HEADER HYDROLASE 22-SEP-15 5DWB TITLE CRYSTAL STRUCTURE OF SPECIFIC RESTRICTION ENDONUCLEASE AGEI-DNA TITLE 2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE-2 RESTRICTION ENZYME AGEI; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: R.AGEI,ENDONUCLEASE AGEI,TYPE II RESTRICTION ENZYME AGEI; COMPND 5 EC: 3.1.21.4; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*TP*TP*CP*GP*AP*CP*CP*GP*GP*TP*CP*GP*A*)-3'); COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THALASSOBIUS GELATINOVORUS; SOURCE 3 ORGANISM_TAXID: 53501; SOURCE 4 GENE: AGEIR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ER2566; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRRS-AGEIRM; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS RESTRICTION ENDONUCLEASE, PD-(D/E)XK NUCLEASE, PROTEIN-DNA COMPLEX, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.TAMULAITIENE,V.JOVAISAITE,S.GRAZULIS,V.SIKSNYS REVDAT 5 10-JAN-24 5DWB 1 REMARK REVDAT 4 17-JUL-19 5DWB 1 REMARK DBREF REVDAT 3 03-MAY-17 5DWB 1 JRNL REVDAT 2 11-JAN-17 5DWB 1 JRNL REVDAT 1 28-SEP-16 5DWB 0 JRNL AUTH G.TAMULAITIENE,V.JOVAISAITE,G.TAMULAITIS,I.SONGAILIENE, JRNL AUTH 2 E.MANAKOVA,M.ZAREMBA,S.GRAZULIS,S.Y.XU,V.SIKSNYS JRNL TITL RESTRICTION ENDONUCLEASE AGEI IS A MONOMER WHICH DIMERIZES JRNL TITL 2 TO CLEAVE DNA. JRNL REF NUCLEIC ACIDS RES. V. 45 3547 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 28039325 JRNL DOI 10.1093/NAR/GKW1310 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.3 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.110 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 21116 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.240 REMARK 3 FREE R VALUE TEST SET COUNT : 2073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.4636 - 7.3981 0.96 1245 161 0.1329 0.1432 REMARK 3 2 7.3981 - 5.8961 0.99 1270 184 0.1468 0.1934 REMARK 3 3 5.8961 - 5.1578 1.00 1296 163 0.1491 0.1647 REMARK 3 4 5.1578 - 4.6895 0.99 1269 164 0.1334 0.1878 REMARK 3 5 4.6895 - 4.3551 0.99 1346 115 0.1270 0.1654 REMARK 3 6 4.3551 - 4.0995 0.99 1255 183 0.1380 0.1576 REMARK 3 7 4.0995 - 3.8949 0.99 1270 143 0.1444 0.1645 REMARK 3 8 3.8949 - 3.7259 0.99 1310 152 0.1565 0.1927 REMARK 3 9 3.7259 - 3.5829 0.98 1294 132 0.1622 0.2253 REMARK 3 10 3.5829 - 3.4596 0.99 1300 138 0.1584 0.2024 REMARK 3 11 3.4596 - 3.3516 0.98 1302 116 0.1937 0.2142 REMARK 3 12 3.3516 - 3.2560 0.98 1290 174 0.1849 0.2468 REMARK 3 13 3.2560 - 3.1705 0.98 1255 129 0.1871 0.2336 REMARK 3 14 3.1705 - 3.0932 0.97 1318 141 0.2137 0.2462 REMARK 3 15 3.0932 - 3.0230 0.95 1191 137 0.2130 0.2564 REMARK 3 16 3.0230 - 2.9588 0.94 1233 137 0.2149 0.2545 REMARK 3 17 2.9588 - 2.8997 0.93 1193 157 0.2268 0.3034 REMARK 3 18 2.8997 - 2.8451 0.93 1248 127 0.2171 0.2401 REMARK 3 19 2.8451 - 2.7943 0.90 1169 109 0.2258 0.2799 REMARK 3 20 2.7943 - 2.7470 0.90 1200 143 0.2361 0.2922 REMARK 3 21 2.7470 - 2.7027 0.88 1176 106 0.2232 0.2481 REMARK 3 22 2.7027 - 2.6612 0.87 1109 116 0.2298 0.2905 REMARK 3 23 2.6612 - 2.6221 0.85 1122 127 0.2096 0.2484 REMARK 3 24 2.6221 - 2.5852 0.85 1153 108 0.2216 0.2624 REMARK 3 25 2.5852 - 2.5503 0.85 1118 125 0.2416 0.3370 REMARK 3 26 2.5503 - 2.5172 0.83 1076 104 0.2332 0.3040 REMARK 3 27 2.5172 - 2.4858 0.84 1111 151 0.2201 0.2895 REMARK 3 28 2.4858 - 2.4558 0.84 1091 110 0.2262 0.2600 REMARK 3 29 2.4558 - 2.4273 0.82 1044 150 0.2408 0.3389 REMARK 3 30 2.4273 - 2.4001 0.83 1062 143 0.2921 0.2879 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4933 REMARK 3 ANGLE : 0.916 6796 REMARK 3 CHIRALITY : 0.037 748 REMARK 3 PLANARITY : 0.006 809 REMARK 3 DIHEDRAL : 17.671 1846 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 3.8750 0.5051 30.3085 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.1320 REMARK 3 T33: 0.0984 T12: -0.0125 REMARK 3 T13: 0.0089 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 0.2789 L22: 0.8675 REMARK 3 L33: 0.3897 L12: -0.0374 REMARK 3 L13: 0.1331 L23: 0.3113 REMARK 3 S TENSOR REMARK 3 S11: -0.0655 S12: -0.0960 S13: -0.0891 REMARK 3 S21: 0.0438 S22: 0.0413 S23: -0.0915 REMARK 3 S31: -0.0368 S32: -0.0387 S33: -0.0020 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 7.0335 -18.1928 4.0302 REMARK 3 T TENSOR REMARK 3 T11: 0.1923 T22: 0.1644 REMARK 3 T33: 0.1658 T12: 0.0458 REMARK 3 T13: -0.0221 T23: -0.0646 REMARK 3 L TENSOR REMARK 3 L11: 0.6702 L22: 0.9979 REMARK 3 L33: 0.5819 L12: -0.1311 REMARK 3 L13: -0.1087 L23: 0.5467 REMARK 3 S TENSOR REMARK 3 S11: 0.1840 S12: 0.2234 S13: -0.3316 REMARK 3 S21: -0.1917 S22: -0.2167 S23: -0.0084 REMARK 3 S31: -0.0671 S32: -0.0035 S33: -0.2394 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 0.6181 -9.1107 17.3901 REMARK 3 T TENSOR REMARK 3 T11: 0.1843 T22: 0.1429 REMARK 3 T33: 0.1274 T12: 0.0145 REMARK 3 T13: 0.0037 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 1.2318 L22: 0.1354 REMARK 3 L33: 0.4324 L12: 0.0184 REMARK 3 L13: 0.0066 L23: -0.0391 REMARK 3 S TENSOR REMARK 3 S11: 0.1632 S12: -0.0190 S13: -0.3333 REMARK 3 S21: -0.0868 S22: -0.1029 S23: -0.0132 REMARK 3 S31: -0.0935 S32: 0.0681 S33: 0.2123 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 1.1484 -7.8242 15.4104 REMARK 3 T TENSOR REMARK 3 T11: 0.1579 T22: 0.1759 REMARK 3 T33: 0.1756 T12: 0.0114 REMARK 3 T13: 0.0369 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 0.1600 L22: 0.0574 REMARK 3 L33: 0.1180 L12: -0.0216 REMARK 3 L13: 0.0075 L23: 0.0471 REMARK 3 S TENSOR REMARK 3 S11: -0.0124 S12: 0.0568 S13: -0.0107 REMARK 3 S21: -0.0922 S22: -0.1034 S23: 0.0177 REMARK 3 S31: -0.0234 S32: 0.0385 S33: -0.0293 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DWB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213875. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8150 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 6.2.6 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21165 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.744 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : 0.05600 REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.19800 REMARK 200 R SYM FOR SHELL (I) : 0.19800 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 6.0 REMARK 200 STARTING MODEL: 5DWA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION BUFFER WAS 0.2 M NACL, REMARK 280 0.1 M BIS-TRIS (PH 5.5), 19% PEG3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.54650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 9 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 40 CD CE NZ REMARK 470 ARG A 110 CD NE CZ NH1 NH2 REMARK 470 ASP A 134 CG OD1 OD2 REMARK 470 LYS A 140 CG CD CE NZ REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 ARG A 220 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 9 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 ARG B 220 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC D -1 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC D 7 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 9 32.25 -92.67 REMARK 500 VAL A 70 -68.97 -104.56 REMARK 500 LYS A 120 -103.57 53.44 REMARK 500 LYS A 140 35.50 -94.17 REMARK 500 ALA A 172 -131.25 48.78 REMARK 500 LYS A 200 112.02 -160.89 REMARK 500 GLN A 265 -91.08 -109.45 REMARK 500 VAL B 70 -68.95 -104.30 REMARK 500 LYS B 120 -101.60 51.85 REMARK 500 LYS B 140 36.15 -95.77 REMARK 500 ALA B 172 -133.72 47.96 REMARK 500 GLN B 265 -89.53 -110.75 REMARK 500 REMARK 500 REMARK: NULL DBREF 5DWB A 1 278 UNP Q9KHV6 T2A1_THAGE 1 278 DBREF 5DWB B 1 278 UNP Q9KHV6 T2A1_THAGE 1 278 DBREF 5DWB C -3 9 PDB 5DWB 5DWB -3 9 DBREF 5DWB D -3 9 PDB 5DWB 5DWB -3 9 SEQRES 1 A 278 MET ARG LEU ASP LEU ASP PHE GLY ARG GLY LEU VAL ALA SEQRES 2 A 278 HIS VAL MET LEU ASP ASN VAL SER GLU GLU GLN TYR GLN SEQRES 3 A 278 GLN ILE SER ASP TYR PHE VAL PRO LEU VAL ASN LYS PRO SEQRES 4 A 278 LYS LEU LYS SER ARG ASP ALA ILE GLY GLN ALA PHE VAL SEQRES 5 A 278 MET ALA THR GLU VAL CYS PRO ASP ALA ASN PRO SER ASP SEQRES 6 A 278 LEU TRP HIS HIS VAL LEU TYR ARG ILE TYR ILE ARG GLU SEQRES 7 A 278 LYS ILE GLY THR ASP PRO SER GLN SER TRP VAL ARG THR SEQRES 8 A 278 SER GLY GLU ALA PHE GLU VAL ALA LEU VAL GLU ARG TYR SEQRES 9 A 278 ASN PRO VAL LEU ALA ARG HIS GLY ILE ARG LEU THR ALA SEQRES 10 A 278 LEU PHE LYS GLY GLN LYS GLY LEU ALA LEU THR ARG MET SEQRES 11 A 278 GLY VAL ALA ASP ARG VAL GLY SER ARG LYS VAL ASP VAL SEQRES 12 A 278 MET ILE GLU LYS GLN GLY GLY GLY ARG SER PRO ASP ALA SEQRES 13 A 278 GLU GLY PHE GLY VAL VAL GLY GLY ILE HIS ALA LYS VAL SEQRES 14 A 278 SER LEU ALA GLU ARG VAL SER ASP ASP ILE PRO ALA SER SEQRES 15 A 278 ARG ILE MET MET GLY GLU GLY LEU LEU SER VAL LEU SER SEQRES 16 A 278 THR LEU ASP VAL LYS SER PHE PRO PRO PRO HIS GLY ASP SEQRES 17 A 278 LEU VAL ASN ARG GLY GLU LEU GLY THR PRO ASP ARG PRO SEQRES 18 A 278 SER ASP LYS ARG ASN TYR ILE GLU GLY HIS GLY ASP PHE SEQRES 19 A 278 SER ALA CYS PHE SER TYR ASN LEU ARG THR SER PRO SER SEQRES 20 A 278 ASN ALA THR THR PRO SER GLY ARG HIS ILE TYR VAL SER SEQRES 21 A 278 GLY PHE SER GLY GLN ASP ASP GLU PHE THR ASP TYR LEU SEQRES 22 A 278 VAL ALA GLN LEU ALA SEQRES 1 B 278 MET ARG LEU ASP LEU ASP PHE GLY ARG GLY LEU VAL ALA SEQRES 2 B 278 HIS VAL MET LEU ASP ASN VAL SER GLU GLU GLN TYR GLN SEQRES 3 B 278 GLN ILE SER ASP TYR PHE VAL PRO LEU VAL ASN LYS PRO SEQRES 4 B 278 LYS LEU LYS SER ARG ASP ALA ILE GLY GLN ALA PHE VAL SEQRES 5 B 278 MET ALA THR GLU VAL CYS PRO ASP ALA ASN PRO SER ASP SEQRES 6 B 278 LEU TRP HIS HIS VAL LEU TYR ARG ILE TYR ILE ARG GLU SEQRES 7 B 278 LYS ILE GLY THR ASP PRO SER GLN SER TRP VAL ARG THR SEQRES 8 B 278 SER GLY GLU ALA PHE GLU VAL ALA LEU VAL GLU ARG TYR SEQRES 9 B 278 ASN PRO VAL LEU ALA ARG HIS GLY ILE ARG LEU THR ALA SEQRES 10 B 278 LEU PHE LYS GLY GLN LYS GLY LEU ALA LEU THR ARG MET SEQRES 11 B 278 GLY VAL ALA ASP ARG VAL GLY SER ARG LYS VAL ASP VAL SEQRES 12 B 278 MET ILE GLU LYS GLN GLY GLY GLY ARG SER PRO ASP ALA SEQRES 13 B 278 GLU GLY PHE GLY VAL VAL GLY GLY ILE HIS ALA LYS VAL SEQRES 14 B 278 SER LEU ALA GLU ARG VAL SER ASP ASP ILE PRO ALA SER SEQRES 15 B 278 ARG ILE MET MET GLY GLU GLY LEU LEU SER VAL LEU SER SEQRES 16 B 278 THR LEU ASP VAL LYS SER PHE PRO PRO PRO HIS GLY ASP SEQRES 17 B 278 LEU VAL ASN ARG GLY GLU LEU GLY THR PRO ASP ARG PRO SEQRES 18 B 278 SER ASP LYS ARG ASN TYR ILE GLU GLY HIS GLY ASP PHE SEQRES 19 B 278 SER ALA CYS PHE SER TYR ASN LEU ARG THR SER PRO SER SEQRES 20 B 278 ASN ALA THR THR PRO SER GLY ARG HIS ILE TYR VAL SER SEQRES 21 B 278 GLY PHE SER GLY GLN ASP ASP GLU PHE THR ASP TYR LEU SEQRES 22 B 278 VAL ALA GLN LEU ALA SEQRES 1 C 13 DT DT DC DG DA DC DC DG DG DT DC DG DA SEQRES 1 D 13 DT DT DC DG DA DC DC DG DG DT DC DG DA FORMUL 5 HOH *175(H2 O) HELIX 1 AA1 SER A 21 ASN A 37 1 17 HELIX 2 AA2 LYS A 42 CYS A 58 1 17 HELIX 3 AA3 ASN A 62 HIS A 69 1 8 HELIX 4 AA4 VAL A 70 LYS A 79 1 10 HELIX 5 AA5 ASP A 83 ALA A 109 1 27 HELIX 6 AA6 GLY A 121 GLY A 131 1 11 HELIX 7 AA7 GLU A 173 ASP A 177 5 5 HELIX 8 AA8 ASP A 178 GLY A 187 1 10 HELIX 9 AA9 SER A 222 GLY A 230 1 9 HELIX 10 AB1 ASP A 267 ALA A 278 1 12 HELIX 11 AB2 SER B 21 ASN B 37 1 17 HELIX 12 AB3 LYS B 42 CYS B 58 1 17 HELIX 13 AB4 ASN B 62 HIS B 69 1 8 HELIX 14 AB5 VAL B 70 LYS B 79 1 10 HELIX 15 AB6 ASP B 83 ALA B 109 1 27 HELIX 16 AB7 GLY B 121 GLY B 131 1 11 HELIX 17 AB8 GLU B 173 SER B 176 5 4 HELIX 18 AB9 ASP B 177 GLY B 187 1 11 HELIX 19 AC1 SER B 222 GLY B 230 1 9 HELIX 20 AC2 ASP B 267 LEU B 277 1 11 SHEET 1 AA1 2 ARG A 2 ASP A 6 0 SHEET 2 AA1 2 VAL A 12 MET A 16 -1 O ALA A 13 N LEU A 5 SHEET 1 AA2 6 ILE A 113 ALA A 117 0 SHEET 2 AA2 6 VAL A 143 GLN A 148 -1 O GLU A 146 N ARG A 114 SHEET 3 AA2 6 PHE A 159 LYS A 168 -1 O ILE A 165 N VAL A 143 SHEET 4 AA2 6 LEU A 191 THR A 196 1 O VAL A 193 N HIS A 166 SHEET 5 AA2 6 ALA A 236 SER A 239 1 O PHE A 238 N THR A 196 SHEET 6 AA2 6 ILE A 257 VAL A 259 1 O TYR A 258 N CYS A 237 SHEET 1 AA3 2 ARG B 2 GLY B 8 0 SHEET 2 AA3 2 LEU B 11 MET B 16 -1 O ALA B 13 N LEU B 5 SHEET 1 AA4 6 ILE B 113 ALA B 117 0 SHEET 2 AA4 6 VAL B 143 GLN B 148 -1 O MET B 144 N THR B 116 SHEET 3 AA4 6 PHE B 159 LYS B 168 -1 O ILE B 165 N VAL B 143 SHEET 4 AA4 6 LEU B 191 THR B 196 1 O VAL B 193 N HIS B 166 SHEET 5 AA4 6 ALA B 236 SER B 239 1 O PHE B 238 N THR B 196 SHEET 6 AA4 6 ILE B 257 VAL B 259 1 O TYR B 258 N CYS B 237 CISPEP 1 PRO A 204 PRO A 205 0 0.50 CISPEP 2 PRO B 204 PRO B 205 0 0.50 CRYST1 50.587 87.093 66.521 90.00 99.82 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019768 0.000000 0.003422 0.00000 SCALE2 0.000000 0.011482 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015256 0.00000