data_5DWX # _entry.id 5DWX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5DWX pdb_00005dwx 10.2210/pdb5dwx/pdb WWPDB D_1000212366 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-20 2 'Structure model' 1 1 2016-02-10 3 'Structure model' 1 2 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.value' 8 3 'Structure model' '_struct_conn.pdbx_dist_value' 9 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 13 3 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5DWX _pdbx_database_status.recvd_initial_deposition_date 2015-09-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Quadruplex-Duplex construct with a different sequence' _pdbx_database_related.db_id 5DWW _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Parkinson, G.N.' 1 'Russo Krauss, I.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 138 _citation.language ? _citation.page_first 1226 _citation.page_last 1233 _citation.title ;Structural Insights into the Quadruplex-Duplex 3' Interface Formed from a Telomeric Repeat: A Potential Molecular Target. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.5b10492 _citation.pdbx_database_id_PubMed 26730610 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Russo Krauss, I.' 1 ? primary 'Ramaswamy, S.' 2 ? primary 'Neidle, S.' 3 ? primary 'Haider, S.' 4 ? primary 'Parkinson, G.N.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA (24-MER)' 7608.870 1 ? ? ? ? 2 polymer syn 'DNA complementary strand' 2410.618 1 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DC) (DG)(DT)(DT)(DA) ; GGGTGGGTGGGTGGGTTAGCGTTA A ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DA)(DC)(DG)(DC)(DT)(DA)' TAACGCTA B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'POTASSIUM ION' _pdbx_entity_nonpoly.comp_id K # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DT n 1 5 DG n 1 6 DG n 1 7 DG n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DG n 1 12 DT n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DT n 1 17 DT n 1 18 DA n 1 19 DG n 1 20 DC n 1 21 DG n 1 22 DT n 1 23 DT n 1 24 DA n 2 1 DT n 2 2 DA n 2 3 DA n 2 4 DC n 2 5 DG n 2 6 DC n 2 7 DT n 2 8 DA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 24 'synthetic construct' ? 32630 ? 2 1 sample 1 8 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DT 12 12 12 DT DT A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DT 16 16 16 DT DT A . n A 1 17 DT 17 17 17 DT DT A . n A 1 18 DA 18 18 18 DA DA A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DC 20 20 20 DC DC A . n A 1 21 DG 21 21 ? ? ? A . n A 1 22 DT 22 22 ? ? ? A . n A 1 23 DT 23 23 ? ? ? A . n A 1 24 DA 24 24 ? ? ? A . n B 2 1 DT 1 1 ? ? ? B . n B 2 2 DA 2 2 ? ? ? B . n B 2 3 DA 3 3 ? ? ? B . n B 2 4 DC 4 4 ? ? ? B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DA 8 8 8 DA DA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K 1 101 1 K K A . D 3 K 1 102 2 K K A . E 3 K 1 103 3 K K A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B DG 5 ? P ? B DG 5 P 2 1 Y 1 B DG 5 ? OP1 ? B DG 5 OP1 3 1 Y 1 B DG 5 ? OP2 ? B DG 5 OP2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5DWX _cell.details ? _cell.formula_units_Z ? _cell.length_a 59.830 _cell.length_a_esd ? _cell.length_b 59.830 _cell.length_b_esd ? _cell.length_c 72.310 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5DWX _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 285 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2 M lithium sulphate, 50 mM Tris/HCl pH 8.8 2 mM CuCl2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2011-12-15 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5DWX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.71 _reflns.d_resolution_low 42.31 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3820 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.6 _reflns.pdbx_Rmerge_I_obs 0.134 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.71 _reflns_shell.d_res_low 2.78 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 97.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.93 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] 0.14 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -0.28 _refine.B_iso_max ? _refine.B_iso_mean 52.180 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.908 _refine.correlation_coeff_Fo_to_Fc_free 0.864 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5DWX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.71 _refine.ls_d_res_low 20.00 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3632 _refine.ls_number_reflns_R_free 170 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.61 _refine.ls_percent_reflns_R_free 4.5 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.28669 _refine.ls_R_factor_R_free 0.32705 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.28462 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1KF1 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.442 _refine.pdbx_overall_ESU_R_Free 0.338 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 11.596 _refine.overall_SU_ML 0.238 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 502 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 505 _refine_hist.d_res_high 2.71 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.011 564 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 272 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.285 1.140 872 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 2.338 3.000 644 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.222 0.200 72 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.025 0.020 300 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 116 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 6.668 5.291 564 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.662 5.293 565 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.869 7.900 873 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 15.390 47.545 2414 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 15.392 47.571 2413 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.711 _refine_ls_shell.d_res_low 2.780 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 10 _refine_ls_shell.number_reflns_R_work 249 _refine_ls_shell.percent_reflns_obs 96.64 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.306 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.363 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5DWX _struct.title ;Structural Insights into the Quadruplex-Duplex 3' Interface formed from a Telomeric Repeat - TLOOP ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5DWX _struct_keywords.text 'Telomere, Quadruplex, Junction, Duplex, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5DWX 5DWX ? 1 ? 1 2 PDB 5DWX 5DWX ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5DWX A 1 ? 24 ? 5DWX 1 ? 24 ? 1 24 2 2 5DWX B 1 ? 8 ? 5DWX 1 ? 8 ? 1 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1260 ? 1 MORE 2 ? 1 'SSA (A^2)' 4350 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 D K . K ? ? A DG 1 A K 102 1_555 ? ? ? ? ? ? ? 2.632 ? ? metalc2 metalc ? ? A DG 1 O6 ? ? ? 1_555 E K . K ? ? A DG 1 A K 103 1_555 ? ? ? ? ? ? ? 3.019 ? ? metalc3 metalc ? ? A DG 1 O6 ? ? ? 1_555 E K . K ? ? A DG 1 A K 103 7_555 ? ? ? ? ? ? ? 3.019 ? ? metalc4 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? A DG 2 A K 101 1_555 ? ? ? ? ? ? ? 2.777 ? ? metalc5 metalc ? ? A DG 2 O6 ? ? ? 1_555 D K . K ? ? A DG 2 A K 102 1_555 ? ? ? ? ? ? ? 2.875 ? ? metalc6 metalc ? ? A DG 3 O6 ? ? ? 1_555 C K . K ? ? A DG 3 A K 101 1_555 ? ? ? ? ? ? ? 2.763 ? ? metalc7 metalc ? ? A DG 5 O6 ? ? ? 1_555 D K . K ? ? A DG 5 A K 102 1_555 ? ? ? ? ? ? ? 3.016 ? ? metalc8 metalc ? ? A DG 5 O6 ? ? ? 1_555 E K . K ? ? A DG 5 A K 103 1_555 ? ? ? ? ? ? ? 2.489 ? ? metalc9 metalc ? ? A DG 5 O6 ? ? ? 1_555 E K . K ? ? A DG 5 A K 103 7_555 ? ? ? ? ? ? ? 2.489 ? ? metalc10 metalc ? ? A DG 6 O6 ? ? ? 1_555 C K . K ? ? A DG 6 A K 101 1_555 ? ? ? ? ? ? ? 3.013 ? ? metalc11 metalc ? ? A DG 6 O6 ? ? ? 1_555 D K . K ? ? A DG 6 A K 102 1_555 ? ? ? ? ? ? ? 2.697 ? ? metalc12 metalc ? ? A DG 7 O6 ? ? ? 1_555 C K . K ? ? A DG 7 A K 101 1_555 ? ? ? ? ? ? ? 2.659 ? ? metalc13 metalc ? ? A DG 9 O6 ? ? ? 1_555 D K . K ? ? A DG 9 A K 102 1_555 ? ? ? ? ? ? ? 2.932 ? ? metalc14 metalc ? ? A DG 9 O6 ? ? ? 1_555 E K . K ? ? A DG 9 A K 103 1_555 ? ? ? ? ? ? ? 2.691 ? ? metalc15 metalc ? ? A DG 9 O6 ? ? ? 1_555 E K . K ? ? A DG 9 A K 103 7_555 ? ? ? ? ? ? ? 2.691 ? ? metalc16 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 101 1_555 ? ? ? ? ? ? ? 2.890 ? ? metalc17 metalc ? ? A DG 10 O6 ? ? ? 1_555 D K . K ? ? A DG 10 A K 102 1_555 ? ? ? ? ? ? ? 2.565 ? ? metalc18 metalc ? ? A DG 11 O6 ? ? ? 1_555 C K . K ? ? A DG 11 A K 101 1_555 ? ? ? ? ? ? ? 2.677 ? ? metalc19 metalc ? ? A DG 13 O6 ? ? ? 1_555 D K . K ? ? A DG 13 A K 102 1_555 ? ? ? ? ? ? ? 2.835 ? ? metalc20 metalc ? ? A DG 13 O6 ? ? ? 1_555 E K . K ? ? A DG 13 A K 103 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc21 metalc ? ? A DG 13 O6 ? ? ? 1_555 E K . K ? ? A DG 13 A K 103 7_555 ? ? ? ? ? ? ? 2.856 ? ? metalc22 metalc ? ? A DG 14 O6 ? ? ? 1_555 C K . K ? ? A DG 14 A K 101 1_555 ? ? ? ? ? ? ? 2.839 ? ? metalc23 metalc ? ? A DG 14 O6 ? ? ? 1_555 D K . K ? ? A DG 14 A K 102 1_555 ? ? ? ? ? ? ? 2.621 ? ? metalc24 metalc ? ? A DG 15 O6 ? ? ? 1_555 C K . K ? ? A DG 15 A K 101 1_555 ? ? ? ? ? ? ? 2.760 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG 5 O6 ? ? A DG 1 A DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 5 N7 ? ? A DG 1 A DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG 13 N2 ? ? A DG 1 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG 13 N1 ? ? A DG 1 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 14 N2 ? ? A DG 2 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 14 N1 ? ? A DG 2 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 7 O6 ? ? A DG 3 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 7 N7 ? ? A DG 3 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 15 N2 ? ? A DG 3 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 15 N1 ? ? A DG 3 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 1 N2 ? ? A DG 5 A DG 1 7_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 1 N1 ? ? A DG 5 A DG 1 7_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 7 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 7 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 9 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 9 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 10 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 10 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 11 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 11 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 13 A DG 9 7_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 13 A DG 9 7_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DT 17 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 17 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 17 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 17 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 7 O2 ? ? A DA 18 B DT 7 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog32 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 19 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 19 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 19 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 20 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 20 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 20 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 20 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 20 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 20 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 74.8 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 71.8 ? 3 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 102.6 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 129.9 ? 5 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 72.1 ? 6 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 79.9 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 108.0 ? 8 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 160.0 ? 9 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 61.3 ? 10 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 92.5 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 150.3 ? 12 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 107.8 ? 13 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 133.2 ? 14 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 76.7 ? 15 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 79.8 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 70.3 ? 17 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 130.5 ? 18 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 98.7 ? 19 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 156.3 ? 20 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 66.9 ? 21 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 87.9 ? 22 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 85.5 ? 23 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 65.6 ? 24 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 156.8 ? 25 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 112.7 ? 26 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 133.7 ? 27 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 69.9 ? 28 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 77.6 ? 29 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 1 ? A DG 1 ? 1_555 0.0 ? 30 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 73.6 ? 31 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 73.6 ? 32 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 73.6 ? 33 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 73.6 ? 34 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 0.0 ? 35 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 104.0 ? 36 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 104.0 ? 37 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 71.5 ? 38 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 71.5 ? 39 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 104.0 ? 40 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 104.0 ? 41 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 71.5 ? 42 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 71.5 ? 43 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 0.0 ? 44 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 64.8 ? 45 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 64.8 ? 46 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 112.2 ? 47 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 112.2 ? 48 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 69.9 ? 49 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 69.9 ? 50 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 64.8 ? 51 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 64.8 ? 52 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 112.2 ? 53 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 112.2 ? 54 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 69.9 ? 55 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 69.9 ? 56 O6 ? A DG 13 ? A DG 13 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 13 ? A DG 13 ? 1_555 0.0 ? 57 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 65.5 ? 58 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 68.9 ? 59 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 85.8 ? 60 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 130.5 ? 61 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 79.6 ? 62 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 74.7 ? 63 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 101.8 ? 64 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 152.9 ? 65 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 67.1 ? 66 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 93.6 ? 67 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 156.7 ? 68 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 124.3 ? 69 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 129.1 ? 70 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 72.5 ? 71 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 77.2 ? 72 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 64.2 ? 73 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 123.8 ? 74 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 98.3 ? 75 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 155.5 ? 76 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 62.5 ? 77 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 95.9 ? 78 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 84.4 ? 79 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 82.4 ? 80 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 153.3 ? 81 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 125.9 ? 82 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 121.6 ? 83 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 76.9 ? 84 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 69.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 101 ? 9 'binding site for residue K A 101' AC2 Software A K 102 ? 11 'binding site for residue K A 102' AC3 Software A K 103 ? 10 'binding site for residue K A 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DG A 2 ? DG A 2 . ? 1_555 ? 2 AC1 9 DG A 3 ? DG A 3 . ? 1_555 ? 3 AC1 9 DG A 6 ? DG A 6 . ? 1_555 ? 4 AC1 9 DG A 7 ? DG A 7 . ? 1_555 ? 5 AC1 9 DG A 10 ? DG A 10 . ? 1_555 ? 6 AC1 9 DG A 11 ? DG A 11 . ? 1_555 ? 7 AC1 9 DG A 14 ? DG A 14 . ? 1_555 ? 8 AC1 9 DG A 15 ? DG A 15 . ? 1_555 ? 9 AC1 9 K D . ? K A 102 . ? 1_555 ? 10 AC2 11 DG A 1 ? DG A 1 . ? 1_555 ? 11 AC2 11 DG A 2 ? DG A 2 . ? 1_555 ? 12 AC2 11 DG A 5 ? DG A 5 . ? 1_555 ? 13 AC2 11 DG A 6 ? DG A 6 . ? 1_555 ? 14 AC2 11 DG A 9 ? DG A 9 . ? 1_555 ? 15 AC2 11 DG A 10 ? DG A 10 . ? 1_555 ? 16 AC2 11 DG A 13 ? DG A 13 . ? 1_555 ? 17 AC2 11 DG A 14 ? DG A 14 . ? 1_555 ? 18 AC2 11 K C . ? K A 101 . ? 1_555 ? 19 AC2 11 K E . ? K A 103 . ? 7_555 ? 20 AC2 11 K E . ? K A 103 . ? 1_555 ? 21 AC3 10 DG A 1 ? DG A 1 . ? 1_555 ? 22 AC3 10 DG A 1 ? DG A 1 . ? 7_555 ? 23 AC3 10 DG A 5 ? DG A 5 . ? 7_555 ? 24 AC3 10 DG A 5 ? DG A 5 . ? 1_555 ? 25 AC3 10 DG A 9 ? DG A 9 . ? 7_555 ? 26 AC3 10 DG A 9 ? DG A 9 . ? 1_555 ? 27 AC3 10 DG A 13 ? DG A 13 . ? 7_555 ? 28 AC3 10 DG A 13 ? DG A 13 . ? 1_555 ? 29 AC3 10 K D . ? K A 102 . ? 7_555 ? 30 AC3 10 K D . ? K A 102 . ? 1_555 ? # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id K _pdbx_struct_special_symmetry.auth_seq_id 103 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id K _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A DG 21 ? A DG 21 2 1 Y 1 A DT 22 ? A DT 22 3 1 Y 1 A DT 23 ? A DT 23 4 1 Y 1 A DA 24 ? A DA 24 5 1 Y 1 B DT 1 ? B DT 1 6 1 Y 1 B DA 2 ? B DA 2 7 1 Y 1 B DA 3 ? B DA 3 8 1 Y 1 B DC 4 ? B DC 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 K K K N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5DWX 'double helix' 5DWX 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 5 1_555 A DG 9 1_555 1.372 3.505 -0.231 9.788 -4.101 -90.341 1 A_DG5:DG9_A A 5 ? A 9 ? 6 3 1 A DG 6 1_555 A DG 10 1_555 1.543 3.701 -0.183 3.633 -6.351 -89.274 2 A_DG6:DG10_A A 6 ? A 10 ? 6 3 1 A DG 2 1_555 A DG 14 1_555 -1.388 -3.322 0.143 8.748 1.419 90.864 3 A_DG2:DG14_A A 2 ? A 14 ? 6 3 1 A DG 1 1_555 A DG 13 1_555 -1.483 -3.525 0.234 4.753 -2.633 90.334 4 A_DG1:DG13_A A 1 ? A 13 ? 6 3 1 A DG 11 1_555 A DG 15 1_555 1.896 3.007 0.200 6.849 -7.307 -88.779 5 A_DG11:DG15_A A 11 ? A 15 ? 6 3 1 B DT 7 1_555 A DA 18 1_555 1.059 1.418 -0.246 -4.667 17.419 -99.806 6 B_DT7:DA18_A B 7 ? A 18 ? ? ? 1 B DA 8 1_555 A DT 17 1_555 -0.313 -0.470 0.340 -16.280 -12.552 11.116 7 B_DA8:DT17_A B 8 ? A 17 ? 20 1 1 A DG 19 1_555 B DC 6 1_555 -0.109 -0.096 -0.399 -17.965 2.200 3.468 8 A_DG19:DC6_B A 19 ? B 6 ? 19 1 1 A DC 20 1_555 B DG 5 1_555 -0.303 -0.263 -0.680 7.143 -12.592 5.778 9 A_DC20:DG5_B A 20 ? B 5 ? 19 1 1 A DG 1 1_555 A DG 5 7_555 1.489 3.629 0.777 -0.545 -9.275 -89.684 10 A_DG1:DG5_A A 1 ? A 5 ? 6 3 1 A DG 13 1_555 A DG 9 7_555 -1.538 -3.502 0.344 -6.183 -5.263 89.490 11 A_DG13:DG9_A A 13 ? A 9 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 5 1_555 A DG 9 1_555 A DG 6 1_555 A DG 10 1_555 -0.410 -0.704 3.342 -0.762 -1.820 29.956 -0.975 0.629 3.387 -3.516 1.472 30.019 1 AA_DG5DG6:DG10DG9_AA A 5 ? A 9 ? A 6 ? A 10 ? 1 A DG 6 1_555 A DG 10 1_555 A DG 2 1_555 A DG 14 1_555 -1.476 -3.503 0.111 -2.865 8.566 179.996 -1.751 0.738 0.111 4.283 1.432 179.996 2 AA_DG6DG2:DG14DG10_AA A 6 ? A 10 ? A 2 ? A 14 ? 1 A DG 2 1_555 A DG 14 1_555 A DG 1 1_555 A DG 13 1_555 0.490 0.892 -3.170 -5.629 -4.600 -29.949 -2.519 1.950 -2.867 8.740 -10.694 -30.799 3 AA_DG2DG1:DG13DG14_AA A 2 ? A 14 ? A 1 ? A 13 ? 1 A DG 11 1_555 A DG 15 1_555 B DT 7 1_555 A DA 18 1_555 -1.153 2.459 2.889 134.375 96.738 39.428 0.341 1.826 1.453 51.155 -71.057 166.424 4 AB_DG11DT7:DA18DG15_AA A 11 ? A 15 ? B 7 ? A 18 ? 1 B DT 7 1_555 A DA 18 1_555 B DA 8 1_555 A DT 17 1_555 -0.254 -0.369 -3.733 13.791 8.582 -19.010 3.679 -5.128 -2.588 -21.573 34.669 -24.956 5 BB_DT7DA8:DT17DA18_AA B 7 ? A 18 ? B 8 ? A 17 ? 1 B DA 8 1_555 A DT 17 1_555 A DG 19 1_555 B DC 6 1_555 2.297 2.758 -1.271 -138.771 111.051 -107.042 -1.147 1.438 -0.980 -55.664 -69.559 -178.653 6 BA_DA8DG19:DC6DT17_BA B 8 ? A 17 ? A 19 ? B 6 ? 1 A DG 19 1_555 B DC 6 1_555 A DC 20 1_555 B DG 5 1_555 -0.689 0.547 2.776 3.433 2.902 29.006 0.551 1.985 2.719 5.750 -6.802 29.345 7 AA_DG19DC20:DG5DC6_BB A 19 ? B 6 ? A 20 ? B 5 ? 1 A DG 1 1_555 A DG 5 7_555 A DG 13 1_555 A DG 9 7_555 1.422 3.519 -0.003 2.521 -0.729 -179.877 -1.759 0.711 -0.003 0.364 1.260 -179.877 8 AA_DG1DG13:DG9DG5_AA A 1 ? A 5 ? A 13 ? A 9 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KF1 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5DWX _atom_sites.fract_transf_matrix[1][1] 0.016714 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016714 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013829 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O P # loop_