HEADER TRANSFERASE/TRANSFERASE INHIBITOR 16-SEP-15 5DS3 TITLE CRYSTAL STRUCTURE OF CONSTITUTIVELY ACTIVE PARP-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (UNP RESIDUES 788-1012); COMPND 5 SYNONYM: PARP-1,ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 1,ARTD1, COMPND 6 NAD(+) ADP-RIBOSYLTRANSFERASE 1,ADPRT 1,POLY[ADP-RIBOSE] SYNTHASE 1; COMPND 7 EC: 2.4.2.30; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PARP1, ADPRT, PPOL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS ADP-RIBOSYL TRANSFERASE, PARP-1, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.F.LANGELIER,J.M.PASCAL REVDAT 5 16-OCT-24 5DS3 1 REMARK REVDAT 4 27-SEP-23 5DS3 1 REMARK REVDAT 3 25-DEC-19 5DS3 1 REMARK REVDAT 2 06-SEP-17 5DS3 1 JRNL REMARK REVDAT 1 27-JUL-16 5DS3 0 JRNL AUTH J.M.DAWICKI-MCKENNA,M.F.LANGELIER,J.E.DENIZIO,A.A.RICCIO, JRNL AUTH 2 C.D.CAO,K.R.KARCH,M.MCCAULEY,J.D.STEFFEN,B.E.BLACK, JRNL AUTH 3 J.M.PASCAL JRNL TITL PARP-1 ACTIVATION REQUIRES LOCAL UNFOLDING OF AN JRNL TITL 2 AUTOINHIBITORY DOMAIN. JRNL REF MOL.CELL V. 60 755 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 26626480 JRNL DOI 10.1016/J.MOLCEL.2015.10.013 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 10627 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 535 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 724 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.3920 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1887 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.26000 REMARK 3 B22 (A**2) : -1.26000 REMARK 3 B33 (A**2) : 4.08000 REMARK 3 B12 (A**2) : -1.26000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.456 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.287 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.224 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.127 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2006 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1932 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2707 ; 1.228 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4468 ; 0.706 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 245 ; 6.720 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;36.768 ;24.458 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 345 ;15.700 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;13.071 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 290 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2340 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 438 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 977 ; 1.150 ; 3.239 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 976 ; 1.150 ; 3.239 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1220 ; 2.057 ; 4.856 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1221 ; 2.056 ; 4.857 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1029 ; 1.006 ; 3.361 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1022 ; 0.996 ; 3.317 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1472 ; 1.762 ; 4.931 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2138 ; 4.766 ;25.358 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2137 ; 4.753 ;25.344 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 765 A 1010 REMARK 3 RESIDUE RANGE : A 1101 A 1104 REMARK 3 RESIDUE RANGE : A 1201 A 1227 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3590 37.2563 10.2977 REMARK 3 T TENSOR REMARK 3 T11: 0.1404 T22: 0.1345 REMARK 3 T33: 0.0335 T12: 0.0768 REMARK 3 T13: 0.0567 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 5.3666 L22: 4.8228 REMARK 3 L33: 1.8744 L12: 0.7058 REMARK 3 L13: -1.0878 L23: -0.1958 REMARK 3 S TENSOR REMARK 3 S11: -0.0781 S12: 0.1118 S13: -0.0648 REMARK 3 S21: -0.2827 S22: 0.0323 S23: -0.1146 REMARK 3 S31: -0.0404 S32: -0.0426 S33: 0.0458 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5DS3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213715. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11207 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3GJW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% PEG 3350, 0.2 M AMMONIUM REMARK 280 SULFATE, 0.1 M BIS-TRIS, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.73233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.46467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 67.09850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 111.83083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.36617 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.73233 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 89.46467 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 111.83083 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 67.09850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 22.36617 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 742 REMARK 465 GLY A 743 REMARK 465 SER A 744 REMARK 465 SER A 745 REMARK 465 HIS A 746 REMARK 465 HIS A 747 REMARK 465 HIS A 748 REMARK 465 HIS A 749 REMARK 465 HIS A 750 REMARK 465 HIS A 751 REMARK 465 SER A 752 REMARK 465 SER A 753 REMARK 465 GLY A 754 REMARK 465 LEU A 755 REMARK 465 VAL A 756 REMARK 465 PRO A 757 REMARK 465 ARG A 758 REMARK 465 GLY A 759 REMARK 465 SER A 760 REMARK 465 HIS A 761 REMARK 465 MET A 762 REMARK 465 THR A 763 REMARK 465 LYS A 764 REMARK 465 ALA A 823 REMARK 465 THR A 824 REMARK 465 THR A 825 REMARK 465 THR A 1011 REMARK 465 SER A 1012 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 781 CB OG REMARK 470 SER A 783 CB OG REMARK 470 SER A 785 CB OG REMARK 470 LYS A 852 CG CD CE NZ REMARK 470 GLN A 853 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 781 -150.31 -76.45 REMARK 500 SER A 783 -91.22 102.08 REMARK 500 ASP A 788 98.96 70.58 REMARK 500 ASN A 827 156.79 179.52 REMARK 500 ALA A 828 -73.21 109.17 REMARK 500 HIS A 855 155.89 -39.64 REMARK 500 ASN A 856 60.98 65.33 REMARK 500 ASN A 856 60.98 65.78 REMARK 500 PRO A 915 38.71 -91.02 REMARK 500 ASP A 965 -123.94 51.92 REMARK 500 ASN A 980 -71.41 -79.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 09L A 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1104 DBREF 5DS3 A 788 1012 UNP P09874 PARP1_HUMAN 788 1012 SEQADV 5DS3 MET A 742 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 743 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 744 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 745 UNP P09874 EXPRESSION TAG SEQADV 5DS3 HIS A 746 UNP P09874 EXPRESSION TAG SEQADV 5DS3 HIS A 747 UNP P09874 EXPRESSION TAG SEQADV 5DS3 HIS A 748 UNP P09874 EXPRESSION TAG SEQADV 5DS3 HIS A 749 UNP P09874 EXPRESSION TAG SEQADV 5DS3 HIS A 750 UNP P09874 EXPRESSION TAG SEQADV 5DS3 HIS A 751 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 752 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 753 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 754 UNP P09874 EXPRESSION TAG SEQADV 5DS3 LEU A 755 UNP P09874 EXPRESSION TAG SEQADV 5DS3 VAL A 756 UNP P09874 EXPRESSION TAG SEQADV 5DS3 PRO A 757 UNP P09874 EXPRESSION TAG SEQADV 5DS3 ARG A 758 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 759 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 760 UNP P09874 EXPRESSION TAG SEQADV 5DS3 HIS A 761 UNP P09874 EXPRESSION TAG SEQADV 5DS3 MET A 762 UNP P09874 EXPRESSION TAG SEQADV 5DS3 THR A 763 UNP P09874 EXPRESSION TAG SEQADV 5DS3 LYS A 764 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 765 UNP P09874 EXPRESSION TAG SEQADV 5DS3 LYS A 766 UNP P09874 EXPRESSION TAG SEQADV 5DS3 LEU A 767 UNP P09874 EXPRESSION TAG SEQADV 5DS3 PRO A 768 UNP P09874 EXPRESSION TAG SEQADV 5DS3 LYS A 769 UNP P09874 EXPRESSION TAG SEQADV 5DS3 PRO A 770 UNP P09874 EXPRESSION TAG SEQADV 5DS3 VAL A 771 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLN A 772 UNP P09874 EXPRESSION TAG SEQADV 5DS3 ASP A 773 UNP P09874 EXPRESSION TAG SEQADV 5DS3 LEU A 774 UNP P09874 EXPRESSION TAG SEQADV 5DS3 ILE A 775 UNP P09874 EXPRESSION TAG SEQADV 5DS3 LYS A 776 UNP P09874 EXPRESSION TAG SEQADV 5DS3 MET A 777 UNP P09874 EXPRESSION TAG SEQADV 5DS3 ILE A 778 UNP P09874 EXPRESSION TAG SEQADV 5DS3 PHE A 779 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 780 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 781 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 782 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 783 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 784 UNP P09874 EXPRESSION TAG SEQADV 5DS3 SER A 785 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 786 UNP P09874 EXPRESSION TAG SEQADV 5DS3 GLY A 787 UNP P09874 EXPRESSION TAG SEQRES 1 A 271 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 271 LEU VAL PRO ARG GLY SER HIS MET THR LYS SER LYS LEU SEQRES 3 A 271 PRO LYS PRO VAL GLN ASP LEU ILE LYS MET ILE PHE GLY SEQRES 4 A 271 SER GLY SER GLY SER GLY GLY ASP PRO ILE ASP VAL ASN SEQRES 5 A 271 TYR GLU LYS LEU LYS THR ASP ILE LYS VAL VAL ASP ARG SEQRES 6 A 271 ASP SER GLU GLU ALA GLU ILE ILE ARG LYS TYR VAL LYS SEQRES 7 A 271 ASN THR HIS ALA THR THR HIS ASN ALA TYR ASP LEU GLU SEQRES 8 A 271 VAL ILE ASP ILE PHE LYS ILE GLU ARG GLU GLY GLU CYS SEQRES 9 A 271 GLN ARG TYR LYS PRO PHE LYS GLN LEU HIS ASN ARG ARG SEQRES 10 A 271 LEU LEU TRP HIS GLY SER ARG THR THR ASN PHE ALA GLY SEQRES 11 A 271 ILE LEU SER GLN GLY LEU ARG ILE ALA PRO PRO GLU ALA SEQRES 12 A 271 PRO VAL THR GLY TYR MET PHE GLY LYS GLY ILE TYR PHE SEQRES 13 A 271 ALA ASP MET VAL SER LYS SER ALA ASN TYR CYS HIS THR SEQRES 14 A 271 SER GLN GLY ASP PRO ILE GLY LEU ILE LEU LEU GLY GLU SEQRES 15 A 271 VAL ALA LEU GLY ASN MET TYR GLU LEU LYS HIS ALA SER SEQRES 16 A 271 HIS ILE SER LYS LEU PRO LYS GLY LYS HIS SER VAL LYS SEQRES 17 A 271 GLY LEU GLY LYS THR THR PRO ASP PRO SER ALA ASN ILE SEQRES 18 A 271 SER LEU ASP GLY VAL ASP VAL PRO LEU GLY THR GLY ILE SEQRES 19 A 271 SER SER GLY VAL ASN ASP THR SER LEU LEU TYR ASN GLU SEQRES 20 A 271 TYR ILE VAL TYR ASP ILE ALA GLN VAL ASN LEU LYS TYR SEQRES 21 A 271 LEU LEU LYS LEU LYS PHE ASN PHE LYS THR SER HET 1PE A1101 16 HET 09L A1102 32 HET SO4 A1103 5 HET SO4 A1104 5 HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM 09L 4-(3-{[4-(CYCLOPROPYLCARBONYL)PIPERAZIN-1-YL]CARBONYL}- HETNAM 2 09L 4-FLUOROBENZYL)PHTHALAZIN-1(2H)-ONE HETNAM SO4 SULFATE ION HETSYN 1PE PEG400 HETSYN 09L OLAPARIB FORMUL 2 1PE C10 H22 O6 FORMUL 3 09L C24 H23 F N4 O3 FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 HOH *27(H2 O) HELIX 1 AA1 PRO A 768 GLY A 780 1 13 HELIX 2 AA2 PRO A 789 LYS A 796 1 8 HELIX 3 AA3 SER A 808 THR A 821 1 14 HELIX 4 AA4 GLY A 843 LYS A 849 1 7 HELIX 5 AA5 PRO A 850 LYS A 852 5 3 HELIX 6 AA6 ARG A 865 THR A 867 5 3 HELIX 7 AA7 ASN A 868 GLY A 876 1 9 HELIX 8 AA8 MET A 900 ASN A 906 1 7 HELIX 9 AA9 TYR A 907 HIS A 909 5 3 HELIX 10 AB1 PRO A 958 ASN A 961 5 4 HELIX 11 AB2 ASP A 993 ALA A 995 5 3 SHEET 1 AA1 5 THR A 799 VAL A 803 0 SHEET 2 AA1 5 ASP A 830 ARG A 841 -1 O LYS A 838 N LYS A 802 SHEET 3 AA1 5 VAL A 997 ASN A1008 -1 O LYS A1006 N GLU A 832 SHEET 4 AA1 5 ILE A 916 ALA A 925 -1 N ILE A 919 O LEU A1003 SHEET 5 AA1 5 ARG A 857 GLY A 863 -1 N ARG A 858 O VAL A 924 SHEET 1 AA2 4 ILE A 895 PHE A 897 0 SHEET 2 AA2 4 GLU A 988 VAL A 991 -1 O TYR A 989 N PHE A 897 SHEET 3 AA2 4 SER A 947 GLY A 950 -1 N GLY A 950 O GLU A 988 SHEET 4 AA2 4 MET A 929 LEU A 932 1 N LEU A 932 O LYS A 949 SHEET 1 AA3 3 GLY A 974 SER A 976 0 SHEET 2 AA3 3 GLY A 952 PRO A 956 -1 N THR A 955 O ILE A 975 SHEET 3 AA3 3 LEU A 984 TYR A 986 1 O LEU A 985 N THR A 954 SHEET 1 AA4 2 ILE A 962 LEU A 964 0 SHEET 2 AA4 2 VAL A 967 VAL A 969 -1 O VAL A 967 N LEU A 964 SSBOND 1 CYS A 845 CYS A 845 1555 7555 2.06 SITE 1 AC1 4 ARG A 865 ASN A 906 TYR A 907 HIS A 909 SITE 1 AC2 12 HIS A 862 GLY A 863 LEU A 877 ARG A 878 SITE 2 AC2 12 TYR A 889 GLY A 894 ILE A 895 TYR A 896 SITE 3 AC2 12 PHE A 897 SER A 904 TYR A 907 GLU A 988 SITE 1 AC3 4 LYS A 903 LEU A 984 LEU A 985 TYR A 986 SITE 1 AC4 3 ARG A 858 MET A 929 LYS A 949 CRYST1 93.405 93.405 134.197 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010706 0.006181 0.000000 0.00000 SCALE2 0.000000 0.012362 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007452 0.00000