HEADER TRANSCRIPTION 29-SEP-15 5E15 TITLE CRYSTAL STRUCTURE OF THE ER-ALPHA LIGAND-BINDING DOMAIN IN COMPLEX TITLE 2 WITH THE CYCLOFENIL DERIVATIVE 4,4'-{[4-(2-HYDROXYETHYL) TITLE 3 CYCLOHEXYLIDENE]METHANEDIYL}DIPHENOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN; COMPND 5 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 6 GROUP A MEMBER 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 11 CHAIN: C, D; COMPND 12 FRAGMENT: NUCLEAR RECEPTOR-INTERACTING PEPTIDE; COMPND 13 SYNONYM: NCOA-2,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 75,BHLHE75, COMPND 14 TRANSCRIPTIONAL INTERMEDIARY FACTOR 2,HTIF2; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, LIGAND BINDING, PROTEIN- KEYWDS 2 LIGAND COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.C.NWACHUKWU,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG,Z.LIAO, AUTHOR 2 V.CAVETT,J.NOWAK,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN,O.ELEMENTO, AUTHOR 3 J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES REVDAT 2 27-SEP-23 5E15 1 REMARK REVDAT 1 04-MAY-16 5E15 0 JRNL AUTH J.C.NWACHUKWU,S.SRINIVASAN,Y.ZHENG,S.WANG,J.MIN,C.DONG, JRNL AUTH 2 Z.LIAO,J.NOWAK,N.J.WRIGHT,R.HOUTMAN,K.E.CARLSON,J.S.JOSAN, JRNL AUTH 3 O.ELEMENTO,J.A.KATZENELLENBOGEN,H.B.ZHOU,K.W.NETTLES JRNL TITL PREDICTIVE FEATURES OF LIGAND-SPECIFIC SIGNALING THROUGH THE JRNL TITL 2 ESTROGEN RECEPTOR. JRNL REF MOL.SYST.BIOL. V. 12 864 2016 JRNL REFN ESSN 1744-4292 JRNL PMID 27107013 JRNL DOI 10.15252/MSB.20156701 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 22510 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.370 REMARK 3 FREE R VALUE TEST SET COUNT : 1885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1264 - 4.9424 0.95 1682 155 0.2008 0.2402 REMARK 3 2 4.9424 - 3.9237 0.94 1626 148 0.1777 0.1922 REMARK 3 3 3.9237 - 3.4279 0.98 1696 156 0.1911 0.1951 REMARK 3 4 3.4279 - 3.1145 0.98 1676 155 0.2155 0.2426 REMARK 3 5 3.1145 - 2.8914 0.97 1676 150 0.2275 0.2612 REMARK 3 6 2.8914 - 2.7209 0.93 1599 145 0.2270 0.2728 REMARK 3 7 2.7209 - 2.5847 0.94 1609 145 0.2365 0.2550 REMARK 3 8 2.5847 - 2.4722 0.94 1611 147 0.2318 0.2981 REMARK 3 9 2.4722 - 2.3770 0.92 1583 147 0.2425 0.2954 REMARK 3 10 2.3770 - 2.2950 0.91 1552 142 0.2417 0.2911 REMARK 3 11 2.2950 - 2.2232 0.89 1513 145 0.2540 0.2936 REMARK 3 12 2.2232 - 2.1597 0.85 1462 132 0.2589 0.3188 REMARK 3 13 2.1597 - 2.1028 0.78 1340 118 0.2760 0.2933 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3814 REMARK 3 ANGLE : 0.744 5158 REMARK 3 CHIRALITY : 0.025 620 REMARK 3 PLANARITY : 0.003 633 REMARK 3 DIHEDRAL : 14.663 1405 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 321 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1402 0.7751 30.4019 REMARK 3 T TENSOR REMARK 3 T11: 0.4218 T22: 0.4019 REMARK 3 T33: 0.4048 T12: -0.0457 REMARK 3 T13: 0.0407 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 2.8129 L22: 6.1287 REMARK 3 L33: 4.1544 L12: 2.8057 REMARK 3 L13: 0.2838 L23: 1.3559 REMARK 3 S TENSOR REMARK 3 S11: 0.2242 S12: -0.3302 S13: 0.4788 REMARK 3 S21: 0.3964 S22: 0.0207 S23: 0.1363 REMARK 3 S31: -0.5609 S32: 0.4241 S33: -0.1852 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5211 -18.9973 33.0199 REMARK 3 T TENSOR REMARK 3 T11: 0.4681 T22: 0.3751 REMARK 3 T33: 0.2921 T12: -0.0285 REMARK 3 T13: 0.0052 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.3422 L22: 0.3361 REMARK 3 L33: 2.0561 L12: -0.1702 REMARK 3 L13: -0.3010 L23: -0.2274 REMARK 3 S TENSOR REMARK 3 S11: 0.3966 S12: -0.3657 S13: -0.0055 REMARK 3 S21: 0.1463 S22: -0.2956 S23: 0.4065 REMARK 3 S31: 0.0411 S32: -0.5656 S33: 0.1113 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 342 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1473 -14.5688 24.3353 REMARK 3 T TENSOR REMARK 3 T11: 0.2203 T22: 0.3004 REMARK 3 T33: 0.2311 T12: 0.0160 REMARK 3 T13: 0.0142 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 2.4097 L22: 3.9226 REMARK 3 L33: 3.0198 L12: -0.6107 REMARK 3 L13: 0.2082 L23: -0.5043 REMARK 3 S TENSOR REMARK 3 S11: 0.0414 S12: -0.0135 S13: 0.0696 REMARK 3 S21: 0.0553 S22: -0.1460 S23: -0.0301 REMARK 3 S31: -0.0183 S32: -0.1039 S33: 0.0912 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 422 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4292 -25.8789 18.2873 REMARK 3 T TENSOR REMARK 3 T11: 0.3379 T22: 0.3895 REMARK 3 T33: 0.3108 T12: 0.0528 REMARK 3 T13: 0.0135 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 2.9637 L22: 5.9603 REMARK 3 L33: 5.3176 L12: 3.9459 REMARK 3 L13: 2.5780 L23: 2.1192 REMARK 3 S TENSOR REMARK 3 S11: -0.4382 S12: 0.4482 S13: -0.4360 REMARK 3 S21: 0.1627 S22: 0.1904 S23: -0.2166 REMARK 3 S31: 0.4552 S32: 0.6413 S33: 0.2491 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 438 THROUGH 473 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9060 -9.4897 21.7841 REMARK 3 T TENSOR REMARK 3 T11: 0.3367 T22: 0.3497 REMARK 3 T33: 0.3301 T12: -0.0113 REMARK 3 T13: 0.0411 T23: -0.0526 REMARK 3 L TENSOR REMARK 3 L11: 1.8955 L22: 0.6015 REMARK 3 L33: 1.6315 L12: 0.8943 REMARK 3 L13: 0.1423 L23: 0.2816 REMARK 3 S TENSOR REMARK 3 S11: -0.0047 S12: -0.0755 S13: 0.2550 REMARK 3 S21: -0.0909 S22: 0.0666 S23: -0.3406 REMARK 3 S31: -0.0936 S32: 0.1896 S33: 0.0411 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 474 THROUGH 530 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5741 -11.5365 17.2034 REMARK 3 T TENSOR REMARK 3 T11: 0.2979 T22: 0.3010 REMARK 3 T33: 0.2652 T12: 0.0160 REMARK 3 T13: 0.0152 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 4.4846 L22: 0.8057 REMARK 3 L33: 2.6148 L12: -0.5811 REMARK 3 L13: 0.7399 L23: 0.2641 REMARK 3 S TENSOR REMARK 3 S11: -0.0896 S12: -0.1115 S13: -0.0943 REMARK 3 S21: 0.0108 S22: 0.0805 S23: -0.2712 REMARK 3 S31: -0.1709 S32: 0.1981 S33: -0.0129 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 531 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6163 -13.6353 15.4188 REMARK 3 T TENSOR REMARK 3 T11: 0.3734 T22: 0.5406 REMARK 3 T33: 0.5088 T12: 0.1347 REMARK 3 T13: -0.0559 T23: -0.0878 REMARK 3 L TENSOR REMARK 3 L11: 6.6922 L22: 4.1739 REMARK 3 L33: 8.5369 L12: 0.7834 REMARK 3 L13: -1.1353 L23: 2.8235 REMARK 3 S TENSOR REMARK 3 S11: 0.2311 S12: 0.3281 S13: -0.2176 REMARK 3 S21: -0.5540 S22: -0.4985 S23: 0.4160 REMARK 3 S31: -0.2808 S32: -0.1772 S33: -0.0016 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 305 THROUGH 371 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7930 -16.5931 -9.1544 REMARK 3 T TENSOR REMARK 3 T11: 0.2768 T22: 0.2910 REMARK 3 T33: 0.2012 T12: -0.0094 REMARK 3 T13: 0.0860 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 4.6095 L22: 3.0595 REMARK 3 L33: 5.7145 L12: 0.6473 REMARK 3 L13: 0.7362 L23: -0.7176 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: 0.5921 S13: 0.0768 REMARK 3 S21: -0.2518 S22: -0.0584 S23: -0.1152 REMARK 3 S31: 0.1819 S32: 0.5070 S33: 0.0718 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 372 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1707 -7.8639 -3.9514 REMARK 3 T TENSOR REMARK 3 T11: 0.3175 T22: 0.3178 REMARK 3 T33: 0.2351 T12: 0.0140 REMARK 3 T13: 0.0443 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 2.7269 L22: 4.1640 REMARK 3 L33: 3.9854 L12: -0.6573 REMARK 3 L13: 0.4084 L23: -0.8559 REMARK 3 S TENSOR REMARK 3 S11: -0.1529 S12: -0.0793 S13: 0.1610 REMARK 3 S21: 0.1131 S22: 0.1043 S23: 0.0975 REMARK 3 S31: -0.4498 S32: -0.0304 S33: -0.0483 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 438 THROUGH 549 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7782 -14.7946 4.2729 REMARK 3 T TENSOR REMARK 3 T11: 0.2685 T22: 0.3197 REMARK 3 T33: 0.2332 T12: 0.0185 REMARK 3 T13: 0.0498 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 2.2638 L22: 3.0254 REMARK 3 L33: 4.0191 L12: 0.3953 REMARK 3 L13: 0.4566 L23: 0.0488 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: 0.0227 S13: 0.0031 REMARK 3 S21: -0.0328 S22: -0.0402 S23: 0.0341 REMARK 3 S31: 0.0292 S32: 0.2370 S33: 0.0893 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 688 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1738 -0.0973 25.2588 REMARK 3 T TENSOR REMARK 3 T11: 0.6795 T22: 0.6676 REMARK 3 T33: 0.8461 T12: 0.1175 REMARK 3 T13: 0.0621 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 3.4453 L22: 4.6980 REMARK 3 L33: 3.4384 L12: 1.9270 REMARK 3 L13: 2.7625 L23: 1.2039 REMARK 3 S TENSOR REMARK 3 S11: -0.6275 S12: -0.3325 S13: 0.8894 REMARK 3 S21: -0.3922 S22: -0.2894 S23: 0.7891 REMARK 3 S31: -1.2191 S32: -0.5209 S33: 0.6608 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 688 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9263 -31.7104 -10.0843 REMARK 3 T TENSOR REMARK 3 T11: 0.9783 T22: 0.4491 REMARK 3 T33: 0.9577 T12: 0.1721 REMARK 3 T13: -0.0427 T23: -0.1018 REMARK 3 L TENSOR REMARK 3 L11: 3.9395 L22: 2.9508 REMARK 3 L33: 4.0459 L12: 0.6998 REMARK 3 L13: -1.0793 L23: -1.5177 REMARK 3 S TENSOR REMARK 3 S11: 0.1092 S12: 0.4938 S13: -2.1350 REMARK 3 S21: -0.9449 S22: -0.4032 S23: -1.3643 REMARK 3 S31: 0.8937 S32: 0.7558 S33: 0.5550 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5E15 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214167. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT CUBE I-BEAM REMARK 200 SINGLE CRYSTAL ASYMMETRIC CUT REMARK 200 4.965 DEGS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23908 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.74900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2B1V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 28.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 0.05M MGCL2, 0.067M REMARK 280 NACL, 0.1M TRIS, PH 8.3, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.55050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 298 REMARK 465 LYS A 299 REMARK 465 ARG A 300 REMARK 465 SER A 301 REMARK 465 LYS A 302 REMARK 465 ASP A 332 REMARK 465 PRO A 333 REMARK 465 THR A 334 REMARK 465 ARG A 335 REMARK 465 PRO A 336 REMARK 465 PHE A 337 REMARK 465 SER A 338 REMARK 465 GLU A 339 REMARK 465 ALA A 340 REMARK 465 GLY A 415 REMARK 465 LYS A 416 REMARK 465 CYS A 417 REMARK 465 VAL A 418 REMARK 465 GLU A 419 REMARK 465 GLY A 420 REMARK 465 TYR A 459 REMARK 465 THR A 460 REMARK 465 PHE A 461 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 LEU A 469 REMARK 465 GLU A 470 REMARK 465 GLU A 471 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 ILE B 298 REMARK 465 LYS B 299 REMARK 465 ARG B 300 REMARK 465 SER B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 GLU B 419 REMARK 465 GLY B 420 REMARK 465 PHE B 461 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 LYS B 467 REMARK 465 CYS B 530 REMARK 465 LYS B 531 REMARK 465 ASN B 532 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 465 LYS C 686 REMARK 465 HIS C 687 REMARK 465 SER C 697 REMARK 465 SER C 698 REMARK 465 SER C 699 REMARK 465 LYS D 686 REMARK 465 HIS D 687 REMARK 465 SER D 697 REMARK 465 SER D 698 REMARK 465 SER D 699 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 303 CG CD CE NZ REMARK 470 ASN A 304 CG OD1 ND2 REMARK 470 GLN A 414 CG CD OE1 NE2 REMARK 470 MET A 421 CG SD CE REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 ARG A 548 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 331 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 339 CG CD OE1 OE2 REMARK 470 LYS B 416 CG CD CE NZ REMARK 470 VAL B 418 CG1 CG2 REMARK 470 MET B 421 CG SD CE REMARK 470 GLU B 470 CG CD OE1 OE2 REMARK 470 GLU B 471 CG CD OE1 OE2 REMARK 470 LYS B 481 CG CD CE NZ REMARK 470 LYS B 492 CG CD CE NZ REMARK 470 ARG B 548 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 549 CG CD1 CD2 REMARK 470 ASP C 696 CG OD1 OD2 REMARK 470 LYS D 688 CG CD CE NZ REMARK 470 ARG D 692 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1061 O HOH A 1074 1.89 REMARK 500 O HOH A 1019 O HOH A 1045 1.89 REMARK 500 O HOH A 1011 O HOH A 1031 1.90 REMARK 500 O HOH A 1034 O HOH A 1079 2.11 REMARK 500 OD1 ASP B 484 O HOH B 1001 2.14 REMARK 500 O HOH A 1079 O HOH A 1082 2.15 REMARK 500 O HOH A 1053 O HOH A 1086 2.16 REMARK 500 NZ LYS A 481 O HOH A 1001 2.18 REMARK 500 O HOH A 1077 O HOH B 1001 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1075 O HOH B 1041 1556 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 331 -40.71 62.14 REMARK 500 LEU B 469 75.90 -60.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 547 ARG A 548 -104.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 5KA A 900 REMARK 610 5KA B 901 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5KA A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5KA B 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5E14 RELATED DB: PDB REMARK 900 5E14 CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT REMARK 900 CYCLOFENIL DERIVATIVE REMARK 900 RELATED ID: 5E0X RELATED DB: PDB REMARK 900 5E0X CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT REMARK 900 CYCLOFENIL DERIVATIVE REMARK 900 RELATED ID: 5E0W RELATED DB: PDB REMARK 900 5E0W CONTAINS THE SAME PROTEIN COMPLEXED WITH A DIFFERENT REMARK 900 CYCLOFENIL DERIVATIVE DBREF 5E15 A 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5E15 B 298 554 UNP P03372 ESR1_HUMAN 298 554 DBREF 5E15 C 686 699 PDB 5E15 5E15 686 699 DBREF 5E15 D 686 699 PDB 5E15 5E15 686 699 SEQADV 5E15 SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 5E15 SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 A 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 A 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 A 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 A 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 A 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 A 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 A 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 A 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 A 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 A 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 A 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 A 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 A 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 A 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 A 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 A 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 A 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 A 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 A 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 B 257 ILE LYS ARG SER LYS LYS ASN SER LEU ALA LEU SER LEU SEQRES 2 B 257 THR ALA ASP GLN MET VAL SER ALA LEU LEU ASP ALA GLU SEQRES 3 B 257 PRO PRO ILE LEU TYR SER GLU TYR ASP PRO THR ARG PRO SEQRES 4 B 257 PHE SER GLU ALA SER MET MET GLY LEU LEU THR ASN LEU SEQRES 5 B 257 ALA ASP ARG GLU LEU VAL HIS MET ILE ASN TRP ALA LYS SEQRES 6 B 257 ARG VAL PRO GLY PHE VAL ASP LEU THR LEU HIS ASP GLN SEQRES 7 B 257 VAL HIS LEU LEU GLU CYS ALA TRP LEU GLU ILE LEU MET SEQRES 8 B 257 ILE GLY LEU VAL TRP ARG SER MET GLU HIS PRO GLY LYS SEQRES 9 B 257 LEU LEU PHE ALA PRO ASN LEU LEU LEU ASP ARG ASN GLN SEQRES 10 B 257 GLY LYS CYS VAL GLU GLY MET VAL GLU ILE PHE ASP MET SEQRES 11 B 257 LEU LEU ALA THR SER SER ARG PHE ARG MET MET ASN LEU SEQRES 12 B 257 GLN GLY GLU GLU PHE VAL CYS LEU LYS SER ILE ILE LEU SEQRES 13 B 257 LEU ASN SER GLY VAL TYR THR PHE LEU SER SER THR LEU SEQRES 14 B 257 LYS SER LEU GLU GLU LYS ASP HIS ILE HIS ARG VAL LEU SEQRES 15 B 257 ASP LYS ILE THR ASP THR LEU ILE HIS LEU MET ALA LYS SEQRES 16 B 257 ALA GLY LEU THR LEU GLN GLN GLN HIS GLN ARG LEU ALA SEQRES 17 B 257 GLN LEU LEU LEU ILE LEU SER HIS ILE ARG HIS MET SER SEQRES 18 B 257 ASN LYS GLY MET GLU HIS LEU TYR SER MET LYS CYS LYS SEQRES 19 B 257 ASN VAL VAL PRO LEU SER ASP LEU LEU LEU GLU MET LEU SEQRES 20 B 257 ASP ALA HIS ARG LEU HIS ALA PRO THR SER SEQRES 1 C 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 C 14 SER SEQRES 1 D 14 LYS HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SER SER SEQRES 2 D 14 SER HET 5KA A 900 24 HET 5KA B 901 24 HETNAM 5KA 4,4'-({4-[2-(4-FLUOROBUTOXY) HETNAM 2 5KA ETHYL]CYCLOHEXYLIDENE}METHANEDIYL)DIPHENOL FORMUL 5 5KA 2(C25 H31 F O3) FORMUL 7 HOH *143(H2 O) HELIX 1 AA1 LEU A 306 LEU A 310 5 5 HELIX 2 AA2 THR A 311 ALA A 322 1 12 HELIX 3 AA3 MET A 342 ARG A 363 1 22 HELIX 4 AA4 THR A 371 SER A 395 1 25 HELIX 5 AA5 VAL A 422 MET A 438 1 17 HELIX 6 AA6 GLN A 441 SER A 456 1 16 HELIX 7 AA7 ASP A 473 GLY A 494 1 22 HELIX 8 AA8 THR A 496 LYS A 531 1 36 HELIX 9 AA9 SER A 537 HIS A 547 1 11 HELIX 10 AB1 THR B 311 ASP B 321 1 11 HELIX 11 AB2 GLU B 339 ARG B 363 1 25 HELIX 12 AB3 THR B 371 SER B 395 1 25 HELIX 13 AB4 ARG B 412 LYS B 416 1 5 HELIX 14 AB5 VAL B 422 MET B 438 1 17 HELIX 15 AB6 GLN B 441 SER B 456 1 16 HELIX 16 AB7 GLU B 470 GLY B 494 1 25 HELIX 17 AB8 THR B 496 LYS B 529 1 34 HELIX 18 AB9 SER B 537 LEU B 549 1 13 HELIX 19 AC1 ILE C 689 LEU C 694 1 6 HELIX 20 AC2 ILE D 689 GLN D 695 1 7 SHEET 1 AA1 2 LEU A 402 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 LEU A 410 -1 O LEU A 410 N LEU A 402 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 SITE 1 AC1 13 MET A 343 LEU A 346 THR A 347 ALA A 350 SITE 2 AC1 13 GLU A 353 LEU A 387 ARG A 394 PHE A 404 SITE 3 AC1 13 LEU A 428 LEU A 525 LEU A 536 LEU A 540 SITE 4 AC1 13 HOH A1051 SITE 1 AC2 9 THR B 347 ALA B 350 GLU B 353 LEU B 387 SITE 2 AC2 9 ARG B 394 PHE B 404 LEU B 525 LEU B 536 SITE 3 AC2 9 LEU B 540 CRYST1 52.527 75.101 57.628 90.00 110.72 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019038 0.000000 0.007201 0.00000 SCALE2 0.000000 0.013315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018553 0.00000