HEADER TRANSCRIPTION 24-NOV-15 5EY1 TITLE CRYSTAL STRUCTURE OF CODY FROM STAPHYLOCOCCUS AUREUS WITH GTP AND ILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-SENSING TRANSCRIPTIONAL PLEIOTROPIC REPRESSOR CODY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN MU3 / ATCC SOURCE 3 700698); SOURCE 4 ORGANISM_TAXID: 418127; SOURCE 5 STRAIN: MU3 / ATCC 700698; SOURCE 6 GENE: CODY, SAHV_1245; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS GTP SENSING, PLEIOTROPIC TRANSCRIPTION REGULATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR A.HAN,K.Y.HWANG REVDAT 4 08-NOV-23 5EY1 1 JRNL REMARK REVDAT 3 16-NOV-16 5EY1 1 JRNL REVDAT 2 21-SEP-16 5EY1 1 JRNL REVDAT 1 14-SEP-16 5EY1 0 JRNL AUTH A.R.HAN,H.R.KANG,J.SON,D.H.KWON,S.KIM,W.C.LEE,H.K.SONG, JRNL AUTH 2 M.J.SONG,K.Y.HWANG JRNL TITL THE STRUCTURE OF THE PLEIOTROPIC TRANSCRIPTION REGULATOR JRNL TITL 2 CODY PROVIDES INSIGHT INTO ITS GTP-SENSING MECHANISM JRNL REF NUCLEIC ACIDS RES. V. 44 9483 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27596595 JRNL DOI 10.1093/NAR/GKW775 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.470 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 41162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2523 - 4.7454 1.00 3052 156 0.1785 0.1921 REMARK 3 2 4.7454 - 3.7691 0.99 2899 148 0.1492 0.1867 REMARK 3 3 3.7691 - 3.2934 1.00 2853 145 0.1584 0.1895 REMARK 3 4 3.2934 - 2.9926 0.99 2861 147 0.1743 0.2259 REMARK 3 5 2.9926 - 2.7783 0.99 2827 145 0.1882 0.2477 REMARK 3 6 2.7783 - 2.6146 0.99 2788 142 0.1768 0.2173 REMARK 3 7 2.6146 - 2.4837 0.99 2827 144 0.1861 0.2418 REMARK 3 8 2.4837 - 2.3757 0.99 2768 141 0.2033 0.2795 REMARK 3 9 2.3757 - 2.2843 0.98 2774 142 0.2050 0.2631 REMARK 3 10 2.2843 - 2.2055 0.98 2772 142 0.2143 0.2788 REMARK 3 11 2.2055 - 2.1365 0.98 2753 140 0.2236 0.2829 REMARK 3 12 2.1365 - 2.0755 0.98 2724 139 0.2525 0.2933 REMARK 3 13 2.0755 - 2.0208 0.97 2738 141 0.2692 0.3026 REMARK 3 14 2.0208 - 1.9715 0.90 2526 128 0.2954 0.3639 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3359 REMARK 3 ANGLE : 1.165 4530 REMARK 3 CHIRALITY : 0.046 541 REMARK 3 PLANARITY : 0.004 565 REMARK 3 DIHEDRAL : 19.623 1299 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5EY1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215684. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41162 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.34100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2B0L AND 2B18 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (V/V) 2-PROPANOL, 0.1 M TRI-SODIUM REMARK 280 CITRATE (PH 5.0), 26% PEG 400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.91200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.15050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.99600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.15050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.91200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.99600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 GLY A 196 REMARK 465 THR A 197 REMARK 465 ALA A 203 REMARK 465 SER A 204 REMARK 465 LYS A 205 REMARK 465 VAL A 206 REMARK 465 ALA A 207 REMARK 465 ASP A 208 REMARK 465 ARG A 209 REMARK 465 VAL A 210 REMARK 465 GLY A 211 REMARK 465 SER A 234 REMARK 465 LEU A 235 REMARK 465 GLY A 236 REMARK 465 MET A 237 REMARK 465 LYS A 238 REMARK 465 GLY A 239 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 LYS B 169 REMARK 465 ALA B 170 REMARK 465 ALA B 171 REMARK 465 ILE B 172 REMARK 465 THR B 173 REMARK 465 MET B 174 REMARK 465 ALA B 175 REMARK 465 ILE B 176 REMARK 465 ASN B 177 REMARK 465 SER B 178 REMARK 465 LEU B 179 REMARK 465 SER B 180 REMARK 465 TYR B 181 REMARK 465 SER B 182 REMARK 465 GLU B 183 REMARK 465 LYS B 184 REMARK 465 GLU B 185 REMARK 465 ALA B 186 REMARK 465 ILE B 187 REMARK 465 GLU B 188 REMARK 465 HIS B 189 REMARK 465 ILE B 190 REMARK 465 PHE B 191 REMARK 465 GLU B 192 REMARK 465 GLU B 193 REMARK 465 LEU B 194 REMARK 465 GLY B 195 REMARK 465 GLY B 196 REMARK 465 THR B 197 REMARK 465 GLU B 198 REMARK 465 GLY B 199 REMARK 465 LEU B 200 REMARK 465 LEU B 201 REMARK 465 ILE B 202 REMARK 465 ALA B 203 REMARK 465 SER B 204 REMARK 465 LYS B 205 REMARK 465 VAL B 206 REMARK 465 ALA B 207 REMARK 465 ASP B 208 REMARK 465 ARG B 209 REMARK 465 VAL B 210 REMARK 465 GLY B 211 REMARK 465 ILE B 212 REMARK 465 THR B 213 REMARK 465 ARG B 214 REMARK 465 SER B 215 REMARK 465 VAL B 216 REMARK 465 ILE B 217 REMARK 465 VAL B 218 REMARK 465 ASN B 219 REMARK 465 ALA B 220 REMARK 465 LEU B 221 REMARK 465 ARG B 222 REMARK 465 LYS B 223 REMARK 465 LEU B 224 REMARK 465 GLU B 225 REMARK 465 SER B 226 REMARK 465 ALA B 227 REMARK 465 GLY B 228 REMARK 465 VAL B 229 REMARK 465 ILE B 230 REMARK 465 GLU B 231 REMARK 465 SER B 232 REMARK 465 ARG B 233 REMARK 465 SER B 234 REMARK 465 LEU B 235 REMARK 465 GLY B 236 REMARK 465 MET B 237 REMARK 465 LYS B 238 REMARK 465 GLY B 239 REMARK 465 THR B 240 REMARK 465 PHE B 241 REMARK 465 ILE B 242 REMARK 465 LYS B 243 REMARK 465 VAL B 244 REMARK 465 LYS B 245 REMARK 465 LYS B 246 REMARK 465 GLU B 247 REMARK 465 LYS B 248 REMARK 465 PHE B 249 REMARK 465 LEU B 250 REMARK 465 ASP B 251 REMARK 465 GLU B 252 REMARK 465 LEU B 253 REMARK 465 GLU B 254 REMARK 465 LYS B 255 REMARK 465 SER B 256 REMARK 465 LYS B 257 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 77 O HOH B 401 2.06 REMARK 500 O HOH B 401 O HOH B 525 2.14 REMARK 500 OE1 GLU B 9 O HOH B 402 2.14 REMARK 500 O HOH A 516 O HOH A 537 2.16 REMARK 500 O2A GTP A 302 O HOH A 401 2.16 REMARK 500 O ILE A 202 O HOH A 402 2.17 REMARK 500 O ASP B 168 O HOH B 403 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LYS A 255 NH1 ARG B 69 3644 2.16 REMARK 500 O HOH A 451 O HOH A 484 4545 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 54 -89.89 -133.88 REMARK 500 LEU A 201 -159.67 -69.12 REMARK 500 PHE A 241 147.94 -176.43 REMARK 500 GLU A 247 12.14 -67.64 REMARK 500 ASN B 54 -89.59 -119.27 REMARK 500 ASN B 102 40.93 -109.53 REMARK 500 HIS B 132 -79.54 -126.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 566 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 567 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH A 568 DISTANCE = 7.56 ANGSTROMS REMARK 525 HOH A 569 DISTANCE = 8.20 ANGSTROMS REMARK 525 HOH B 561 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B 562 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH B 563 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B 564 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH B 565 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH B 566 DISTANCE = 7.69 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ILE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ILE B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTP B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5EY0 RELATED DB: PDB REMARK 900 RELATED ID: 5EY2 RELATED DB: PDB DBREF 5EY1 A 1 257 UNP A7X1N2 CODY_STAA1 1 257 DBREF 5EY1 B 1 257 UNP A7X1N2 CODY_STAA1 1 257 SEQADV 5EY1 HIS A -16 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS A -15 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS A -14 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS A -13 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS A -12 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS A -11 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 SER A -10 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 SER A -9 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 GLY A -8 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 LEU A -7 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 VAL A -6 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 PRO A -5 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 ARG A -4 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 GLY A -3 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 SER A -2 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS A -1 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 MET A 0 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS B -16 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS B -15 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS B -14 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS B -13 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS B -12 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS B -11 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 SER B -10 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 SER B -9 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 GLY B -8 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 LEU B -7 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 VAL B -6 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 PRO B -5 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 ARG B -4 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 GLY B -3 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 SER B -2 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 HIS B -1 UNP A7X1N2 EXPRESSION TAG SEQADV 5EY1 MET B 0 UNP A7X1N2 EXPRESSION TAG SEQRES 1 A 274 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 274 GLY SER HIS MET MET SER LEU LEU SER LYS THR ARG GLU SEQRES 3 A 274 LEU ASN THR LEU LEU GLN LYS HIS LYS GLY ILE ALA VAL SEQRES 4 A 274 ASP PHE LYS ASP VAL ALA GLN THR ILE SER SER VAL THR SEQRES 5 A 274 VAL THR ASN VAL PHE ILE VAL SER ARG ARG GLY LYS ILE SEQRES 6 A 274 LEU GLY SER SER LEU ASN GLU LEU LEU LYS SER GLN ARG SEQRES 7 A 274 ILE ILE GLN MET LEU GLU GLU ARG HIS ILE PRO SER GLU SEQRES 8 A 274 TYR THR GLU ARG LEU MET GLU VAL LYS GLN THR GLU SER SEQRES 9 A 274 ASN ILE ASP ILE ASP ASN VAL LEU THR VAL PHE PRO PRO SEQRES 10 A 274 GLU ASN ARG GLU LEU PHE ILE ASP SER ARG THR THR ILE SEQRES 11 A 274 PHE PRO ILE LEU GLY GLY GLY GLU ARG LEU GLY THR LEU SEQRES 12 A 274 VAL LEU GLY ARG VAL HIS ASP ASP PHE ASN GLU ASN ASP SEQRES 13 A 274 LEU VAL LEU GLY GLU TYR ALA ALA THR VAL ILE GLY MET SEQRES 14 A 274 GLU ILE LEU ARG GLU LYS HIS SER GLU VAL GLU LYS GLU SEQRES 15 A 274 ALA ARG ASP LYS ALA ALA ILE THR MET ALA ILE ASN SER SEQRES 16 A 274 LEU SER TYR SER GLU LYS GLU ALA ILE GLU HIS ILE PHE SEQRES 17 A 274 GLU GLU LEU GLY GLY THR GLU GLY LEU LEU ILE ALA SER SEQRES 18 A 274 LYS VAL ALA ASP ARG VAL GLY ILE THR ARG SER VAL ILE SEQRES 19 A 274 VAL ASN ALA LEU ARG LYS LEU GLU SER ALA GLY VAL ILE SEQRES 20 A 274 GLU SER ARG SER LEU GLY MET LYS GLY THR PHE ILE LYS SEQRES 21 A 274 VAL LYS LYS GLU LYS PHE LEU ASP GLU LEU GLU LYS SER SEQRES 22 A 274 LYS SEQRES 1 B 274 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 B 274 GLY SER HIS MET MET SER LEU LEU SER LYS THR ARG GLU SEQRES 3 B 274 LEU ASN THR LEU LEU GLN LYS HIS LYS GLY ILE ALA VAL SEQRES 4 B 274 ASP PHE LYS ASP VAL ALA GLN THR ILE SER SER VAL THR SEQRES 5 B 274 VAL THR ASN VAL PHE ILE VAL SER ARG ARG GLY LYS ILE SEQRES 6 B 274 LEU GLY SER SER LEU ASN GLU LEU LEU LYS SER GLN ARG SEQRES 7 B 274 ILE ILE GLN MET LEU GLU GLU ARG HIS ILE PRO SER GLU SEQRES 8 B 274 TYR THR GLU ARG LEU MET GLU VAL LYS GLN THR GLU SER SEQRES 9 B 274 ASN ILE ASP ILE ASP ASN VAL LEU THR VAL PHE PRO PRO SEQRES 10 B 274 GLU ASN ARG GLU LEU PHE ILE ASP SER ARG THR THR ILE SEQRES 11 B 274 PHE PRO ILE LEU GLY GLY GLY GLU ARG LEU GLY THR LEU SEQRES 12 B 274 VAL LEU GLY ARG VAL HIS ASP ASP PHE ASN GLU ASN ASP SEQRES 13 B 274 LEU VAL LEU GLY GLU TYR ALA ALA THR VAL ILE GLY MET SEQRES 14 B 274 GLU ILE LEU ARG GLU LYS HIS SER GLU VAL GLU LYS GLU SEQRES 15 B 274 ALA ARG ASP LYS ALA ALA ILE THR MET ALA ILE ASN SER SEQRES 16 B 274 LEU SER TYR SER GLU LYS GLU ALA ILE GLU HIS ILE PHE SEQRES 17 B 274 GLU GLU LEU GLY GLY THR GLU GLY LEU LEU ILE ALA SER SEQRES 18 B 274 LYS VAL ALA ASP ARG VAL GLY ILE THR ARG SER VAL ILE SEQRES 19 B 274 VAL ASN ALA LEU ARG LYS LEU GLU SER ALA GLY VAL ILE SEQRES 20 B 274 GLU SER ARG SER LEU GLY MET LYS GLY THR PHE ILE LYS SEQRES 21 B 274 VAL LYS LYS GLU LYS PHE LEU ASP GLU LEU GLU LYS SER SEQRES 22 B 274 LYS HET ILE A 301 9 HET GTP A 302 32 HET ILE B 301 9 HET GTP B 302 32 HETNAM ILE ISOLEUCINE HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 3 ILE 2(C6 H13 N O2) FORMUL 4 GTP 2(C10 H16 N5 O14 P3) FORMUL 7 HOH *335(H2 O) HELIX 1 AA1 SER A 2 HIS A 17 1 16 HELIX 2 AA2 ASP A 23 VAL A 36 1 14 HELIX 3 AA3 ASN A 54 LYS A 58 5 5 HELIX 4 AA4 SER A 59 ARG A 69 1 11 HELIX 5 AA5 PRO A 72 MET A 80 1 9 HELIX 6 AA6 PRO A 99 PHE A 106 5 8 HELIX 7 AA7 ASN A 136 LEU A 179 1 44 HELIX 8 AA8 SER A 180 PHE A 191 1 12 HELIX 9 AA9 THR A 213 ALA A 227 1 15 HELIX 10 AB1 LYS A 248 LYS A 255 1 8 HELIX 11 AB2 SER B 2 HIS B 17 1 16 HELIX 12 AB3 ASP B 23 VAL B 36 1 14 HELIX 13 AB4 ASN B 54 LYS B 58 5 5 HELIX 14 AB5 SER B 59 ARG B 69 1 11 HELIX 15 AB6 PRO B 72 GLU B 81 1 10 HELIX 16 AB7 PRO B 99 ARG B 103 5 5 HELIX 17 AB8 ASN B 136 ALA B 166 1 31 SHEET 1 AA1 5 ILE A 48 SER A 52 0 SHEET 2 AA1 5 ASN A 38 SER A 43 -1 N ILE A 41 O LEU A 49 SHEET 3 AA1 5 GLU A 121 ARG A 130 -1 O GLY A 129 N ASN A 38 SHEET 4 AA1 5 ARG A 110 GLY A 118 -1 N ILE A 116 O LEU A 123 SHEET 5 AA1 5 GLU A 86 ILE A 89 -1 N ILE A 89 O THR A 111 SHEET 1 AA2 2 ILE A 230 SER A 232 0 SHEET 2 AA2 2 ILE A 242 VAL A 244 -1 O LYS A 243 N GLU A 231 SHEET 1 AA3 5 ILE B 48 SER B 52 0 SHEET 2 AA3 5 ASN B 38 SER B 43 -1 N VAL B 39 O SER B 52 SHEET 3 AA3 5 GLU B 121 ARG B 130 -1 O GLY B 129 N ASN B 38 SHEET 4 AA3 5 ARG B 110 GLY B 118 -1 N PHE B 114 O LEU B 126 SHEET 5 AA3 5 GLU B 86 ILE B 89 -1 N GLU B 86 O ILE B 113 SITE 1 AC1 10 ARG A 61 MET A 65 THR A 96 VAL A 97 SITE 2 AC1 10 PHE A 98 PRO A 99 PRO A 100 HOH A 440 SITE 3 AC1 10 HOH A 462 HOH A 485 SITE 1 AC2 18 VAL A 22 ASP A 23 PHE A 24 SER A 43 SITE 2 AC2 18 ARG A 44 ARG A 45 LYS A 47 LEU A 49 SITE 3 AC2 18 GLU A 153 ILE A 154 ARG A 156 GLU A 157 SITE 4 AC2 18 LYS A 158 GLU A 161 HOH A 401 HOH A 410 SITE 5 AC2 18 HOH A 447 HOH A 449 SITE 1 AC3 10 ARG B 61 PRO B 72 TYR B 75 THR B 96 SITE 2 AC3 10 VAL B 97 PHE B 98 PRO B 100 HOH B 435 SITE 3 AC3 10 HOH B 442 HOH B 462 SITE 1 AC4 18 TYR A 181 VAL B 22 PHE B 24 SER B 43 SITE 2 AC4 18 ARG B 44 ARG B 45 LYS B 47 LEU B 49 SITE 3 AC4 18 GLU B 153 GLU B 157 LYS B 158 HOH B 415 SITE 4 AC4 18 HOH B 419 HOH B 423 HOH B 463 HOH B 472 SITE 5 AC4 18 HOH B 473 HOH B 477 CRYST1 45.824 75.992 166.301 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021823 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013159 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006013 0.00000