HEADER SIGNALING PROTEIN 10-SEP-14 5EFW TITLE CRYSTAL STRUCTURE OF LOV2-ZDK1 - THE COMPLEX OF OAT LOV2 AND THE TITLE 2 AFFIBODY PROTEIN ZDARK1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NPH1-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 404-546; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: CYS450ALA MUTATION INTRODUCED TO RENDER THE PROTEIN COMPND 8 LIGHT INACTIVE; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: Z-DARK, A SMALL PROTEIN BASED ON THE Z DOMAIN AFFIBODY; COMPND 11 CHAIN: B, C; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: SELECTED FROM AN IN VITRO SELECTION FROM A PROTEIN COMPND 14 DOMAIN LIBRARY USING MRNA DISPLAY BASED ON THE Z DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AVENA SATIVA; SOURCE 3 ORGANISM_COMMON: OAT; SOURCE 4 ORGANISM_TAXID: 4498; SOURCE 5 GENE: NPH1-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 10 ORGANISM_TAXID: 1280; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LOV DOMAIN, PHOTORECEPTOR, AFFIBODY, OPTOGENETIC TOOL, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.WINKLER,H.WANG,E.HARTMANN,K.HAHN,I.SCHLICHTING REVDAT 5 10-JAN-24 5EFW 1 DBREF REVDAT 4 31-JAN-18 5EFW 1 REMARK REVDAT 3 07-SEP-16 5EFW 1 JRNL REVDAT 2 27-JUL-16 5EFW 1 JRNL REVDAT 1 20-JUL-16 5EFW 0 JRNL AUTH H.WANG,M.VILELA,A.WINKLER,M.TARNAWSKI,I.SCHLICHTING, JRNL AUTH 2 H.YUMEREFENDI,B.KUHLMAN,R.LIU,G.DANUSER,K.M.HAHN JRNL TITL LOVTRAP: AN OPTOGENETIC SYSTEM FOR PHOTOINDUCED PROTEIN JRNL TITL 2 DISSOCIATION. JRNL REF NAT.METHODS V. 13 755 2016 JRNL REFN ESSN 1548-7105 JRNL PMID 27427858 JRNL DOI 10.1038/NMETH.3926 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 17445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2917 - 3.8156 0.98 2941 155 0.1751 0.2135 REMARK 3 2 3.8156 - 3.0287 0.99 2760 146 0.1916 0.2466 REMARK 3 3 3.0287 - 2.6459 0.99 2749 144 0.2359 0.3103 REMARK 3 4 2.6459 - 2.4040 1.00 2721 144 0.2327 0.2940 REMARK 3 5 2.4040 - 2.2317 1.00 2716 143 0.2229 0.2891 REMARK 3 6 2.2317 - 2.1001 1.00 2685 141 0.2315 0.2901 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2049 REMARK 3 ANGLE : 1.064 2777 REMARK 3 CHIRALITY : 0.075 306 REMARK 3 PLANARITY : 0.005 360 REMARK 3 DIHEDRAL : 13.312 777 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 406:521) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3681 10.4853 -17.2964 REMARK 3 T TENSOR REMARK 3 T11: 0.1090 T22: 0.1827 REMARK 3 T33: 0.1634 T12: -0.0003 REMARK 3 T13: -0.0103 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 2.9375 L22: 3.0123 REMARK 3 L33: 3.4250 L12: -0.7565 REMARK 3 L13: -0.0727 L23: -0.2053 REMARK 3 S TENSOR REMARK 3 S11: -0.1253 S12: -0.1065 S13: -0.2189 REMARK 3 S21: 0.0881 S22: 0.0878 S23: -0.0185 REMARK 3 S31: 0.1246 S32: 0.0245 S33: 0.0130 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 522:546) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9061 13.8979 -8.6443 REMARK 3 T TENSOR REMARK 3 T11: 0.2078 T22: 0.3467 REMARK 3 T33: 0.2089 T12: 0.0122 REMARK 3 T13: -0.0303 T23: -0.0580 REMARK 3 L TENSOR REMARK 3 L11: 5.2720 L22: 5.6885 REMARK 3 L33: 5.9200 L12: -5.0621 REMARK 3 L13: 3.2885 L23: -4.7879 REMARK 3 S TENSOR REMARK 3 S11: -0.4294 S12: -0.5611 S13: 0.3824 REMARK 3 S21: 0.9087 S22: 0.3318 S23: -0.7410 REMARK 3 S31: -0.3101 S32: 0.0097 S33: 0.0263 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 12:60) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8170 33.2714 -24.6081 REMARK 3 T TENSOR REMARK 3 T11: 0.3523 T22: 0.1514 REMARK 3 T33: 0.2277 T12: 0.0422 REMARK 3 T13: -0.0394 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 3.7828 L22: 3.6620 REMARK 3 L33: 1.9737 L12: -1.3458 REMARK 3 L13: -0.5255 L23: -0.0412 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.0100 S13: 0.5104 REMARK 3 S21: 0.0674 S22: -0.1639 S23: -0.2423 REMARK 3 S31: -0.3396 S32: 0.0679 S33: 0.1232 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 6:60) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1506 30.0238 -39.0141 REMARK 3 T TENSOR REMARK 3 T11: 0.3390 T22: 0.2350 REMARK 3 T33: 0.1519 T12: -0.0412 REMARK 3 T13: 0.0107 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 5.5117 L22: 3.8448 REMARK 3 L33: 4.0648 L12: -1.7944 REMARK 3 L13: 1.8515 L23: -1.6749 REMARK 3 S TENSOR REMARK 3 S11: 0.0110 S12: 0.3732 S13: 0.1719 REMARK 3 S21: -0.3416 S22: -0.0690 S23: -0.2172 REMARK 3 S31: -0.3622 S32: 0.1437 S33: 0.0634 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EFW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000214843. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS, XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17450 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.52800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.260 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2V1A, 1LP1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CITRATE PH 3.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.01500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 27.35000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 27.35000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.00750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 27.35000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 27.35000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 141.02250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 27.35000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 27.35000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 47.00750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 27.35000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 27.35000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 141.02250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 94.01500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 402 REMARK 465 SER A 403 REMARK 465 LEU A 404 REMARK 465 ALA A 405 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 VAL B 1 REMARK 465 ASP B 2 REMARK 465 ASN B 3 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 VAL C 1 REMARK 465 ASP C 2 REMARK 465 ASN C 3 REMARK 465 LYS C 4 REMARK 465 PHE C 5 REMARK 465 ASN C 6 REMARK 465 LYS C 7 REMARK 465 GLU C 8 REMARK 465 LYS C 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 522 -136.35 52.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2V0U RELATED DB: PDB REMARK 900 RELATED ID: 1LP1 RELATED DB: PDB DBREF 5EFW A 404 546 UNP O49003 O49003_AVESA 404 546 DBREF 5EFW B -1 58 PDB 5EFW 5EFW -1 58 DBREF 5EFW C -1 58 PDB 5EFW 5EFW -1 58 SEQADV 5EFW GLY A 402 UNP O49003 EXPRESSION TAG SEQADV 5EFW SER A 403 UNP O49003 EXPRESSION TAG SEQADV 5EFW ALA A 450 UNP O49003 CYS 450 ENGINEERED MUTATION SEQRES 1 A 145 GLY SER LEU ALA THR THR LEU GLU ARG ILE GLU LYS ASN SEQRES 2 A 145 PHE VAL ILE THR ASP PRO ARG LEU PRO ASP ASN PRO ILE SEQRES 3 A 145 ILE PHE ALA SER ASP SER PHE LEU GLN LEU THR GLU TYR SEQRES 4 A 145 SER ARG GLU GLU ILE LEU GLY ARG ASN ALA ARG PHE LEU SEQRES 5 A 145 GLN GLY PRO GLU THR ASP ARG ALA THR VAL ARG LYS ILE SEQRES 6 A 145 ARG ASP ALA ILE ASP ASN GLN THR GLU VAL THR VAL GLN SEQRES 7 A 145 LEU ILE ASN TYR THR LYS SER GLY LYS LYS PHE TRP ASN SEQRES 8 A 145 LEU PHE HIS LEU GLN PRO MET ARG ASP GLN LYS GLY ASP SEQRES 9 A 145 VAL GLN TYR PHE ILE GLY VAL GLN LEU ASP GLY THR GLU SEQRES 10 A 145 HIS VAL ARG ASP ALA ALA GLU ARG GLU GLY VAL MET LEU SEQRES 11 A 145 ILE LYS LYS THR ALA GLU ASN ILE ASP GLU ALA ALA LYS SEQRES 12 A 145 GLU LEU SEQRES 1 B 60 GLY SER VAL ASP ASN LYS PHE ASN LYS GLU LYS THR ARG SEQRES 2 B 60 ALA GLY ALA GLU ILE HIS SER LEU PRO ASN LEU ASN VAL SEQRES 3 B 60 GLU GLN LYS PHE ALA PHE ILE VAL SER LEU PHE ASP ASP SEQRES 4 B 60 PRO SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS SEQRES 5 B 60 LEU ASN ASP ALA GLN ALA PRO LYS SEQRES 1 C 60 GLY SER VAL ASP ASN LYS PHE ASN LYS GLU LYS THR ARG SEQRES 2 C 60 ALA GLY ALA GLU ILE HIS SER LEU PRO ASN LEU ASN VAL SEQRES 3 C 60 GLU GLN LYS PHE ALA PHE ILE VAL SER LEU PHE ASP ASP SEQRES 4 C 60 PRO SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS SEQRES 5 C 60 LEU ASN ASP ALA GLN ALA PRO LYS HET FMN A 601 31 HET SO4 A 602 5 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET SO4 B 101 5 HET SO4 B 102 5 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM SO4 SULFATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 4 FMN C17 H21 N4 O9 P FORMUL 5 SO4 6(O4 S 2-) FORMUL 11 HOH *94(H2 O) HELIX 1 AA1 SER A 431 GLU A 439 1 9 HELIX 2 AA2 SER A 441 LEU A 446 1 6 HELIX 3 AA3 ASN A 449 GLN A 454 5 6 HELIX 4 AA4 ASP A 459 ASN A 472 1 14 HELIX 5 AA5 ARG A 521 ALA A 543 1 23 HELIX 6 AA6 PHE B 5 LEU B 19 1 15 HELIX 7 AA7 ASN B 23 ASP B 37 1 15 HELIX 8 AA8 GLN B 40 GLN B 55 1 16 HELIX 9 AA9 ARG C 11 SER C 18 1 8 HELIX 10 AB1 ASN C 23 ASP C 37 1 15 HELIX 11 AB2 GLN C 40 GLN C 55 1 16 SHEET 1 AA1 5 ILE A 427 ALA A 430 0 SHEET 2 AA1 5 ASN A 414 THR A 418 -1 N ILE A 417 O ILE A 428 SHEET 3 AA1 5 VAL A 506 GLY A 516 -1 O PHE A 509 N THR A 418 SHEET 4 AA1 5 LYS A 489 ARG A 500 -1 N MET A 499 O GLN A 507 SHEET 5 AA1 5 VAL A 476 TYR A 483 -1 N VAL A 476 O LEU A 496 SITE 1 AC1 22 VAL A 416 THR A 418 ASN A 425 ASN A 449 SITE 2 AC1 22 ALA A 450 ARG A 451 LEU A 453 GLN A 454 SITE 3 AC1 22 VAL A 463 ILE A 470 LEU A 480 ASN A 482 SITE 4 AC1 22 ASN A 492 PHE A 494 LEU A 496 PHE A 509 SITE 5 AC1 22 ILE A 510 GLY A 511 GLN A 513 HOH A 704 SITE 6 AC1 22 HOH A 708 LYS B 58 SITE 1 AC2 3 ASP A 501 GLN A 502 HOH A 732 SITE 1 AC3 6 ARG A 410 GLU A 412 LYS A 413 ARG A 448 SITE 2 AC3 6 HOH A 715 HOH A 717 SITE 1 AC4 3 GLU A 475 ARG A 500 HOH A 705 SITE 1 AC5 7 GLU A 475 THR A 477 HIS A 495 ARG A 526 SITE 2 AC5 7 LYS A 533 HOH A 702 HOH A 748 SITE 1 AC6 5 GLU A 443 HOH A 715 ASN B 23 VAL B 24 SITE 2 AC6 5 HOH B 201 SITE 1 AC7 3 GLN B 40 ASN B 43 LYS C 50 CRYST1 54.700 54.700 188.030 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018282 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018282 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005318 0.00000