HEADER TRANSFERASE 29-SEP-15 5E0Y TITLE CRYSTAL STRUCTURE OF PASTA DOMAIN 4 OF MYCOBACTERIUM TUBERCULOSIS TITLE 2 PROTEIN KINASE B COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PKNB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 558-626; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 GENE: PKNB, RV0014C, MTCY10H4.14C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, EXTRACELLULAR SENSOR DOMAIN, PEPTIDOGLYCAN BINDING, KEYWDS 2 STRUCTURAL GENOMICS, TB STRUCTURAL GENOMICS CONSORTIUM, TBSGC, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.M.PRIGOZHIN,TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC) REVDAT 6 06-MAR-24 5E0Y 1 LINK REVDAT 5 25-DEC-19 5E0Y 1 REMARK REVDAT 4 13-SEP-17 5E0Y 1 JRNL REMARK REVDAT 3 09-NOV-16 5E0Y 1 JRNL REVDAT 2 21-SEP-16 5E0Y 1 JRNL REVDAT 1 14-SEP-16 5E0Y 0 JRNL AUTH D.M.PRIGOZHIN,K.G.PAPAVINASASUNDARAM,C.E.BAER,K.C.MURPHY, JRNL AUTH 2 A.MOSKALEVA,T.Y.CHEN,T.ALBER,C.M.SASSETTI JRNL TITL STRUCTURAL AND GENETIC ANALYSES OF THE MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS PROTEIN KINASE B SENSOR DOMAIN IDENTIFY A JRNL TITL 3 POTENTIAL LIGAND-BINDING SITE. JRNL REF J.BIOL.CHEM. V. 291 22961 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27601474 JRNL DOI 10.1074/JBC.M116.731760 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 4342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.6128 - 2.8858 1.00 1510 168 0.2034 0.2463 REMARK 3 2 2.8858 - 2.2907 1.00 1384 154 0.2305 0.2822 REMARK 3 3 2.2907 - 2.0012 0.75 1012 114 0.2359 0.3013 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 565 REMARK 3 ANGLE : 0.908 772 REMARK 3 CHIRALITY : 0.034 78 REMARK 3 PLANARITY : 0.005 107 REMARK 3 DIHEDRAL : 15.037 206 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-15. REMARK 100 THE DEPOSITION ID IS D_1000214028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2824 REMARK 200 MONOCHROMATOR : DOUBLE FLAT CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4409 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : 15.30 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 44.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.36200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M ZINC ACETATE, 0.1 M IMIDAZOLE PH REMARK 280 8, AND 20% PEG 3000, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.67800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.83900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.25850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.41950 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 102.09750 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.67800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.83900 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 20.41950 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 61.25850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 102.09750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -147.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 701 LIES ON A SPECIAL POSITION. REMARK 375 ZN ZN A 702 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 832 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 555 REMARK 465 HIS A 556 REMARK 465 MET A 557 REMARK 465 GLY A 558 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 808 O HOH A 847 8566 1.94 REMARK 500 O HOH A 837 O HOH A 841 10666 2.13 REMARK 500 O HOH A 837 O HOH A 843 10666 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 703 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 573 OD1 REMARK 620 2 HOH A 845 O 100.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 575 OE2 REMARK 620 2 GLU A 575 OE1 52.2 REMARK 620 3 GLU A 575 OE2 0.0 52.2 REMARK 620 4 HOH A 837 O 101.6 153.1 101.6 REMARK 620 5 HOH A 837 O 113.5 105.9 113.5 89.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 707 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 589 NZ REMARK 620 2 HOH A 810 O 166.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 704 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 594 OD1 REMARK 620 2 ASP A 594 OD2 61.9 REMARK 620 3 TYR A 605 OH 30.4 53.7 REMARK 620 4 HOH A 836 O 135.1 88.9 105.0 REMARK 620 5 HOH A 844 O 99.1 89.2 124.6 114.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 600 ND1 REMARK 620 2 HIS A 600 ND1 0.0 REMARK 620 3 GLN A 626 O 90.6 90.6 REMARK 620 4 GLN A 626 OXT 104.8 104.8 51.6 REMARK 620 5 GLN A 626 O 90.6 90.6 0.0 51.6 REMARK 620 6 GLN A 626 OXT 104.8 104.8 51.6 0.0 51.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 708 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 810 O REMARK 620 2 HOH A 844 O 89.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 708 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OUV RELATED DB: PDB REMARK 900 3OUV CONTAINS A RELATED STRUCTURE TO BE PUBLISHED TOGETHER WITH REMARK 900 THIS DEPOSITION REMARK 900 RELATED ID: 5E0Z RELATED DB: PDB REMARK 900 RELATED ID: 5E10 RELATED DB: PDB REMARK 900 RELATED ID: 5E12 RELATED DB: PDB DBREF 5E0Y A 558 626 UNP P9WI81 PKNB_MYCTU 558 626 SEQADV 5E0Y GLY A 555 UNP P9WI81 EXPRESSION TAG SEQADV 5E0Y HIS A 556 UNP P9WI81 EXPRESSION TAG SEQADV 5E0Y MET A 557 UNP P9WI81 EXPRESSION TAG SEQRES 1 A 72 GLY HIS MET GLY ASN GLN PHE VAL MET PRO ASP LEU SER SEQRES 2 A 72 GLY MET PHE TRP VAL ASP ALA GLU PRO ARG LEU ARG ALA SEQRES 3 A 72 LEU GLY TRP THR GLY MET LEU ASP LYS GLY ALA ASP VAL SEQRES 4 A 72 ASP ALA GLY GLY SER GLN HIS ASN ARG VAL VAL TYR GLN SEQRES 5 A 72 ASN PRO PRO ALA GLY THR GLY VAL ASN ARG ASP GLY ILE SEQRES 6 A 72 ILE THR LEU ARG PHE GLY GLN HET ZN A 701 1 HET ZN A 702 1 HET ZN A 703 1 HET ZN A 704 1 HET ZN A 705 2 HET ZN A 706 1 HET ZN A 707 1 HET ZN A 708 1 HETNAM ZN ZINC ION FORMUL 2 ZN 8(ZN 2+) FORMUL 10 HOH *50(H2 O) HELIX 1 AA1 PHE A 570 LEU A 581 1 12 HELIX 2 AA2 GLY A 596 HIS A 600 5 5 SHEET 1 AA1 2 PHE A 561 VAL A 562 0 SHEET 2 AA1 2 GLY A 613 VAL A 614 -1 O VAL A 614 N PHE A 561 SHEET 1 AA2 3 LEU A 587 LYS A 589 0 SHEET 2 AA2 3 ILE A 620 PHE A 624 1 O ILE A 620 N ASP A 588 SHEET 3 AA2 3 VAL A 603 ASN A 607 -1 N VAL A 604 O ARG A 623 LINK OD1 ASP A 573 ZN ZN A 703 1555 1555 2.24 LINK OE2 GLU A 575 ZN ZN A 702 1555 1555 2.01 LINK OE1 GLU A 575 ZN ZN A 702 1555 10666 2.66 LINK OE2 GLU A 575 ZN ZN A 702 1555 10666 2.02 LINK NZ LYS A 589 ZN ZN A 707 1555 1555 2.53 LINK OD1 ASP A 594 ZN ZN A 704 1555 1555 2.10 LINK OD2 ASP A 594 ZN ZN A 704 1555 1555 2.18 LINK ND1 HIS A 600 ZN ZN A 701 1555 1555 2.12 LINK ND1 HIS A 600 ZN ZN A 701 1555 10776 2.34 LINK OH BTYR A 605 ZN ZN A 704 1555 8676 2.00 LINK O GLN A 626 ZN ZN A 701 1555 1555 2.59 LINK OXT GLN A 626 ZN ZN A 701 1555 1555 2.18 LINK O GLN A 626 ZN ZN A 701 1555 10776 2.68 LINK OXT GLN A 626 ZN ZN A 701 1555 10776 2.11 LINK ZN ZN A 702 O HOH A 837 1555 1555 2.07 LINK ZN ZN A 702 O HOH A 837 1555 10666 2.22 LINK ZN ZN A 703 O HOH A 845 1555 5565 2.14 LINK ZN ZN A 704 O HOH A 836 1555 8676 2.44 LINK ZN ZN A 704 O HOH A 844 1555 1555 2.57 LINK ZN ZN A 707 O HOH A 810 1555 1555 2.07 LINK ZN ZN A 708 O HOH A 810 1555 1555 2.12 LINK ZN ZN A 708 O HOH A 844 1555 10776 2.19 CISPEP 1 ASN A 607 PRO A 608 0 1.81 SITE 1 AC1 2 HIS A 600 GLN A 626 SITE 1 AC2 3 GLU A 575 HOH A 837 HOH A 841 SITE 1 AC3 2 ASP A 573 HOH A 845 SITE 1 AC4 6 ASP A 594 HIS A 600 TYR A 605 ZN A 705 SITE 2 AC4 6 HOH A 836 HOH A 844 SITE 1 AC5 6 VAL A 593 ASP A 594 HIS A 600 TYR A 605 SITE 2 AC5 6 ZN A 704 ZN A 706 SITE 1 AC6 5 GLY A 597 HIS A 600 TYR A 605 ZN A 705 SITE 2 AC6 5 HOH A 820 SITE 1 AC7 4 LYS A 589 ASP A 592 ZN A 708 HOH A 810 SITE 1 AC8 7 ASP A 592 ASN A 601 GLY A 625 GLN A 626 SITE 2 AC8 7 ZN A 707 HOH A 810 HOH A 844 CRYST1 41.658 41.658 122.517 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024005 0.013859 0.000000 0.00000 SCALE2 0.000000 0.027719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008162 0.00000