE, 32% (W/V) PEG 4000 AND 0.1 M COPPER(II) REMARK 280 CHLORIDE AS AN ADDITIVE, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 55.07000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.07000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.75500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 55.07000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.07000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.75500 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 55.07000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 55.07000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 18.75500 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 55.07000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 55.07000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 18.75500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 402 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 545 O HOH A 701 2.14 REMARK 500 NH2 ARG A 421 O HOH A 702 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 838 O HOH B 104 6444 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 522 -134.47 52.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 886 DISTANCE = 6.00 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 603 DBREF 5DJT A 404 546 UNP O49004 O49004_AVESA 407 549 DBREF 5DJT B -2 58 PDB 5DJT 5DJT -2 58 SEQADV 5DJT GLY A 402 UNP O49004 EXPRESSION TAG SEQADV 5DJT SER A 403 UNP O49004 EXPRESSION TAG SEQADV 5DJT ALA A 450 UNP O49004 CYS 453 CONFLICT SEQRES 1 A 145 GLY SER LEU ALA THR THR LEU GLU ARG ILE GLU LYS ASN SEQRES 2 A 145 PHE VAL ILE THR ASP PRO ARG LEU PRO ASP ASN PRO ILE SEQRES 3 A 145 ILE PHE ALA SER ASP SER PHE LEU GLN LEU THR GLU TYR SEQRES 4 A 145 SER ARG GLU GLU ILE LEU GLY ARG ASN ALA ARG PHE LEU SEQRES 5 A 145 GLN GLY PRO GLU THR ASP ARG ALA THR VAL ARG LYS ILE SEQRES 6 A 145 ARG ASP ALA ILE ASP ASN GLN THR GLU VAL THR VAL GLN SEQRES 7 A 145 LEU ILE ASN TYR THR LYS SER GLY LYS LYS PHE TRP ASN SEQRES 8 A 145 LEU PHE HIS LEU GLN PRO MET ARG ASP GLN LYS GLY ASP SEQRES 9 A 145 VAL GLN TYR PHE ILE GLY VAL GLN LEU ASP GLY THR GLU SEQRES 10 A 145 HIS VAL ARG ASP ALA ALA GLU ARG GLU GLY VAL MET LEU SEQRES 11 A 145 ILE LYS LYS THR ALA GLU ASN ILE ASP GLU ALA ALA LYS SEQRES 12 A 145 GLU LEU SEQRES 1 B 61 GLY GLY SER VAL ASP ASN LYS PHE ASN LYS GLU MET LEU SEQRES 2 B 61 SER ALA ARG VAL GLU ILE TYR GLY LEU PRO ASN LEU ASN SEQRES 3 B 61 TRP GLY GLN ARG PHE ALA PHE ILE SER SER LEU THR ASP SEQRES 4 B 61 ASP PRO SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS SEQRES 5 B 61 LYS LEU ASN ASP ALA GLN ALA PRO LYS HET CU A 601 1 HET FMN A 602 31 HET CL A 603 1 HETNAM CU COPPER (II) ION HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM CL CHLORIDE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 CU CU 2+ FORMUL 4 FMN C17 H21 N4 O9 P FORMUL 5 CL CL 1- FORMUL 6 HOH *276(H2 O) HELIX 1 AA1 THR A 407 ILE A 411 5 5 HELIX 2 AA2 SER A 431 GLU A 439 1 9 HELIX 3 AA3 ASN A 449 GLN A 454 5 6 HELIX 4 AA4 ASP A 459 GLN A 473 1 15 HELIX 5 AA5 ARG A 521 GLU A 545 1 25 HELIX 6 AA6 ASN B 6 GLY B 18 1 13 HELIX 7 AA7 ASN B 23 ASP B 37 1 15 HELIX 8 AA8 GLN B 40 GLN B 55 1 16 SHEET 1 AA1 5 ILE A 427 ALA A 430 0 SHEET 2 AA1 5 PHE A 415 THR A 418 -1 N ILE A 417 O ILE A 428 SHEET 3 AA1 5 VAL A 506 GLY A 516 -1 O GLY A 511 N VAL A 416 SHEET 4 AA1 5 LYS A 489 ARG A 500 -1 N MET A 499 O TYR A 508 SHEET 5 AA1 5 VAL A 476 TYR A 483 -1 N ASN A 482 O PHE A 490 LINK NE2 HIS A 519 CU CU A 601 1555 1555 1.97 SITE 1 AC1 3 GLN A 479 HIS A 519 GLU A 525 SITE 1 AC2 25 VAL A 416 THR A 418 ASN A 425 ASN A 449 SITE 2 AC2 25 ALA A 450 ARG A 451 LEU A 453 GLN A 454 SITE 3 AC2 25 VAL A 463 ARG A 467 ILE A 470 ASN A 482 SITE 4 AC2 25 ASN A 492 PHE A 494 PHE A 509 GLY A 511 SITE 5 AC2 25 GLN A 513 CL A 603 HOH A 731 HOH A 748 SITE 6 AC2 25 HOH A 755 HOH A 779 HOH A 794 HOH A 802 SITE 7 AC2 25 HOH A 804 SITE 1 AC3 4 ASN A 425 ASN A 449 FMN A 602 HOH A 802 CRYST1 110.140 110.140 37.510 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009079 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009079 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026660 0.00000