HEADER HORMONE RECEPTOR/PEPTIDE 23-SEP-15 5DX3 TITLE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN Y537S MUTANT IN COMPLEX TITLE 2 WITH STAPLED PEPTIDE SRC2-P3 AND ESTRADIOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 5 GROUP A MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ESTROGEN RECEPTOR; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 12 GROUP A MEMBER 1; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: STAPLED PEPTIDE SRC2-P3; COMPND 17 CHAIN: C, D; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: ESR1, ESR, NR3A1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606 KEYWDS SYNTHETIC PEPTIDE, STAPLED PEPTIDE, ESTROGEN RECEPTOR ALPHA, SOMATIC KEYWDS 2 MUTATION, PEPTIDE MIMETIC, AF-2 BINDING, HORMONE RECEPTOR-PEPTIDE KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.E.SPELTZ,S.W.FANNING,C.G.MAYNE,E.TAJKHORSHID,G.L.GREENE,T.W.MOORE REVDAT 5 15-NOV-23 5DX3 1 REMARK LINK ATOM REVDAT 4 19-FEB-20 5DX3 1 REMARK REVDAT 3 27-NOV-19 5DX3 1 REMARK REVDAT 2 06-SEP-17 5DX3 1 JRNL REMARK REVDAT 1 20-JUL-16 5DX3 0 JRNL AUTH T.E.SPELTZ,S.W.FANNING,C.G.MAYNE,C.FOWLER,E.TAJKHORSHID, JRNL AUTH 2 G.L.GREENE,T.W.MOORE JRNL TITL STAPLED PEPTIDES WITH GAMMA-METHYLATED HYDROCARBON CHAINS JRNL TITL 2 FOR THE ESTROGEN RECEPTOR/COACTIVATOR INTERACTION. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 55 4252 2016 JRNL REFN ESSN 1521-3773 JRNL PMID 26928945 JRNL DOI 10.1002/ANIE.201510557 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 29873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1447 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.5385 - 4.4969 0.97 2942 144 0.1700 0.2133 REMARK 3 2 4.4969 - 3.5721 0.99 2972 136 0.1687 0.2032 REMARK 3 3 3.5721 - 3.1214 0.99 2908 156 0.2012 0.2711 REMARK 3 4 3.1214 - 2.8363 0.99 2958 148 0.2128 0.2466 REMARK 3 5 2.8363 - 2.6332 0.99 2943 151 0.2217 0.2723 REMARK 3 6 2.6332 - 2.4781 0.99 2906 153 0.2206 0.2810 REMARK 3 7 2.4781 - 2.3541 0.99 2923 146 0.2265 0.2508 REMARK 3 8 2.3541 - 2.2517 0.95 2798 165 0.3129 0.3471 REMARK 3 9 2.2517 - 2.1650 0.87 2584 128 0.3982 0.4591 REMARK 3 10 2.1650 - 2.0903 0.84 2492 120 0.2607 0.2832 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3906 REMARK 3 ANGLE : 1.537 5293 REMARK 3 CHIRALITY : 0.064 632 REMARK 3 PLANARITY : 0.006 650 REMARK 3 DIHEDRAL : 16.007 1504 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 48.4109 2.2431 72.5397 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.1321 REMARK 3 T33: 0.1914 T12: -0.0103 REMARK 3 T13: -0.0095 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.0752 L22: 1.0179 REMARK 3 L33: 1.4053 L12: -0.0703 REMARK 3 L13: -0.5118 L23: -0.1489 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: -0.0876 S13: -0.0512 REMARK 3 S21: 0.1439 S22: 0.0057 S23: -0.0049 REMARK 3 S31: -0.0261 S32: 0.0070 S33: 0.0147 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5DX3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000213966. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29884 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 26.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3,350, 200 MM MGCL2, 100 MM REMARK 280 TRIS PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.92550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 294 REMARK 465 ASP A 295 REMARK 465 PRO A 296 REMARK 465 MET A 297 REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 ASN A 304 REMARK 465 SER A 305 REMARK 465 LEU A 306 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 LEU A 469 REMARK 465 GLU A 470 REMARK 465 GLU A 471 REMARK 465 ARG A 548 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 MET B 294 REMARK 465 ASP B 295 REMARK 465 PRO B 296 REMARK 465 MET B 297 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 SER B 305 REMARK 465 LEU B 306 REMARK 465 ALA B 307 REMARK 465 TYR B 331 REMARK 465 ASP B 332 REMARK 465 PRO B 333 REMARK 465 THR B 334 REMARK 465 ARG B 335 REMARK 465 PRO B 336 REMARK 465 VAL B 458 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 LYS B 467 REMARK 465 SER B 468 REMARK 465 LEU B 469 REMARK 465 GLU B 470 REMARK 465 GLU B 471 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 321 CG OD1 OD2 REMARK 470 ARG A 335 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 397 CG CD OE1 OE2 REMARK 470 GLU A 419 CG CD OE1 OE2 REMARK 470 GLU A 423 CG CD OE1 OE2 REMARK 470 PHE A 461 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 523 CG CD OE1 OE2 REMARK 470 GLU B 330 CG CD OE1 OE2 REMARK 470 PHE B 337 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 397 CG CD OE1 OE2 REMARK 470 ASP B 411 CG OD1 OD2 REMARK 470 LYS B 416 CG CD CE NZ REMARK 470 MET B 417 CG SD CE REMARK 470 TYR B 459 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B 461 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 477 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 531 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 329 CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 353 O3 EST A 601 1.80 REMARK 500 CE LYS B 362 O LEU D 9 1.80 REMARK 500 O ASP D 11 N NH2 D 13 2.10 REMARK 500 ND1 HIS A 501 O HOH A 701 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE21 GLN C 10 O HOH A 717 2857 1.52 REMARK 500 O HOH A 786 O HOH B 1121 1554 2.05 REMARK 500 ND2 ASN A 359 OH TYR B 328 1554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 353 CG GLU A 353 CD 0.091 REMARK 500 LYS B 362 CD LYS B 362 CE 0.202 REMARK 500 HIS C 6 NE2 HIS C 6 CD2 -0.076 REMARK 500 LEU D 5 CA LEU D 5 C -0.195 REMARK 500 ARG D 7 CA ARG D 7 C -0.159 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 310 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 LYS B 362 CD - CE - NZ ANGL. DEV. = -19.4 DEGREES REMARK 500 ASP C 11 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG D 7 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 397 37.06 -97.33 REMARK 500 TYR A 459 34.78 -89.98 REMARK 500 THR A 460 23.05 -143.62 REMARK 500 ASN B 532 14.50 59.58 REMARK 500 GLN D 10 -85.85 -86.71 REMARK 500 ASP D 11 72.62 39.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1149 DISTANCE = 5.86 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EST A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EST B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand NH2 C 13 bound to SER C REMARK 800 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand NH2 D 13 bound to SER D REMARK 800 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE D 1 and HIS D 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS D 3 and 5GM D 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 5GM D 4 and LEU D 5 DBREF 5DX3 A 297 554 UNP P03372 ESR1_HUMAN 297 554 DBREF 5DX3 B 297 554 UNP P03372 ESR1_HUMAN 297 554 DBREF 5DX3 C 2 12 UNP Q15596 NCOA2_HUMAN 687 697 DBREF 5DX3 D 2 12 UNP Q15596 NCOA2_HUMAN 687 697 SEQADV 5DX3 MET A 294 UNP P03372 INITIATING METHIONINE SEQADV 5DX3 ASP A 295 UNP P03372 EXPRESSION TAG SEQADV 5DX3 PRO A 296 UNP P03372 EXPRESSION TAG SEQADV 5DX3 SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 5DX3 MET B 294 UNP P03372 INITIATING METHIONINE SEQADV 5DX3 ASP B 295 UNP P03372 EXPRESSION TAG SEQADV 5DX3 PRO B 296 UNP P03372 EXPRESSION TAG SEQADV 5DX3 MET B 417 UNP P03372 CYS 417 CONFLICT SEQADV 5DX3 SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 5DX3 ACE C 1 UNP Q15596 EXPRESSION TAG SEQADV 5DX3 5GM C 4 UNP Q15596 ILE 689 CONFLICT SEQADV 5DX3 NH2 C 13 UNP Q15596 EXPRESSION TAG SEQADV 5DX3 ACE D 1 UNP Q15596 EXPRESSION TAG SEQADV 5DX3 5GM D 4 UNP Q15596 ILE 689 CONFLICT SEQADV 5DX3 NH2 D 13 UNP Q15596 EXPRESSION TAG SEQRES 1 A 261 MET ASP PRO MET ILE LYS ARG SER LYS LYS ASN SER LEU SEQRES 2 A 261 ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA LEU SEQRES 3 A 261 LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR ASP SEQRES 4 A 261 PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY LEU SEQRES 5 A 261 LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET ILE SEQRES 6 A 261 ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU THR SEQRES 7 A 261 LEU HIS ASP GLN VAL HIS LEU LEU GLU CYS ALA TRP LEU SEQRES 8 A 261 GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET GLU SEQRES 9 A 261 HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU LEU SEQRES 10 A 261 ASP ARG ASN GLN GLY LYS CYS VAL GLU GLY MET VAL GLU SEQRES 11 A 261 ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE ARG SEQRES 12 A 261 MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU LYS SEQRES 13 A 261 SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE LEU SEQRES 14 A 261 SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS ILE SEQRES 15 A 261 HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE HIS SEQRES 16 A 261 LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN HIS SEQRES 17 A 261 GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS ILE SEQRES 18 A 261 ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR SER SEQRES 19 A 261 MET LYS CYS LYS ASN VAL VAL PRO LEU SER ASP LEU LEU SEQRES 20 A 261 LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO THR SEQRES 21 A 261 SER SEQRES 1 B 261 MET ASP PRO MET ILE LYS ARG SER LYS LYS ASN SER LEU SEQRES 2 B 261 ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA LEU SEQRES 3 B 261 LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR ASP SEQRES 4 B 261 PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY LEU SEQRES 5 B 261 LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET ILE SEQRES 6 B 261 ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU THR SEQRES 7 B 261 LEU HIS ASP GLN VAL HIS LEU LEU GLU CYS ALA TRP LEU SEQRES 8 B 261 GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET GLU SEQRES 9 B 261 HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU LEU SEQRES 10 B 261 ASP ARG ASN GLN GLY LYS MET VAL GLU GLY MET VAL GLU SEQRES 11 B 261 ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE ARG SEQRES 12 B 261 MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU LYS SEQRES 13 B 261 SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE LEU SEQRES 14 B 261 SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS ILE SEQRES 15 B 261 HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE HIS SEQRES 16 B 261 LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN HIS SEQRES 17 B 261 GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS ILE SEQRES 18 B 261 ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR SER SEQRES 19 B 261 MET LYS CYS LYS ASN VAL VAL PRO LEU SER ASP LEU LEU SEQRES 20 B 261 LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO THR SEQRES 21 B 261 SER SEQRES 1 C 13 ACE HIS LYS 5GM LEU HIS ARG MK8 LEU GLN ASP SER NH2 SEQRES 1 D 13 ACE HIS LYS 5GM LEU HIS ARG MK8 LEU GLN ASP SER NH2 MODRES 5DX3 MK8 C 8 LEU MODIFIED RESIDUE MODRES 5DX3 MK8 D 8 LEU MODIFIED RESIDUE HET ACE C 1 6 HET 5GM C 4 23 HET MK8 C 8 20 HET NH2 C 13 3 HET ACE D 1 6 HET 5GM D 4 23 HET MK8 D 8 20 HET NH2 D 13 3 HET EST A 601 20 HET CL A 602 1 HET EST B1000 20 HETNAM ACE ACETYL GROUP HETNAM 5GM (4S)-2,4-DIMETHYL-L-NORLEUCINE HETNAM MK8 2-METHYL-L-NORLEUCINE HETNAM NH2 AMINO GROUP HETNAM EST ESTRADIOL HETNAM CL CHLORIDE ION FORMUL 3 ACE 2(C2 H4 O) FORMUL 3 5GM 2(C8 H17 N O2) FORMUL 3 MK8 2(C7 H15 N O2) FORMUL 3 NH2 2(H2 N) FORMUL 5 EST 2(C18 H24 O2) FORMUL 6 CL CL 1- FORMUL 8 HOH *140(H2 O) HELIX 1 AA1 THR A 311 ALA A 322 1 12 HELIX 2 AA2 SER A 338 LYS A 362 1 25 HELIX 3 AA3 GLY A 366 LEU A 370 5 5 HELIX 4 AA4 THR A 371 MET A 396 1 26 HELIX 5 AA5 ARG A 412 LYS A 416 1 5 HELIX 6 AA6 MET A 421 MET A 438 1 18 HELIX 7 AA7 GLN A 441 SER A 456 1 16 HELIX 8 AA8 GLY A 457 PHE A 461 5 5 HELIX 9 AA9 ASP A 473 ALA A 493 1 21 HELIX 10 AB1 THR A 496 LYS A 531 1 36 HELIX 11 AB2 SER A 537 ALA A 546 1 10 HELIX 12 AB3 THR B 311 GLU B 323 1 13 HELIX 13 AB4 SER B 338 LYS B 362 1 25 HELIX 14 AB5 GLY B 366 LEU B 370 5 5 HELIX 15 AB6 THR B 371 MET B 396 1 26 HELIX 16 AB7 ASN B 413 VAL B 418 5 6 HELIX 17 AB8 MET B 421 ASN B 439 1 19 HELIX 18 AB9 GLN B 441 SER B 456 1 16 HELIX 19 AC1 ASP B 473 ALA B 493 1 21 HELIX 20 AC2 THR B 496 CYS B 530 1 35 HELIX 21 AC3 SER B 537 HIS B 547 1 11 HELIX 22 AC4 LYS C 3 LEU C 9 1 7 HELIX 23 AC5 LYS D 3 LEU D 9 1 7 SHEET 1 AA1 2 LYS A 401 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 LINK C ACE C 1 N HIS C 2 1555 1555 1.35 LINK C LYS C 3 N 5GM C 4 1555 1555 1.31 LINK C 5GM C 4 N LEU C 5 1555 1555 1.36 LINK CE 5GM C 4 CE MK8 C 8 1555 1555 1.36 LINK C ARG C 7 N MK8 C 8 1555 1555 1.37 LINK C MK8 C 8 N LEU C 9 1555 1555 1.32 LINK C SER C 12 N NH2 C 13 1555 1555 1.31 LINK C ACE D 1 N HIS D 2 1555 1555 1.32 LINK C LYS D 3 N 5GM D 4 1555 1555 1.28 LINK C 5GM D 4 N LEU D 5 1555 1555 1.39 LINK CE 5GM D 4 CE MK8 D 8 1555 1555 1.37 LINK C ARG D 7 N MK8 D 8 1555 1555 1.39 LINK C MK8 D 8 N LEU D 9 1555 1555 1.33 LINK C SER D 12 N NH2 D 13 1555 1555 1.32 SITE 1 AC1 6 MET A 343 LEU A 346 GLU A 353 ARG A 394 SITE 2 AC1 6 HIS A 524 LEU A 525 SITE 1 AC2 3 ARG A 352 ARG B 352 HOH B1138 SITE 1 AC3 7 GLU B 353 LEU B 387 ARG B 394 PHE B 404 SITE 2 AC3 7 MET B 421 HIS B 524 HOH B1114 SITE 1 AC4 1 SER C 12 SITE 1 AC5 2 ASP D 11 SER D 12 SITE 1 AC6 2 LYS D 3 5GM D 4 SITE 1 AC7 8 VAL B 376 GLU B 380 LEU B 539 HIS D 2 SITE 2 AC7 8 LEU D 5 HIS D 6 ARG D 7 MK8 D 8 SITE 1 AC8 9 ILE B 358 LEU B 539 MET B 543 HIS D 2 SITE 2 AC8 9 LYS D 3 HIS D 6 ARG D 7 MK8 D 8 SITE 3 AC8 9 LEU D 9 CRYST1 56.162 85.851 58.764 90.00 109.09 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017806 0.000000 0.006163 0.00000 SCALE2 0.000000 0.011648 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018008 0.00000