HEADER UNKNOWN FUNCTION 21-OCT-15 5EDJ TITLE CRYSTAL STRUCTURE OF THE NEISSERIA MENINGITIDIS IRON-REGULATED OUTER TITLE 2 MEMBRANE LIPOPROTEIN FRPD COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRPC OPERON PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 43-271; COMPND 5 SYNONYM: RTX IRON-REGULATED PROTEIN (FRPC), IRON-REGULATED PROTEIN COMPND 6 FRPD; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: FRAGMENT FRPD43-271, WHERE: 1. THE SEQUENCE POSITION COMPND 9 PRESENT IN THE STRUCTURE IS 44-267; 2. LE SEQUENCE AT THE C-TERMINUS COMPND 10 IS A CLONING ARTIFACT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS MC58; SOURCE 3 ORGANISM_TAXID: 122586; SOURCE 4 GENE: LA50_03295; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS IRON-REGULATED PROTEIN FRPD, FRPC-BINDING PROTEIN, NOVEL FOLD, KEYWDS 2 MEMBRANE PROTEIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR E.SVIRIDOVA,L.BUMBA,P.REZACOVA,P.SEBO,I.KUTA SMATANOVA REVDAT 3 10-JAN-24 5EDJ 1 REMARK REVDAT 2 22-NOV-17 5EDJ 1 REMARK REVDAT 1 01-FEB-17 5EDJ 0 JRNL AUTH E.SVIRIDOVA,P.REZACOVA,A.BONDAR,V.VEVERKA,P.NOVAK,G.SCHENK, JRNL AUTH 2 D.I.SVERGUN,I.KUTA SMATANOVA,L.BUMBA JRNL TITL STRUCTURAL BASIS OF THE INTERACTION BETWEEN THE PUTATIVE JRNL TITL 2 ADHESION-INVOLVED AND IRON-REGULATED FRPD AND FRPC PROTEINS JRNL TITL 3 OF NEISSERIA MENINGITIDIS. JRNL REF SCI REP V. 7 40408 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28084396 JRNL DOI 10.1038/SREP40408 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.SVIRIDOVA,L.BUMBA,P.REZACOVA,K.PROCHAZKOVA,D.KAVAN, REMARK 1 AUTH 2 K.BEZOUSHKA,M.KUTY,P.SEBO,I.KUTA SMATANOVA REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC REMARK 1 TITL 2 CHARACTERIZATION OF THE IRON-REGULATED OUTER MEMBRANE REMARK 1 TITL 3 LIPOPROTEIN FRPD FROM NEISSERIA MENINGITIDIS REMARK 1 REF ACTA CRYSTALLOGRAPHICA V. 66 1119 2010 REMARK 1 REF 2 SECTION F REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 20823542 REMARK 1 DOI 10.1107/S174430911003215X REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 12627 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 668 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 855 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1849 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : 0.20000 REMARK 3 B12 (A**2) : -0.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.278 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.231 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.477 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1899 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2579 ; 1.267 ; 1.934 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 223 ; 6.553 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;38.267 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;14.512 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;12.814 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 268 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1497 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1118 ; 3.833 ; 6.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1822 ; 5.280 ;10.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 781 ; 4.605 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 757 ; 6.358 ;12.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 94 REMARK 3 ORIGIN FOR THE GROUP (A): -25.6260 42.0270 1.6160 REMARK 3 T TENSOR REMARK 3 T11: 0.1900 T22: 0.1572 REMARK 3 T33: 0.1491 T12: 0.0284 REMARK 3 T13: 0.0085 T23: 0.0357 REMARK 3 L TENSOR REMARK 3 L11: 2.1116 L22: 3.4903 REMARK 3 L33: 2.6187 L12: 0.7005 REMARK 3 L13: 0.4385 L23: 0.8416 REMARK 3 S TENSOR REMARK 3 S11: 0.0241 S12: -0.0637 S13: 0.1457 REMARK 3 S21: 0.1312 S22: -0.0230 S23: -0.1687 REMARK 3 S31: -0.0693 S32: 0.0707 S33: -0.0011 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 153 REMARK 3 ORIGIN FOR THE GROUP (A): -29.7080 29.9500 3.1210 REMARK 3 T TENSOR REMARK 3 T11: 0.2375 T22: 0.1724 REMARK 3 T33: 0.1196 T12: -0.0014 REMARK 3 T13: 0.0049 T23: 0.0380 REMARK 3 L TENSOR REMARK 3 L11: 1.5426 L22: 4.0090 REMARK 3 L33: 3.3353 L12: 0.2248 REMARK 3 L13: -1.2619 L23: 1.0403 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: -0.0460 S13: -0.0599 REMARK 3 S21: 0.3430 S22: -0.0977 S23: 0.1966 REMARK 3 S31: 0.0865 S32: -0.1919 S33: 0.1292 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 154 A 173 REMARK 3 ORIGIN FOR THE GROUP (A): -31.5270 6.2010 -13.4640 REMARK 3 T TENSOR REMARK 3 T11: 0.2230 T22: 0.1874 REMARK 3 T33: 0.1329 T12: -0.0902 REMARK 3 T13: -0.0066 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 3.2455 L22: 7.1169 REMARK 3 L33: 6.0037 L12: 0.8327 REMARK 3 L13: -1.8749 L23: 1.0123 REMARK 3 S TENSOR REMARK 3 S11: -0.1834 S12: -0.1650 S13: -0.2355 REMARK 3 S21: -0.5889 S22: 0.3065 S23: -0.2869 REMARK 3 S31: 0.2014 S32: 0.4422 S33: -0.1231 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 174 A 200 REMARK 3 ORIGIN FOR THE GROUP (A): -30.8870 5.5130 -5.5940 REMARK 3 T TENSOR REMARK 3 T11: 0.2302 T22: 0.1332 REMARK 3 T33: 0.1557 T12: -0.0598 REMARK 3 T13: 0.0271 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 2.9645 L22: 4.2939 REMARK 3 L33: 6.9585 L12: -0.3560 REMARK 3 L13: 0.9184 L23: -0.9034 REMARK 3 S TENSOR REMARK 3 S11: 0.1835 S12: 0.0513 S13: -0.1076 REMARK 3 S21: -0.0721 S22: -0.1693 S23: 0.2143 REMARK 3 S31: 0.5856 S32: 0.2266 S33: -0.0142 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 201 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): -28.2910 8.1240 3.8620 REMARK 3 T TENSOR REMARK 3 T11: 0.3990 T22: 0.2603 REMARK 3 T33: 0.2258 T12: -0.1099 REMARK 3 T13: 0.0210 T23: 0.0365 REMARK 3 L TENSOR REMARK 3 L11: 0.5747 L22: 10.3074 REMARK 3 L33: 10.7960 L12: -1.7774 REMARK 3 L13: 1.6548 L23: -10.4131 REMARK 3 S TENSOR REMARK 3 S11: -0.1534 S12: -0.0126 S13: -0.0027 REMARK 3 S21: 0.2636 S22: -0.2966 S23: -0.3869 REMARK 3 S31: -0.0937 S32: 0.1156 S33: 0.4500 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 221 A 267 REMARK 3 ORIGIN FOR THE GROUP (A): -32.7460 22.7340 -3.6840 REMARK 3 T TENSOR REMARK 3 T11: 0.2237 T22: 0.2105 REMARK 3 T33: 0.1279 T12: -0.0276 REMARK 3 T13: 0.0510 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.4133 L22: 6.2621 REMARK 3 L33: 1.0971 L12: 1.7388 REMARK 3 L13: 0.8398 L23: 0.1839 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: 0.1287 S13: 0.0605 REMARK 3 S21: 0.2058 S22: 0.0230 S23: 0.3951 REMARK 3 S31: -0.0264 S32: -0.1780 S33: -0.0156 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5EDJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1000214342. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13324 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5EDF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, 2 M AMMONIUM SULFATE, REMARK 280 PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 12.93733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.87467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 12.93733 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.87467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 43 REMARK 465 SER A 268 REMARK 465 ASN A 269 REMARK 465 LYS A 270 REMARK 465 LYS A 271 REMARK 465 LEU A 272 REMARK 465 GLU A 273 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 395 O HOH A 411 6555 1.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 80 68.19 -111.43 REMARK 500 ALA A 97 147.28 175.77 REMARK 500 TYR A 98 108.92 -58.54 REMARK 500 HIS A 191 117.98 -161.47 REMARK 500 LYS A 198 -144.07 -108.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 429 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 430 DISTANCE = 6.76 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EDF RELATED DB: PDB DBREF 5EDJ A 43 271 UNP Q08840 Q08840_NEIME 43 271 SEQADV 5EDJ LEU A 272 UNP Q08840 CLONING ARTIFACT SEQADV 5EDJ GLU A 273 UNP Q08840 CLONING ARTIFACT SEQRES 1 A 231 LYS GLU GLN THR SER PHE ASN ASN PRO GLU PRO MET THR SEQRES 2 A 231 GLY PHE GLU HIS THR VAL THR PHE ASP PHE GLN GLY THR SEQRES 3 A 231 LYS MET VAL ILE PRO TYR GLY TYR LEU ALA ARG TYR THR SEQRES 4 A 231 GLN ASP ASN ALA THR LYS TRP LEU SER ASP THR PRO GLY SEQRES 5 A 231 GLN ASP ALA TYR SER ILE ASN LEU ILE GLU ILE SER VAL SEQRES 6 A 231 TYR TYR LYS LYS THR ASP GLN GLY TRP VAL LEU GLU PRO SEQRES 7 A 231 TYR ASN GLN GLN ASN LYS ALA HIS PHE ILE GLN PHE LEU SEQRES 8 A 231 ARG ASP GLY LEU ASP SER VAL ASP ASP ILE VAL ILE ARG SEQRES 9 A 231 LYS ASP ALA CYS SER LEU SER THR THR MET GLY GLU ARG SEQRES 10 A 231 LEU LEU THR TYR GLY VAL LYS LYS MET PRO SER ALA TYR SEQRES 11 A 231 PRO GLU TYR GLU ALA TYR GLU ASP LYS ARG HIS ILE PRO SEQRES 12 A 231 GLU ASN PRO TYR PHE HIS GLU PHE TYR TYR ILE LYS LYS SEQRES 13 A 231 GLY GLU ASN PRO ALA ILE ILE THR HIS ARG ASN ASN ARG SEQRES 14 A 231 ILE ASN GLN THR GLU GLU ASP SER TYR SER THR SER VAL SEQRES 15 A 231 GLY SER CYS ILE ASN GLY PHE THR VAL GLN TYR TYR PRO SEQRES 16 A 231 PHE ILE ARG GLU LYS GLN GLN LEU THR GLN GLN GLU LEU SEQRES 17 A 231 VAL GLY TYR HIS GLN GLN VAL GLU GLN LEU VAL GLN SER SEQRES 18 A 231 PHE VAL ASN ASN SER ASN LYS LYS LEU GLU FORMUL 2 HOH *130(H2 O) HELIX 1 AA1 GLY A 75 LEU A 77 5 3 HELIX 2 AA2 ASN A 125 GLY A 136 1 12 HELIX 3 AA3 THR A 155 TYR A 163 1 9 HELIX 4 AA4 THR A 246 ASN A 267 1 22 SHEET 1 AA1 3 SER A 47 ASN A 50 0 SHEET 2 AA1 3 LYS A 87 SER A 90 -1 O TRP A 88 N ASN A 50 SHEET 3 AA1 3 THR A 81 GLN A 82 -1 N GLN A 82 O LYS A 87 SHEET 1 AA2 3 THR A 68 PRO A 73 0 SHEET 2 AA2 3 THR A 60 PHE A 65 -1 N PHE A 65 O THR A 68 SHEET 3 AA2 3 TYR A 98 SER A 99 1 O TYR A 98 N ASP A 64 SHEET 1 AA3 9 TRP A 116 GLU A 119 0 SHEET 2 AA3 9 LEU A 102 LYS A 111 -1 N LYS A 110 O VAL A 117 SHEET 3 AA3 9 VAL A 140 LYS A 147 -1 O ILE A 145 N ILE A 103 SHEET 4 AA3 9 PHE A 231 TYR A 235 -1 O THR A 232 N ARG A 146 SHEET 5 AA3 9 TYR A 220 ILE A 228 -1 N ILE A 228 O PHE A 231 SHEET 6 AA3 9 ALA A 203 ASN A 209 -1 N ILE A 204 O GLY A 225 SHEET 7 AA3 9 GLU A 192 LYS A 197 -1 N PHE A 193 O HIS A 207 SHEET 8 AA3 9 TYR A 175 ASP A 180 -1 N ASP A 180 O GLU A 192 SHEET 9 AA3 9 LYS A 166 MET A 168 -1 N MET A 168 O ALA A 177 SSBOND 1 CYS A 150 CYS A 227 1555 1555 2.02 CRYST1 115.390 115.390 38.812 90.00 90.00 120.00 P 64 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008666 0.005003 0.000000 0.00000 SCALE2 0.000000 0.010007 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025765 0.00000