HEADER BIOSYNTHETIC PROTEIN 12-NOV-15 5EQ8 TITLE CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA HISTIDINOL-PHOSPHATE TITLE 2 PHOSPHATASE (MTHPP) IN COMPLEX WITH L-HISTIDINOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSITOL MONOPHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEDICAGO TRUNCATULA; SOURCE 3 ORGANISM_COMMON: BARREL MEDIC; SOURCE 4 ORGANISM_TAXID: 3880; SOURCE 5 GENE: MTR_3G117220; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS HISTIDINE BIOSYNTHESIS, METABOLIC PATHWAYS, DIMER, PLANT, KEYWDS 2 BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.RUSZKOWSKI,Z.DAUTER REVDAT 2 01-JUN-16 5EQ8 1 JRNL REVDAT 1 30-MAR-16 5EQ8 0 JRNL AUTH M.RUSZKOWSKI,Z.DAUTER JRNL TITL STRUCTURAL STUDIES OF MEDICAGO TRUNCATULA HISTIDINOL JRNL TITL 2 PHOSPHATE PHOSPHATASE FROM INOSITOL MONOPHOSPHATASE JRNL TITL 3 SUPERFAMILY REVEAL DETAILS OF PENULTIMATE STEP OF HISTIDINE JRNL TITL 4 BIOSYNTHESIS IN PLANTS. JRNL REF J.BIOL.CHEM. V. 291 9960 2016 JRNL REFN ESSN 1083-351X JRNL PMID 26994138 JRNL DOI 10.1074/JBC.M115.708727 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 58127 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.119 REMARK 3 R VALUE (WORKING SET) : 0.118 REMARK 3 FREE R VALUE : 0.156 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1187 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4045 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2014 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.83000 REMARK 3 B22 (A**2) : 0.83000 REMARK 3 B33 (A**2) : -1.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.040 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.041 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.887 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.986 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2165 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2048 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2957 ; 2.000 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4719 ; 1.107 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 279 ; 6.748 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;36.408 ;24.615 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 342 ;12.068 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;12.418 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 334 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2528 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 501 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1095 ; 2.831 ; 1.777 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1096 ; 2.830 ; 1.779 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1381 ; 3.350 ; 2.665 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1382 ; 3.349 ; 2.666 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1069 ; 4.269 ; 2.276 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1070 ; 4.267 ; 2.276 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1577 ; 4.917 ; 3.228 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2663 ; 5.168 ;16.875 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2520 ; 4.812 ;15.959 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4211 ; 3.840 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 71 ;36.102 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4367 ;15.029 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5EQ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59314 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 16.00 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 15.40 REMARK 200 R MERGE FOR SHELL (I) : 1.35900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 3350, 0.1 M BIS-TRIS PH 6.5, REMARK 280 0.2 M AMMONIUM ACETATE, 10 MM MAGNESIUM ACETATE. CRYSTALS WERE REMARK 280 INCUBATED FOR 8 MIN WITH 5 MM HISTIDINOL-PHOSPHATE AND FLASH- REMARK 280 FROZEN IN PARATON-N, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.64800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.64800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.64800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.64800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.64800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.64800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.64800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.64800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 507 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 50 REMARK 465 ASN A 51 REMARK 465 ALA A 52 REMARK 465 MET A 53 REMARK 465 SER A 54 REMARK 465 SER A 55 REMARK 465 SER A 56 REMARK 465 SER A 57 REMARK 465 SER A 58 REMARK 465 PRO A 59 REMARK 465 PRO A 60 REMARK 465 HIS A 61 REMARK 465 ILE A 92 REMARK 465 ILE A 93 REMARK 465 HIS A 94 REMARK 465 LYS A 95 REMARK 465 ASN A 96 REMARK 465 ASP A 97 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 244 N - CA - C ANGL. DEV. = 17.5 DEGREES REMARK 500 CYS A 245 C - N - CA ANGL. DEV. = 20.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 88 42.33 -95.71 REMARK 500 ASN A 89 31.39 -98.79 REMARK 500 PRO A 159 46.99 -86.75 REMARK 500 PRO A 159 46.99 -86.66 REMARK 500 LEU A 222 38.33 -99.18 REMARK 500 CYS A 245 32.98 -142.51 REMARK 500 ASP A 246 -138.13 61.26 REMARK 500 ASP A 246 -138.13 47.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 244 CYS A 245 -145.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HSO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EQ7 RELATED DB: PDB REMARK 900 RELATED ID: 5EQ9 RELATED DB: PDB REMARK 900 RELATED ID: 5EQA RELATED DB: PDB DBREF 5EQ8 A 53 326 UNP G7J7Q5 G7J7Q5_MEDTR 53 326 SEQADV 5EQ8 SER A 50 UNP G7J7Q5 EXPRESSION TAG SEQADV 5EQ8 ASN A 51 UNP G7J7Q5 EXPRESSION TAG SEQADV 5EQ8 ALA A 52 UNP G7J7Q5 EXPRESSION TAG SEQRES 1 A 277 SER ASN ALA MET SER SER SER SER SER PRO PRO HIS GLN SEQRES 2 A 277 LEU ASN HIS PHE SER ASP VAL ALA ASN LYS ALA ALA ASN SEQRES 3 A 277 ALA ALA GLY ASP VAL ILE ARG LYS TYR PHE ARG LYS ASN SEQRES 4 A 277 ASN PHE ASP ILE ILE HIS LYS ASN ASP LEU SER PRO VAL SEQRES 5 A 277 THR ILE ALA ASP GLN SER ALA GLU GLU ALA MET VAL SER SEQRES 6 A 277 VAL ILE LEU ASP ASN PHE PRO SER HIS ALA VAL TYR GLY SEQRES 7 A 277 GLU GLU LYS GLY TRP ARG CYS LYS GLN ASP SER ALA ASP SEQRES 8 A 277 TYR VAL TRP VAL LEU ASP PRO ILE ASP GLY THR LYS SER SEQRES 9 A 277 PHE ILE THR GLY MLZ PRO LEU PHE GLY THR LEU ILE ALA SEQRES 10 A 277 LEU LEU GLN ASN GLY THR PRO ILE LEU GLY ILE ILE ASP SEQRES 11 A 277 GLN PRO VAL LEU LYS GLU ARG TRP ILE GLY ILE THR GLY SEQRES 12 A 277 LYS ARG THR THR LEU ASN GLY GLN GLU VAL SER THR ARG SEQRES 13 A 277 THR CYS ALA ASP LEU SER GLN ALA TYR LEU TYR THR THR SEQRES 14 A 277 SER PRO HIS LEU PHE SER GLY ASP ALA GLU GLU ALA PHE SEQRES 15 A 277 ILE ARG VAL ARG ASP LYS VAL LYS ILE PRO LEU TYR GLY SEQRES 16 A 277 CYS ASP CYS TYR ALA TYR ALA LEU LEU SER SER GLY PHE SEQRES 17 A 277 VAL ASP LEU VAL VAL GLU SER GLY LEU LYS PRO TYR ASP SEQRES 18 A 277 PHE LEU ALA LEU ILE PRO VAL ILE GLU GLY SER GLY GLY SEQRES 19 A 277 VAL ILE THR ASP TRP LYS GLY HIS GLN LEU ARG TRP GLU SEQRES 20 A 277 ALA SER PRO LEU SER ILE ALA THR SER PHE ASN VAL VAL SEQRES 21 A 277 ALA ALA GLY ASP LYS GLN ILE HIS GLN GLN ALA LEU ASP SEQRES 22 A 277 SER LEU GLN TRP MODRES 5EQ8 MLZ A 158 LYS MODIFIED RESIDUE HET MLZ A 158 20 HET HSO A 401 10 HET CL A 402 1 HETNAM MLZ N-METHYL-LYSINE HETNAM HSO L-HISTIDINOL HETNAM CL CHLORIDE ION FORMUL 1 MLZ C7 H16 N2 O2 FORMUL 2 HSO C6 H12 N3 O 1+ FORMUL 3 CL CL 1- FORMUL 4 HOH *280(H2 O) HELIX 1 AA1 GLN A 62 PHE A 85 1 24 HELIX 2 AA2 SER A 99 PHE A 120 1 22 HELIX 3 AA3 GLY A 150 THR A 156 1 7 HELIX 4 AA4 ASP A 209 GLN A 212 5 4 HELIX 5 AA5 GLY A 225 ASP A 236 1 12 HELIX 6 AA6 ASP A 246 SER A 255 1 10 HELIX 7 AA7 LYS A 267 LEU A 272 5 6 HELIX 8 AA8 ALA A 273 GLY A 280 1 8 HELIX 9 AA9 ASP A 313 GLN A 325 1 13 SHEET 1 AA1 8 GLY A 131 ARG A 133 0 SHEET 2 AA1 8 ALA A 124 GLY A 127 -1 N VAL A 125 O ARG A 133 SHEET 3 AA1 8 TYR A 141 ASP A 149 1 O TRP A 143 N ALA A 124 SHEET 4 AA1 8 GLY A 162 GLN A 169 -1 O GLY A 162 N ASP A 149 SHEET 5 AA1 8 THR A 172 GLN A 180 -1 O ILE A 174 N LEU A 167 SHEET 6 AA1 8 GLU A 185 ILE A 190 -1 O GLU A 185 N GLN A 180 SHEET 7 AA1 8 THR A 196 LEU A 197 -1 O THR A 196 N ILE A 188 SHEET 8 AA1 8 GLN A 200 GLU A 201 -1 O GLN A 200 N LEU A 197 SHEET 1 AA2 5 ILE A 240 TYR A 243 0 SHEET 2 AA2 5 TYR A 214 THR A 217 1 N LEU A 215 O LEU A 242 SHEET 3 AA2 5 LEU A 260 LEU A 266 1 O LEU A 260 N TYR A 216 SHEET 4 AA2 5 PHE A 306 ALA A 311 -1 O ALA A 310 N VAL A 261 SHEET 5 AA2 5 VAL A 284 THR A 286 -1 N VAL A 284 O ALA A 311 LINK C GLY A 157 N AMLZ A 158 1555 1555 1.32 LINK C GLY A 157 N BMLZ A 158 1555 1555 1.32 LINK C AMLZ A 158 N PRO A 159 1555 1555 1.33 LINK C BMLZ A 158 N PRO A 159 1555 1555 1.33 LINK CM AMLZ A 158 SG ACYS A 245 1555 7555 1.79 SITE 1 AC1 11 ASP A 149 THR A 218 LEU A 222 ASP A 246 SITE 2 AC1 11 GLU A 263 SER A 264 GLY A 265 LEU A 266 SITE 3 AC1 11 HOH A 565 HOH A 568 HOH A 610 SITE 1 AC2 3 PHE A 120 PRO A 121 SER A 122 CRYST1 87.296 87.296 61.747 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011455 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011455 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016195 0.00000