HEADER TRANSFERASE 15-NOV-15 5ERQ TITLE GEPHYRIN E DOMAIN AT 1.55 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GEPHYRIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 318-736; COMPND 5 SYNONYM: PUTATIVE GLYCINE RECEPTOR-TUBULIN LINKER PROTEIN; COMPND 6 EC: 2.7.7.75,2.10.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: GPHN, GPH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MOLYBDENUM COFACTOR, TUNGSTEN COFACTOR, MOCO BIOSYNTHESIS, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.B.KASARAGOD,H.SCHINDELIN REVDAT 3 10-JAN-24 5ERQ 1 ATOM REVDAT 2 11-MAY-16 5ERQ 1 JRNL REVDAT 1 04-MAY-16 5ERQ 0 JRNL AUTH V.B.KASARAGOD,H.SCHINDELIN JRNL TITL STRUCTURAL FRAMEWORK FOR METAL INCORPORATION DURING JRNL TITL 2 MOLYBDENUM COFACTOR BIOSYNTHESIS. JRNL REF STRUCTURE V. 24 782 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 27112598 JRNL DOI 10.1016/J.STR.2016.02.023 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 71069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.3969 - 4.5302 0.98 2866 144 0.1567 0.1667 REMARK 3 2 4.5302 - 3.5965 1.00 2814 124 0.1159 0.1561 REMARK 3 3 3.5965 - 3.1421 0.99 2762 140 0.1309 0.1791 REMARK 3 4 3.1421 - 2.8549 1.00 2766 142 0.1445 0.2009 REMARK 3 5 2.8549 - 2.6503 1.00 2719 149 0.1459 0.1782 REMARK 3 6 2.6503 - 2.4940 0.99 2753 127 0.1515 0.1877 REMARK 3 7 2.4940 - 2.3692 1.00 2701 169 0.1391 0.1732 REMARK 3 8 2.3692 - 2.2660 0.98 2710 147 0.1398 0.1952 REMARK 3 9 2.2660 - 2.1788 0.99 2690 146 0.1425 0.1473 REMARK 3 10 2.1788 - 2.1036 0.99 2740 125 0.1490 0.1708 REMARK 3 11 2.1036 - 2.0379 0.99 2695 153 0.1444 0.1656 REMARK 3 12 2.0379 - 1.9796 0.98 2692 138 0.1595 0.1634 REMARK 3 13 1.9796 - 1.9275 0.99 2695 136 0.1701 0.2173 REMARK 3 14 1.9275 - 1.8805 0.99 2700 132 0.1731 0.2195 REMARK 3 15 1.8805 - 1.8377 0.99 2665 151 0.1814 0.2057 REMARK 3 16 1.8377 - 1.7986 0.97 2646 130 0.1924 0.2343 REMARK 3 17 1.7986 - 1.7626 0.98 2650 171 0.1902 0.2291 REMARK 3 18 1.7626 - 1.7294 0.98 2687 136 0.2040 0.2257 REMARK 3 19 1.7294 - 1.6985 0.98 2661 139 0.2162 0.2828 REMARK 3 20 1.6985 - 1.6697 0.98 2652 131 0.2289 0.2359 REMARK 3 21 1.6697 - 1.6428 0.98 2663 144 0.2372 0.2429 REMARK 3 22 1.6428 - 1.6175 0.98 2663 132 0.2485 0.3002 REMARK 3 23 1.6175 - 1.5937 0.98 2657 143 0.2517 0.2993 REMARK 3 24 1.5937 - 1.5712 0.98 2658 161 0.2607 0.2474 REMARK 3 25 1.5712 - 1.5500 0.98 2611 143 0.2770 0.2868 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3437 REMARK 3 ANGLE : 1.334 4697 REMARK 3 CHIRALITY : 0.056 546 REMARK 3 PLANARITY : 0.008 626 REMARK 3 DIHEDRAL : 12.710 1326 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 319 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8504 130.0945 108.0056 REMARK 3 T TENSOR REMARK 3 T11: 0.1544 T22: 0.1405 REMARK 3 T33: 0.1583 T12: 0.0471 REMARK 3 T13: -0.0127 T23: 0.0465 REMARK 3 L TENSOR REMARK 3 L11: 1.8848 L22: 3.5909 REMARK 3 L33: 7.1365 L12: -1.1328 REMARK 3 L13: -1.7874 L23: 4.3054 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: 0.0402 S13: -0.1156 REMARK 3 S21: -0.1348 S22: 0.1957 S23: -0.2203 REMARK 3 S31: 0.0538 S32: 0.4491 S33: -0.2237 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 350 THROUGH 506 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3492 131.1712 147.0035 REMARK 3 T TENSOR REMARK 3 T11: 0.1397 T22: 0.1776 REMARK 3 T33: 0.1608 T12: -0.0198 REMARK 3 T13: -0.0004 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.0713 L22: 0.3198 REMARK 3 L33: 1.8163 L12: 0.4523 REMARK 3 L13: -1.3569 L23: -0.4921 REMARK 3 S TENSOR REMARK 3 S11: 0.0953 S12: -0.1810 S13: -0.0481 REMARK 3 S21: 0.0795 S22: -0.1007 S23: 0.0423 REMARK 3 S31: -0.0774 S32: 0.1045 S33: -0.0051 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 507 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2585 139.9978 93.4894 REMARK 3 T TENSOR REMARK 3 T11: 0.1379 T22: 0.1761 REMARK 3 T33: 0.1548 T12: -0.0066 REMARK 3 T13: 0.0105 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.8931 L22: 0.9866 REMARK 3 L33: 3.7739 L12: -0.5467 REMARK 3 L13: 1.6914 L23: -0.8710 REMARK 3 S TENSOR REMARK 3 S11: -0.0612 S12: 0.1612 S13: 0.0143 REMARK 3 S21: -0.0838 S22: -0.0326 S23: -0.0939 REMARK 3 S31: -0.1364 S32: 0.1754 S33: 0.0924 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 551 THROUGH 580 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4244 140.6559 92.6298 REMARK 3 T TENSOR REMARK 3 T11: 0.2534 T22: 0.3508 REMARK 3 T33: 0.1938 T12: -0.0303 REMARK 3 T13: 0.0105 T23: 0.0345 REMARK 3 L TENSOR REMARK 3 L11: 3.4909 L22: 4.3296 REMARK 3 L33: 1.7572 L12: 0.2453 REMARK 3 L13: 1.0974 L23: -1.5244 REMARK 3 S TENSOR REMARK 3 S11: -0.1757 S12: 0.8871 S13: 0.1628 REMARK 3 S21: -0.7821 S22: 0.1017 S23: -0.1368 REMARK 3 S31: 0.0734 S32: 0.3343 S33: 0.0256 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 581 THROUGH 627 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4246 133.0930 94.9431 REMARK 3 T TENSOR REMARK 3 T11: 0.1335 T22: 0.2222 REMARK 3 T33: 0.1613 T12: 0.0234 REMARK 3 T13: 0.0453 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 3.3008 L22: 3.2055 REMARK 3 L33: 3.4478 L12: -0.1112 REMARK 3 L13: 0.2623 L23: 0.3020 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.3138 S13: 0.0681 REMARK 3 S21: -0.2854 S22: 0.0338 S23: -0.2785 REMARK 3 S31: -0.0259 S32: 0.3745 S33: -0.0205 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 628 THROUGH 686 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4380 118.6488 104.1133 REMARK 3 T TENSOR REMARK 3 T11: 0.2125 T22: 0.1450 REMARK 3 T33: 0.2113 T12: 0.0265 REMARK 3 T13: -0.0110 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.5413 L22: 2.2129 REMARK 3 L33: 0.8245 L12: 1.3999 REMARK 3 L13: 0.3222 L23: -0.0594 REMARK 3 S TENSOR REMARK 3 S11: -0.0702 S12: 0.0688 S13: -0.1284 REMARK 3 S21: -0.2268 S22: 0.0715 S23: 0.0634 REMARK 3 S31: 0.1973 S32: -0.0193 S33: -0.0087 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 687 THROUGH 712 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5949 117.6357 100.4648 REMARK 3 T TENSOR REMARK 3 T11: 0.3012 T22: 0.3159 REMARK 3 T33: 0.3474 T12: -0.0267 REMARK 3 T13: -0.0619 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 7.8075 L22: 7.0233 REMARK 3 L33: 0.6607 L12: -5.0654 REMARK 3 L13: -1.1700 L23: -0.1300 REMARK 3 S TENSOR REMARK 3 S11: 0.2268 S12: 0.9667 S13: 0.2141 REMARK 3 S21: -0.6330 S22: 0.0261 S23: 0.9032 REMARK 3 S31: 0.0916 S32: -0.4184 S33: -0.2502 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 713 THROUGH 736 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2337 109.2908 100.0400 REMARK 3 T TENSOR REMARK 3 T11: 0.3367 T22: 0.1275 REMARK 3 T33: 0.3001 T12: 0.0126 REMARK 3 T13: 0.0455 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 3.9849 L22: 2.7550 REMARK 3 L33: 4.3806 L12: 2.0038 REMARK 3 L13: 2.3867 L23: -1.0705 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: 0.1861 S13: -0.6103 REMARK 3 S21: -0.3883 S22: -0.0396 S23: -0.1147 REMARK 3 S31: 0.5662 S32: 0.0979 S33: 0.0779 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ERQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215419. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71703 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 43.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.80800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4PD0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 25% MPD, PH 4.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.83450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.64350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 56.86250 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.83450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.64350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.86250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.83450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.64350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.86250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.83450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.64350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.86250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 227.45000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1069 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1284 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1306 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1324 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1334 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1403 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1413 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1417 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 696 REMARK 465 SER A 697 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 579 O HOH A 903 1.58 REMARK 500 O HOH A 929 O HOH A 1297 2.10 REMARK 500 O HOH A 1158 O HOH A 1335 2.11 REMARK 500 O HOH A 1286 O HOH A 1394 2.16 REMARK 500 O HOH A 1019 O HOH A 1229 2.17 REMARK 500 O HOH A 930 O HOH A 1253 2.19 REMARK 500 O HOH A 1215 O HOH A 1305 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 945 O HOH A 1036 3557 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 319 102.11 174.49 REMARK 500 GLU A 578 64.96 -64.42 REMARK 500 LYS A 579 -46.18 -149.74 REMARK 500 LYS A 579 -52.10 -149.74 REMARK 500 ASP A 580 43.33 -65.34 REMARK 500 ASP A 580 39.77 -74.41 REMARK 500 HIS A 682 -113.94 40.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1415 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A1416 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A1417 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A1418 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1419 DISTANCE = 6.27 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 809 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 811 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 812 DBREF 5ERQ A 318 736 UNP Q03555 GEPH_RAT 318 736 SEQRES 1 A 419 MET SER PRO PHE PRO LEU THR SER MET ASP LYS ALA PHE SEQRES 2 A 419 ILE THR VAL LEU GLU MET THR PRO VAL LEU GLY THR GLU SEQRES 3 A 419 ILE ILE ASN TYR ARG ASP GLY MET GLY ARG VAL LEU ALA SEQRES 4 A 419 GLN ASP VAL TYR ALA LYS ASP ASN LEU PRO PRO PHE PRO SEQRES 5 A 419 ALA SER VAL LYS ASP GLY TYR ALA VAL ARG ALA ALA ASP SEQRES 6 A 419 GLY PRO GLY ASP ARG PHE ILE ILE GLY GLU SER GLN ALA SEQRES 7 A 419 GLY GLU GLN PRO THR GLN THR VAL MET PRO GLY GLN VAL SEQRES 8 A 419 MET ARG VAL THR THR GLY ALA PRO ILE PRO CYS GLY ALA SEQRES 9 A 419 ASP ALA VAL VAL GLN VAL GLU ASP THR GLU LEU ILE ARG SEQRES 10 A 419 GLU SER ASP ASP GLY THR GLU GLU LEU GLU VAL ARG ILE SEQRES 11 A 419 LEU VAL GLN ALA ARG PRO GLY GLN ASP ILE ARG PRO ILE SEQRES 12 A 419 GLY HIS ASP ILE LYS ARG GLY GLU CYS VAL LEU ALA LYS SEQRES 13 A 419 GLY THR HIS MET GLY PRO SER GLU ILE GLY LEU LEU ALA SEQRES 14 A 419 THR VAL GLY VAL THR GLU VAL GLU VAL ASN LYS PHE PRO SEQRES 15 A 419 VAL VAL ALA VAL MET SER THR GLY ASN GLU LEU LEU ASN SEQRES 16 A 419 PRO GLU ASP ASP LEU LEU PRO GLY LYS ILE ARG ASP SER SEQRES 17 A 419 ASN ARG SER THR LEU LEU ALA THR ILE GLN GLU HIS GLY SEQRES 18 A 419 TYR PRO THR ILE ASN LEU GLY ILE VAL GLY ASP ASN PRO SEQRES 19 A 419 ASP ASP LEU LEU ASN ALA LEU ASN GLU GLY ILE SER ARG SEQRES 20 A 419 ALA ASP VAL ILE ILE THR SER GLY GLY VAL SER MET GLY SEQRES 21 A 419 GLU LYS ASP TYR LEU LYS GLN VAL LEU ASP ILE ASP LEU SEQRES 22 A 419 HIS ALA GLN ILE HIS PHE GLY ARG VAL PHE MET LYS PRO SEQRES 23 A 419 GLY LEU PRO THR THR PHE ALA THR LEU ASP ILE ASP GLY SEQRES 24 A 419 VAL ARG LYS ILE ILE PHE ALA LEU PRO GLY ASN PRO VAL SEQRES 25 A 419 SER ALA VAL VAL THR CYS ASN LEU PHE VAL VAL PRO ALA SEQRES 26 A 419 LEU ARG LYS MET GLN GLY ILE LEU ASP PRO ARG PRO THR SEQRES 27 A 419 ILE ILE LYS ALA ARG LEU SER CYS ASP VAL LYS LEU ASP SEQRES 28 A 419 PRO ARG PRO GLU TYR HIS ARG CYS ILE LEU THR TRP HIS SEQRES 29 A 419 HIS GLN GLU PRO LEU PRO TRP ALA GLN SER THR GLY ASN SEQRES 30 A 419 GLN MET SER SER ARG LEU MET SER MET ARG SER ALA ASN SEQRES 31 A 419 GLY LEU LEU MET LEU PRO PRO LYS THR GLU GLN TYR VAL SEQRES 32 A 419 GLU LEU HIS LYS GLY GLU VAL VAL ASP VAL MET VAL ILE SEQRES 33 A 419 GLY ARG LEU HET ACT A 801 7 HET ACT A 802 7 HET ACT A 803 7 HET ACT A 804 7 HET ACT A 805 7 HET ACT A 806 7 HET ACT A 807 7 HET ACT A 808 7 HET ACT A 809 7 HET ACT A 810 7 HET MPD A 811 22 HET MPD A 812 22 HETNAM ACT ACETATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 2 ACT 10(C2 H3 O2 1-) FORMUL 12 MPD 2(C6 H14 O2) FORMUL 14 HOH *519(H2 O) HELIX 1 AA1 SER A 325 THR A 337 1 13 HELIX 2 AA2 ARG A 348 GLY A 350 5 3 HELIX 3 AA3 ARG A 379 GLY A 383 5 5 HELIX 4 AA4 GLY A 478 GLY A 489 1 12 HELIX 5 AA5 SER A 525 HIS A 537 1 13 HELIX 6 AA6 ASN A 550 ALA A 565 1 16 HELIX 7 AA7 TYR A 581 ASP A 589 1 9 HELIX 8 AA8 ASN A 627 PHE A 638 1 12 HELIX 9 AA9 PHE A 638 GLN A 647 1 10 HELIX 10 AB1 ARG A 699 MET A 703 1 5 SHEET 1 AA1 2 LEU A 323 THR A 324 0 SHEET 2 AA1 2 ARG A 598 VAL A 599 1 O ARG A 598 N THR A 324 SHEET 1 AA2 2 THR A 342 ASN A 346 0 SHEET 2 AA2 2 GLU A 492 ASN A 496 -1 O VAL A 495 N GLU A 343 SHEET 1 AA3 2 VAL A 359 TYR A 360 0 SHEET 2 AA3 2 CYS A 469 LEU A 471 -1 O LEU A 471 N VAL A 359 SHEET 1 AA4 2 ALA A 370 SER A 371 0 SHEET 2 AA4 2 ILE A 457 ARG A 458 -1 O ARG A 458 N ALA A 370 SHEET 1 AA5 6 ALA A 423 GLN A 426 0 SHEET 2 AA5 6 GLY A 375 VAL A 378 -1 N VAL A 378 O ALA A 423 SHEET 3 AA5 6 GLN A 407 VAL A 411 -1 O MET A 409 N ALA A 377 SHEET 4 AA5 6 GLY A 385 SER A 393 1 N SER A 393 O ARG A 410 SHEET 5 AA5 6 GLU A 442 ILE A 447 -1 O ILE A 447 N GLY A 385 SHEET 6 AA5 6 THR A 430 GLU A 435 -1 N GLU A 431 O ARG A 446 SHEET 1 AA6 6 THR A 541 VAL A 547 0 SHEET 2 AA6 6 VAL A 501 THR A 506 1 N SER A 505 O VAL A 547 SHEET 3 AA6 6 VAL A 567 SER A 571 1 O VAL A 567 N ALA A 502 SHEET 4 AA6 6 VAL A 617 LEU A 624 1 O LEU A 624 N THR A 570 SHEET 5 AA6 6 THR A 608 ILE A 614 -1 N LEU A 612 O LYS A 619 SHEET 6 AA6 6 GLN A 593 PHE A 596 -1 N GLN A 593 O THR A 611 SHEET 1 AA7 2 LEU A 510 LEU A 511 0 SHEET 2 AA7 2 ILE A 522 ARG A 523 1 O ILE A 522 N LEU A 511 SHEET 1 AA8 6 ILE A 656 LEU A 661 0 SHEET 2 AA8 6 TRP A 688 SER A 691 1 O ALA A 689 N ARG A 660 SHEET 3 AA8 6 GLU A 672 THR A 679 -1 N THR A 679 O TRP A 688 SHEET 4 AA8 6 GLY A 708 LEU A 712 -1 O LEU A 712 N GLU A 672 SHEET 5 AA8 6 VAL A 727 VAL A 732 -1 O MET A 731 N LEU A 709 SHEET 6 AA8 6 ILE A 656 LEU A 661 -1 N ALA A 659 O VAL A 728 SHEET 1 AA9 2 VAL A 665 LYS A 666 0 SHEET 2 AA9 2 GLU A 721 LEU A 722 -1 O LEU A 722 N VAL A 665 CISPEP 1 SER A 319 PRO A 320 0 -1.65 CISPEP 2 LEU A 365 PRO A 366 0 -9.11 CISPEP 3 LYS A 602 PRO A 603 0 -9.67 SITE 1 AC1 1 PHE A 600 SITE 1 AC2 3 CYS A 469 VAL A 470 SER A 702 SITE 1 AC3 1 HOH A 950 SITE 1 AC4 4 ARG A 564 ASP A 566 LYS A 619 HOH A1019 SITE 1 AC5 4 MET A 336 HOH A1100 HOH A1123 HOH A1232 SITE 1 AC6 1 HOH A1192 SITE 1 AC7 2 ASP A 613 GLY A 616 SITE 1 AC8 3 MPD A 811 HOH A 906 HOH A 974 SITE 1 AC9 4 GLU A 672 HIS A 674 HOH A 913 HOH A1208 SITE 1 AD1 6 SER A 480 PRO A 628 ARG A 675 ACT A 808 SITE 2 AD1 6 HOH A1040 HOH A1070 SITE 1 AD2 4 ILE A 417 PRO A 418 ALA A 421 HOH A1065 CRYST1 87.669 99.287 113.725 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011407 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010072 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008793 0.00000