HEADER MEMBRANE PROTEIN/TRANSCRIPTION 17-OCT-15 5EB1 TITLE THE YFIB-YFIR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: YFIR; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 35-190; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: YFIB; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: UNP RESIDUES 34-168; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: YFIR, PA1121; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET-1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 13 ORGANISM_TAXID: 208964; SOURCE 14 STRAIN: PAO1; SOURCE 15 GENE: YFIB, PA1119; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIPL; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PETDUET-1 KEYWDS OMPA/PAL-LIKE OUTER-MEMBRANE LIPOPROTEIN, PERIPLASMIC REPRESSOR KEYWDS 2 PROTEIN, COMPLEX, MEMBRANE PROTEIN-TRANSCRIPTION COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.XU,X.YANG,X.-A.YANG,L.ZHOU,T.-Z.LIU,Z.FAN,T.JIANG REVDAT 4 08-NOV-23 5EB1 1 REMARK REVDAT 3 27-SEP-17 5EB1 1 REMARK REVDAT 2 15-JUN-16 5EB1 1 JRNL REVDAT 1 18-MAY-16 5EB1 0 JRNL AUTH M.XU,X.YANG,X.-A.YANG,L.ZHOU,T.-Z.LIU,Z.FAN,T.JIANG JRNL TITL STRUCTURAL INSIGHTS INTO THE REGULATORY MECHANISM OF THE JRNL TITL 2 PSEUDOMONAS AERUGINOSA YFIBNR SYSTEM JRNL REF PROTEIN CELL V. 7 403 2016 JRNL REFN ESSN 1674-8018 JRNL PMID 27113583 JRNL DOI 10.1007/S13238-016-0264-7 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 67717 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.6309 - 5.1325 0.95 2681 137 0.1708 0.2026 REMARK 3 2 5.1325 - 4.0754 0.98 2752 151 0.1359 0.1449 REMARK 3 3 4.0754 - 3.5607 0.99 2791 146 0.1486 0.1693 REMARK 3 4 3.5607 - 3.2353 0.98 2781 159 0.1611 0.2000 REMARK 3 5 3.2353 - 3.0036 0.98 2754 153 0.1785 0.2107 REMARK 3 6 3.0036 - 2.8265 0.98 2759 141 0.1945 0.2373 REMARK 3 7 2.8265 - 2.6850 0.97 2765 127 0.1876 0.1930 REMARK 3 8 2.6850 - 2.5682 0.97 2730 133 0.1940 0.2286 REMARK 3 9 2.5682 - 2.4693 0.98 2730 153 0.1905 0.2280 REMARK 3 10 2.4693 - 2.3841 0.97 2778 143 0.1874 0.2135 REMARK 3 11 2.3841 - 2.3096 0.97 2731 138 0.1869 0.2217 REMARK 3 12 2.3096 - 2.2436 0.96 2701 141 0.2058 0.2565 REMARK 3 13 2.2436 - 2.1845 0.96 2733 138 0.1940 0.2547 REMARK 3 14 2.1845 - 2.1312 0.97 2715 126 0.1910 0.2202 REMARK 3 15 2.1312 - 2.0828 0.96 2728 144 0.1975 0.2174 REMARK 3 16 2.0828 - 2.0385 0.95 2704 144 0.2147 0.2511 REMARK 3 17 2.0385 - 1.9977 0.96 2707 144 0.1996 0.1978 REMARK 3 18 1.9977 - 1.9600 0.96 2666 156 0.2012 0.2137 REMARK 3 19 1.9600 - 1.9250 0.96 2711 139 0.2214 0.2410 REMARK 3 20 1.9250 - 1.8924 0.94 2656 153 0.2556 0.3020 REMARK 3 21 1.8924 - 1.8618 0.95 2711 135 0.2450 0.2638 REMARK 3 22 1.8618 - 1.8332 0.95 2617 146 0.2500 0.2882 REMARK 3 23 1.8332 - 1.8062 0.95 2729 145 0.2687 0.2767 REMARK 3 24 1.8062 - 1.7808 0.61 1714 81 0.2531 0.2976 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4331 REMARK 3 ANGLE : 1.110 5853 REMARK 3 CHIRALITY : 0.047 647 REMARK 3 PLANARITY : 0.005 788 REMARK 3 DIHEDRAL : 12.946 1651 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EB1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214478. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67774 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.46300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4NY7, 5EAZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M TRIS REMARK 280 -HCL, 12%(W/V) POLYETHYLENE GLYCOL 8000, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 32 REMARK 465 ASN A 33 REMARK 465 SER A 34 REMARK 465 ASP A 35 REMARK 465 ASP A 36 REMARK 465 ALA A 37 REMARK 465 ARG A 38 REMARK 465 THR A 39 REMARK 465 GLN A 187 REMARK 465 ALA A 188 REMARK 465 THR A 189 REMARK 465 PRO A 190 REMARK 465 GLY B 34 REMARK 465 LEU B 35 REMARK 465 SER B 36 REMARK 465 ALA B 37 REMARK 465 GLU B 38 REMARK 465 GLN B 39 REMARK 465 ILE B 40 REMARK 465 ALA B 41 REMARK 465 VAL B 42 REMARK 465 PRO B 43 REMARK 465 GLU B 168 REMARK 465 GLY C 32 REMARK 465 ASN C 33 REMARK 465 SER C 34 REMARK 465 ASP C 35 REMARK 465 ASP C 36 REMARK 465 ALA C 37 REMARK 465 ARG C 38 REMARK 465 GLN C 187 REMARK 465 ALA C 188 REMARK 465 THR C 189 REMARK 465 PRO C 190 REMARK 465 GLY D 34 REMARK 465 LEU D 35 REMARK 465 SER D 36 REMARK 465 ALA D 37 REMARK 465 GLU D 38 REMARK 465 GLN D 39 REMARK 465 ILE D 40 REMARK 465 ALA D 41 REMARK 465 VAL D 42 REMARK 465 PRO D 43 REMARK 465 GLU D 168 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 281 O HOH C 342 1.80 REMARK 500 O HOH A 342 O HOH A 347 1.81 REMARK 500 O HOH D 400 O HOH D 425 1.81 REMARK 500 O HOH C 224 O HOH C 279 1.82 REMARK 500 O HOH A 351 O HOH A 352 1.85 REMARK 500 O HOH A 324 O HOH A 350 1.88 REMARK 500 O HOH B 306 O HOH B 382 1.89 REMARK 500 O HOH D 374 O HOH D 399 1.90 REMARK 500 O HOH D 342 O HOH D 403 1.90 REMARK 500 O HOH A 233 O HOH A 341 1.90 REMARK 500 O HOH B 361 O HOH B 376 1.91 REMARK 500 O HOH D 314 O HOH D 409 1.91 REMARK 500 O HOH D 381 O HOH D 420 1.94 REMARK 500 O HOH A 320 O HOH B 362 1.97 REMARK 500 O HOH A 305 O HOH A 340 1.97 REMARK 500 O HOH A 328 O HOH A 335 2.02 REMARK 500 O HOH C 281 O HOH C 304 2.02 REMARK 500 O HOH A 306 O HOH A 324 2.04 REMARK 500 O HOH C 303 O HOH D 394 2.04 REMARK 500 O HOH D 327 O HOH D 392 2.05 REMARK 500 O HOH A 230 O HOH A 335 2.05 REMARK 500 O HOH C 340 O HOH D 387 2.08 REMARK 500 O HOH A 309 O HOH A 336 2.08 REMARK 500 O HOH D 405 O HOH D 415 2.08 REMARK 500 O HOH B 358 O HOH B 387 2.11 REMARK 500 NE ARG B 71 O HOH B 301 2.14 REMARK 500 O HOH B 351 O HOH B 376 2.14 REMARK 500 O HOH A 320 O HOH A 321 2.16 REMARK 500 O HOH C 301 O HOH C 326 2.18 REMARK 500 OD1 ASP D 93 O HOH D 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 295 O HOH D 393 1645 1.92 REMARK 500 O HOH C 289 O HOH D 319 1655 2.18 REMARK 500 O HOH A 321 O HOH D 393 1645 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 144 54.95 -117.42 REMARK 500 ARG B 51 -130.75 -103.62 REMARK 500 ASN B 68 14.09 59.48 REMARK 500 GLU C 144 45.38 -109.54 REMARK 500 ARG D 51 -132.07 -102.33 REMARK 500 ASN D 68 14.14 59.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 352 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 353 DISTANCE = 7.47 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EAZ RELATED DB: PDB REMARK 900 RELATED ID: 5EB0 RELATED DB: PDB REMARK 900 RELATED ID: 5EB2 RELATED DB: PDB REMARK 900 RELATED ID: 5EB3 RELATED DB: PDB DBREF 5EB1 A 35 190 UNP Q9I4L4 Q9I4L4_PSEAE 35 190 DBREF 5EB1 B 34 168 UNP Q9I4L6 Q9I4L6_PSEAE 34 168 DBREF 5EB1 C 35 190 UNP Q9I4L4 Q9I4L4_PSEAE 35 190 DBREF 5EB1 D 34 168 UNP Q9I4L6 Q9I4L6_PSEAE 34 168 SEQADV 5EB1 GLY A 32 UNP Q9I4L4 EXPRESSION TAG SEQADV 5EB1 ASN A 33 UNP Q9I4L4 EXPRESSION TAG SEQADV 5EB1 SER A 34 UNP Q9I4L4 EXPRESSION TAG SEQADV 5EB1 PRO B 43 UNP Q9I4L6 LEU 43 ENGINEERED MUTATION SEQADV 5EB1 GLY C 32 UNP Q9I4L4 EXPRESSION TAG SEQADV 5EB1 ASN C 33 UNP Q9I4L4 EXPRESSION TAG SEQADV 5EB1 SER C 34 UNP Q9I4L4 EXPRESSION TAG SEQADV 5EB1 PRO D 43 UNP Q9I4L6 LEU 43 ENGINEERED MUTATION SEQRES 1 A 159 GLY ASN SER ASP ASP ALA ARG THR SER ILE GLU GLN ARG SEQRES 2 A 159 SER ASN ALA VAL SER GLN VAL LEU LEU GLY ILE PHE SER SEQRES 3 A 159 TYR VAL ARG TRP PRO LYS GLU PRO ALA VAL LEU GLN LEU SEQRES 4 A 159 CYS VAL VAL GLY PRO THR GLU TYR ALA ASP GLY LEU LEU SEQRES 5 A 159 ARG GLY MET VAL GLN ALA ASN GLY ARG ARG VAL HIS ALA SEQRES 6 A 159 GLU ARG ARG ALA VAL ASP ASN PRO ASP LEU GLY THR LEU SEQRES 7 A 159 CYS ASN VAL ILE TYR LEU GLY VAL VAL ASP GLU ARG GLU SEQRES 8 A 159 ARG GLN GLN VAL PHE ARG SER LEU ALA GLY HIS PRO VAL SEQRES 9 A 159 LEU SER ILE SER GLU ARG GLY THR GLU CYS SER VAL GLY SEQRES 10 A 159 SER MET PHE CYS LEU ASN VAL GLY GLY PRO ARG ILE THR SEQRES 11 A 159 PHE GLU ALA ASN LEU ASP SER ILE ALA ARG SER GLY VAL SEQRES 12 A 159 ARG VAL HIS PRO SER VAL LEU LYS LEU ALA ARG ARG GLN SEQRES 13 A 159 ALA THR PRO SEQRES 1 B 135 GLY LEU SER ALA GLU GLN ILE ALA VAL PRO GLN GLU GLN SEQRES 2 B 135 GLY PHE GLU LEU ARG ASP GLU GLY TRP GLU PHE GLY MET SEQRES 3 B 135 SER SER LYS VAL LEU PHE GLY ASN ASN LEU ASP ARG LEU SEQRES 4 B 135 ASN PRO ASP SER ARG ASN THR LEU THR LYS ILE ALA ARG SEQRES 5 B 135 ALA LEU LEU ALA VAL ASP ILE ASP LYS VAL ARG LEU GLU SEQRES 6 B 135 GLY HIS THR ASP ASN TYR GLY ASP GLU GLY TYR ASN GLN SEQRES 7 B 135 LYS LEU SER GLU ARG ARG ALA GLU SER VAL ALA ALA VAL SEQRES 8 B 135 PHE ARG GLU ALA GLY MET PRO ALA ALA ASN ILE GLU VAL SEQRES 9 B 135 ARG GLY LEU GLY MET SER LYS PRO VAL ALA ASP ASN LYS SEQRES 10 B 135 THR ARG ALA GLY ARG SER GLU ASN ARG ARG VAL ALA ILE SEQRES 11 B 135 ILE VAL PRO ALA GLU SEQRES 1 C 159 GLY ASN SER ASP ASP ALA ARG THR SER ILE GLU GLN ARG SEQRES 2 C 159 SER ASN ALA VAL SER GLN VAL LEU LEU GLY ILE PHE SER SEQRES 3 C 159 TYR VAL ARG TRP PRO LYS GLU PRO ALA VAL LEU GLN LEU SEQRES 4 C 159 CYS VAL VAL GLY PRO THR GLU TYR ALA ASP GLY LEU LEU SEQRES 5 C 159 ARG GLY MET VAL GLN ALA ASN GLY ARG ARG VAL HIS ALA SEQRES 6 C 159 GLU ARG ARG ALA VAL ASP ASN PRO ASP LEU GLY THR LEU SEQRES 7 C 159 CYS ASN VAL ILE TYR LEU GLY VAL VAL ASP GLU ARG GLU SEQRES 8 C 159 ARG GLN GLN VAL PHE ARG SER LEU ALA GLY HIS PRO VAL SEQRES 9 C 159 LEU SER ILE SER GLU ARG GLY THR GLU CYS SER VAL GLY SEQRES 10 C 159 SER MET PHE CYS LEU ASN VAL GLY GLY PRO ARG ILE THR SEQRES 11 C 159 PHE GLU ALA ASN LEU ASP SER ILE ALA ARG SER GLY VAL SEQRES 12 C 159 ARG VAL HIS PRO SER VAL LEU LYS LEU ALA ARG ARG GLN SEQRES 13 C 159 ALA THR PRO SEQRES 1 D 135 GLY LEU SER ALA GLU GLN ILE ALA VAL PRO GLN GLU GLN SEQRES 2 D 135 GLY PHE GLU LEU ARG ASP GLU GLY TRP GLU PHE GLY MET SEQRES 3 D 135 SER SER LYS VAL LEU PHE GLY ASN ASN LEU ASP ARG LEU SEQRES 4 D 135 ASN PRO ASP SER ARG ASN THR LEU THR LYS ILE ALA ARG SEQRES 5 D 135 ALA LEU LEU ALA VAL ASP ILE ASP LYS VAL ARG LEU GLU SEQRES 6 D 135 GLY HIS THR ASP ASN TYR GLY ASP GLU GLY TYR ASN GLN SEQRES 7 D 135 LYS LEU SER GLU ARG ARG ALA GLU SER VAL ALA ALA VAL SEQRES 8 D 135 PHE ARG GLU ALA GLY MET PRO ALA ALA ASN ILE GLU VAL SEQRES 9 D 135 ARG GLY LEU GLY MET SER LYS PRO VAL ALA ASP ASN LYS SEQRES 10 D 135 THR ARG ALA GLY ARG SER GLU ASN ARG ARG VAL ALA ILE SEQRES 11 D 135 ILE VAL PRO ALA GLU HET SO4 B 201 5 HET SO4 D 201 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *534(H2 O) HELIX 1 AA1 SER A 40 SER A 57 1 18 HELIX 2 AA2 ALA A 79 ARG A 84 1 6 HELIX 3 AA3 ASP A 105 CYS A 110 1 6 HELIX 4 AA4 ASP A 119 ALA A 131 1 13 HELIX 5 AA5 LEU A 166 SER A 172 1 7 HELIX 6 AA6 PRO A 178 ARG A 185 5 8 HELIX 7 AA7 GLU B 45 LEU B 50 5 6 HELIX 8 AA8 GLY B 58 LYS B 62 5 5 HELIX 9 AA9 ASN B 73 VAL B 90 1 18 HELIX 10 AB1 ASP B 106 GLY B 129 1 24 HELIX 11 AB2 PRO B 131 ALA B 133 5 3 HELIX 12 AB3 THR B 151 ARG B 159 1 9 HELIX 13 AB4 SER C 40 SER C 57 1 18 HELIX 14 AB5 ALA C 79 ARG C 84 1 6 HELIX 15 AB6 ASP C 105 CYS C 110 1 6 HELIX 16 AB7 ASP C 119 ALA C 131 1 13 HELIX 17 AB8 LEU C 166 SER C 172 1 7 HELIX 18 AB9 PRO C 178 ARG C 185 5 8 HELIX 19 AC1 GLU D 45 LEU D 50 5 6 HELIX 20 AC2 GLY D 58 LYS D 62 5 5 HELIX 21 AC3 ASN D 73 VAL D 90 1 18 HELIX 22 AC4 ASP D 106 GLY D 129 1 24 HELIX 23 AC5 PRO D 131 ALA D 133 5 3 HELIX 24 AC6 THR D 151 ARG D 159 1 9 SHEET 1 AA1 2 VAL A 59 ARG A 60 0 SHEET 2 AA1 2 ARG A 175 VAL A 176 -1 O ARG A 175 N ARG A 60 SHEET 1 AA210 MET A 86 VAL A 87 0 SHEET 2 AA210 ARG A 93 ARG A 99 -1 O VAL A 94 N MET A 86 SHEET 3 AA210 LEU A 68 VAL A 73 1 N LEU A 70 O HIS A 95 SHEET 4 AA210 VAL A 112 LEU A 115 1 O TYR A 114 N CYS A 71 SHEET 5 AA210 LEU A 136 SER A 139 1 O LEU A 136 N ILE A 113 SHEET 6 AA210 PHE A 151 ASN A 154 1 O LEU A 153 N SER A 139 SHEET 7 AA210 THR A 161 ASN A 165 -1 O THR A 161 N ASN A 154 SHEET 8 AA210 ARG B 160 VAL B 165 -1 O VAL B 165 N ALA A 164 SHEET 9 AA210 VAL B 95 HIS B 100 -1 N ARG B 96 O ILE B 164 SHEET 10 AA210 ILE B 135 GLY B 139 1 O GLU B 136 N LEU B 97 SHEET 1 AA3 2 VAL C 59 ARG C 60 0 SHEET 2 AA3 2 ARG C 175 VAL C 176 -1 O ARG C 175 N ARG C 60 SHEET 1 AA410 MET C 86 VAL C 87 0 SHEET 2 AA410 ARG C 93 ARG C 99 -1 O VAL C 94 N MET C 86 SHEET 3 AA410 LEU C 68 VAL C 73 1 N LEU C 70 O HIS C 95 SHEET 4 AA410 VAL C 112 LEU C 115 1 O TYR C 114 N CYS C 71 SHEET 5 AA410 LEU C 136 SER C 139 1 O ILE C 138 N LEU C 115 SHEET 6 AA410 PHE C 151 ASN C 154 1 O LEU C 153 N SER C 139 SHEET 7 AA410 THR C 161 ASN C 165 -1 O THR C 161 N ASN C 154 SHEET 8 AA410 VAL D 161 VAL D 165 -1 O VAL D 165 N ALA C 164 SHEET 9 AA410 VAL D 95 GLY D 99 -1 N ARG D 96 O ILE D 164 SHEET 10 AA410 ILE D 135 GLY D 139 1 O GLU D 136 N LEU D 97 SSBOND 1 CYS A 145 CYS A 152 1555 1555 2.06 SSBOND 2 CYS C 145 CYS C 152 1555 1555 2.00 SITE 1 AC1 10 ASN B 67 ASN B 68 THR B 101 ASP B 102 SITE 2 AC1 10 ASN B 110 LEU B 113 ARG B 117 ARG B 159 SITE 3 AC1 10 HOH B 312 ARG D 51 SITE 1 AC2 8 ARG B 51 ASN D 67 ASN D 68 THR D 101 SITE 2 AC2 8 ASP D 102 LEU D 113 ARG D 117 ARG D 159 CRYST1 49.499 58.574 69.863 72.93 96.98 90.19 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020202 0.000068 0.002568 0.00000 SCALE2 0.000000 0.017073 -0.005278 0.00000 SCALE3 0.000000 0.000000 0.015094 0.00000