data_5EPL # _entry.id 5EPL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.319 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5EPL WWPDB D_1000215315 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5EQ0 PDB . unspecified 5EPJ PDB . unspecified 5EPK PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5EPL _pdbx_database_status.recvd_initial_deposition_date 2015-11-11 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Y.' 1 'Tempel, W.' 2 'Walker, J.R.' 3 'Stuckey, J.I.' 4 'Dickson, B.M.' 5 'James, L.I.' 6 'Frye, S.V.' 7 'Bountra, C.' 8 'Arrowsmith, C.H.' 9 'Edwards, A.M.' 10 'Min, J.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 180 _citation.page_last 187 _citation.title 'A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nchembio.2007 _citation.pdbx_database_id_PubMed 26807715 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stuckey, J.I.' 1 ? primary 'Dickson, B.M.' 2 ? primary 'Cheng, N.' 3 ? primary 'Liu, Y.' 4 ? primary 'Norris, J.L.' 5 ? primary 'Cholensky, S.H.' 6 ? primary 'Tempel, W.' 7 ? primary 'Qin, S.' 8 ? primary 'Huber, K.G.' 9 ? primary 'Sagum, C.' 10 ? primary 'Black, K.' 11 ? primary 'Li, F.' 12 ? primary 'Huang, X.P.' 13 ? primary 'Roth, B.L.' 14 ? primary 'Baughman, B.M.' 15 ? primary 'Senisterra, G.' 16 ? primary 'Pattenden, S.G.' 17 ? primary 'Vedadi, M.' 18 ? primary 'Brown, P.J.' 19 ? primary 'Bedford, M.T.' 20 ? primary 'Min, J.' 21 ? primary 'Arrowsmith, C.H.' 22 ? primary 'James, L.I.' 23 ? primary 'Frye, S.V.' 24 ? # _cell.entry_id 5EPL _cell.length_a 65.178 _cell.length_b 65.178 _cell.length_c 133.057 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EPL _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 SUMO-protein ligase CBX4' 7354.326 2 6.3.2.- ? ? ? 2 polymer syn unc3866 795.020 2 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 8 ? ? ? ? 4 water nat water 18.015 117 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Chromobox protein homolog 4,Polycomb 2 homolog,hPc2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQEQ GSEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQEQ A,B ? 2 'polypeptide(L)' no yes '(5R0)FAL(ELY)(5R5)' XFALXX C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLU n 1 4 HIS n 1 5 VAL n 1 6 PHE n 1 7 ALA n 1 8 VAL n 1 9 GLU n 1 10 SER n 1 11 ILE n 1 12 GLU n 1 13 LYS n 1 14 LYS n 1 15 ARG n 1 16 ILE n 1 17 ARG n 1 18 LYS n 1 19 GLY n 1 20 ARG n 1 21 VAL n 1 22 GLU n 1 23 TYR n 1 24 LEU n 1 25 VAL n 1 26 LYS n 1 27 TRP n 1 28 ARG n 1 29 GLY n 1 30 TRP n 1 31 SER n 1 32 PRO n 1 33 LYS n 1 34 TYR n 1 35 ASN n 1 36 THR n 1 37 TRP n 1 38 GLU n 1 39 PRO n 1 40 GLU n 1 41 GLU n 1 42 ASN n 1 43 ILE n 1 44 LEU n 1 45 ASP n 1 46 PRO n 1 47 ARG n 1 48 LEU n 1 49 LEU n 1 50 ILE n 1 51 ALA n 1 52 PHE n 1 53 GLN n 1 54 ASN n 1 55 ARG n 1 56 GLU n 1 57 ARG n 1 58 GLN n 1 59 GLU n 1 60 GLN n 2 1 5R0 n 2 2 PHE n 2 3 ALA n 2 4 LEU n 2 5 ELY n 2 6 5R5 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 60 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CBX4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-V2R-pRARE2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details synthetic # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP CBX4_HUMAN O00257 ? 1 EHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNRERQEQ 8 2 PDB 5EPL 5EPL ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5EPL A 3 ? 60 ? O00257 8 ? 65 ? 8 65 2 1 5EPL B 3 ? 60 ? O00257 8 ? 65 ? 8 65 3 2 5EPL C 1 ? 6 ? 5EPL 0 ? 5 ? 0 5 4 2 5EPL D 1 ? 6 ? 5EPL 0 ? 5 ? 0 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5EPL GLY A 1 ? UNP O00257 ? ? 'expression tag' 6 1 1 5EPL SER A 2 ? UNP O00257 ? ? 'expression tag' 7 2 2 5EPL GLY B 1 ? UNP O00257 ? ? 'expression tag' 6 3 2 5EPL SER B 2 ? UNP O00257 ? ? 'expression tag' 7 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5R0 non-polymer . '4-~{tert}-butylbenzoic acid' ? 'C11 H14 O2' 178.228 5R5 'L-peptide linking' n 'methyl L-serinate' 'methyl (2~{S})-2-azanyl-3-oxidanyl-propanoate' 'C4 H9 N O3' 119.119 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ELY 'L-peptide linking' n N~6~,N~6~-diethyl-L-lysine '(2S)-2-azanyl-6-(diethylamino)hexanoic acid' 'C10 H22 N2 O2' 202.294 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5EPL _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.7 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.9 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG3350, 0.2M sodium chloride, 0.1 M sodium cacodylate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-06-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9786036 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9786036 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5EPL _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 44.350 _reflns.d_resolution_high 1.810 _reflns.number_obs 16048 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.06400 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 37.4000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 20.40 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.81 _reflns_shell.d_res_low 1.84 _reflns_shell.percent_possible_all 98.7 _reflns_shell.Rmerge_I_obs 0.66400 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.400 _reflns_shell.pdbx_redundancy 19.60 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5EPL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14370 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.00 _refine.ls_d_res_high 1.81 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.187 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.216 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.800 _refine.ls_number_reflns_R_free 1566 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.B_iso_mean 26.15 _refine.aniso_B[1][1] 0.53000 _refine.aniso_B[2][2] 0.53000 _refine.aniso_B[3][3] -1.71000 _refine.aniso_B[1][2] 0.26000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;THE STRUCTURE WAS SOLVED BY MOLECULAR REPLACEMENT WITH AN ISOMORPHOUS CRYSTAL, FOLLOWED BY PHASE IMPROVEMENT AND AUTOMATED MODEL BUILDING WITH ARP/WARP. PHENIX.ELBOW/MOGUL WAS USED TO GENERATE GEOMETRY RESTRAINTS FOR INHIBITOR BUILDING BLOCKS. LIGAND WAS USED FOR PREPARATION OF LINK RESTRAINTS. LINK RESTRAINTS WERE MANUALLY MODIFIED, FOR EXAMPLE TO ESTABLISH PLANAR GEOMETRY OF METHYL ESTER TERMINUS OF INHIBITOR. COOT WAS USED FOR INTERACTIVE MODEL BUILDING. MODEL GEOMETRY WAS EVALUATED WITH MOLPROBITY.ELECTRON DENSITY DID NOT FULLY RESOLVE THE LIGAND'S C-TERMINAL SERINE ESTER MOIETY ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'THIN SHELLS (SFTOOLS)' _refine.pdbx_overall_ESU_R 0.121 _refine.pdbx_overall_ESU_R_Free 0.117 _refine.overall_SU_ML 0.073 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.790 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1040 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 1165 _refine_hist.d_res_high 1.81 _refine_hist.d_res_low 44.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.019 ? 1102 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1071 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.753 1.953 ? 1499 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.037 3.000 ? 2449 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.698 5.000 ? 119 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 26.329 22.308 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.826 15.000 ? 182 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.552 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.111 0.200 ? 150 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 1209 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 268 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.692 1.777 ? 500 'X-RAY DIFFRACTION' ? r_mcbond_other 1.671 1.757 ? 493 'X-RAY DIFFRACTION' ? r_mcangle_it 2.428 2.645 ? 622 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.81 _refine_ls_shell.d_res_low 1.86 _refine_ls_shell.number_reflns_R_work 1142 _refine_ls_shell.R_factor_R_work 0.1970 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5EPL _struct.title 'Crystal Structure of chromodomain of CBX4 in complex with inhibitor UNC3866' _struct.pdbx_descriptor 'E3 SUMO-protein ligase CBX4 (E.C.6.3.2.-), unc3866' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5EPL _struct_keywords.text 'structural genomics, Structural Genomics Consortium, SGC, transcription-transcription inhibitor complex' _struct_keywords.pdbx_keywords 'transcription/transcription inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? # _struct_biol.id 1 _struct_biol.details 'AUTHORS HAVE NOT INDICATED THE BIOLOGICAL UNIT' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 31 ? ASN A 35 ? SER A 36 ASN A 40 5 ? 5 HELX_P HELX_P2 AA2 GLU A 41 ? ILE A 43 ? GLU A 46 ILE A 48 5 ? 3 HELX_P HELX_P3 AA3 ASP A 45 ? GLN A 53 ? ASP A 50 GLN A 58 5 ? 9 HELX_P HELX_P4 AA4 GLY B 1 ? GLU B 3 ? GLY B 6 GLU B 8 5 ? 3 HELX_P HELX_P5 AA5 SER B 31 ? ASN B 35 ? SER B 36 ASN B 40 5 ? 5 HELX_P HELX_P6 AA6 GLU B 41 ? ILE B 43 ? GLU B 46 ILE B 48 5 ? 3 HELX_P HELX_P7 AA7 PRO B 46 ? GLU B 56 ? PRO B 51 GLU B 61 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? C 5R0 1 C1 ? ? ? 1_555 C PHE 2 N ? ? C 5R0 0 C PHE 1 1_555 ? ? ? ? ? ? ? 1.363 ? covale2 covale both ? C LEU 4 C ? ? ? 1_555 C ELY 5 N ? ? C LEU 3 C ELY 4 1_555 ? ? ? ? ? ? ? 1.326 ? covale3 covale one ? C ELY 5 C ? ? ? 1_555 C 5R5 6 N A ? C ELY 4 C 5R5 5 1_555 ? ? ? ? ? ? ? 1.356 ? covale4 covale one ? C ELY 5 C ? ? ? 1_555 C 5R5 6 N B ? C ELY 4 C 5R5 5 1_555 ? ? ? ? ? ? ? 1.357 ? covale5 covale both ? D 5R0 1 C1 ? ? ? 1_555 D PHE 2 N ? ? D 5R0 0 D PHE 1 1_555 ? ? ? ? ? ? ? 1.339 ? covale6 covale both ? D LEU 4 C ? ? ? 1_555 D ELY 5 N ? ? D LEU 3 D ELY 4 1_555 ? ? ? ? ? ? ? 1.323 ? covale7 covale one ? D ELY 5 C ? ? ? 1_555 D 5R5 6 N ? ? D ELY 4 D 5R5 5 1_555 ? ? ? ? ? ? ? 1.334 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 5 ? PHE A 6 ? VAL A 10 PHE A 11 AA1 2 ALA C 3 ? LEU C 4 ? ALA C 2 LEU C 3 AA2 1 VAL A 8 ? ARG A 17 ? VAL A 13 ARG A 22 AA2 2 ARG A 20 ? TRP A 27 ? ARG A 25 TRP A 32 AA2 3 THR A 36 ? PRO A 39 ? THR A 41 PRO A 44 AA3 1 VAL B 5 ? PHE B 6 ? VAL B 10 PHE B 11 AA3 2 ALA D 3 ? LEU D 4 ? ALA D 2 LEU D 3 AA4 1 VAL B 8 ? ARG B 17 ? VAL B 13 ARG B 22 AA4 2 ARG B 20 ? TRP B 27 ? ARG B 25 TRP B 32 AA4 3 THR B 36 ? PRO B 39 ? THR B 41 PRO B 44 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 6 ? N PHE A 11 O ALA C 3 ? O ALA C 2 AA2 1 2 N GLU A 12 ? N GLU A 17 O LEU A 24 ? O LEU A 29 AA2 2 3 N VAL A 25 ? N VAL A 30 O THR A 36 ? O THR A 41 AA3 1 2 N PHE B 6 ? N PHE B 11 O ALA D 3 ? O ALA D 2 AA4 1 2 N GLU B 12 ? N GLU B 17 O LEU B 24 ? O LEU B 29 AA4 2 3 N TYR B 23 ? N TYR B 28 O GLU B 38 ? O GLU B 43 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C 5R0 0 ? 19 'binding site for UNC3866 chain C' AC2 Software D 5R0 0 ? 22 'binding site for UNC3866 chain D' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 HIS A 4 ? HIS A 9 . ? 1_555 ? 2 AC1 19 VAL A 5 ? VAL A 10 . ? 1_555 ? 3 AC1 19 PHE A 6 ? PHE A 11 . ? 1_555 ? 4 AC1 19 ALA A 7 ? ALA A 12 . ? 1_555 ? 5 AC1 19 VAL A 8 ? VAL A 13 . ? 1_555 ? 6 AC1 19 TRP A 27 ? TRP A 32 . ? 1_555 ? 7 AC1 19 TRP A 30 ? TRP A 35 . ? 1_555 ? 8 AC1 19 GLU A 38 ? GLU A 43 . ? 1_555 ? 9 AC1 19 ASN A 42 ? ASN A 47 . ? 1_555 ? 10 AC1 19 LEU A 44 ? LEU A 49 . ? 1_555 ? 11 AC1 19 ASP A 45 ? ASP A 50 . ? 1_555 ? 12 AC1 19 ARG A 47 ? ARG A 52 . ? 1_555 ? 13 AC1 19 LEU A 48 ? LEU A 53 . ? 1_555 ? 14 AC1 19 HOH M . ? HOH A 212 . ? 1_555 ? 15 AC1 19 HOH M . ? HOH A 216 . ? 1_555 ? 16 AC1 19 ALA B 7 ? ALA B 12 . ? 1_555 ? 17 AC1 19 HOH O . ? HOH C 201 . ? 1_555 ? 18 AC1 19 HOH O . ? HOH C 202 . ? 1_555 ? 19 AC1 19 HOH O . ? HOH C 203 . ? 1_555 ? 20 AC2 22 GLU A 3 ? GLU A 8 . ? 5_454 ? 21 AC2 22 HIS A 4 ? HIS A 9 . ? 5_454 ? 22 AC2 22 LEU A 44 ? LEU A 49 . ? 1_555 ? 23 AC2 22 PRO A 46 ? PRO A 51 . ? 1_555 ? 24 AC2 22 HIS B 4 ? HIS B 9 . ? 1_555 ? 25 AC2 22 VAL B 5 ? VAL B 10 . ? 1_555 ? 26 AC2 22 PHE B 6 ? PHE B 11 . ? 1_555 ? 27 AC2 22 ALA B 7 ? ALA B 12 . ? 1_555 ? 28 AC2 22 VAL B 8 ? VAL B 13 . ? 1_555 ? 29 AC2 22 TRP B 27 ? TRP B 32 . ? 1_555 ? 30 AC2 22 TRP B 30 ? TRP B 35 . ? 1_555 ? 31 AC2 22 TYR B 34 ? TYR B 39 . ? 12_575 ? 32 AC2 22 GLU B 38 ? GLU B 43 . ? 1_555 ? 33 AC2 22 ASN B 42 ? ASN B 47 . ? 1_555 ? 34 AC2 22 LEU B 44 ? LEU B 49 . ? 1_555 ? 35 AC2 22 ASP B 45 ? ASP B 50 . ? 1_555 ? 36 AC2 22 ARG B 47 ? ARG B 52 . ? 1_555 ? 37 AC2 22 LEU B 48 ? LEU B 53 . ? 1_555 ? 38 AC2 22 HOH N . ? HOH B 212 . ? 1_555 ? 39 AC2 22 HOH N . ? HOH B 231 . ? 1_555 ? 40 AC2 22 HOH P . ? HOH D 201 . ? 1_555 ? 41 AC2 22 HOH P . ? HOH D 202 . ? 1_555 ? # _atom_sites.entry_id 5EPL _atom_sites.fract_transf_matrix[1][1] 0.015343 _atom_sites.fract_transf_matrix[1][2] 0.008858 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017716 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007516 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 6 6 GLY GLY A . n A 1 2 SER 2 7 7 SER SER A . n A 1 3 GLU 3 8 8 GLU GLU A . n A 1 4 HIS 4 9 9 HIS HIS A . n A 1 5 VAL 5 10 10 VAL VAL A . n A 1 6 PHE 6 11 11 PHE PHE A . n A 1 7 ALA 7 12 12 ALA ALA A . n A 1 8 VAL 8 13 13 VAL VAL A . n A 1 9 GLU 9 14 14 GLU GLU A . n A 1 10 SER 10 15 15 SER SER A . n A 1 11 ILE 11 16 16 ILE ILE A . n A 1 12 GLU 12 17 17 GLU GLU A . n A 1 13 LYS 13 18 18 LYS LYS A . n A 1 14 LYS 14 19 19 LYS LYS A . n A 1 15 ARG 15 20 20 ARG ARG A . n A 1 16 ILE 16 21 21 ILE ILE A . n A 1 17 ARG 17 22 22 ARG ARG A . n A 1 18 LYS 18 23 23 LYS LYS A . n A 1 19 GLY 19 24 24 GLY GLY A . n A 1 20 ARG 20 25 25 ARG ARG A . n A 1 21 VAL 21 26 26 VAL VAL A . n A 1 22 GLU 22 27 27 GLU GLU A . n A 1 23 TYR 23 28 28 TYR TYR A . n A 1 24 LEU 24 29 29 LEU LEU A . n A 1 25 VAL 25 30 30 VAL VAL A . n A 1 26 LYS 26 31 31 LYS LYS A . n A 1 27 TRP 27 32 32 TRP TRP A . n A 1 28 ARG 28 33 33 ARG ARG A . n A 1 29 GLY 29 34 34 GLY GLY A . n A 1 30 TRP 30 35 35 TRP TRP A . n A 1 31 SER 31 36 36 SER SER A . n A 1 32 PRO 32 37 37 PRO PRO A . n A 1 33 LYS 33 38 38 LYS LYS A . n A 1 34 TYR 34 39 39 TYR TYR A . n A 1 35 ASN 35 40 40 ASN ASN A . n A 1 36 THR 36 41 41 THR THR A . n A 1 37 TRP 37 42 42 TRP TRP A . n A 1 38 GLU 38 43 43 GLU GLU A . n A 1 39 PRO 39 44 44 PRO PRO A . n A 1 40 GLU 40 45 45 GLU GLU A . n A 1 41 GLU 41 46 46 GLU GLU A . n A 1 42 ASN 42 47 47 ASN ASN A . n A 1 43 ILE 43 48 48 ILE ILE A . n A 1 44 LEU 44 49 49 LEU LEU A . n A 1 45 ASP 45 50 50 ASP ASP A . n A 1 46 PRO 46 51 51 PRO PRO A . n A 1 47 ARG 47 52 52 ARG ARG A . n A 1 48 LEU 48 53 53 LEU LEU A . n A 1 49 LEU 49 54 54 LEU LEU A . n A 1 50 ILE 50 55 55 ILE ILE A . n A 1 51 ALA 51 56 56 ALA ALA A . n A 1 52 PHE 52 57 57 PHE PHE A . n A 1 53 GLN 53 58 58 GLN GLN A . n A 1 54 ASN 54 59 59 ASN ASN A . n A 1 55 ARG 55 60 ? ? ? A . n A 1 56 GLU 56 61 ? ? ? A . n A 1 57 ARG 57 62 ? ? ? A . n A 1 58 GLN 58 63 ? ? ? A . n A 1 59 GLU 59 64 ? ? ? A . n A 1 60 GLN 60 65 ? ? ? A . n B 1 1 GLY 1 6 6 GLY GLY B . n B 1 2 SER 2 7 7 SER SER B . n B 1 3 GLU 3 8 8 GLU GLU B . n B 1 4 HIS 4 9 9 HIS HIS B . n B 1 5 VAL 5 10 10 VAL VAL B . n B 1 6 PHE 6 11 11 PHE PHE B . n B 1 7 ALA 7 12 12 ALA ALA B . n B 1 8 VAL 8 13 13 VAL VAL B . n B 1 9 GLU 9 14 14 GLU GLU B . n B 1 10 SER 10 15 15 SER SER B . n B 1 11 ILE 11 16 16 ILE ILE B . n B 1 12 GLU 12 17 17 GLU GLU B . n B 1 13 LYS 13 18 18 LYS LYS B . n B 1 14 LYS 14 19 19 LYS LYS B . n B 1 15 ARG 15 20 20 ARG ARG B . n B 1 16 ILE 16 21 21 ILE ILE B . n B 1 17 ARG 17 22 22 ARG ARG B . n B 1 18 LYS 18 23 23 LYS LYS B . n B 1 19 GLY 19 24 24 GLY GLY B . n B 1 20 ARG 20 25 25 ARG ARG B . n B 1 21 VAL 21 26 26 VAL VAL B . n B 1 22 GLU 22 27 27 GLU GLU B . n B 1 23 TYR 23 28 28 TYR TYR B . n B 1 24 LEU 24 29 29 LEU LEU B . n B 1 25 VAL 25 30 30 VAL VAL B . n B 1 26 LYS 26 31 31 LYS LYS B . n B 1 27 TRP 27 32 32 TRP TRP B . n B 1 28 ARG 28 33 33 ARG ARG B . n B 1 29 GLY 29 34 34 GLY GLY B . n B 1 30 TRP 30 35 35 TRP TRP B . n B 1 31 SER 31 36 36 SER SER B . n B 1 32 PRO 32 37 37 PRO PRO B . n B 1 33 LYS 33 38 38 LYS LYS B . n B 1 34 TYR 34 39 39 TYR TYR B . n B 1 35 ASN 35 40 40 ASN ASN B . n B 1 36 THR 36 41 41 THR THR B . n B 1 37 TRP 37 42 42 TRP TRP B . n B 1 38 GLU 38 43 43 GLU GLU B . n B 1 39 PRO 39 44 44 PRO PRO B . n B 1 40 GLU 40 45 45 GLU GLU B . n B 1 41 GLU 41 46 46 GLU GLU B . n B 1 42 ASN 42 47 47 ASN ASN B . n B 1 43 ILE 43 48 48 ILE ILE B . n B 1 44 LEU 44 49 49 LEU LEU B . n B 1 45 ASP 45 50 50 ASP ASP B . n B 1 46 PRO 46 51 51 PRO PRO B . n B 1 47 ARG 47 52 52 ARG ARG B . n B 1 48 LEU 48 53 53 LEU LEU B . n B 1 49 LEU 49 54 54 LEU LEU B . n B 1 50 ILE 50 55 55 ILE ILE B . n B 1 51 ALA 51 56 56 ALA ALA B . n B 1 52 PHE 52 57 57 PHE PHE B . n B 1 53 GLN 53 58 58 GLN GLN B . n B 1 54 ASN 54 59 59 ASN ASN B . n B 1 55 ARG 55 60 60 ARG ARG B . n B 1 56 GLU 56 61 61 GLU GLU B . n B 1 57 ARG 57 62 62 ARG ARG B . n B 1 58 GLN 58 63 63 GLN GLN B . n B 1 59 GLU 59 64 ? ? ? B . n B 1 60 GLN 60 65 ? ? ? B . n C 2 1 5R0 1 0 0 5R0 5R0 C . n C 2 2 PHE 2 1 1 PHE PHE C . n C 2 3 ALA 3 2 2 ALA ALA C . n C 2 4 LEU 4 3 3 LEU LEU C . n C 2 5 ELY 5 4 4 ELY ELY C . n C 2 6 5R5 6 5 5 5R5 5R5 C . n D 2 1 5R0 1 0 0 5R0 5R0 D . n D 2 2 PHE 2 1 1 PHE PHE D . n D 2 3 ALA 3 2 2 ALA ALA D . n D 2 4 LEU 4 3 3 LEU LEU D . n D 2 5 ELY 5 4 4 ELY ELY D . n D 2 6 5R5 6 5 5 5R5 5R5 D . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 UNX 1 101 103 UNX UNX A . F 3 UNX 1 102 104 UNX UNX A . G 3 UNX 1 103 105 UNX UNX A . H 3 UNX 1 101 103 UNX UNX B . I 3 UNX 1 102 104 UNX UNX B . J 3 UNX 1 103 105 UNX UNX B . K 3 UNX 1 104 106 UNX UNX B . L 3 UNX 1 105 107 UNX UNX B . M 4 HOH 1 201 201 HOH HOH A . M 4 HOH 2 202 202 HOH HOH A . M 4 HOH 3 203 203 HOH HOH A . M 4 HOH 4 204 204 HOH HOH A . M 4 HOH 5 205 205 HOH HOH A . M 4 HOH 6 206 206 HOH HOH A . M 4 HOH 7 207 207 HOH HOH A . M 4 HOH 8 208 208 HOH HOH A . M 4 HOH 9 209 209 HOH HOH A . M 4 HOH 10 210 210 HOH HOH A . M 4 HOH 11 211 211 HOH HOH A . M 4 HOH 12 212 212 HOH HOH A . M 4 HOH 13 213 213 HOH HOH A . M 4 HOH 14 214 214 HOH HOH A . M 4 HOH 15 215 215 HOH HOH A . M 4 HOH 16 216 216 HOH HOH A . M 4 HOH 17 217 217 HOH HOH A . M 4 HOH 18 218 218 HOH HOH A . M 4 HOH 19 219 219 HOH HOH A . M 4 HOH 20 220 220 HOH HOH A . M 4 HOH 21 221 221 HOH HOH A . M 4 HOH 22 222 222 HOH HOH A . M 4 HOH 23 223 223 HOH HOH A . M 4 HOH 24 224 224 HOH HOH A . M 4 HOH 25 225 225 HOH HOH A . M 4 HOH 26 226 226 HOH HOH A . M 4 HOH 27 227 227 HOH HOH A . M 4 HOH 28 228 228 HOH HOH A . M 4 HOH 29 229 229 HOH HOH A . M 4 HOH 30 230 230 HOH HOH A . M 4 HOH 31 231 231 HOH HOH A . M 4 HOH 32 232 232 HOH HOH A . M 4 HOH 33 233 233 HOH HOH A . M 4 HOH 34 234 234 HOH HOH A . M 4 HOH 35 235 235 HOH HOH A . M 4 HOH 36 236 236 HOH HOH A . M 4 HOH 37 237 237 HOH HOH A . M 4 HOH 38 238 238 HOH HOH A . M 4 HOH 39 239 239 HOH HOH A . M 4 HOH 40 240 240 HOH HOH A . M 4 HOH 41 241 241 HOH HOH A . M 4 HOH 42 242 242 HOH HOH A . M 4 HOH 43 243 243 HOH HOH A . M 4 HOH 44 244 244 HOH HOH A . M 4 HOH 45 245 245 HOH HOH A . M 4 HOH 46 246 246 HOH HOH A . M 4 HOH 47 247 247 HOH HOH A . M 4 HOH 48 248 248 HOH HOH A . M 4 HOH 49 249 250 HOH HOH A . M 4 HOH 50 250 251 HOH HOH A . M 4 HOH 51 251 252 HOH HOH A . M 4 HOH 52 252 253 HOH HOH A . M 4 HOH 53 253 254 HOH HOH A . M 4 HOH 54 254 255 HOH HOH A . M 4 HOH 55 255 256 HOH HOH A . M 4 HOH 56 256 257 HOH HOH A . M 4 HOH 57 257 258 HOH HOH A . N 4 HOH 1 201 201 HOH HOH B . N 4 HOH 2 202 202 HOH HOH B . N 4 HOH 3 203 203 HOH HOH B . N 4 HOH 4 204 204 HOH HOH B . N 4 HOH 5 205 205 HOH HOH B . N 4 HOH 6 206 206 HOH HOH B . N 4 HOH 7 207 207 HOH HOH B . N 4 HOH 8 208 208 HOH HOH B . N 4 HOH 9 209 209 HOH HOH B . N 4 HOH 10 210 210 HOH HOH B . N 4 HOH 11 211 211 HOH HOH B . N 4 HOH 12 212 212 HOH HOH B . N 4 HOH 13 213 213 HOH HOH B . N 4 HOH 14 214 214 HOH HOH B . N 4 HOH 15 215 215 HOH HOH B . N 4 HOH 16 216 216 HOH HOH B . N 4 HOH 17 217 217 HOH HOH B . N 4 HOH 18 218 218 HOH HOH B . N 4 HOH 19 219 219 HOH HOH B . N 4 HOH 20 220 220 HOH HOH B . N 4 HOH 21 221 221 HOH HOH B . N 4 HOH 22 222 222 HOH HOH B . N 4 HOH 23 223 223 HOH HOH B . N 4 HOH 24 224 224 HOH HOH B . N 4 HOH 25 225 225 HOH HOH B . N 4 HOH 26 226 226 HOH HOH B . N 4 HOH 27 227 227 HOH HOH B . N 4 HOH 28 228 228 HOH HOH B . N 4 HOH 29 229 229 HOH HOH B . N 4 HOH 30 230 230 HOH HOH B . N 4 HOH 31 231 231 HOH HOH B . N 4 HOH 32 232 232 HOH HOH B . N 4 HOH 33 233 233 HOH HOH B . N 4 HOH 34 234 234 HOH HOH B . N 4 HOH 35 235 235 HOH HOH B . N 4 HOH 36 236 236 HOH HOH B . N 4 HOH 37 237 237 HOH HOH B . N 4 HOH 38 238 238 HOH HOH B . N 4 HOH 39 239 239 HOH HOH B . N 4 HOH 40 240 240 HOH HOH B . N 4 HOH 41 241 241 HOH HOH B . N 4 HOH 42 242 242 HOH HOH B . N 4 HOH 43 243 243 HOH HOH B . N 4 HOH 44 244 244 HOH HOH B . N 4 HOH 45 245 246 HOH HOH B . N 4 HOH 46 246 247 HOH HOH B . N 4 HOH 47 247 248 HOH HOH B . N 4 HOH 48 248 249 HOH HOH B . N 4 HOH 49 249 250 HOH HOH B . N 4 HOH 50 250 251 HOH HOH B . O 4 HOH 1 201 201 HOH HOH C . O 4 HOH 2 202 202 HOH HOH C . O 4 HOH 3 203 203 HOH HOH C . O 4 HOH 4 204 249 HOH HOH C . O 4 HOH 5 205 204 HOH HOH C . O 4 HOH 6 206 205 HOH HOH C . O 4 HOH 7 207 206 HOH HOH C . P 4 HOH 1 201 201 HOH HOH D . P 4 HOH 2 202 202 HOH HOH D . P 4 HOH 3 203 245 HOH HOH D . # _pdbx_molecule_features.prd_id PRD_002208 _pdbx_molecule_features.name UNC3866 _pdbx_molecule_features.type Oligopeptide _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_002208 C 2 PRD_002208 D # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,M,O 2 1 B,D,H,I,J,K,L,N,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1240 ? 1 MORE -6 ? 1 'SSA (A^2)' 4320 ? 2 'ABSA (A^2)' 1340 ? 2 MORE -6 ? 2 'SSA (A^2)' 4490 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-23 2 'Structure model' 1 1 2016-01-13 3 'Structure model' 1 2 2016-02-17 4 'Structure model' 1 3 2016-02-24 5 'Structure model' 2 0 2019-11-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' atom_site 2 5 'Structure model' chem_comp 3 5 'Structure model' diffrn_radiation_wavelength 4 5 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_atom_site.auth_atom_id' 2 5 'Structure model' '_atom_site.label_atom_id' 3 5 'Structure model' '_chem_comp.mon_nstd_flag' 4 5 'Structure model' '_chem_comp.name' 5 5 'Structure model' '_chem_comp.pdbx_synonyms' 6 5 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -17.6140 44.3827 5.4479 0.0269 0.0091 0.0259 -0.0039 0.0022 0.0007 2.2446 1.1528 3.5625 0.3394 -0.2863 0.8125 0.0183 0.0351 -0.0757 -0.1153 0.0238 -0.1379 -0.0956 0.1602 -0.0422 'X-RAY DIFFRACTION' 2 ? refined -38.7264 33.6792 8.9303 0.0230 0.0546 0.0251 -0.0081 0.0090 -0.0075 3.9104 5.0650 2.4453 2.4020 -0.6834 -0.4104 0.0178 -0.2141 -0.2270 0.2322 -0.1629 -0.0305 0.1298 -0.1698 0.1451 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 6 A 59 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 6 B 63 ? ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.1 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id C _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 207 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.17 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 18 ? CE ? A LYS 13 CE 2 1 Y 1 A LYS 18 ? NZ ? A LYS 13 NZ 3 1 Y 1 A LYS 23 ? CE ? A LYS 18 CE 4 1 Y 1 A LYS 23 ? NZ ? A LYS 18 NZ 5 1 Y 1 A ASN 59 ? C ? A ASN 54 C 6 1 Y 1 A ASN 59 ? O ? A ASN 54 O 7 1 Y 1 A ASN 59 ? CB ? A ASN 54 CB 8 1 Y 1 A ASN 59 ? CG ? A ASN 54 CG 9 1 Y 1 A ASN 59 ? OD1 ? A ASN 54 OD1 10 1 Y 1 A ASN 59 ? ND2 ? A ASN 54 ND2 11 1 Y 1 B LYS 18 ? CE ? B LYS 13 CE 12 1 Y 1 B LYS 18 ? NZ ? B LYS 13 NZ 13 1 Y 1 B LYS 23 ? CD ? B LYS 18 CD 14 1 Y 1 B LYS 23 ? CE ? B LYS 18 CE 15 1 Y 1 B LYS 23 ? NZ ? B LYS 18 NZ 16 1 Y 1 B LYS 38 ? NZ ? B LYS 33 NZ 17 1 Y 1 B GLN 58 ? CD ? B GLN 53 CD 18 1 Y 1 B GLN 58 ? OE1 ? B GLN 53 OE1 19 1 Y 1 B GLN 58 ? NE2 ? B GLN 53 NE2 20 1 Y 1 B ARG 60 ? CG ? B ARG 55 CG 21 1 Y 1 B ARG 60 ? CD ? B ARG 55 CD 22 1 Y 1 B ARG 60 ? NE ? B ARG 55 NE 23 1 Y 1 B ARG 60 ? CZ ? B ARG 55 CZ 24 1 Y 1 B ARG 60 ? NH1 ? B ARG 55 NH1 25 1 Y 1 B ARG 60 ? NH2 ? B ARG 55 NH2 26 1 Y 1 B ARG 62 ? CG ? B ARG 57 CG 27 1 Y 1 B ARG 62 ? CD ? B ARG 57 CD 28 1 Y 1 B ARG 62 ? NE ? B ARG 57 NE 29 1 Y 1 B ARG 62 ? CZ ? B ARG 57 CZ 30 1 Y 1 B ARG 62 ? NH1 ? B ARG 57 NH1 31 1 Y 1 B ARG 62 ? NH2 ? B ARG 57 NH2 32 1 Y 1 B GLN 63 ? C ? B GLN 58 C 33 1 Y 1 B GLN 63 ? O ? B GLN 58 O 34 1 Y 1 B GLN 63 ? CB ? B GLN 58 CB 35 1 Y 1 B GLN 63 ? CG ? B GLN 58 CG 36 1 Y 1 B GLN 63 ? CD ? B GLN 58 CD 37 1 Y 1 B GLN 63 ? OE1 ? B GLN 58 OE1 38 1 Y 1 B GLN 63 ? NE2 ? B GLN 58 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 60 ? A ARG 55 2 1 Y 1 A GLU 61 ? A GLU 56 3 1 Y 1 A ARG 62 ? A ARG 57 4 1 Y 1 A GLN 63 ? A GLN 58 5 1 Y 1 A GLU 64 ? A GLU 59 6 1 Y 1 A GLN 65 ? A GLN 60 7 1 Y 1 B GLU 64 ? B GLU 59 8 1 Y 1 B GLN 65 ? B GLN 60 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH #