data_5DYS
#
_entry.id 5DYS
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.397
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 5DYS pdb_00005dys 10.2210/pdb5dys/pdb
WWPDB D_1000214027 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2016-08-10
2 'Structure model' 1 1 2016-10-19
3 'Structure model' 2 0 2020-07-29
4 'Structure model' 2 1 2024-01-10
5 'Structure model' 2 2 2024-10-16
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Atomic model'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Structure summary'
6 4 'Structure model' 'Data collection'
7 4 'Structure model' 'Database references'
8 4 'Structure model' 'Derived calculations'
9 4 'Structure model' 'Refinement description'
10 4 'Structure model' 'Structure summary'
11 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' atom_site
2 3 'Structure model' chem_comp
3 3 'Structure model' entity
4 3 'Structure model' pdbx_branch_scheme
5 3 'Structure model' pdbx_chem_comp_identifier
6 3 'Structure model' pdbx_entity_branch
7 3 'Structure model' pdbx_entity_branch_descriptor
8 3 'Structure model' pdbx_entity_branch_link
9 3 'Structure model' pdbx_entity_branch_list
10 3 'Structure model' pdbx_entity_nonpoly
11 3 'Structure model' pdbx_nonpoly_scheme
12 3 'Structure model' pdbx_struct_assembly_gen
13 3 'Structure model' struct_asym
14 3 'Structure model' struct_conn
15 3 'Structure model' struct_site
16 3 'Structure model' struct_site_gen
17 4 'Structure model' chem_comp
18 4 'Structure model' chem_comp_atom
19 4 'Structure model' chem_comp_bond
20 4 'Structure model' database_2
21 4 'Structure model' pdbx_initial_refinement_model
22 4 'Structure model' struct_conn
23 5 'Structure model' pdbx_entry_details
24 5 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_atom_site.B_iso_or_equiv'
2 3 'Structure model' '_atom_site.Cartn_x'
3 3 'Structure model' '_atom_site.Cartn_y'
4 3 'Structure model' '_atom_site.Cartn_z'
5 3 'Structure model' '_atom_site.auth_asym_id'
6 3 'Structure model' '_atom_site.auth_atom_id'
7 3 'Structure model' '_atom_site.auth_comp_id'
8 3 'Structure model' '_atom_site.auth_seq_id'
9 3 'Structure model' '_atom_site.label_asym_id'
10 3 'Structure model' '_atom_site.label_atom_id'
11 3 'Structure model' '_atom_site.label_comp_id'
12 3 'Structure model' '_atom_site.label_entity_id'
13 3 'Structure model' '_atom_site.type_symbol'
14 3 'Structure model' '_chem_comp.mon_nstd_flag'
15 3 'Structure model' '_chem_comp.name'
16 3 'Structure model' '_chem_comp.type'
17 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
18 3 'Structure model' '_struct_conn.pdbx_role'
19 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
20 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
21 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
22 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
23 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
24 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
25 4 'Structure model' '_chem_comp.pdbx_synonyms'
26 4 'Structure model' '_database_2.pdbx_DOI'
27 4 'Structure model' '_database_2.pdbx_database_accession'
28 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 5DYS
_pdbx_database_status.recvd_initial_deposition_date 2015-09-25
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Singhal, A.' 1
'Guo, Y.' 2
'Matkovic, M.' 3
'Schertler, G.' 4
'Deupi, X.' 5
'Yan, E.' 6
'Standfuss, J.' 7
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country UK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Embo Rep.'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 1469-3178
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 17
_citation.language ?
_citation.page_first 1431
_citation.page_last 1440
_citation.title 'Structural role of the T94I rhodopsin mutation in congenital stationary night blindness.'
_citation.year 2016
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.15252/embr.201642671
_citation.pdbx_database_id_PubMed 27458239
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Singhal, A.' 1 ?
primary 'Guo, Y.' 2 ?
primary 'Matkovic, M.' 3 ?
primary 'Schertler, G.' 4 ?
primary 'Deupi, X.' 5 ?
primary 'Yan, E.C.' 6 ?
primary 'Standfuss, J.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man Rhodopsin 39046.641 1 ? 'N2C, D282C, T94I' ? ?
2 branched man
;alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
;
910.823 1 ? ? ? ?
3 non-polymer man RETINAL 284.436 1 ? 'N2C, D282C, T94I' ? ?
4 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ?
5 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 2 ? ? ? ?
6 non-polymer syn 'PALMITIC ACID' 256.424 2 ? ? ? ?
7 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ?
8 water nat water 18.015 29 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code
;(ACE)MCGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYI
LLNLAVADLFMVFGGFTTILYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIM
GVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA
QQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRN
CMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
;
_entity_poly.pdbx_seq_one_letter_code_can
;XMCGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNL
AVADLFMVFGGFTTILYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF
TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE
SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVT
TLCCGKNPLGDDEASTTVSKTETSQVAPA
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 RETINAL RET
4 'ACETATE ION' ACT
5 'octyl beta-D-glucopyranoside' BOG
6 'PALMITIC ACID' PLM
7 'SULFATE ION' SO4
8 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ACE n
1 2 MET n
1 3 CYS n
1 4 GLY n
1 5 THR n
1 6 GLU n
1 7 GLY n
1 8 PRO n
1 9 ASN n
1 10 PHE n
1 11 TYR n
1 12 VAL n
1 13 PRO n
1 14 PHE n
1 15 SER n
1 16 ASN n
1 17 LYS n
1 18 THR n
1 19 GLY n
1 20 VAL n
1 21 VAL n
1 22 ARG n
1 23 SER n
1 24 PRO n
1 25 PHE n
1 26 GLU n
1 27 ALA n
1 28 PRO n
1 29 GLN n
1 30 TYR n
1 31 TYR n
1 32 LEU n
1 33 ALA n
1 34 GLU n
1 35 PRO n
1 36 TRP n
1 37 GLN n
1 38 PHE n
1 39 SER n
1 40 MET n
1 41 LEU n
1 42 ALA n
1 43 ALA n
1 44 TYR n
1 45 MET n
1 46 PHE n
1 47 LEU n
1 48 LEU n
1 49 ILE n
1 50 MET n
1 51 LEU n
1 52 GLY n
1 53 PHE n
1 54 PRO n
1 55 ILE n
1 56 ASN n
1 57 PHE n
1 58 LEU n
1 59 THR n
1 60 LEU n
1 61 TYR n
1 62 VAL n
1 63 THR n
1 64 VAL n
1 65 GLN n
1 66 HIS n
1 67 LYS n
1 68 LYS n
1 69 LEU n
1 70 ARG n
1 71 THR n
1 72 PRO n
1 73 LEU n
1 74 ASN n
1 75 TYR n
1 76 ILE n
1 77 LEU n
1 78 LEU n
1 79 ASN n
1 80 LEU n
1 81 ALA n
1 82 VAL n
1 83 ALA n
1 84 ASP n
1 85 LEU n
1 86 PHE n
1 87 MET n
1 88 VAL n
1 89 PHE n
1 90 GLY n
1 91 GLY n
1 92 PHE n
1 93 THR n
1 94 THR n
1 95 ILE n
1 96 LEU n
1 97 TYR n
1 98 THR n
1 99 SER n
1 100 LEU n
1 101 HIS n
1 102 GLY n
1 103 TYR n
1 104 PHE n
1 105 VAL n
1 106 PHE n
1 107 GLY n
1 108 PRO n
1 109 THR n
1 110 GLY n
1 111 CYS n
1 112 ASN n
1 113 LEU n
1 114 GLU n
1 115 GLY n
1 116 PHE n
1 117 PHE n
1 118 ALA n
1 119 THR n
1 120 LEU n
1 121 GLY n
1 122 GLY n
1 123 GLU n
1 124 ILE n
1 125 ALA n
1 126 LEU n
1 127 TRP n
1 128 SER n
1 129 LEU n
1 130 VAL n
1 131 VAL n
1 132 LEU n
1 133 ALA n
1 134 ILE n
1 135 GLU n
1 136 ARG n
1 137 TYR n
1 138 VAL n
1 139 VAL n
1 140 VAL n
1 141 CYS n
1 142 LYS n
1 143 PRO n
1 144 MET n
1 145 SER n
1 146 ASN n
1 147 PHE n
1 148 ARG n
1 149 PHE n
1 150 GLY n
1 151 GLU n
1 152 ASN n
1 153 HIS n
1 154 ALA n
1 155 ILE n
1 156 MET n
1 157 GLY n
1 158 VAL n
1 159 ALA n
1 160 PHE n
1 161 THR n
1 162 TRP n
1 163 VAL n
1 164 MET n
1 165 ALA n
1 166 LEU n
1 167 ALA n
1 168 CYS n
1 169 ALA n
1 170 ALA n
1 171 PRO n
1 172 PRO n
1 173 LEU n
1 174 VAL n
1 175 GLY n
1 176 TRP n
1 177 SER n
1 178 ARG n
1 179 TYR n
1 180 ILE n
1 181 PRO n
1 182 GLU n
1 183 GLY n
1 184 MET n
1 185 GLN n
1 186 CYS n
1 187 SER n
1 188 CYS n
1 189 GLY n
1 190 ILE n
1 191 ASP n
1 192 TYR n
1 193 TYR n
1 194 THR n
1 195 PRO n
1 196 HIS n
1 197 GLU n
1 198 GLU n
1 199 THR n
1 200 ASN n
1 201 ASN n
1 202 GLU n
1 203 SER n
1 204 PHE n
1 205 VAL n
1 206 ILE n
1 207 TYR n
1 208 MET n
1 209 PHE n
1 210 VAL n
1 211 VAL n
1 212 HIS n
1 213 PHE n
1 214 ILE n
1 215 ILE n
1 216 PRO n
1 217 LEU n
1 218 ILE n
1 219 VAL n
1 220 ILE n
1 221 PHE n
1 222 PHE n
1 223 CYS n
1 224 TYR n
1 225 GLY n
1 226 GLN n
1 227 LEU n
1 228 VAL n
1 229 PHE n
1 230 THR n
1 231 VAL n
1 232 LYS n
1 233 GLU n
1 234 ALA n
1 235 ALA n
1 236 ALA n
1 237 GLN n
1 238 GLN n
1 239 GLN n
1 240 GLU n
1 241 SER n
1 242 ALA n
1 243 THR n
1 244 THR n
1 245 GLN n
1 246 LYS n
1 247 ALA n
1 248 GLU n
1 249 LYS n
1 250 GLU n
1 251 VAL n
1 252 THR n
1 253 ARG n
1 254 MET n
1 255 VAL n
1 256 ILE n
1 257 ILE n
1 258 MET n
1 259 VAL n
1 260 ILE n
1 261 ALA n
1 262 PHE n
1 263 LEU n
1 264 ILE n
1 265 CYS n
1 266 TRP n
1 267 LEU n
1 268 PRO n
1 269 TYR n
1 270 ALA n
1 271 GLY n
1 272 VAL n
1 273 ALA n
1 274 PHE n
1 275 TYR n
1 276 ILE n
1 277 PHE n
1 278 THR n
1 279 HIS n
1 280 GLN n
1 281 GLY n
1 282 SER n
1 283 CYS n
1 284 PHE n
1 285 GLY n
1 286 PRO n
1 287 ILE n
1 288 PHE n
1 289 MET n
1 290 THR n
1 291 ILE n
1 292 PRO n
1 293 ALA n
1 294 PHE n
1 295 PHE n
1 296 ALA n
1 297 LYS n
1 298 THR n
1 299 SER n
1 300 ALA n
1 301 VAL n
1 302 TYR n
1 303 ASN n
1 304 PRO n
1 305 VAL n
1 306 ILE n
1 307 TYR n
1 308 ILE n
1 309 MET n
1 310 MET n
1 311 ASN n
1 312 LYS n
1 313 GLN n
1 314 PHE n
1 315 ARG n
1 316 ASN n
1 317 CYS n
1 318 MET n
1 319 VAL n
1 320 THR n
1 321 THR n
1 322 LEU n
1 323 CYS n
1 324 CYS n
1 325 GLY n
1 326 LYS n
1 327 ASN n
1 328 PRO n
1 329 LEU n
1 330 GLY n
1 331 ASP n
1 332 ASP n
1 333 GLU n
1 334 ALA n
1 335 SER n
1 336 THR n
1 337 THR n
1 338 VAL n
1 339 SER n
1 340 LYS n
1 341 THR n
1 342 GLU n
1 343 THR n
1 344 SER n
1 345 GLN n
1 346 VAL n
1 347 ALA n
1 348 PRO n
1 349 ALA n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 349
_entity_src_gen.gene_src_common_name Bovine
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene RHO
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name Human
_entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line 'HEK293S GNTI-'
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name 'pCMV-tet O'
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 'DManpa1-3[DManpb1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-'
'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-2/a4-b1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan
1.1.0
3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][b-D-Manp]{}}}}}' LINUCS PDB-CARE
?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ?
2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ?
3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ?
4 2 5 BMA C1 O1 3 BMA O6 HO6 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053
ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6'
180.156
BOG D-saccharide n 'octyl beta-D-glucopyranoside'
'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6'
180.156
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
RET non-polymer . RETINAL ? 'C20 H28 O' 284.436
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb
BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose
BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp
BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man
BOG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-octylglucoside
MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa
MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose
MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp
MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ACE 1 0 0 ACE ACE A . n
A 1 2 MET 2 1 1 MET MET A . n
A 1 3 CYS 3 2 2 CYS CYS A . n
A 1 4 GLY 4 3 3 GLY GLY A . n
A 1 5 THR 5 4 4 THR THR A . n
A 1 6 GLU 6 5 5 GLU GLU A . n
A 1 7 GLY 7 6 6 GLY GLY A . n
A 1 8 PRO 8 7 7 PRO PRO A . n
A 1 9 ASN 9 8 8 ASN ASN A . n
A 1 10 PHE 10 9 9 PHE PHE A . n
A 1 11 TYR 11 10 10 TYR TYR A . n
A 1 12 VAL 12 11 11 VAL VAL A . n
A 1 13 PRO 13 12 12 PRO PRO A . n
A 1 14 PHE 14 13 13 PHE PHE A . n
A 1 15 SER 15 14 14 SER SER A . n
A 1 16 ASN 16 15 15 ASN ASN A . n
A 1 17 LYS 17 16 16 LYS LYS A . n
A 1 18 THR 18 17 17 THR THR A . n
A 1 19 GLY 19 18 18 GLY GLY A . n
A 1 20 VAL 20 19 19 VAL VAL A . n
A 1 21 VAL 21 20 20 VAL VAL A . n
A 1 22 ARG 22 21 21 ARG ARG A . n
A 1 23 SER 23 22 22 SER SER A . n
A 1 24 PRO 24 23 23 PRO PRO A . n
A 1 25 PHE 25 24 24 PHE PHE A . n
A 1 26 GLU 26 25 25 GLU GLU A . n
A 1 27 ALA 27 26 26 ALA ALA A . n
A 1 28 PRO 28 27 27 PRO PRO A . n
A 1 29 GLN 29 28 28 GLN GLN A . n
A 1 30 TYR 30 29 29 TYR TYR A . n
A 1 31 TYR 31 30 30 TYR TYR A . n
A 1 32 LEU 32 31 31 LEU LEU A . n
A 1 33 ALA 33 32 32 ALA ALA A . n
A 1 34 GLU 34 33 33 GLU GLU A . n
A 1 35 PRO 35 34 34 PRO PRO A . n
A 1 36 TRP 36 35 35 TRP TRP A . n
A 1 37 GLN 37 36 36 GLN GLN A . n
A 1 38 PHE 38 37 37 PHE PHE A . n
A 1 39 SER 39 38 38 SER SER A . n
A 1 40 MET 40 39 39 MET MET A . n
A 1 41 LEU 41 40 40 LEU LEU A . n
A 1 42 ALA 42 41 41 ALA ALA A . n
A 1 43 ALA 43 42 42 ALA ALA A . n
A 1 44 TYR 44 43 43 TYR TYR A . n
A 1 45 MET 45 44 44 MET MET A . n
A 1 46 PHE 46 45 45 PHE PHE A . n
A 1 47 LEU 47 46 46 LEU LEU A . n
A 1 48 LEU 48 47 47 LEU LEU A . n
A 1 49 ILE 49 48 48 ILE ILE A . n
A 1 50 MET 50 49 49 MET MET A . n
A 1 51 LEU 51 50 50 LEU LEU A . n
A 1 52 GLY 52 51 51 GLY GLY A . n
A 1 53 PHE 53 52 52 PHE PHE A . n
A 1 54 PRO 54 53 53 PRO PRO A . n
A 1 55 ILE 55 54 54 ILE ILE A . n
A 1 56 ASN 56 55 55 ASN ASN A . n
A 1 57 PHE 57 56 56 PHE PHE A . n
A 1 58 LEU 58 57 57 LEU LEU A . n
A 1 59 THR 59 58 58 THR THR A . n
A 1 60 LEU 60 59 59 LEU LEU A . n
A 1 61 TYR 61 60 60 TYR TYR A . n
A 1 62 VAL 62 61 61 VAL VAL A . n
A 1 63 THR 63 62 62 THR THR A . n
A 1 64 VAL 64 63 63 VAL VAL A . n
A 1 65 GLN 65 64 64 GLN GLN A . n
A 1 66 HIS 66 65 65 HIS HIS A . n
A 1 67 LYS 67 66 66 LYS LYS A . n
A 1 68 LYS 68 67 67 LYS LYS A . n
A 1 69 LEU 69 68 68 LEU LEU A . n
A 1 70 ARG 70 69 69 ARG ARG A . n
A 1 71 THR 71 70 70 THR THR A . n
A 1 72 PRO 72 71 71 PRO PRO A . n
A 1 73 LEU 73 72 72 LEU LEU A . n
A 1 74 ASN 74 73 73 ASN ASN A . n
A 1 75 TYR 75 74 74 TYR TYR A . n
A 1 76 ILE 76 75 75 ILE ILE A . n
A 1 77 LEU 77 76 76 LEU LEU A . n
A 1 78 LEU 78 77 77 LEU LEU A . n
A 1 79 ASN 79 78 78 ASN ASN A . n
A 1 80 LEU 80 79 79 LEU LEU A . n
A 1 81 ALA 81 80 80 ALA ALA A . n
A 1 82 VAL 82 81 81 VAL VAL A . n
A 1 83 ALA 83 82 82 ALA ALA A . n
A 1 84 ASP 84 83 83 ASP ASP A . n
A 1 85 LEU 85 84 84 LEU LEU A . n
A 1 86 PHE 86 85 85 PHE PHE A . n
A 1 87 MET 87 86 86 MET MET A . n
A 1 88 VAL 88 87 87 VAL VAL A . n
A 1 89 PHE 89 88 88 PHE PHE A . n
A 1 90 GLY 90 89 89 GLY GLY A . n
A 1 91 GLY 91 90 90 GLY GLY A . n
A 1 92 PHE 92 91 91 PHE PHE A . n
A 1 93 THR 93 92 92 THR THR A . n
A 1 94 THR 94 93 93 THR THR A . n
A 1 95 ILE 95 94 94 ILE ILE A . n
A 1 96 LEU 96 95 95 LEU LEU A . n
A 1 97 TYR 97 96 96 TYR TYR A . n
A 1 98 THR 98 97 97 THR THR A . n
A 1 99 SER 99 98 98 SER SER A . n
A 1 100 LEU 100 99 99 LEU LEU A . n
A 1 101 HIS 101 100 100 HIS HIS A . n
A 1 102 GLY 102 101 101 GLY GLY A . n
A 1 103 TYR 103 102 102 TYR TYR A . n
A 1 104 PHE 104 103 103 PHE PHE A . n
A 1 105 VAL 105 104 104 VAL VAL A . n
A 1 106 PHE 106 105 105 PHE PHE A . n
A 1 107 GLY 107 106 106 GLY GLY A . n
A 1 108 PRO 108 107 107 PRO PRO A . n
A 1 109 THR 109 108 108 THR THR A . n
A 1 110 GLY 110 109 109 GLY GLY A . n
A 1 111 CYS 111 110 110 CYS CYS A . n
A 1 112 ASN 112 111 111 ASN ASN A . n
A 1 113 LEU 113 112 112 LEU LEU A . n
A 1 114 GLU 114 113 113 GLU GLU A . n
A 1 115 GLY 115 114 114 GLY GLY A . n
A 1 116 PHE 116 115 115 PHE PHE A . n
A 1 117 PHE 117 116 116 PHE PHE A . n
A 1 118 ALA 118 117 117 ALA ALA A . n
A 1 119 THR 119 118 118 THR THR A . n
A 1 120 LEU 120 119 119 LEU LEU A . n
A 1 121 GLY 121 120 120 GLY GLY A . n
A 1 122 GLY 122 121 121 GLY GLY A . n
A 1 123 GLU 123 122 122 GLU GLU A . n
A 1 124 ILE 124 123 123 ILE ILE A . n
A 1 125 ALA 125 124 124 ALA ALA A . n
A 1 126 LEU 126 125 125 LEU LEU A . n
A 1 127 TRP 127 126 126 TRP TRP A . n
A 1 128 SER 128 127 127 SER SER A . n
A 1 129 LEU 129 128 128 LEU LEU A . n
A 1 130 VAL 130 129 129 VAL VAL A . n
A 1 131 VAL 131 130 130 VAL VAL A . n
A 1 132 LEU 132 131 131 LEU LEU A . n
A 1 133 ALA 133 132 132 ALA ALA A . n
A 1 134 ILE 134 133 133 ILE ILE A . n
A 1 135 GLU 135 134 134 GLU GLU A . n
A 1 136 ARG 136 135 135 ARG ARG A . n
A 1 137 TYR 137 136 136 TYR TYR A . n
A 1 138 VAL 138 137 137 VAL VAL A . n
A 1 139 VAL 139 138 138 VAL VAL A . n
A 1 140 VAL 140 139 139 VAL VAL A . n
A 1 141 CYS 141 140 140 CYS CYS A . n
A 1 142 LYS 142 141 141 LYS LYS A . n
A 1 143 PRO 143 142 142 PRO PRO A . n
A 1 144 MET 144 143 143 MET MET A . n
A 1 145 SER 145 144 144 SER SER A . n
A 1 146 ASN 146 145 145 ASN ASN A . n
A 1 147 PHE 147 146 146 PHE PHE A . n
A 1 148 ARG 148 147 147 ARG ARG A . n
A 1 149 PHE 149 148 148 PHE PHE A . n
A 1 150 GLY 150 149 149 GLY GLY A . n
A 1 151 GLU 151 150 150 GLU GLU A . n
A 1 152 ASN 152 151 151 ASN ASN A . n
A 1 153 HIS 153 152 152 HIS HIS A . n
A 1 154 ALA 154 153 153 ALA ALA A . n
A 1 155 ILE 155 154 154 ILE ILE A . n
A 1 156 MET 156 155 155 MET MET A . n
A 1 157 GLY 157 156 156 GLY GLY A . n
A 1 158 VAL 158 157 157 VAL VAL A . n
A 1 159 ALA 159 158 158 ALA ALA A . n
A 1 160 PHE 160 159 159 PHE PHE A . n
A 1 161 THR 161 160 160 THR THR A . n
A 1 162 TRP 162 161 161 TRP TRP A . n
A 1 163 VAL 163 162 162 VAL VAL A . n
A 1 164 MET 164 163 163 MET MET A . n
A 1 165 ALA 165 164 164 ALA ALA A . n
A 1 166 LEU 166 165 165 LEU LEU A . n
A 1 167 ALA 167 166 166 ALA ALA A . n
A 1 168 CYS 168 167 167 CYS CYS A . n
A 1 169 ALA 169 168 168 ALA ALA A . n
A 1 170 ALA 170 169 169 ALA ALA A . n
A 1 171 PRO 171 170 170 PRO PRO A . n
A 1 172 PRO 172 171 171 PRO PRO A . n
A 1 173 LEU 173 172 172 LEU LEU A . n
A 1 174 VAL 174 173 173 VAL VAL A . n
A 1 175 GLY 175 174 174 GLY GLY A . n
A 1 176 TRP 176 175 175 TRP TRP A . n
A 1 177 SER 177 176 176 SER SER A . n
A 1 178 ARG 178 177 177 ARG ARG A . n
A 1 179 TYR 179 178 178 TYR TYR A . n
A 1 180 ILE 180 179 179 ILE ILE A . n
A 1 181 PRO 181 180 180 PRO PRO A . n
A 1 182 GLU 182 181 181 GLU GLU A . n
A 1 183 GLY 183 182 182 GLY GLY A . n
A 1 184 MET 184 183 183 MET MET A . n
A 1 185 GLN 185 184 184 GLN GLN A . n
A 1 186 CYS 186 185 185 CYS CYS A . n
A 1 187 SER 187 186 186 SER SER A . n
A 1 188 CYS 188 187 187 CYS CYS A . n
A 1 189 GLY 189 188 188 GLY GLY A . n
A 1 190 ILE 190 189 189 ILE ILE A . n
A 1 191 ASP 191 190 190 ASP ASP A . n
A 1 192 TYR 192 191 191 TYR TYR A . n
A 1 193 TYR 193 192 192 TYR TYR A . n
A 1 194 THR 194 193 193 THR THR A . n
A 1 195 PRO 195 194 194 PRO PRO A . n
A 1 196 HIS 196 195 195 HIS HIS A . n
A 1 197 GLU 197 196 196 GLU GLU A . n
A 1 198 GLU 198 197 197 GLU GLU A . n
A 1 199 THR 199 198 198 THR THR A . n
A 1 200 ASN 200 199 199 ASN ASN A . n
A 1 201 ASN 201 200 200 ASN ASN A . n
A 1 202 GLU 202 201 201 GLU GLU A . n
A 1 203 SER 203 202 202 SER SER A . n
A 1 204 PHE 204 203 203 PHE PHE A . n
A 1 205 VAL 205 204 204 VAL VAL A . n
A 1 206 ILE 206 205 205 ILE ILE A . n
A 1 207 TYR 207 206 206 TYR TYR A . n
A 1 208 MET 208 207 207 MET MET A . n
A 1 209 PHE 209 208 208 PHE PHE A . n
A 1 210 VAL 210 209 209 VAL VAL A . n
A 1 211 VAL 211 210 210 VAL VAL A . n
A 1 212 HIS 212 211 211 HIS HIS A . n
A 1 213 PHE 213 212 212 PHE PHE A . n
A 1 214 ILE 214 213 213 ILE ILE A . n
A 1 215 ILE 215 214 214 ILE ILE A . n
A 1 216 PRO 216 215 215 PRO PRO A . n
A 1 217 LEU 217 216 216 LEU LEU A . n
A 1 218 ILE 218 217 217 ILE ILE A . n
A 1 219 VAL 219 218 218 VAL VAL A . n
A 1 220 ILE 220 219 219 ILE ILE A . n
A 1 221 PHE 221 220 220 PHE PHE A . n
A 1 222 PHE 222 221 221 PHE PHE A . n
A 1 223 CYS 223 222 222 CYS CYS A . n
A 1 224 TYR 224 223 223 TYR TYR A . n
A 1 225 GLY 225 224 224 GLY GLY A . n
A 1 226 GLN 226 225 225 GLN GLN A . n
A 1 227 LEU 227 226 226 LEU LEU A . n
A 1 228 VAL 228 227 227 VAL VAL A . n
A 1 229 PHE 229 228 228 PHE PHE A . n
A 1 230 THR 230 229 229 THR THR A . n
A 1 231 VAL 231 230 230 VAL VAL A . n
A 1 232 LYS 232 231 231 LYS LYS A . n
A 1 233 GLU 233 232 232 GLU GLU A . n
A 1 234 ALA 234 233 233 ALA ALA A . n
A 1 235 ALA 235 234 234 ALA ALA A . n
A 1 236 ALA 236 235 235 ALA ALA A . n
A 1 237 GLN 237 236 236 GLN GLN A . n
A 1 238 GLN 238 237 237 GLN GLN A . n
A 1 239 GLN 239 238 238 GLN GLN A . n
A 1 240 GLU 240 239 239 GLU GLU A . n
A 1 241 SER 241 240 240 SER SER A . n
A 1 242 ALA 242 241 241 ALA ALA A . n
A 1 243 THR 243 242 242 THR THR A . n
A 1 244 THR 244 243 243 THR THR A . n
A 1 245 GLN 245 244 244 GLN GLN A . n
A 1 246 LYS 246 245 245 LYS LYS A . n
A 1 247 ALA 247 246 246 ALA ALA A . n
A 1 248 GLU 248 247 247 GLU GLU A . n
A 1 249 LYS 249 248 248 LYS LYS A . n
A 1 250 GLU 250 249 249 GLU GLU A . n
A 1 251 VAL 251 250 250 VAL VAL A . n
A 1 252 THR 252 251 251 THR THR A . n
A 1 253 ARG 253 252 252 ARG ARG A . n
A 1 254 MET 254 253 253 MET MET A . n
A 1 255 VAL 255 254 254 VAL VAL A . n
A 1 256 ILE 256 255 255 ILE ILE A . n
A 1 257 ILE 257 256 256 ILE ILE A . n
A 1 258 MET 258 257 257 MET MET A . n
A 1 259 VAL 259 258 258 VAL VAL A . n
A 1 260 ILE 260 259 259 ILE ILE A . n
A 1 261 ALA 261 260 260 ALA ALA A . n
A 1 262 PHE 262 261 261 PHE PHE A . n
A 1 263 LEU 263 262 262 LEU LEU A . n
A 1 264 ILE 264 263 263 ILE ILE A . n
A 1 265 CYS 265 264 264 CYS CYS A . n
A 1 266 TRP 266 265 265 TRP TRP A . n
A 1 267 LEU 267 266 266 LEU LEU A . n
A 1 268 PRO 268 267 267 PRO PRO A . n
A 1 269 TYR 269 268 268 TYR TYR A . n
A 1 270 ALA 270 269 269 ALA ALA A . n
A 1 271 GLY 271 270 270 GLY GLY A . n
A 1 272 VAL 272 271 271 VAL VAL A . n
A 1 273 ALA 273 272 272 ALA ALA A . n
A 1 274 PHE 274 273 273 PHE PHE A . n
A 1 275 TYR 275 274 274 TYR TYR A . n
A 1 276 ILE 276 275 275 ILE ILE A . n
A 1 277 PHE 277 276 276 PHE PHE A . n
A 1 278 THR 278 277 277 THR THR A . n
A 1 279 HIS 279 278 278 HIS HIS A . n
A 1 280 GLN 280 279 279 GLN GLN A . n
A 1 281 GLY 281 280 280 GLY GLY A . n
A 1 282 SER 282 281 281 SER SER A . n
A 1 283 CYS 283 282 282 CYS CYS A . n
A 1 284 PHE 284 283 283 PHE PHE A . n
A 1 285 GLY 285 284 284 GLY GLY A . n
A 1 286 PRO 286 285 285 PRO PRO A . n
A 1 287 ILE 287 286 286 ILE ILE A . n
A 1 288 PHE 288 287 287 PHE PHE A . n
A 1 289 MET 289 288 288 MET MET A . n
A 1 290 THR 290 289 289 THR THR A . n
A 1 291 ILE 291 290 290 ILE ILE A . n
A 1 292 PRO 292 291 291 PRO PRO A . n
A 1 293 ALA 293 292 292 ALA ALA A . n
A 1 294 PHE 294 293 293 PHE PHE A . n
A 1 295 PHE 295 294 294 PHE PHE A . n
A 1 296 ALA 296 295 295 ALA ALA A . n
A 1 297 LYS 297 296 296 LYS LYS A . n
A 1 298 THR 298 297 297 THR THR A . n
A 1 299 SER 299 298 298 SER SER A . n
A 1 300 ALA 300 299 299 ALA ALA A . n
A 1 301 VAL 301 300 300 VAL VAL A . n
A 1 302 TYR 302 301 301 TYR TYR A . n
A 1 303 ASN 303 302 302 ASN ASN A . n
A 1 304 PRO 304 303 303 PRO PRO A . n
A 1 305 VAL 305 304 304 VAL VAL A . n
A 1 306 ILE 306 305 305 ILE ILE A . n
A 1 307 TYR 307 306 306 TYR TYR A . n
A 1 308 ILE 308 307 307 ILE ILE A . n
A 1 309 MET 309 308 308 MET MET A . n
A 1 310 MET 310 309 309 MET MET A . n
A 1 311 ASN 311 310 310 ASN ASN A . n
A 1 312 LYS 312 311 311 LYS LYS A . n
A 1 313 GLN 313 312 312 GLN GLN A . n
A 1 314 PHE 314 313 313 PHE PHE A . n
A 1 315 ARG 315 314 314 ARG ARG A . n
A 1 316 ASN 316 315 315 ASN ASN A . n
A 1 317 CYS 317 316 316 CYS CYS A . n
A 1 318 MET 318 317 317 MET MET A . n
A 1 319 VAL 319 318 318 VAL VAL A . n
A 1 320 THR 320 319 319 THR THR A . n
A 1 321 THR 321 320 320 THR THR A . n
A 1 322 LEU 322 321 321 LEU LEU A . n
A 1 323 CYS 323 322 322 CYS CYS A . n
A 1 324 CYS 324 323 323 CYS CYS A . n
A 1 325 GLY 325 324 324 GLY GLY A . n
A 1 326 LYS 326 325 325 LYS LYS A . n
A 1 327 ASN 327 326 326 ASN ASN A . n
A 1 328 PRO 328 327 ? ? ? A . n
A 1 329 LEU 329 328 ? ? ? A . n
A 1 330 GLY 330 329 ? ? ? A . n
A 1 331 ASP 331 330 ? ? ? A . n
A 1 332 ASP 332 331 ? ? ? A . n
A 1 333 GLU 333 332 ? ? ? A . n
A 1 334 ALA 334 333 ? ? ? A . n
A 1 335 SER 335 334 ? ? ? A . n
A 1 336 THR 336 335 ? ? ? A . n
A 1 337 THR 337 336 ? ? ? A . n
A 1 338 VAL 338 337 ? ? ? A . n
A 1 339 SER 339 338 ? ? ? A . n
A 1 340 LYS 340 339 ? ? ? A . n
A 1 341 THR 341 340 ? ? ? A . n
A 1 342 GLU 342 341 ? ? ? A . n
A 1 343 THR 343 342 ? ? ? A . n
A 1 344 SER 344 343 ? ? ? A . n
A 1 345 GLN 345 344 ? ? ? A . n
A 1 346 VAL 346 345 ? ? ? A . n
A 1 347 ALA 347 346 ? ? ? A . n
A 1 348 PRO 348 347 ? ? ? A . n
A 1 349 ALA 349 348 ? ? ? A . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 NAG 1 B NAG 1 S NAG 301 n
B 2 NAG 2 B NAG 2 S NAG 302 n
B 2 BMA 3 B BMA 3 S BMA 303 n
B 2 MAN 4 B MAN 4 S MAN 304 n
B 2 BMA 5 B BMA 5 S MAN 305 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 RET 1 401 401 RET RET A .
D 4 ACT 1 402 102 ACT ACT A .
E 4 ACT 1 403 103 ACT ACT A .
F 5 BOG 1 404 204 BOG BOG A .
G 6 PLM 1 405 205 PLM PLM A .
H 6 PLM 1 406 206 PLM PLM A .
I 5 BOG 1 412 601 BOG BOG A .
J 7 SO4 1 413 801 SO4 SO4 A .
K 8 HOH 1 501 25 HOH HOH A .
K 8 HOH 2 502 21 HOH HOH A .
K 8 HOH 3 503 43 HOH HOH A .
K 8 HOH 4 504 5 HOH HOH A .
K 8 HOH 5 505 41 HOH HOH A .
K 8 HOH 6 506 4 HOH HOH A .
K 8 HOH 7 507 14 HOH HOH A .
K 8 HOH 8 508 44 HOH HOH A .
K 8 HOH 9 509 46 HOH HOH A .
K 8 HOH 10 510 3 HOH HOH A .
K 8 HOH 11 511 26 HOH HOH A .
K 8 HOH 12 512 18 HOH HOH A .
K 8 HOH 13 513 13 HOH HOH A .
K 8 HOH 14 514 19 HOH HOH A .
K 8 HOH 15 515 20 HOH HOH A .
K 8 HOH 16 516 27 HOH HOH A .
K 8 HOH 17 517 8 HOH HOH A .
K 8 HOH 18 518 28 HOH HOH A .
K 8 HOH 19 519 45 HOH HOH A .
K 8 HOH 20 520 12 HOH HOH A .
K 8 HOH 21 521 35 HOH HOH A .
K 8 HOH 22 522 32 HOH HOH A .
K 8 HOH 23 523 10 HOH HOH A .
K 8 HOH 24 524 39 HOH HOH A .
K 8 HOH 25 525 11 HOH HOH A .
K 8 HOH 26 526 1 HOH HOH A .
K 8 HOH 27 527 40 HOH HOH A .
K 8 HOH 28 528 7 HOH HOH A .
K 8 HOH 29 529 23 HOH HOH A .
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0131 1
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3
? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 120.00
_cell.angle_gamma_esd ?
_cell.entry_id 5DYS
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 242.301
_cell.length_a_esd ?
_cell.length_b 242.301
_cell.length_b_esd ?
_cell.length_c 112.055
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 18
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 5DYS
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 155
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'H 3 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 5DYS
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews ?
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 277
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details 'Ammonium Sulfate, Sodium acetate'
_exptl_crystal_grow.pdbx_pH_range 4-6
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector PIXEL
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'PSI PILATUS 6M'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2012-10-17
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'SLS BEAMLINE X06DA'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 1
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline X06DA
_diffrn_source.pdbx_synchrotron_site SLS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 5DYS
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 2.3
_reflns.d_resolution_low 49.4
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 55751
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 99.7
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 18.9
_reflns.pdbx_Rmerge_I_obs 0.094
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 20.11
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high 2.3
_reflns_shell.d_res_low ?
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs ?
_reflns_shell.percent_possible_all ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs 2.243
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_R_split ?
#
_refine.aniso_B[1][1] -2.70
_refine.aniso_B[1][2] -1.35
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][2] -2.70
_refine.aniso_B[2][3] 0.00
_refine.aniso_B[3][3] 8.75
_refine.B_iso_max ?
_refine.B_iso_mean 66.093
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc 0.940
_refine.correlation_coeff_Fo_to_Fc_free 0.939
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 5DYS
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 2.30
_refine.ls_d_res_low 49.4
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 52726
_refine.ls_number_reflns_R_free 2776
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 99.77
_refine.ls_percent_reflns_R_free 5.0
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.21995
_refine.ls_R_factor_R_free 0.23100
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.21936
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details MASK
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 4A4M
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R 0.134
_refine.pdbx_overall_ESU_R_Free 0.125
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B 6.013
_refine.overall_SU_ML 0.128
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id 1
_refine_hist.pdbx_number_atoms_protein 2592
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 168
_refine_hist.number_atoms_solvent 29
_refine_hist.number_atoms_total 2789
_refine_hist.d_res_high 2.30
_refine_hist.d_res_low 49.4
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.014 0.020 2878 ? r_bond_refined_d ? ?
'X-RAY DIFFRACTION' ? 0.002 0.020 2724 ? r_bond_other_d ? ?
'X-RAY DIFFRACTION' ? 1.797 2.001 3918 ? r_angle_refined_deg ? ?
'X-RAY DIFFRACTION' ? 1.047 3.000 6280 ? r_angle_other_deg ? ?
'X-RAY DIFFRACTION' ? 6.167 5.000 331 ? r_dihedral_angle_1_deg ? ?
'X-RAY DIFFRACTION' ? 32.918 22.991 112 ? r_dihedral_angle_2_deg ? ?
'X-RAY DIFFRACTION' ? 16.059 15.000 415 ? r_dihedral_angle_3_deg ? ?
'X-RAY DIFFRACTION' ? 20.137 15.000 7 ? r_dihedral_angle_4_deg ? ?
'X-RAY DIFFRACTION' ? 0.094 0.200 444 ? r_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.010 0.021 3096 ? r_gen_planes_refined ? ?
'X-RAY DIFFRACTION' ? 0.002 0.020 685 ? r_gen_planes_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ?
'X-RAY DIFFRACTION' ? 4.681 6.303 1316 ? r_mcbond_it ? ?
'X-RAY DIFFRACTION' ? 4.657 6.292 1313 ? r_mcbond_other ? ?
'X-RAY DIFFRACTION' ? 6.646 9.433 1643 ? r_mcangle_it ? ?
'X-RAY DIFFRACTION' ? 6.644 9.438 1644 ? r_mcangle_other ? ?
'X-RAY DIFFRACTION' ? 5.550 6.900 1562 ? r_scbond_it ? ?
'X-RAY DIFFRACTION' ? 5.474 6.895 1558 ? r_scbond_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ?
'X-RAY DIFFRACTION' ? 8.133 10.127 2268 ? r_scangle_other ? ?
'X-RAY DIFFRACTION' ? 9.394 51.718 3204 ? r_long_range_B_refined ? ?
'X-RAY DIFFRACTION' ? 9.399 51.723 3199 ? r_long_range_B_other ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 2.301
_refine_ls_shell.d_res_low 2.360
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 198
_refine_ls_shell.number_reflns_R_work 3758
_refine_ls_shell.percent_reflns_obs 97.10
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.429
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.R_factor_R_work 0.445
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 5DYS
_struct.title 'Crystal Structure of T94I rhodopsin mutant'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag ?
#
_struct_keywords.entry_id 5DYS
_struct_keywords.text
'Rhodopsin, G protein-coupled receptors, Congenital stationary night blindness, constitutive activity, signaling protein'
_struct_keywords.pdbx_keywords 'SIGNALING PROTEIN'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 4 ?
F N N 5 ?
G N N 6 ?
H N N 6 ?
I N N 5 ?
J N N 7 ?
K N N 8 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code OPSD_BOVIN
_struct_ref.pdbx_db_accession P02699
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT
WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT
LCCGKNPLGDDEASTTVSKTETSQVAPA
;
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 5DYS
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 2
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 349
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P02699
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 348
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 348
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 5DYS ACE A 1 ? UNP P02699 ? ? acetylation 0 1
1 5DYS CYS A 3 ? UNP P02699 ASN 2 'engineered mutation' 2 2
1 5DYS ILE A 95 ? UNP P02699 THR 94 'engineered mutation' 94 3
1 5DYS CYS A 283 ? UNP P02699 ASP 282 'engineered mutation' 282 4
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 3760 ?
1 MORE 9 ?
1 'SSA (A^2)' 17310 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 GLU A 34 ? HIS A 66 ? GLU A 33 HIS A 65 1 ? 33
HELX_P HELX_P2 AA2 LYS A 67 ? ARG A 70 ? LYS A 66 ARG A 69 5 ? 4
HELX_P HELX_P3 AA3 THR A 71 ? LEU A 73 ? THR A 70 LEU A 72 5 ? 3
HELX_P HELX_P4 AA4 ASN A 74 ? GLY A 91 ? ASN A 73 GLY A 90 1 ? 18
HELX_P HELX_P5 AA5 GLY A 91 ? GLY A 102 ? GLY A 90 GLY A 101 1 ? 12
HELX_P HELX_P6 AA6 PHE A 106 ? LYS A 142 ? PHE A 105 LYS A 141 1 ? 37
HELX_P HELX_P7 AA7 GLY A 150 ? ALA A 170 ? GLY A 149 ALA A 169 1 ? 21
HELX_P HELX_P8 AA8 PRO A 171 ? VAL A 174 ? PRO A 170 VAL A 173 5 ? 4
HELX_P HELX_P9 AA9 ASN A 200 ? HIS A 212 ? ASN A 199 HIS A 211 1 ? 13
HELX_P HELX_P10 AB1 PHE A 213 ? GLN A 237 ? PHE A 212 GLN A 236 1 ? 25
HELX_P HELX_P11 AB2 SER A 241 ? THR A 278 ? SER A 240 THR A 277 1 ? 38
HELX_P HELX_P12 AB3 GLY A 285 ? ILE A 308 ? GLY A 284 ILE A 307 1 ? 24
HELX_P HELX_P13 AB4 ASN A 311 ? CYS A 323 ? ASN A 310 CYS A 322 1 ? 13
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 283 SG ? ? A CYS 2 A CYS 282 1_555 ? ? ? ? ? ? ? 2.096 ? ?
disulf2 disulf ? ? A CYS 111 SG ? ? ? 1_555 A CYS 188 SG ? ? A CYS 110 A CYS 187 1_555 ? ? ? ? ? ? ? 2.128 ? ?
covale1 covale both ? A ACE 1 C ? ? ? 1_555 A MET 2 N ? ? A ACE 0 A MET 1 1_555 ? ? ? ? ? ? ? 1.384 ? ?
covale2 covale one ? A ASN 16 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 15 B NAG 1 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation
covale3 covale one ? A LYS 297 NZ ? ? ? 1_555 C RET . C15 ? ? A LYS 296 A RET 401 1_555 ? ? ? ? ? ? ? 1.273 ? ?
covale4 covale one ? A CYS 323 SG ? ? ? 1_555 G PLM . C1 ? ? A CYS 322 A PLM 405 1_555 ? ? ? ? ? ? ? 1.705 ? ?
covale5 covale one ? A CYS 324 SG ? ? ? 1_555 H PLM . C1 ? ? A CYS 323 A PLM 406 1_555 ? ? ? ? ? ? ? 1.692 ? ?
covale6 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.417 ? ?
covale7 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.431 ? ?
covale8 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.445 ? ?
covale9 covale both ? B BMA . O6 ? ? ? 1_555 B BMA . C1 ? ? B BMA 3 B BMA 5 1_555 ? ? ? ? ? ? ? 1.470 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 ACE A 1 ? MET A 2 ? ACE A 0 ? 1_555 MET A 1 ? 1_555 . . MET 4 ACE None 'Terminal acetylation'
2 NAG B . ? ASN A 16 ? NAG B 1 ? 1_555 ASN A 15 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
3 RET C . ? LYS A 297 ? RET A 401 ? 1_555 LYS A 296 ? 1_555 C15 NZ LYS 1 RET Retinoylation Lipid/lipid-like
4 PLM G . ? CYS A 323 ? PLM A 405 ? 1_555 CYS A 322 ? 1_555 C1 SG CYS 6 PLM Palmitoylation Lipid/lipid-like
5 PLM H . ? CYS A 324 ? PLM A 406 ? 1_555 CYS A 323 ? 1_555 C1 SG CYS 6 PLM Palmitoylation Lipid/lipid-like
6 CYS A 3 ? CYS A 283 ? CYS A 2 ? 1_555 CYS A 282 ? 1_555 SG SG . . . None 'Disulfide bridge'
7 CYS A 111 ? CYS A 188 ? CYS A 110 ? 1_555 CYS A 187 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 2 ?
AA2 ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA2 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 THR A 5 ? GLY A 7 ? THR A 4 GLY A 6
AA1 2 PHE A 10 ? VAL A 12 ? PHE A 9 VAL A 11
AA2 1 TYR A 179 ? GLU A 182 ? TYR A 178 GLU A 181
AA2 2 SER A 187 ? ILE A 190 ? SER A 186 ILE A 189
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N THR A 5 ? N THR A 4 O VAL A 12 ? O VAL A 11
AA2 1 2 N GLU A 182 ? N GLU A 181 O SER A 187 ? O SER A 186
#
_pdbx_entry_details.entry_id 5DYS
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 NE A ARG 21 ? ? CZ A ARG 21 ? ? NH1 A ARG 21 ? ? 124.00 120.30 3.70 0.50 N
2 1 CA A LEU 125 ? ? CB A LEU 125 ? ? CG A LEU 125 ? ? 129.31 115.30 14.01 2.30 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 GLN A 28 ? ? -107.40 40.57
2 1 ARG A 69 ? ? -74.86 46.15
3 1 SER A 176 ? ? 54.91 -164.71
4 1 GLN A 184 ? ? 82.77 17.75
5 1 GLN A 184 ? ? 82.77 16.38
6 1 PHE A 212 ? ? -122.77 -58.06
7 1 GLN A 237 ? ? -152.30 43.09
8 1 HIS A 278 ? ? -150.47 50.85
9 1 ILE A 307 ? ? -125.18 -56.63
10 1 CYS A 322 ? ? -93.55 34.13
#
_pdbx_validate_peptide_omega.id 1
_pdbx_validate_peptide_omega.PDB_model_num 1
_pdbx_validate_peptide_omega.auth_comp_id_1 MET
_pdbx_validate_peptide_omega.auth_asym_id_1 A
_pdbx_validate_peptide_omega.auth_seq_id_1 1
_pdbx_validate_peptide_omega.PDB_ins_code_1 ?
_pdbx_validate_peptide_omega.label_alt_id_1 ?
_pdbx_validate_peptide_omega.auth_comp_id_2 CYS
_pdbx_validate_peptide_omega.auth_asym_id_2 A
_pdbx_validate_peptide_omega.auth_seq_id_2 2
_pdbx_validate_peptide_omega.PDB_ins_code_2 ?
_pdbx_validate_peptide_omega.label_alt_id_2 ?
_pdbx_validate_peptide_omega.omega -146.02
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A PRO 327 ? A PRO 328
2 1 Y 1 A LEU 328 ? A LEU 329
3 1 Y 1 A GLY 329 ? A GLY 330
4 1 Y 1 A ASP 330 ? A ASP 331
5 1 Y 1 A ASP 331 ? A ASP 332
6 1 Y 1 A GLU 332 ? A GLU 333
7 1 Y 1 A ALA 333 ? A ALA 334
8 1 Y 1 A SER 334 ? A SER 335
9 1 Y 1 A THR 335 ? A THR 336
10 1 Y 1 A THR 336 ? A THR 337
11 1 Y 1 A VAL 337 ? A VAL 338
12 1 Y 1 A SER 338 ? A SER 339
13 1 Y 1 A LYS 339 ? A LYS 340
14 1 Y 1 A THR 340 ? A THR 341
15 1 Y 1 A GLU 341 ? A GLU 342
16 1 Y 1 A THR 342 ? A THR 343
17 1 Y 1 A SER 343 ? A SER 344
18 1 Y 1 A GLN 344 ? A GLN 345
19 1 Y 1 A VAL 345 ? A VAL 346
20 1 Y 1 A ALA 346 ? A ALA 347
21 1 Y 1 A PRO 347 ? A PRO 348
22 1 Y 1 A ALA 348 ? A ALA 349
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ACE C C N N 1
ACE O O N N 2
ACE CH3 C N N 3
ACE H H N N 4
ACE H1 H N N 5
ACE H2 H N N 6
ACE H3 H N N 7
ACT C C N N 8
ACT O O N N 9
ACT OXT O N N 10
ACT CH3 C N N 11
ACT H1 H N N 12
ACT H2 H N N 13
ACT H3 H N N 14
ALA N N N N 15
ALA CA C N S 16
ALA C C N N 17
ALA O O N N 18
ALA CB C N N 19
ALA OXT O N N 20
ALA H H N N 21
ALA H2 H N N 22
ALA HA H N N 23
ALA HB1 H N N 24
ALA HB2 H N N 25
ALA HB3 H N N 26
ALA HXT H N N 27
ARG N N N N 28
ARG CA C N S 29
ARG C C N N 30
ARG O O N N 31
ARG CB C N N 32
ARG CG C N N 33
ARG CD C N N 34
ARG NE N N N 35
ARG CZ C N N 36
ARG NH1 N N N 37
ARG NH2 N N N 38
ARG OXT O N N 39
ARG H H N N 40
ARG H2 H N N 41
ARG HA H N N 42
ARG HB2 H N N 43
ARG HB3 H N N 44
ARG HG2 H N N 45
ARG HG3 H N N 46
ARG HD2 H N N 47
ARG HD3 H N N 48
ARG HE H N N 49
ARG HH11 H N N 50
ARG HH12 H N N 51
ARG HH21 H N N 52
ARG HH22 H N N 53
ARG HXT H N N 54
ASN N N N N 55
ASN CA C N S 56
ASN C C N N 57
ASN O O N N 58
ASN CB C N N 59
ASN CG C N N 60
ASN OD1 O N N 61
ASN ND2 N N N 62
ASN OXT O N N 63
ASN H H N N 64
ASN H2 H N N 65
ASN HA H N N 66
ASN HB2 H N N 67
ASN HB3 H N N 68
ASN HD21 H N N 69
ASN HD22 H N N 70
ASN HXT H N N 71
ASP N N N N 72
ASP CA C N S 73
ASP C C N N 74
ASP O O N N 75
ASP CB C N N 76
ASP CG C N N 77
ASP OD1 O N N 78
ASP OD2 O N N 79
ASP OXT O N N 80
ASP H H N N 81
ASP H2 H N N 82
ASP HA H N N 83
ASP HB2 H N N 84
ASP HB3 H N N 85
ASP HD2 H N N 86
ASP HXT H N N 87
BMA C1 C N R 88
BMA C2 C N S 89
BMA C3 C N S 90
BMA C4 C N S 91
BMA C5 C N R 92
BMA C6 C N N 93
BMA O1 O N N 94
BMA O2 O N N 95
BMA O3 O N N 96
BMA O4 O N N 97
BMA O5 O N N 98
BMA O6 O N N 99
BMA H1 H N N 100
BMA H2 H N N 101
BMA H3 H N N 102
BMA H4 H N N 103
BMA H5 H N N 104
BMA H61 H N N 105
BMA H62 H N N 106
BMA HO1 H N N 107
BMA HO2 H N N 108
BMA HO3 H N N 109
BMA HO4 H N N 110
BMA HO6 H N N 111
BOG C1 C N R 112
BOG O1 O N N 113
BOG C2 C N R 114
BOG O2 O N N 115
BOG C3 C N S 116
BOG O3 O N N 117
BOG C4 C N S 118
BOG O4 O N N 119
BOG C5 C N R 120
BOG O5 O N N 121
BOG C6 C N N 122
BOG O6 O N N 123
BOG "C1'" C N N 124
BOG "C2'" C N N 125
BOG "C3'" C N N 126
BOG "C4'" C N N 127
BOG "C5'" C N N 128
BOG "C6'" C N N 129
BOG "C7'" C N N 130
BOG "C8'" C N N 131
BOG H1 H N N 132
BOG H2 H N N 133
BOG HO2 H N N 134
BOG H3 H N N 135
BOG HO3 H N N 136
BOG H4 H N N 137
BOG HO4 H N N 138
BOG H5 H N N 139
BOG H61 H N N 140
BOG H62 H N N 141
BOG HO6 H N N 142
BOG "H1'1" H N N 143
BOG "H1'2" H N N 144
BOG "H2'1" H N N 145
BOG "H2'2" H N N 146
BOG "H3'1" H N N 147
BOG "H3'2" H N N 148
BOG "H4'1" H N N 149
BOG "H4'2" H N N 150
BOG "H5'1" H N N 151
BOG "H5'2" H N N 152
BOG "H6'1" H N N 153
BOG "H6'2" H N N 154
BOG "H7'1" H N N 155
BOG "H7'2" H N N 156
BOG "H8'1" H N N 157
BOG "H8'2" H N N 158
BOG "H8'3" H N N 159
CYS N N N N 160
CYS CA C N R 161
CYS C C N N 162
CYS O O N N 163
CYS CB C N N 164
CYS SG S N N 165
CYS OXT O N N 166
CYS H H N N 167
CYS H2 H N N 168
CYS HA H N N 169
CYS HB2 H N N 170
CYS HB3 H N N 171
CYS HG H N N 172
CYS HXT H N N 173
GLN N N N N 174
GLN CA C N S 175
GLN C C N N 176
GLN O O N N 177
GLN CB C N N 178
GLN CG C N N 179
GLN CD C N N 180
GLN OE1 O N N 181
GLN NE2 N N N 182
GLN OXT O N N 183
GLN H H N N 184
GLN H2 H N N 185
GLN HA H N N 186
GLN HB2 H N N 187
GLN HB3 H N N 188
GLN HG2 H N N 189
GLN HG3 H N N 190
GLN HE21 H N N 191
GLN HE22 H N N 192
GLN HXT H N N 193
GLU N N N N 194
GLU CA C N S 195
GLU C C N N 196
GLU O O N N 197
GLU CB C N N 198
GLU CG C N N 199
GLU CD C N N 200
GLU OE1 O N N 201
GLU OE2 O N N 202
GLU OXT O N N 203
GLU H H N N 204
GLU H2 H N N 205
GLU HA H N N 206
GLU HB2 H N N 207
GLU HB3 H N N 208
GLU HG2 H N N 209
GLU HG3 H N N 210
GLU HE2 H N N 211
GLU HXT H N N 212
GLY N N N N 213
GLY CA C N N 214
GLY C C N N 215
GLY O O N N 216
GLY OXT O N N 217
GLY H H N N 218
GLY H2 H N N 219
GLY HA2 H N N 220
GLY HA3 H N N 221
GLY HXT H N N 222
HIS N N N N 223
HIS CA C N S 224
HIS C C N N 225
HIS O O N N 226
HIS CB C N N 227
HIS CG C Y N 228
HIS ND1 N Y N 229
HIS CD2 C Y N 230
HIS CE1 C Y N 231
HIS NE2 N Y N 232
HIS OXT O N N 233
HIS H H N N 234
HIS H2 H N N 235
HIS HA H N N 236
HIS HB2 H N N 237
HIS HB3 H N N 238
HIS HD1 H N N 239
HIS HD2 H N N 240
HIS HE1 H N N 241
HIS HE2 H N N 242
HIS HXT H N N 243
HOH O O N N 244
HOH H1 H N N 245
HOH H2 H N N 246
ILE N N N N 247
ILE CA C N S 248
ILE C C N N 249
ILE O O N N 250
ILE CB C N S 251
ILE CG1 C N N 252
ILE CG2 C N N 253
ILE CD1 C N N 254
ILE OXT O N N 255
ILE H H N N 256
ILE H2 H N N 257
ILE HA H N N 258
ILE HB H N N 259
ILE HG12 H N N 260
ILE HG13 H N N 261
ILE HG21 H N N 262
ILE HG22 H N N 263
ILE HG23 H N N 264
ILE HD11 H N N 265
ILE HD12 H N N 266
ILE HD13 H N N 267
ILE HXT H N N 268
LEU N N N N 269
LEU CA C N S 270
LEU C C N N 271
LEU O O N N 272
LEU CB C N N 273
LEU CG C N N 274
LEU CD1 C N N 275
LEU CD2 C N N 276
LEU OXT O N N 277
LEU H H N N 278
LEU H2 H N N 279
LEU HA H N N 280
LEU HB2 H N N 281
LEU HB3 H N N 282
LEU HG H N N 283
LEU HD11 H N N 284
LEU HD12 H N N 285
LEU HD13 H N N 286
LEU HD21 H N N 287
LEU HD22 H N N 288
LEU HD23 H N N 289
LEU HXT H N N 290
LYS N N N N 291
LYS CA C N S 292
LYS C C N N 293
LYS O O N N 294
LYS CB C N N 295
LYS CG C N N 296
LYS CD C N N 297
LYS CE C N N 298
LYS NZ N N N 299
LYS OXT O N N 300
LYS H H N N 301
LYS H2 H N N 302
LYS HA H N N 303
LYS HB2 H N N 304
LYS HB3 H N N 305
LYS HG2 H N N 306
LYS HG3 H N N 307
LYS HD2 H N N 308
LYS HD3 H N N 309
LYS HE2 H N N 310
LYS HE3 H N N 311
LYS HZ1 H N N 312
LYS HZ2 H N N 313
LYS HZ3 H N N 314
LYS HXT H N N 315
MAN C1 C N S 316
MAN C2 C N S 317
MAN C3 C N S 318
MAN C4 C N S 319
MAN C5 C N R 320
MAN C6 C N N 321
MAN O1 O N N 322
MAN O2 O N N 323
MAN O3 O N N 324
MAN O4 O N N 325
MAN O5 O N N 326
MAN O6 O N N 327
MAN H1 H N N 328
MAN H2 H N N 329
MAN H3 H N N 330
MAN H4 H N N 331
MAN H5 H N N 332
MAN H61 H N N 333
MAN H62 H N N 334
MAN HO1 H N N 335
MAN HO2 H N N 336
MAN HO3 H N N 337
MAN HO4 H N N 338
MAN HO6 H N N 339
MET N N N N 340
MET CA C N S 341
MET C C N N 342
MET O O N N 343
MET CB C N N 344
MET CG C N N 345
MET SD S N N 346
MET CE C N N 347
MET OXT O N N 348
MET H H N N 349
MET H2 H N N 350
MET HA H N N 351
MET HB2 H N N 352
MET HB3 H N N 353
MET HG2 H N N 354
MET HG3 H N N 355
MET HE1 H N N 356
MET HE2 H N N 357
MET HE3 H N N 358
MET HXT H N N 359
NAG C1 C N R 360
NAG C2 C N R 361
NAG C3 C N R 362
NAG C4 C N S 363
NAG C5 C N R 364
NAG C6 C N N 365
NAG C7 C N N 366
NAG C8 C N N 367
NAG N2 N N N 368
NAG O1 O N N 369
NAG O3 O N N 370
NAG O4 O N N 371
NAG O5 O N N 372
NAG O6 O N N 373
NAG O7 O N N 374
NAG H1 H N N 375
NAG H2 H N N 376
NAG H3 H N N 377
NAG H4 H N N 378
NAG H5 H N N 379
NAG H61 H N N 380
NAG H62 H N N 381
NAG H81 H N N 382
NAG H82 H N N 383
NAG H83 H N N 384
NAG HN2 H N N 385
NAG HO1 H N N 386
NAG HO3 H N N 387
NAG HO4 H N N 388
NAG HO6 H N N 389
PHE N N N N 390
PHE CA C N S 391
PHE C C N N 392
PHE O O N N 393
PHE CB C N N 394
PHE CG C Y N 395
PHE CD1 C Y N 396
PHE CD2 C Y N 397
PHE CE1 C Y N 398
PHE CE2 C Y N 399
PHE CZ C Y N 400
PHE OXT O N N 401
PHE H H N N 402
PHE H2 H N N 403
PHE HA H N N 404
PHE HB2 H N N 405
PHE HB3 H N N 406
PHE HD1 H N N 407
PHE HD2 H N N 408
PHE HE1 H N N 409
PHE HE2 H N N 410
PHE HZ H N N 411
PHE HXT H N N 412
PLM C1 C N N 413
PLM O1 O N N 414
PLM O2 O N N 415
PLM C2 C N N 416
PLM C3 C N N 417
PLM C4 C N N 418
PLM C5 C N N 419
PLM C6 C N N 420
PLM C7 C N N 421
PLM C8 C N N 422
PLM C9 C N N 423
PLM CA C N N 424
PLM CB C N N 425
PLM CC C N N 426
PLM CD C N N 427
PLM CE C N N 428
PLM CF C N N 429
PLM CG C N N 430
PLM H H N N 431
PLM H21 H N N 432
PLM H22 H N N 433
PLM H31 H N N 434
PLM H32 H N N 435
PLM H41 H N N 436
PLM H42 H N N 437
PLM H51 H N N 438
PLM H52 H N N 439
PLM H61 H N N 440
PLM H62 H N N 441
PLM H71 H N N 442
PLM H72 H N N 443
PLM H81 H N N 444
PLM H82 H N N 445
PLM H91 H N N 446
PLM H92 H N N 447
PLM HA1 H N N 448
PLM HA2 H N N 449
PLM HB1 H N N 450
PLM HB2 H N N 451
PLM HC1 H N N 452
PLM HC2 H N N 453
PLM HD1 H N N 454
PLM HD2 H N N 455
PLM HE1 H N N 456
PLM HE2 H N N 457
PLM HF1 H N N 458
PLM HF2 H N N 459
PLM HG1 H N N 460
PLM HG2 H N N 461
PLM HG3 H N N 462
PRO N N N N 463
PRO CA C N S 464
PRO C C N N 465
PRO O O N N 466
PRO CB C N N 467
PRO CG C N N 468
PRO CD C N N 469
PRO OXT O N N 470
PRO H H N N 471
PRO HA H N N 472
PRO HB2 H N N 473
PRO HB3 H N N 474
PRO HG2 H N N 475
PRO HG3 H N N 476
PRO HD2 H N N 477
PRO HD3 H N N 478
PRO HXT H N N 479
RET C1 C N N 480
RET C2 C N N 481
RET C3 C N N 482
RET C4 C N N 483
RET C5 C N N 484
RET C6 C N N 485
RET C7 C N N 486
RET C8 C N N 487
RET C9 C N N 488
RET C10 C N N 489
RET C11 C N N 490
RET C12 C N N 491
RET C13 C N N 492
RET C14 C N N 493
RET C15 C N N 494
RET O1 O N N 495
RET C16 C N N 496
RET C17 C N N 497
RET C18 C N N 498
RET C19 C N N 499
RET C20 C N N 500
RET H21 H N N 501
RET H22 H N N 502
RET H31 H N N 503
RET H32 H N N 504
RET H41 H N N 505
RET H42 H N N 506
RET H7 H N N 507
RET H8 H N N 508
RET H10 H N N 509
RET H11 H N N 510
RET H12 H N N 511
RET H14 H N N 512
RET H15 H N N 513
RET H161 H N N 514
RET H162 H N N 515
RET H163 H N N 516
RET H171 H N N 517
RET H172 H N N 518
RET H173 H N N 519
RET H181 H N N 520
RET H182 H N N 521
RET H183 H N N 522
RET H191 H N N 523
RET H192 H N N 524
RET H193 H N N 525
RET H201 H N N 526
RET H202 H N N 527
RET H203 H N N 528
SER N N N N 529
SER CA C N S 530
SER C C N N 531
SER O O N N 532
SER CB C N N 533
SER OG O N N 534
SER OXT O N N 535
SER H H N N 536
SER H2 H N N 537
SER HA H N N 538
SER HB2 H N N 539
SER HB3 H N N 540
SER HG H N N 541
SER HXT H N N 542
SO4 S S N N 543
SO4 O1 O N N 544
SO4 O2 O N N 545
SO4 O3 O N N 546
SO4 O4 O N N 547
THR N N N N 548
THR CA C N S 549
THR C C N N 550
THR O O N N 551
THR CB C N R 552
THR OG1 O N N 553
THR CG2 C N N 554
THR OXT O N N 555
THR H H N N 556
THR H2 H N N 557
THR HA H N N 558
THR HB H N N 559
THR HG1 H N N 560
THR HG21 H N N 561
THR HG22 H N N 562
THR HG23 H N N 563
THR HXT H N N 564
TRP N N N N 565
TRP CA C N S 566
TRP C C N N 567
TRP O O N N 568
TRP CB C N N 569
TRP CG C Y N 570
TRP CD1 C Y N 571
TRP CD2 C Y N 572
TRP NE1 N Y N 573
TRP CE2 C Y N 574
TRP CE3 C Y N 575
TRP CZ2 C Y N 576
TRP CZ3 C Y N 577
TRP CH2 C Y N 578
TRP OXT O N N 579
TRP H H N N 580
TRP H2 H N N 581
TRP HA H N N 582
TRP HB2 H N N 583
TRP HB3 H N N 584
TRP HD1 H N N 585
TRP HE1 H N N 586
TRP HE3 H N N 587
TRP HZ2 H N N 588
TRP HZ3 H N N 589
TRP HH2 H N N 590
TRP HXT H N N 591
TYR N N N N 592
TYR CA C N S 593
TYR C C N N 594
TYR O O N N 595
TYR CB C N N 596
TYR CG C Y N 597
TYR CD1 C Y N 598
TYR CD2 C Y N 599
TYR CE1 C Y N 600
TYR CE2 C Y N 601
TYR CZ C Y N 602
TYR OH O N N 603
TYR OXT O N N 604
TYR H H N N 605
TYR H2 H N N 606
TYR HA H N N 607
TYR HB2 H N N 608
TYR HB3 H N N 609
TYR HD1 H N N 610
TYR HD2 H N N 611
TYR HE1 H N N 612
TYR HE2 H N N 613
TYR HH H N N 614
TYR HXT H N N 615
VAL N N N N 616
VAL CA C N S 617
VAL C C N N 618
VAL O O N N 619
VAL CB C N N 620
VAL CG1 C N N 621
VAL CG2 C N N 622
VAL OXT O N N 623
VAL H H N N 624
VAL H2 H N N 625
VAL HA H N N 626
VAL HB H N N 627
VAL HG11 H N N 628
VAL HG12 H N N 629
VAL HG13 H N N 630
VAL HG21 H N N 631
VAL HG22 H N N 632
VAL HG23 H N N 633
VAL HXT H N N 634
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ACE C O doub N N 1
ACE C CH3 sing N N 2
ACE C H sing N N 3
ACE CH3 H1 sing N N 4
ACE CH3 H2 sing N N 5
ACE CH3 H3 sing N N 6
ACT C O doub N N 7
ACT C OXT sing N N 8
ACT C CH3 sing N N 9
ACT CH3 H1 sing N N 10
ACT CH3 H2 sing N N 11
ACT CH3 H3 sing N N 12
ALA N CA sing N N 13
ALA N H sing N N 14
ALA N H2 sing N N 15
ALA CA C sing N N 16
ALA CA CB sing N N 17
ALA CA HA sing N N 18
ALA C O doub N N 19
ALA C OXT sing N N 20
ALA CB HB1 sing N N 21
ALA CB HB2 sing N N 22
ALA CB HB3 sing N N 23
ALA OXT HXT sing N N 24
ARG N CA sing N N 25
ARG N H sing N N 26
ARG N H2 sing N N 27
ARG CA C sing N N 28
ARG CA CB sing N N 29
ARG CA HA sing N N 30
ARG C O doub N N 31
ARG C OXT sing N N 32
ARG CB CG sing N N 33
ARG CB HB2 sing N N 34
ARG CB HB3 sing N N 35
ARG CG CD sing N N 36
ARG CG HG2 sing N N 37
ARG CG HG3 sing N N 38
ARG CD NE sing N N 39
ARG CD HD2 sing N N 40
ARG CD HD3 sing N N 41
ARG NE CZ sing N N 42
ARG NE HE sing N N 43
ARG CZ NH1 sing N N 44
ARG CZ NH2 doub N N 45
ARG NH1 HH11 sing N N 46
ARG NH1 HH12 sing N N 47
ARG NH2 HH21 sing N N 48
ARG NH2 HH22 sing N N 49
ARG OXT HXT sing N N 50
ASN N CA sing N N 51
ASN N H sing N N 52
ASN N H2 sing N N 53
ASN CA C sing N N 54
ASN CA CB sing N N 55
ASN CA HA sing N N 56
ASN C O doub N N 57
ASN C OXT sing N N 58
ASN CB CG sing N N 59
ASN CB HB2 sing N N 60
ASN CB HB3 sing N N 61
ASN CG OD1 doub N N 62
ASN CG ND2 sing N N 63
ASN ND2 HD21 sing N N 64
ASN ND2 HD22 sing N N 65
ASN OXT HXT sing N N 66
ASP N CA sing N N 67
ASP N H sing N N 68
ASP N H2 sing N N 69
ASP CA C sing N N 70
ASP CA CB sing N N 71
ASP CA HA sing N N 72
ASP C O doub N N 73
ASP C OXT sing N N 74
ASP CB CG sing N N 75
ASP CB HB2 sing N N 76
ASP CB HB3 sing N N 77
ASP CG OD1 doub N N 78
ASP CG OD2 sing N N 79
ASP OD2 HD2 sing N N 80
ASP OXT HXT sing N N 81
BMA C1 C2 sing N N 82
BMA C1 O1 sing N N 83
BMA C1 O5 sing N N 84
BMA C1 H1 sing N N 85
BMA C2 C3 sing N N 86
BMA C2 O2 sing N N 87
BMA C2 H2 sing N N 88
BMA C3 C4 sing N N 89
BMA C3 O3 sing N N 90
BMA C3 H3 sing N N 91
BMA C4 C5 sing N N 92
BMA C4 O4 sing N N 93
BMA C4 H4 sing N N 94
BMA C5 C6 sing N N 95
BMA C5 O5 sing N N 96
BMA C5 H5 sing N N 97
BMA C6 O6 sing N N 98
BMA C6 H61 sing N N 99
BMA C6 H62 sing N N 100
BMA O1 HO1 sing N N 101
BMA O2 HO2 sing N N 102
BMA O3 HO3 sing N N 103
BMA O4 HO4 sing N N 104
BMA O6 HO6 sing N N 105
BOG C1 O1 sing N N 106
BOG C1 C2 sing N N 107
BOG C1 O5 sing N N 108
BOG C1 H1 sing N N 109
BOG O1 "C1'" sing N N 110
BOG C2 O2 sing N N 111
BOG C2 C3 sing N N 112
BOG C2 H2 sing N N 113
BOG O2 HO2 sing N N 114
BOG C3 O3 sing N N 115
BOG C3 C4 sing N N 116
BOG C3 H3 sing N N 117
BOG O3 HO3 sing N N 118
BOG C4 O4 sing N N 119
BOG C4 C5 sing N N 120
BOG C4 H4 sing N N 121
BOG O4 HO4 sing N N 122
BOG C5 O5 sing N N 123
BOG C5 C6 sing N N 124
BOG C5 H5 sing N N 125
BOG C6 O6 sing N N 126
BOG C6 H61 sing N N 127
BOG C6 H62 sing N N 128
BOG O6 HO6 sing N N 129
BOG "C1'" "C2'" sing N N 130
BOG "C1'" "H1'1" sing N N 131
BOG "C1'" "H1'2" sing N N 132
BOG "C2'" "C3'" sing N N 133
BOG "C2'" "H2'1" sing N N 134
BOG "C2'" "H2'2" sing N N 135
BOG "C3'" "C4'" sing N N 136
BOG "C3'" "H3'1" sing N N 137
BOG "C3'" "H3'2" sing N N 138
BOG "C4'" "C5'" sing N N 139
BOG "C4'" "H4'1" sing N N 140
BOG "C4'" "H4'2" sing N N 141
BOG "C5'" "C6'" sing N N 142
BOG "C5'" "H5'1" sing N N 143
BOG "C5'" "H5'2" sing N N 144
BOG "C6'" "C7'" sing N N 145
BOG "C6'" "H6'1" sing N N 146
BOG "C6'" "H6'2" sing N N 147
BOG "C7'" "C8'" sing N N 148
BOG "C7'" "H7'1" sing N N 149
BOG "C7'" "H7'2" sing N N 150
BOG "C8'" "H8'1" sing N N 151
BOG "C8'" "H8'2" sing N N 152
BOG "C8'" "H8'3" sing N N 153
CYS N CA sing N N 154
CYS N H sing N N 155
CYS N H2 sing N N 156
CYS CA C sing N N 157
CYS CA CB sing N N 158
CYS CA HA sing N N 159
CYS C O doub N N 160
CYS C OXT sing N N 161
CYS CB SG sing N N 162
CYS CB HB2 sing N N 163
CYS CB HB3 sing N N 164
CYS SG HG sing N N 165
CYS OXT HXT sing N N 166
GLN N CA sing N N 167
GLN N H sing N N 168
GLN N H2 sing N N 169
GLN CA C sing N N 170
GLN CA CB sing N N 171
GLN CA HA sing N N 172
GLN C O doub N N 173
GLN C OXT sing N N 174
GLN CB CG sing N N 175
GLN CB HB2 sing N N 176
GLN CB HB3 sing N N 177
GLN CG CD sing N N 178
GLN CG HG2 sing N N 179
GLN CG HG3 sing N N 180
GLN CD OE1 doub N N 181
GLN CD NE2 sing N N 182
GLN NE2 HE21 sing N N 183
GLN NE2 HE22 sing N N 184
GLN OXT HXT sing N N 185
GLU N CA sing N N 186
GLU N H sing N N 187
GLU N H2 sing N N 188
GLU CA C sing N N 189
GLU CA CB sing N N 190
GLU CA HA sing N N 191
GLU C O doub N N 192
GLU C OXT sing N N 193
GLU CB CG sing N N 194
GLU CB HB2 sing N N 195
GLU CB HB3 sing N N 196
GLU CG CD sing N N 197
GLU CG HG2 sing N N 198
GLU CG HG3 sing N N 199
GLU CD OE1 doub N N 200
GLU CD OE2 sing N N 201
GLU OE2 HE2 sing N N 202
GLU OXT HXT sing N N 203
GLY N CA sing N N 204
GLY N H sing N N 205
GLY N H2 sing N N 206
GLY CA C sing N N 207
GLY CA HA2 sing N N 208
GLY CA HA3 sing N N 209
GLY C O doub N N 210
GLY C OXT sing N N 211
GLY OXT HXT sing N N 212
HIS N CA sing N N 213
HIS N H sing N N 214
HIS N H2 sing N N 215
HIS CA C sing N N 216
HIS CA CB sing N N 217
HIS CA HA sing N N 218
HIS C O doub N N 219
HIS C OXT sing N N 220
HIS CB CG sing N N 221
HIS CB HB2 sing N N 222
HIS CB HB3 sing N N 223
HIS CG ND1 sing Y N 224
HIS CG CD2 doub Y N 225
HIS ND1 CE1 doub Y N 226
HIS ND1 HD1 sing N N 227
HIS CD2 NE2 sing Y N 228
HIS CD2 HD2 sing N N 229
HIS CE1 NE2 sing Y N 230
HIS CE1 HE1 sing N N 231
HIS NE2 HE2 sing N N 232
HIS OXT HXT sing N N 233
HOH O H1 sing N N 234
HOH O H2 sing N N 235
ILE N CA sing N N 236
ILE N H sing N N 237
ILE N H2 sing N N 238
ILE CA C sing N N 239
ILE CA CB sing N N 240
ILE CA HA sing N N 241
ILE C O doub N N 242
ILE C OXT sing N N 243
ILE CB CG1 sing N N 244
ILE CB CG2 sing N N 245
ILE CB HB sing N N 246
ILE CG1 CD1 sing N N 247
ILE CG1 HG12 sing N N 248
ILE CG1 HG13 sing N N 249
ILE CG2 HG21 sing N N 250
ILE CG2 HG22 sing N N 251
ILE CG2 HG23 sing N N 252
ILE CD1 HD11 sing N N 253
ILE CD1 HD12 sing N N 254
ILE CD1 HD13 sing N N 255
ILE OXT HXT sing N N 256
LEU N CA sing N N 257
LEU N H sing N N 258
LEU N H2 sing N N 259
LEU CA C sing N N 260
LEU CA CB sing N N 261
LEU CA HA sing N N 262
LEU C O doub N N 263
LEU C OXT sing N N 264
LEU CB CG sing N N 265
LEU CB HB2 sing N N 266
LEU CB HB3 sing N N 267
LEU CG CD1 sing N N 268
LEU CG CD2 sing N N 269
LEU CG HG sing N N 270
LEU CD1 HD11 sing N N 271
LEU CD1 HD12 sing N N 272
LEU CD1 HD13 sing N N 273
LEU CD2 HD21 sing N N 274
LEU CD2 HD22 sing N N 275
LEU CD2 HD23 sing N N 276
LEU OXT HXT sing N N 277
LYS N CA sing N N 278
LYS N H sing N N 279
LYS N H2 sing N N 280
LYS CA C sing N N 281
LYS CA CB sing N N 282
LYS CA HA sing N N 283
LYS C O doub N N 284
LYS C OXT sing N N 285
LYS CB CG sing N N 286
LYS CB HB2 sing N N 287
LYS CB HB3 sing N N 288
LYS CG CD sing N N 289
LYS CG HG2 sing N N 290
LYS CG HG3 sing N N 291
LYS CD CE sing N N 292
LYS CD HD2 sing N N 293
LYS CD HD3 sing N N 294
LYS CE NZ sing N N 295
LYS CE HE2 sing N N 296
LYS CE HE3 sing N N 297
LYS NZ HZ1 sing N N 298
LYS NZ HZ2 sing N N 299
LYS NZ HZ3 sing N N 300
LYS OXT HXT sing N N 301
MAN C1 C2 sing N N 302
MAN C1 O1 sing N N 303
MAN C1 O5 sing N N 304
MAN C1 H1 sing N N 305
MAN C2 C3 sing N N 306
MAN C2 O2 sing N N 307
MAN C2 H2 sing N N 308
MAN C3 C4 sing N N 309
MAN C3 O3 sing N N 310
MAN C3 H3 sing N N 311
MAN C4 C5 sing N N 312
MAN C4 O4 sing N N 313
MAN C4 H4 sing N N 314
MAN C5 C6 sing N N 315
MAN C5 O5 sing N N 316
MAN C5 H5 sing N N 317
MAN C6 O6 sing N N 318
MAN C6 H61 sing N N 319
MAN C6 H62 sing N N 320
MAN O1 HO1 sing N N 321
MAN O2 HO2 sing N N 322
MAN O3 HO3 sing N N 323
MAN O4 HO4 sing N N 324
MAN O6 HO6 sing N N 325
MET N CA sing N N 326
MET N H sing N N 327
MET N H2 sing N N 328
MET CA C sing N N 329
MET CA CB sing N N 330
MET CA HA sing N N 331
MET C O doub N N 332
MET C OXT sing N N 333
MET CB CG sing N N 334
MET CB HB2 sing N N 335
MET CB HB3 sing N N 336
MET CG SD sing N N 337
MET CG HG2 sing N N 338
MET CG HG3 sing N N 339
MET SD CE sing N N 340
MET CE HE1 sing N N 341
MET CE HE2 sing N N 342
MET CE HE3 sing N N 343
MET OXT HXT sing N N 344
NAG C1 C2 sing N N 345
NAG C1 O1 sing N N 346
NAG C1 O5 sing N N 347
NAG C1 H1 sing N N 348
NAG C2 C3 sing N N 349
NAG C2 N2 sing N N 350
NAG C2 H2 sing N N 351
NAG C3 C4 sing N N 352
NAG C3 O3 sing N N 353
NAG C3 H3 sing N N 354
NAG C4 C5 sing N N 355
NAG C4 O4 sing N N 356
NAG C4 H4 sing N N 357
NAG C5 C6 sing N N 358
NAG C5 O5 sing N N 359
NAG C5 H5 sing N N 360
NAG C6 O6 sing N N 361
NAG C6 H61 sing N N 362
NAG C6 H62 sing N N 363
NAG C7 C8 sing N N 364
NAG C7 N2 sing N N 365
NAG C7 O7 doub N N 366
NAG C8 H81 sing N N 367
NAG C8 H82 sing N N 368
NAG C8 H83 sing N N 369
NAG N2 HN2 sing N N 370
NAG O1 HO1 sing N N 371
NAG O3 HO3 sing N N 372
NAG O4 HO4 sing N N 373
NAG O6 HO6 sing N N 374
PHE N CA sing N N 375
PHE N H sing N N 376
PHE N H2 sing N N 377
PHE CA C sing N N 378
PHE CA CB sing N N 379
PHE CA HA sing N N 380
PHE C O doub N N 381
PHE C OXT sing N N 382
PHE CB CG sing N N 383
PHE CB HB2 sing N N 384
PHE CB HB3 sing N N 385
PHE CG CD1 doub Y N 386
PHE CG CD2 sing Y N 387
PHE CD1 CE1 sing Y N 388
PHE CD1 HD1 sing N N 389
PHE CD2 CE2 doub Y N 390
PHE CD2 HD2 sing N N 391
PHE CE1 CZ doub Y N 392
PHE CE1 HE1 sing N N 393
PHE CE2 CZ sing Y N 394
PHE CE2 HE2 sing N N 395
PHE CZ HZ sing N N 396
PHE OXT HXT sing N N 397
PLM C1 O1 sing N N 398
PLM C1 O2 doub N N 399
PLM C1 C2 sing N N 400
PLM O1 H sing N N 401
PLM C2 C3 sing N N 402
PLM C2 H21 sing N N 403
PLM C2 H22 sing N N 404
PLM C3 C4 sing N N 405
PLM C3 H31 sing N N 406
PLM C3 H32 sing N N 407
PLM C4 C5 sing N N 408
PLM C4 H41 sing N N 409
PLM C4 H42 sing N N 410
PLM C5 C6 sing N N 411
PLM C5 H51 sing N N 412
PLM C5 H52 sing N N 413
PLM C6 C7 sing N N 414
PLM C6 H61 sing N N 415
PLM C6 H62 sing N N 416
PLM C7 C8 sing N N 417
PLM C7 H71 sing N N 418
PLM C7 H72 sing N N 419
PLM C8 C9 sing N N 420
PLM C8 H81 sing N N 421
PLM C8 H82 sing N N 422
PLM C9 CA sing N N 423
PLM C9 H91 sing N N 424
PLM C9 H92 sing N N 425
PLM CA CB sing N N 426
PLM CA HA1 sing N N 427
PLM CA HA2 sing N N 428
PLM CB CC sing N N 429
PLM CB HB1 sing N N 430
PLM CB HB2 sing N N 431
PLM CC CD sing N N 432
PLM CC HC1 sing N N 433
PLM CC HC2 sing N N 434
PLM CD CE sing N N 435
PLM CD HD1 sing N N 436
PLM CD HD2 sing N N 437
PLM CE CF sing N N 438
PLM CE HE1 sing N N 439
PLM CE HE2 sing N N 440
PLM CF CG sing N N 441
PLM CF HF1 sing N N 442
PLM CF HF2 sing N N 443
PLM CG HG1 sing N N 444
PLM CG HG2 sing N N 445
PLM CG HG3 sing N N 446
PRO N CA sing N N 447
PRO N CD sing N N 448
PRO N H sing N N 449
PRO CA C sing N N 450
PRO CA CB sing N N 451
PRO CA HA sing N N 452
PRO C O doub N N 453
PRO C OXT sing N N 454
PRO CB CG sing N N 455
PRO CB HB2 sing N N 456
PRO CB HB3 sing N N 457
PRO CG CD sing N N 458
PRO CG HG2 sing N N 459
PRO CG HG3 sing N N 460
PRO CD HD2 sing N N 461
PRO CD HD3 sing N N 462
PRO OXT HXT sing N N 463
RET C1 C2 sing N N 464
RET C1 C6 sing N N 465
RET C1 C16 sing N N 466
RET C1 C17 sing N N 467
RET C2 C3 sing N N 468
RET C2 H21 sing N N 469
RET C2 H22 sing N N 470
RET C3 C4 sing N N 471
RET C3 H31 sing N N 472
RET C3 H32 sing N N 473
RET C4 C5 sing N N 474
RET C4 H41 sing N N 475
RET C4 H42 sing N N 476
RET C5 C6 doub N N 477
RET C5 C18 sing N N 478
RET C6 C7 sing N N 479
RET C7 C8 doub N E 480
RET C7 H7 sing N N 481
RET C8 C9 sing N N 482
RET C8 H8 sing N N 483
RET C9 C10 doub N E 484
RET C9 C19 sing N N 485
RET C10 C11 sing N N 486
RET C10 H10 sing N N 487
RET C11 C12 doub N E 488
RET C11 H11 sing N N 489
RET C12 C13 sing N N 490
RET C12 H12 sing N N 491
RET C13 C14 doub N E 492
RET C13 C20 sing N N 493
RET C14 C15 sing N N 494
RET C14 H14 sing N N 495
RET C15 O1 doub N N 496
RET C15 H15 sing N N 497
RET C16 H161 sing N N 498
RET C16 H162 sing N N 499
RET C16 H163 sing N N 500
RET C17 H171 sing N N 501
RET C17 H172 sing N N 502
RET C17 H173 sing N N 503
RET C18 H181 sing N N 504
RET C18 H182 sing N N 505
RET C18 H183 sing N N 506
RET C19 H191 sing N N 507
RET C19 H192 sing N N 508
RET C19 H193 sing N N 509
RET C20 H201 sing N N 510
RET C20 H202 sing N N 511
RET C20 H203 sing N N 512
SER N CA sing N N 513
SER N H sing N N 514
SER N H2 sing N N 515
SER CA C sing N N 516
SER CA CB sing N N 517
SER CA HA sing N N 518
SER C O doub N N 519
SER C OXT sing N N 520
SER CB OG sing N N 521
SER CB HB2 sing N N 522
SER CB HB3 sing N N 523
SER OG HG sing N N 524
SER OXT HXT sing N N 525
SO4 S O1 doub N N 526
SO4 S O2 doub N N 527
SO4 S O3 sing N N 528
SO4 S O4 sing N N 529
THR N CA sing N N 530
THR N H sing N N 531
THR N H2 sing N N 532
THR CA C sing N N 533
THR CA CB sing N N 534
THR CA HA sing N N 535
THR C O doub N N 536
THR C OXT sing N N 537
THR CB OG1 sing N N 538
THR CB CG2 sing N N 539
THR CB HB sing N N 540
THR OG1 HG1 sing N N 541
THR CG2 HG21 sing N N 542
THR CG2 HG22 sing N N 543
THR CG2 HG23 sing N N 544
THR OXT HXT sing N N 545
TRP N CA sing N N 546
TRP N H sing N N 547
TRP N H2 sing N N 548
TRP CA C sing N N 549
TRP CA CB sing N N 550
TRP CA HA sing N N 551
TRP C O doub N N 552
TRP C OXT sing N N 553
TRP CB CG sing N N 554
TRP CB HB2 sing N N 555
TRP CB HB3 sing N N 556
TRP CG CD1 doub Y N 557
TRP CG CD2 sing Y N 558
TRP CD1 NE1 sing Y N 559
TRP CD1 HD1 sing N N 560
TRP CD2 CE2 doub Y N 561
TRP CD2 CE3 sing Y N 562
TRP NE1 CE2 sing Y N 563
TRP NE1 HE1 sing N N 564
TRP CE2 CZ2 sing Y N 565
TRP CE3 CZ3 doub Y N 566
TRP CE3 HE3 sing N N 567
TRP CZ2 CH2 doub Y N 568
TRP CZ2 HZ2 sing N N 569
TRP CZ3 CH2 sing Y N 570
TRP CZ3 HZ3 sing N N 571
TRP CH2 HH2 sing N N 572
TRP OXT HXT sing N N 573
TYR N CA sing N N 574
TYR N H sing N N 575
TYR N H2 sing N N 576
TYR CA C sing N N 577
TYR CA CB sing N N 578
TYR CA HA sing N N 579
TYR C O doub N N 580
TYR C OXT sing N N 581
TYR CB CG sing N N 582
TYR CB HB2 sing N N 583
TYR CB HB3 sing N N 584
TYR CG CD1 doub Y N 585
TYR CG CD2 sing Y N 586
TYR CD1 CE1 sing Y N 587
TYR CD1 HD1 sing N N 588
TYR CD2 CE2 doub Y N 589
TYR CD2 HD2 sing N N 590
TYR CE1 CZ doub Y N 591
TYR CE1 HE1 sing N N 592
TYR CE2 CZ sing Y N 593
TYR CE2 HE2 sing N N 594
TYR CZ OH sing N N 595
TYR OH HH sing N N 596
TYR OXT HXT sing N N 597
VAL N CA sing N N 598
VAL N H sing N N 599
VAL N H2 sing N N 600
VAL CA C sing N N 601
VAL CA CB sing N N 602
VAL CA HA sing N N 603
VAL C O doub N N 604
VAL C OXT sing N N 605
VAL CB CG1 sing N N 606
VAL CB CG2 sing N N 607
VAL CB HB sing N N 608
VAL CG1 HG11 sing N N 609
VAL CG1 HG12 sing N N 610
VAL CG1 HG13 sing N N 611
VAL CG2 HG21 sing N N 612
VAL CG2 HG22 sing N N 613
VAL CG2 HG23 sing N N 614
VAL OXT HXT sing N N 615
#
_pdbx_audit_support.funding_organization ?
_pdbx_audit_support.country Switzerland
_pdbx_audit_support.grant_number ?
_pdbx_audit_support.ordinal 1
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 NAG 1 n
2 NAG 2 n
2 BMA 3 n
2 MAN 4 n
2 BMA 5 n
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 4A4M
_pdbx_initial_refinement_model.details ?
#
_atom_sites.entry_id 5DYS
_atom_sites.fract_transf_matrix[1][1] 0.004127
_atom_sites.fract_transf_matrix[1][2] 0.002383
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.004766
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.008924
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_