HEADER HYDROLASE/HYDROLASE INHIBITOR 13-NOV-15 5EQR TITLE CRYSTAL STRUCTURE OF A GENOTYPE 1A/3A CHIMERIC HCV NS3/4A PROTEASE IN TITLE 2 COMPLEX WITH DANOPREVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 3 ORGANISM_TAXID: 11103; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-DE3; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28-A KEYWDS DANOPREVIR, DRUG RESISTANCE, HCV PROTEASE INHIBITOR, GENOTYPE 3, KEYWDS 2 HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.SOUMANA,N.K.YILMAZ,A.ALI,K.L.PRACHANRONARONG,C.A.SCHIFFER REVDAT 5 06-MAR-24 5EQR 1 COMPND HETNAM REVDAT 4 11-DEC-19 5EQR 1 REMARK REVDAT 3 27-SEP-17 5EQR 1 REMARK REVDAT 2 30-NOV-16 5EQR 1 JRNL REVDAT 1 23-NOV-16 5EQR 0 JRNL AUTH D.I.SOUMANA,N.KURT YILMAZ,A.ALI,K.L.PRACHANRONARONG, JRNL AUTH 2 C.A.SCHIFFER JRNL TITL MOLECULAR AND DYNAMIC MECHANISM UNDERLYING DRUG RESISTANCE JRNL TITL 2 IN GENOTYPE 3 HEPATITIS C NS3/4A PROTEASE. JRNL REF J.AM.CHEM.SOC. V. 138 11850 2016 JRNL REFN ESSN 1520-5126 JRNL PMID 27512818 JRNL DOI 10.1021/JACS.6B06454 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.P.ROMANO,A.ALI,C.AYDIN,D.SOUMANA,A.OZEN,L.M.DEVEAU, REMARK 1 AUTH 2 C.SILVER,H.CAO,A.NEWTON,C.J.PETROPOULOS,W.HUANG,C.A.SCHIFFER REMARK 1 TITL THE MOLECULAR BASIS OF DRUG RESISTANCE AGAINST HEPATITIS C REMARK 1 TITL 2 VIRUS NS3/4A PROTEASE INHIBITORS. REMARK 1 REF PLOS PATHOG. V. 8 02832 2012 REMARK 1 REFN ESSN 1553-7374 REMARK 1 PMID 22910833 REMARK 1 DOI 10.1371/JOURNAL.PPAT.1002832 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 13423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1338 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 0.0000 - 4.2125 0.99 1379 150 0.1617 0.1649 REMARK 3 2 4.2125 - 3.3458 0.99 1306 142 0.1392 0.1682 REMARK 3 3 3.3458 - 2.9234 0.97 1274 144 0.1644 0.1796 REMARK 3 4 2.9234 - 2.6564 0.94 1218 135 0.1788 0.2345 REMARK 3 5 2.6564 - 2.4662 0.94 1203 152 0.1782 0.2101 REMARK 3 6 2.4662 - 2.3209 0.93 1205 124 0.1661 0.2456 REMARK 3 7 2.3209 - 2.2047 0.93 1205 125 0.1728 0.2018 REMARK 3 8 2.2047 - 2.1088 0.92 1171 131 0.1678 0.2259 REMARK 3 9 2.1088 - 2.0276 0.91 1164 126 0.1834 0.2659 REMARK 3 10 2.0276 - 1.9577 0.76 960 109 0.1932 0.2810 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 1552 REMARK 3 ANGLE : 1.336 2116 REMARK 3 CHIRALITY : 0.053 243 REMARK 3 PLANARITY : 0.007 266 REMARK 3 DIHEDRAL : 24.836 604 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 982 THROUGH 999 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5463 -11.1620 8.5357 REMARK 3 T TENSOR REMARK 3 T11: 0.2443 T22: 0.1217 REMARK 3 T33: 0.1351 T12: -0.0308 REMARK 3 T13: 0.0484 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.0699 L22: 3.3990 REMARK 3 L33: 2.9839 L12: -0.5240 REMARK 3 L13: -0.8284 L23: 1.8590 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: 0.0663 S13: -0.0740 REMARK 3 S21: -0.2944 S22: 0.1013 S23: -0.2104 REMARK 3 S31: 0.3146 S32: 0.0191 S33: 0.0682 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1000 THROUGH 1032 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4984 -0.0512 17.5651 REMARK 3 T TENSOR REMARK 3 T11: 0.1198 T22: 0.1019 REMARK 3 T33: 0.1525 T12: -0.0395 REMARK 3 T13: 0.0254 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 2.8209 L22: 3.0488 REMARK 3 L33: 2.8618 L12: -1.2902 REMARK 3 L13: -1.3769 L23: 0.9102 REMARK 3 S TENSOR REMARK 3 S11: 0.0515 S12: -0.0106 S13: 0.0224 REMARK 3 S21: -0.1404 S22: -0.0317 S23: -0.1755 REMARK 3 S31: -0.0625 S32: 0.1190 S33: -0.0454 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1033 THROUGH 1091 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3140 -12.3364 19.4067 REMARK 3 T TENSOR REMARK 3 T11: 0.0781 T22: 0.1043 REMARK 3 T33: 0.1042 T12: 0.0082 REMARK 3 T13: -0.0006 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.7315 L22: 1.1972 REMARK 3 L33: 0.6244 L12: -0.0250 REMARK 3 L13: -0.2015 L23: 0.1401 REMARK 3 S TENSOR REMARK 3 S11: 0.0358 S12: 0.0263 S13: -0.0017 REMARK 3 S21: 0.0519 S22: -0.0093 S23: -0.0467 REMARK 3 S31: 0.0389 S32: 0.0422 S33: -0.0139 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1092 THROUGH 1118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2438 -2.5438 30.6943 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.1375 REMARK 3 T33: 0.1557 T12: -0.0125 REMARK 3 T13: 0.0163 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.0517 L22: 0.6099 REMARK 3 L33: 0.9868 L12: -0.0731 REMARK 3 L13: -0.3771 L23: -0.5510 REMARK 3 S TENSOR REMARK 3 S11: 0.0767 S12: -0.0891 S13: 0.1587 REMARK 3 S21: 0.0875 S22: -0.0311 S23: -0.0087 REMARK 3 S31: -0.1052 S32: 0.0631 S33: -0.0611 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1119 THROUGH 1134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3091 -1.9094 23.4234 REMARK 3 T TENSOR REMARK 3 T11: 0.0978 T22: 0.1844 REMARK 3 T33: 0.1729 T12: 0.0189 REMARK 3 T13: 0.0251 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.5809 L22: 0.3360 REMARK 3 L33: 2.6758 L12: -0.4119 REMARK 3 L13: -0.2680 L23: -0.1678 REMARK 3 S TENSOR REMARK 3 S11: 0.0032 S12: 0.0419 S13: 0.1166 REMARK 3 S21: 0.0896 S22: 0.0434 S23: 0.0339 REMARK 3 S31: -0.2286 S32: -0.2081 S33: -0.0497 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1135 THROUGH 1179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4197 -8.0778 25.1365 REMARK 3 T TENSOR REMARK 3 T11: 0.1165 T22: 0.1179 REMARK 3 T33: 0.1399 T12: -0.0104 REMARK 3 T13: 0.0121 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.9098 L22: 1.0574 REMARK 3 L33: 1.7541 L12: -0.0211 REMARK 3 L13: -0.8650 L23: 0.0739 REMARK 3 S TENSOR REMARK 3 S11: -0.0120 S12: 0.0356 S13: 0.0276 REMARK 3 S21: 0.0583 S22: 0.0130 S23: 0.0473 REMARK 3 S31: 0.0538 S32: -0.1344 S33: -0.0329 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EQR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14041 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES BUFFER PH 6.5, 4% (W/V) REMARK 280 AMMONIUM SULFATE, 20-26% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.48500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.99250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.24700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.99250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.48500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.24700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1014 CG CD OE1 OE2 REMARK 470 GLU A1018 CG CD OE1 OE2 REMARK 470 LYS A1026 CG CD CE NZ REMARK 470 LYS A1068 CG CD CE NZ REMARK 470 ARG A1092 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1161 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A1038 -168.07 -112.35 REMARK 500 PHE A1043 -162.64 -164.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1421 DISTANCE = 7.29 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 112.3 REMARK 620 3 CYS A1145 SG 111.4 119.9 REMARK 620 4 HIS A1149 ND1 124.6 91.6 95.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TSV A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EQS RELATED DB: PDB REMARK 900 RELATED ID: 5EQQ RELATED DB: PDB DBREF 5EQR A 1004 1179 UNP C1KIK8 C1KIK8_9HEPC 4 179 SEQADV 5EQR HIS A 982 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR MET A 983 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR ALA A 984 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR SER A 985 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR MET A 986 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR LYS A 987 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR LYS A 988 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR LYS A 989 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR GLY A 990 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR SER A 991 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR VAL A 992 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR VAL A 993 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR ILE A 994 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR VAL A 995 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR GLY A 996 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR ARG A 997 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR ILE A 998 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR ASN A 999 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR LEU A 1000 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR SER A 1001 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR GLY A 1002 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR ASP A 1003 UNP C1KIK8 EXPRESSION TAG SEQADV 5EQR GLU A 1013 UNP C1KIK8 LEU 13 CONFLICT SEQADV 5EQR GLU A 1014 UNP C1KIK8 LEU 14 CONFLICT SEQADV 5EQR GLN A 1017 UNP C1KIK8 ILE 17 CONFLICT SEQADV 5EQR GLU A 1018 UNP C1KIK8 ILE 18 CONFLICT SEQADV 5EQR GLN A 1021 UNP C1KIK8 LEU 21 CONFLICT SEQADV 5EQR THR A 1040 UNP C1KIK8 ALA 40 CONFLICT SEQADV 5EQR SER A 1047 UNP C1KIK8 CYS 47 CONFLICT SEQADV 5EQR LEU A 1052 UNP C1KIK8 CYS 52 CONFLICT SEQADV 5EQR THR A 1072 UNP C1KIK8 ILE 72 CONFLICT SEQADV 5EQR GLN A 1086 UNP C1KIK8 PRO 86 CONFLICT SEQADV 5EQR THR A 1123 UNP C1KIK8 ARG 123 CONFLICT SEQADV 5EQR LEU A 1132 UNP C1KIK8 ILE 132 CONFLICT SEQADV 5EQR SER A 1159 UNP C1KIK8 CYS 159 CONFLICT SEQADV 5EQR GLN A 1168 UNP C1KIK8 ASP 168 CONFLICT SEQRES 1 A 198 HIS MET ALA SER MET LYS LYS LYS GLY SER VAL VAL ILE SEQRES 2 A 198 VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA TYR ALA SEQRES 3 A 198 GLN GLN THR ARG GLY GLU GLU GLY CYS GLN GLU THR SER SEQRES 4 A 198 GLN THR GLY ARG ASP LYS ASN GLN VAL GLU GLY GLU VAL SEQRES 5 A 198 GLN ILE VAL SER THR ALA THR GLN THR PHE LEU ALA THR SEQRES 6 A 198 SER ILE ASN GLY VAL LEU TRP THR VAL TYR HIS GLY ALA SEQRES 7 A 198 GLY THR ARG THR ILE ALA SER PRO LYS GLY PRO VAL THR SEQRES 8 A 198 GLN MET TYR THR ASN VAL ASP LYS ASP LEU VAL GLY TRP SEQRES 9 A 198 GLN ALA PRO GLN GLY SER ARG SER LEU THR PRO CYS THR SEQRES 10 A 198 CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG HIS ALA SEQRES 11 A 198 ASP VAL ILE PRO VAL ARG ARG ARG GLY ASP SER THR GLY SEQRES 12 A 198 SER LEU LEU SER PRO ARG PRO LEU SER TYR LEU LYS GLY SEQRES 13 A 198 SER SER GLY GLY PRO LEU LEU CYS PRO ALA GLY HIS ALA SEQRES 14 A 198 VAL GLY ILE PHE ARG ALA ALA VAL SER THR ARG GLY VAL SEQRES 15 A 198 ALA LYS ALA VAL GLN PHE ILE PRO VAL GLU SER LEU GLU SEQRES 16 A 198 THR THR MET HET TSV A1201 95 HET ZN A1202 1 HET SO4 A1203 5 HETNAM TSV (2R,6S,12Z,13AS,14AR,16AS)-6-[(TERT-BUTOXYCARBONYL) HETNAM 2 TSV AMINO]-14A-[(CYCLOPROPYLSULFONYL)CARBAMOYL]-5,16- HETNAM 3 TSV DIOXO-1,2,3,5,6,7,8 ,9,10,11,13A,14,14A,15,16,16A- HETNAM 4 TSV HEXADECAHYDROCYCLOPROPA[E]PYRROLO[1,2-A][1, HETNAM 5 TSV 4]DIAZACYCLOPENTADECIN-2-YL 4-FLUORO-2H-ISOINDOLE-2- HETNAM 6 TSV CARBOXYLATE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETSYN TSV ITMN-191; DANOPREVIR FORMUL 2 TSV C35 H44 F N5 O9 S FORMUL 3 ZN ZN 2+ FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *121(H2 O) HELIX 1 AA1 HIS A 982 MET A 986 5 5 HELIX 2 AA2 GLY A 1012 GLY A 1023 1 12 HELIX 3 AA3 VAL A 1055 GLY A 1060 1 6 HELIX 4 AA4 SER A 1133 LEU A 1135 5 3 HELIX 5 AA5 VAL A 1172 MET A 1179 1 8 SHEET 1 AA1 7 TYR A1006 GLN A1009 0 SHEET 2 AA1 7 VAL A 993 ASN A 999 -1 N ASN A 999 O TYR A1006 SHEET 3 AA1 7 VAL A1033 SER A1037 -1 O ILE A1035 N VAL A 995 SHEET 4 AA1 7 THR A1042 ILE A1048 -1 O ALA A1045 N GLN A1034 SHEET 5 AA1 7 VAL A1051 THR A1054 -1 O TRP A1053 N THR A1046 SHEET 6 AA1 7 LEU A1082 GLN A1086 -1 O TRP A1085 N LEU A1052 SHEET 7 AA1 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 AA2 7 ASP A1103 VAL A1107 0 SHEET 2 AA2 7 VAL A1113 ARG A1118 -1 O ILE A1114 N LEU A1106 SHEET 3 AA2 7 THR A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 AA2 7 VAL A1163 PRO A1171 -1 O ALA A1164 N ARG A1130 SHEET 5 AA2 7 ALA A1150 THR A1160 -1 N ALA A1156 O GLN A1168 SHEET 6 AA2 7 PRO A1142 LEU A1144 -1 N LEU A1143 O VAL A1151 SHEET 7 AA2 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK SG CYS A1097 ZN ZN A1202 1555 1555 2.30 LINK SG CYS A1099 ZN ZN A1202 1555 1555 2.62 LINK SG CYS A1145 ZN ZN A1202 1555 1555 2.40 LINK ND1 HIS A1149 ZN ZN A1202 1555 1555 2.66 SITE 1 AC1 18 HIS A 982 GLN A1041 PHE A1043 HIS A1057 SITE 2 AC1 18 ASP A1079 ASP A1081 LEU A1135 LYS A1136 SITE 3 AC1 18 GLY A1137 SER A1138 SER A1139 PHE A1154 SITE 4 AC1 18 ARG A1155 ALA A1156 ALA A1157 GLN A1168 SITE 5 AC1 18 HOH A1327 HOH A1380 SITE 1 AC2 4 CYS A1097 CYS A1099 CYS A1145 HIS A1149 SITE 1 AC3 6 TYR A1006 GLN A1008 TYR A1056 HOH A1316 SITE 2 AC3 6 HOH A1363 HOH A1366 CRYST1 54.970 58.494 59.985 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018192 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016671 0.00000