data_5EZU # _entry.id 5EZU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5EZU WWPDB D_1000215741 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5EZU _pdbx_database_status.recvd_initial_deposition_date 2015-11-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fedosyuk, S.' 1 'Bezerra, G.A.' 2 'Sammito, M.' 3 'Uson, I.' 4 'Skern, T.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'PLoS Pathog.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1553-7374 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first e1006079 _citation.page_last e1006079 _citation.title 'Vaccinia Virus Immunomodulator A46: A Lipid and Protein-Binding Scaffold for Sequestering Host TIR-Domain Proteins.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1006079 _citation.pdbx_database_id_PubMed 27973613 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fedosyuk, S.' 1 primary 'Bezerra, G.A.' 2 primary 'Radakovics, K.' 3 primary 'Smith, T.K.' 4 primary 'Sammito, M.' 5 primary 'Bobik, N.' 6 primary 'Round, A.' 7 primary 'Ten Eyck, L.F.' 8 primary 'Djinovic-Carugo, K.' 9 primary 'Uson, I.' 10 primary 'Skern, T.' 11 # _cell.length_a 65.787 _cell.length_b 59.580 _cell.length_c 47.257 _cell.angle_alpha 90.000 _cell.angle_beta 117.700 _cell.angle_gamma 90.000 _cell.entry_id 5EZU _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 5EZU _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein A46' 10037.169 2 ? ? ? ? 2 non-polymer syn 'MYRISTIC ACID' 228.371 1 ? ? ? ? 3 water nat water 18.015 57 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMAQQMAFDISVNASKTINALVYFSTQQNKLVIRNEVNDTHYTVEFDRDKVVDTFISYNRHNDTIEIRGVLPEETNIGC AVNTPVSMT ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMAQQMAFDISVNASKTINALVYFSTQQNKLVIRNEVNDTHYTVEFDRDKVVDTFISYNRHNDTIEIRGVLPEETNIGC AVNTPVSMT ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 ALA n 1 5 GLN n 1 6 GLN n 1 7 MET n 1 8 ALA n 1 9 PHE n 1 10 ASP n 1 11 ILE n 1 12 SER n 1 13 VAL n 1 14 ASN n 1 15 ALA n 1 16 SER n 1 17 LYS n 1 18 THR n 1 19 ILE n 1 20 ASN n 1 21 ALA n 1 22 LEU n 1 23 VAL n 1 24 TYR n 1 25 PHE n 1 26 SER n 1 27 THR n 1 28 GLN n 1 29 GLN n 1 30 ASN n 1 31 LYS n 1 32 LEU n 1 33 VAL n 1 34 ILE n 1 35 ARG n 1 36 ASN n 1 37 GLU n 1 38 VAL n 1 39 ASN n 1 40 ASP n 1 41 THR n 1 42 HIS n 1 43 TYR n 1 44 THR n 1 45 VAL n 1 46 GLU n 1 47 PHE n 1 48 ASP n 1 49 ARG n 1 50 ASP n 1 51 LYS n 1 52 VAL n 1 53 VAL n 1 54 ASP n 1 55 THR n 1 56 PHE n 1 57 ILE n 1 58 SER n 1 59 TYR n 1 60 ASN n 1 61 ARG n 1 62 HIS n 1 63 ASN n 1 64 ASP n 1 65 THR n 1 66 ILE n 1 67 GLU n 1 68 ILE n 1 69 ARG n 1 70 GLY n 1 71 VAL n 1 72 LEU n 1 73 PRO n 1 74 GLU n 1 75 GLU n 1 76 THR n 1 77 ASN n 1 78 ILE n 1 79 GLY n 1 80 CYS n 1 81 ALA n 1 82 VAL n 1 83 ASN n 1 84 THR n 1 85 PRO n 1 86 VAL n 1 87 SER n 1 88 MET n 1 89 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 89 _entity_src_gen.gene_src_common_name VACV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'VACWR172, A46R' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vaccinia virus (strain Western Reserve)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10254 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-TRX _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A46_VACCW _struct_ref.pdbx_db_accession P26672 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAFDISVNASKTINALVYFSTQQNKLVIRNEVNDTHYTVEFDRDKVVDTFISYNRHNDTIEIRGVLPEETNIGCAVNTPV SMT ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5EZU A 7 ? 89 ? P26672 1 ? 83 ? 1 83 2 1 5EZU B 7 ? 89 ? P26672 1 ? 83 ? 1 83 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5EZU GLY A 1 ? UNP P26672 ? ? 'expression tag' -5 1 1 5EZU SER A 2 ? UNP P26672 ? ? 'expression tag' -4 2 1 5EZU MET A 3 ? UNP P26672 ? ? 'expression tag' -3 3 1 5EZU ALA A 4 ? UNP P26672 ? ? 'expression tag' -2 4 1 5EZU GLN A 5 ? UNP P26672 ? ? 'expression tag' -1 5 1 5EZU GLN A 6 ? UNP P26672 ? ? 'expression tag' 0 6 2 5EZU GLY B 1 ? UNP P26672 ? ? 'expression tag' -5 7 2 5EZU SER B 2 ? UNP P26672 ? ? 'expression tag' -4 8 2 5EZU MET B 3 ? UNP P26672 ? ? 'expression tag' -3 9 2 5EZU ALA B 4 ? UNP P26672 ? ? 'expression tag' -2 10 2 5EZU GLN B 5 ? UNP P26672 ? ? 'expression tag' -1 11 2 5EZU GLN B 6 ? UNP P26672 ? ? 'expression tag' 0 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MYR non-polymer . 'MYRISTIC ACID' ? 'C14 H28 O2' 228.371 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5EZU _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG6000, sodium chloride, lithium chloride, ammonium chloride' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-07-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE MASSIF-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MASSIF-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 23.990 _reflns.entry_id 5EZU _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 41.84 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23425 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.00 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 116682 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.65 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.53 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 98.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.54 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.93 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.entry_id 5EZU _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.5500 _refine.ls_d_res_low 41.8420 _refine.pdbx_ls_sigma_F 1.370 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.4100 _refine.ls_number_reflns_obs 23389 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2017 _refine.ls_R_factor_R_work 0.1997 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2418 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.7100 _refine.ls_number_reflns_R_free 1101 _refine.ls_number_reflns_R_work 22288 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 40.9362 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2300 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 106.080 _refine.B_iso_min 17.310 _refine.pdbx_overall_phase_error 33.0400 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.5500 _refine_hist.d_res_low 41.8420 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 1223 _refine_hist.pdbx_number_residues_total 143 _refine_hist.pdbx_B_iso_mean_ligand 56.10 _refine_hist.pdbx_B_iso_mean_solvent 49.38 _refine_hist.pdbx_number_atoms_protein 1150 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1247 0.006 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1703 1.025 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 199 0.056 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 222 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 468 13.585 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_obs 1.5500 1.6205 8 98.0000 2776 . 0.3555 0.3937 . 101 . 2877 . 'X-RAY DIFFRACTION' . 1.6205 1.7060 8 99.0000 2768 . 0.3247 0.3491 . 149 . 2917 . 'X-RAY DIFFRACTION' . 1.7060 1.8129 8 99.0000 2749 . 0.2849 0.3053 . 141 . 2890 . 'X-RAY DIFFRACTION' . 1.8129 1.9528 8 99.0000 2759 . 0.2276 0.2828 . 143 . 2902 . 'X-RAY DIFFRACTION' . 1.9528 2.1494 8 100.0000 2797 . 0.2003 0.2436 . 132 . 2929 . 'X-RAY DIFFRACTION' . 2.1494 2.4604 8 100.0000 2765 . 0.1925 0.2409 . 166 . 2931 . 'X-RAY DIFFRACTION' . 2.4604 3.0996 8 100.0000 2797 . 0.2162 0.2525 . 151 . 2948 . 'X-RAY DIFFRACTION' . 3.0996 41.8570 8 100.0000 2877 . 0.1656 0.2070 . 118 . 2995 . 'X-RAY DIFFRACTION' . # _struct.entry_id 5EZU _struct.title 'Crystal structure of the N-terminal domain of vaccinia virus immunomodulator A46 in complex with myristic acid.' _struct.pdbx_descriptor 'Protein A46' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5EZU _struct_keywords.text 'immunomodulator, beta sheet, ab initio phasing, vaccinia virus, A46, viral protein, fatty acids, myristic acid' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 8 ? ASN A 14 ? ALA A 2 ASN A 8 AA1 2 THR A 65 ? VAL A 71 ? THR A 59 VAL A 65 AA1 3 VAL A 53 ? ASN A 60 ? VAL A 47 ASN A 54 AA1 4 ILE B 19 ? SER B 26 ? ILE B 13 SER B 20 AA1 5 LYS B 31 ? VAL B 38 ? LYS B 25 VAL B 32 AA1 6 THR B 41 ? ASP B 48 ? THR B 35 ASP B 42 AA2 1 ASN A 77 ? ALA A 81 ? ASN A 71 ALA A 75 AA2 2 THR A 41 ? PHE A 47 ? THR A 35 PHE A 41 AA2 3 LYS A 31 ? VAL A 38 ? LYS A 25 VAL A 32 AA2 4 ILE A 19 ? SER A 26 ? ILE A 13 SER A 20 AA2 5 VAL B 53 ? ASN B 60 ? VAL B 47 ASN B 54 AA2 6 THR B 65 ? VAL B 71 ? THR B 59 VAL B 65 AA2 7 ALA B 8 ? ASN B 14 ? ALA B 2 ASN B 8 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 11 ? N ILE A 5 O ILE A 68 ? O ILE A 62 AA1 2 3 O THR A 65 ? O THR A 59 N ASN A 60 ? N ASN A 54 AA1 3 4 N THR A 55 ? N THR A 49 O ALA B 21 ? O ALA B 15 AA1 4 5 N TYR B 24 ? N TYR B 18 O VAL B 33 ? O VAL B 27 AA1 5 6 N ASN B 36 ? N ASN B 30 O TYR B 43 ? O TYR B 37 AA2 1 2 O ALA A 81 ? O ALA A 75 N HIS A 42 ? N HIS A 36 AA2 2 3 O PHE A 47 ? O PHE A 41 N LEU A 32 ? N LEU A 26 AA2 3 4 O ARG A 35 ? O ARG A 29 N LEU A 22 ? N LEU A 16 AA2 4 5 N ALA A 21 ? N ALA A 15 O THR B 55 ? O THR B 49 AA2 5 6 N ASP B 54 ? N ASP B 48 O VAL B 71 ? O VAL B 65 AA2 6 7 O GLY B 70 ? O GLY B 64 N PHE B 9 ? N PHE B 3 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MYR _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'binding site for residue MYR A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 MET A 7 ? MET A 1 . ? 2_557 ? 2 AC1 5 PHE A 9 ? PHE A 3 . ? 1_555 ? 3 AC1 5 ASN A 36 ? ASN A 30 . ? 1_555 ? 4 AC1 5 HOH D . ? HOH A 206 . ? 1_555 ? 5 AC1 5 THR B 55 ? THR B 49 . ? 1_555 ? # _atom_sites.entry_id 5EZU _atom_sites.fract_transf_matrix[1][1] 0.015201 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007980 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016784 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023900 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -5 ? ? ? A . n A 1 2 SER 2 -4 ? ? ? A . n A 1 3 MET 3 -3 ? ? ? A . n A 1 4 ALA 4 -2 ? ? ? A . n A 1 5 GLN 5 -1 ? ? ? A . n A 1 6 GLN 6 0 ? ? ? A . n A 1 7 MET 7 1 1 MET MET A . n A 1 8 ALA 8 2 2 ALA ALA A . n A 1 9 PHE 9 3 3 PHE PHE A . n A 1 10 ASP 10 4 4 ASP ASP A . n A 1 11 ILE 11 5 5 ILE ILE A . n A 1 12 SER 12 6 6 SER SER A . n A 1 13 VAL 13 7 7 VAL VAL A . n A 1 14 ASN 14 8 8 ASN ASN A . n A 1 15 ALA 15 9 9 ALA ALA A . n A 1 16 SER 16 10 10 SER SER A . n A 1 17 LYS 17 11 11 LYS LYS A . n A 1 18 THR 18 12 12 THR THR A . n A 1 19 ILE 19 13 13 ILE ILE A . n A 1 20 ASN 20 14 14 ASN ASN A . n A 1 21 ALA 21 15 15 ALA ALA A . n A 1 22 LEU 22 16 16 LEU LEU A . n A 1 23 VAL 23 17 17 VAL VAL A . n A 1 24 TYR 24 18 18 TYR TYR A . n A 1 25 PHE 25 19 19 PHE PHE A . n A 1 26 SER 26 20 20 SER SER A . n A 1 27 THR 27 21 21 THR THR A . n A 1 28 GLN 28 22 22 GLN GLN A . n A 1 29 GLN 29 23 23 GLN GLN A . n A 1 30 ASN 30 24 24 ASN ASN A . n A 1 31 LYS 31 25 25 LYS LYS A . n A 1 32 LEU 32 26 26 LEU LEU A . n A 1 33 VAL 33 27 27 VAL VAL A . n A 1 34 ILE 34 28 28 ILE ILE A . n A 1 35 ARG 35 29 29 ARG ARG A . n A 1 36 ASN 36 30 30 ASN ASN A . n A 1 37 GLU 37 31 31 GLU GLU A . n A 1 38 VAL 38 32 32 VAL VAL A . n A 1 39 ASN 39 33 33 ASN ASN A . n A 1 40 ASP 40 34 34 ASP ASP A . n A 1 41 THR 41 35 35 THR THR A . n A 1 42 HIS 42 36 36 HIS HIS A . n A 1 43 TYR 43 37 37 TYR TYR A . n A 1 44 THR 44 38 38 THR THR A . n A 1 45 VAL 45 39 39 VAL VAL A . n A 1 46 GLU 46 40 40 GLU GLU A . n A 1 47 PHE 47 41 41 PHE PHE A . n A 1 48 ASP 48 42 42 ASP ASP A . n A 1 49 ARG 49 43 43 ARG ARG A . n A 1 50 ASP 50 44 44 ASP ASP A . n A 1 51 LYS 51 45 45 LYS LYS A . n A 1 52 VAL 52 46 46 VAL VAL A . n A 1 53 VAL 53 47 47 VAL VAL A . n A 1 54 ASP 54 48 48 ASP ASP A . n A 1 55 THR 55 49 49 THR THR A . n A 1 56 PHE 56 50 50 PHE PHE A . n A 1 57 ILE 57 51 51 ILE ILE A . n A 1 58 SER 58 52 52 SER SER A . n A 1 59 TYR 59 53 53 TYR TYR A . n A 1 60 ASN 60 54 54 ASN ASN A . n A 1 61 ARG 61 55 55 ARG ARG A . n A 1 62 HIS 62 56 56 HIS HIS A . n A 1 63 ASN 63 57 57 ASN ASN A . n A 1 64 ASP 64 58 58 ASP ASP A . n A 1 65 THR 65 59 59 THR THR A . n A 1 66 ILE 66 60 60 ILE ILE A . n A 1 67 GLU 67 61 61 GLU GLU A . n A 1 68 ILE 68 62 62 ILE ILE A . n A 1 69 ARG 69 63 63 ARG ARG A . n A 1 70 GLY 70 64 64 GLY GLY A . n A 1 71 VAL 71 65 65 VAL VAL A . n A 1 72 LEU 72 66 66 LEU LEU A . n A 1 73 PRO 73 67 67 PRO PRO A . n A 1 74 GLU 74 68 68 GLU GLU A . n A 1 75 GLU 75 69 69 GLU GLU A . n A 1 76 THR 76 70 70 THR THR A . n A 1 77 ASN 77 71 71 ASN ASN A . n A 1 78 ILE 78 72 72 ILE ILE A . n A 1 79 GLY 79 73 73 GLY GLY A . n A 1 80 CYS 80 74 74 CYS CYS A . n A 1 81 ALA 81 75 75 ALA ALA A . n A 1 82 VAL 82 76 76 VAL VAL A . n A 1 83 ASN 83 77 ? ? ? A . n A 1 84 THR 84 78 ? ? ? A . n A 1 85 PRO 85 79 ? ? ? A . n A 1 86 VAL 86 80 ? ? ? A . n A 1 87 SER 87 81 ? ? ? A . n A 1 88 MET 88 82 ? ? ? A . n A 1 89 THR 89 83 ? ? ? A . n B 1 1 GLY 1 -5 ? ? ? B . n B 1 2 SER 2 -4 ? ? ? B . n B 1 3 MET 3 -3 ? ? ? B . n B 1 4 ALA 4 -2 ? ? ? B . n B 1 5 GLN 5 -1 ? ? ? B . n B 1 6 GLN 6 0 ? ? ? B . n B 1 7 MET 7 1 1 MET MET B . n B 1 8 ALA 8 2 2 ALA ALA B . n B 1 9 PHE 9 3 3 PHE PHE B . n B 1 10 ASP 10 4 4 ASP ASP B . n B 1 11 ILE 11 5 5 ILE ILE B . n B 1 12 SER 12 6 6 SER SER B . n B 1 13 VAL 13 7 7 VAL VAL B . n B 1 14 ASN 14 8 8 ASN ASN B . n B 1 15 ALA 15 9 9 ALA ALA B . n B 1 16 SER 16 10 10 SER SER B . n B 1 17 LYS 17 11 11 LYS LYS B . n B 1 18 THR 18 12 12 THR THR B . n B 1 19 ILE 19 13 13 ILE ILE B . n B 1 20 ASN 20 14 14 ASN ASN B . n B 1 21 ALA 21 15 15 ALA ALA B . n B 1 22 LEU 22 16 16 LEU LEU B . n B 1 23 VAL 23 17 17 VAL VAL B . n B 1 24 TYR 24 18 18 TYR TYR B . n B 1 25 PHE 25 19 19 PHE PHE B . n B 1 26 SER 26 20 20 SER SER B . n B 1 27 THR 27 21 21 THR THR B . n B 1 28 GLN 28 22 22 GLN GLN B . n B 1 29 GLN 29 23 23 GLN GLN B . n B 1 30 ASN 30 24 24 ASN ASN B . n B 1 31 LYS 31 25 25 LYS LYS B . n B 1 32 LEU 32 26 26 LEU LEU B . n B 1 33 VAL 33 27 27 VAL VAL B . n B 1 34 ILE 34 28 28 ILE ILE B . n B 1 35 ARG 35 29 29 ARG ARG B . n B 1 36 ASN 36 30 30 ASN ASN B . n B 1 37 GLU 37 31 31 GLU GLU B . n B 1 38 VAL 38 32 32 VAL VAL B . n B 1 39 ASN 39 33 33 ASN ASN B . n B 1 40 ASP 40 34 34 ASP ASP B . n B 1 41 THR 41 35 35 THR THR B . n B 1 42 HIS 42 36 36 HIS HIS B . n B 1 43 TYR 43 37 37 TYR TYR B . n B 1 44 THR 44 38 38 THR THR B . n B 1 45 VAL 45 39 39 VAL VAL B . n B 1 46 GLU 46 40 40 GLU GLU B . n B 1 47 PHE 47 41 41 PHE PHE B . n B 1 48 ASP 48 42 42 ASP ASP B . n B 1 49 ARG 49 43 43 ARG ARG B . n B 1 50 ASP 50 44 44 ASP ASP B . n B 1 51 LYS 51 45 45 LYS LYS B . n B 1 52 VAL 52 46 46 VAL VAL B . n B 1 53 VAL 53 47 47 VAL VAL B . n B 1 54 ASP 54 48 48 ASP ASP B . n B 1 55 THR 55 49 49 THR THR B . n B 1 56 PHE 56 50 50 PHE PHE B . n B 1 57 ILE 57 51 51 ILE ILE B . n B 1 58 SER 58 52 52 SER SER B . n B 1 59 TYR 59 53 53 TYR TYR B . n B 1 60 ASN 60 54 54 ASN ASN B . n B 1 61 ARG 61 55 55 ARG ARG B . n B 1 62 HIS 62 56 56 HIS HIS B . n B 1 63 ASN 63 57 57 ASN ASN B . n B 1 64 ASP 64 58 58 ASP ASP B . n B 1 65 THR 65 59 59 THR THR B . n B 1 66 ILE 66 60 60 ILE ILE B . n B 1 67 GLU 67 61 61 GLU GLU B . n B 1 68 ILE 68 62 62 ILE ILE B . n B 1 69 ARG 69 63 63 ARG ARG B . n B 1 70 GLY 70 64 64 GLY GLY B . n B 1 71 VAL 71 65 65 VAL VAL B . n B 1 72 LEU 72 66 66 LEU LEU B . n B 1 73 PRO 73 67 67 PRO PRO B . n B 1 74 GLU 74 68 ? ? ? B . n B 1 75 GLU 75 69 ? ? ? B . n B 1 76 THR 76 70 ? ? ? B . n B 1 77 ASN 77 71 ? ? ? B . n B 1 78 ILE 78 72 ? ? ? B . n B 1 79 GLY 79 73 ? ? ? B . n B 1 80 CYS 80 74 ? ? ? B . n B 1 81 ALA 81 75 ? ? ? B . n B 1 82 VAL 82 76 ? ? ? B . n B 1 83 ASN 83 77 ? ? ? B . n B 1 84 THR 84 78 ? ? ? B . n B 1 85 PRO 85 79 ? ? ? B . n B 1 86 VAL 86 80 ? ? ? B . n B 1 87 SER 87 81 ? ? ? B . n B 1 88 MET 88 82 ? ? ? B . n B 1 89 THR 89 83 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR 1 101 1 MYR MYR A . D 3 HOH 1 201 42 HOH HOH A . D 3 HOH 2 202 24 HOH HOH A . D 3 HOH 3 203 41 HOH HOH A . D 3 HOH 4 204 33 HOH HOH A . D 3 HOH 5 205 34 HOH HOH A . D 3 HOH 6 206 40 HOH HOH A . D 3 HOH 7 207 12 HOH HOH A . D 3 HOH 8 208 14 HOH HOH A . D 3 HOH 9 209 38 HOH HOH A . D 3 HOH 10 210 2 HOH HOH A . D 3 HOH 11 211 35 HOH HOH A . D 3 HOH 12 212 17 HOH HOH A . D 3 HOH 13 213 5 HOH HOH A . D 3 HOH 14 214 56 HOH HOH A . D 3 HOH 15 215 11 HOH HOH A . D 3 HOH 16 216 6 HOH HOH A . D 3 HOH 17 217 7 HOH HOH A . D 3 HOH 18 218 15 HOH HOH A . D 3 HOH 19 219 3 HOH HOH A . D 3 HOH 20 220 47 HOH HOH A . D 3 HOH 21 221 48 HOH HOH A . D 3 HOH 22 222 52 HOH HOH A . D 3 HOH 23 223 29 HOH HOH A . D 3 HOH 24 224 27 HOH HOH A . D 3 HOH 25 225 8 HOH HOH A . D 3 HOH 26 226 25 HOH HOH A . D 3 HOH 27 227 54 HOH HOH A . D 3 HOH 28 228 16 HOH HOH A . D 3 HOH 29 229 32 HOH HOH A . D 3 HOH 30 230 21 HOH HOH A . D 3 HOH 31 231 18 HOH HOH A . D 3 HOH 32 232 37 HOH HOH A . D 3 HOH 33 233 39 HOH HOH A . D 3 HOH 34 234 51 HOH HOH A . D 3 HOH 35 235 30 HOH HOH A . D 3 HOH 36 236 53 HOH HOH A . D 3 HOH 37 237 22 HOH HOH A . D 3 HOH 38 238 19 HOH HOH A . D 3 HOH 39 239 31 HOH HOH A . E 3 HOH 1 101 36 HOH HOH B . E 3 HOH 2 102 45 HOH HOH B . E 3 HOH 3 103 46 HOH HOH B . E 3 HOH 4 104 44 HOH HOH B . E 3 HOH 5 105 9 HOH HOH B . E 3 HOH 6 106 43 HOH HOH B . E 3 HOH 7 107 1 HOH HOH B . E 3 HOH 8 108 10 HOH HOH B . E 3 HOH 9 109 4 HOH HOH B . E 3 HOH 10 110 57 HOH HOH B . E 3 HOH 11 111 28 HOH HOH B . E 3 HOH 12 112 20 HOH HOH B . E 3 HOH 13 113 13 HOH HOH B . E 3 HOH 14 114 23 HOH HOH B . E 3 HOH 15 115 55 HOH HOH B . E 3 HOH 16 116 26 HOH HOH B . E 3 HOH 17 117 49 HOH HOH B . E 3 HOH 18 118 50 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8610 ? 1 MORE -15 ? 1 'SSA (A^2)' 12900 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_658 -x+1,y,-z+3 -1.0000000000 0.0000000000 0.0000000000 -0.1141216644 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 125.5231397168 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 230 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-11-30 2 'Structure model' 1 1 2016-12-28 3 'Structure model' 1 2 2017-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 3 'Structure model' software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_audit_support.funding_organization' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -7.7194 -10.8464 42.4799 0.3336 0.3653 0.2301 0.0729 -0.0407 0.0001 2.0770 4.7131 5.0087 -0.3659 -3.0251 1.1514 0.2726 -0.0861 -0.2266 0.7413 0.1057 0.2089 -0.7259 -0.0799 -0.4466 'X-RAY DIFFRACTION' 2 ? refined -12.9865 4.2686 50.2152 0.2904 0.2586 0.3606 0.1307 -0.1011 -0.0736 7.3811 5.1176 6.1498 -2.2457 -3.0046 1.2246 -0.4063 0.3714 0.0448 -0.2031 1.2151 -0.1433 0.1751 -0.3505 -0.3019 'X-RAY DIFFRACTION' 3 ? refined -15.8255 -0.8500 48.3491 0.2443 0.3389 0.2850 0.0718 -0.0358 -0.0508 4.7775 4.6346 9.4883 0.0540 -0.8895 -1.7073 -0.0396 0.0226 0.2459 0.2890 0.2715 0.1413 0.0514 -0.3237 -0.8270 'X-RAY DIFFRACTION' 4 ? refined -11.7634 -12.0438 45.8230 0.2219 0.3628 0.2150 0.0053 0.0228 -0.0514 2.9773 4.7886 1.3758 -2.6660 0.0803 0.9291 -0.0576 -0.0494 0.1367 0.0268 -0.1618 0.3430 -0.0182 0.1281 -0.4850 'X-RAY DIFFRACTION' 5 ? refined 2.3567 -7.3108 57.1114 0.4077 0.2335 0.2508 0.0214 -0.0966 -0.0058 6.2172 4.3505 8.0003 -0.7739 0.3831 5.7373 -0.1685 -0.4111 0.1883 0.0464 0.4482 -0.1129 0.2540 -0.6931 0.1888 'X-RAY DIFFRACTION' 6 ? refined -10.9229 -6.6017 60.1362 0.3150 0.5057 0.2382 0.1711 0.0417 -0.1494 3.3675 7.0259 2.6286 -2.3906 -0.9348 2.3581 -0.4437 0.3446 0.1927 -1.0044 0.0644 0.4553 0.7520 0.0312 -0.4464 'X-RAY DIFFRACTION' 7 ? refined -8.6073 -6.0256 61.4989 0.3372 0.2954 0.1836 0.0627 -0.0716 -0.0567 8.0924 4.8479 3.6460 -6.4572 -3.4683 3.5789 -0.1758 -0.1754 0.2122 -0.1882 0.3124 -0.1965 1.0687 -0.1833 -0.7357 'X-RAY DIFFRACTION' 8 ? refined -4.8199 -7.1797 63.6723 0.3503 0.2273 0.2342 -0.0006 -0.0768 -0.0014 6.7487 2.3489 5.9534 -3.7107 1.0513 -1.3558 0.2152 -0.4102 0.2508 -0.0998 -0.1150 0.4087 -0.1597 0.0728 -0.1024 'X-RAY DIFFRACTION' 9 ? refined -8.6727 8.1039 57.7078 0.7441 0.3101 0.8224 0.1313 -0.1389 -0.1143 3.4644 4.7039 4.4345 -2.6158 -0.3396 3.1545 -0.3753 0.3905 -0.1779 -0.2069 1.6288 0.6200 1.2486 -0.9291 -0.2376 'X-RAY DIFFRACTION' 10 ? refined 4.0413 -11.6810 47.8113 0.1759 0.2741 0.2916 0.0321 0.0509 0.0092 5.5949 6.4207 2.7656 -3.0049 1.0909 -0.0990 0.2206 -0.3838 0.1408 0.4754 0.1899 -0.8143 -0.3164 -0.0301 0.4627 'X-RAY DIFFRACTION' 11 ? refined 1.8061 -4.1540 52.5798 0.2891 0.2623 0.3567 0.0096 -0.1002 -0.0034 6.5947 4.8342 4.8110 -4.9134 -2.7617 4.4480 -0.1685 0.1686 0.0691 0.1620 1.0262 -1.3771 0.5892 -0.3065 0.3265 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 13 ;chain 'A' and (resid 1 through 13 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 14 A 32 ;chain 'A' and (resid 14 through 32 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 33 A 47 ;chain 'A' and (resid 33 through 47 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 48 A 76 ;chain 'A' and (resid 48 through 76 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 1 B 8 ;chain 'B' and (resid 1 through 8 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 9 B 24 ;chain 'B' and (resid 9 through 24 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 25 B 32 ;chain 'B' and (resid 25 through 32 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 33 B 42 ;chain 'B' and (resid 33 through 42 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 43 B 47 ;chain 'B' and (resid 43 through 47 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 B 48 B 58 ;chain 'B' and (resid 48 through 58 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 B 59 B 67 ;chain 'B' and (resid 59 through 67 ) ; ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? dev_1938 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XPREP ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Arcimboldo ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 236 ? ? O A HOH 238 ? ? 2.02 2 1 O B PRO 67 ? ? O B HOH 101 ? ? 2.09 3 1 N A MET 1 ? ? O A HOH 201 ? ? 2.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 33 ? ? 57.04 -121.14 2 1 ASN B 33 ? ? 50.70 -122.41 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 4 ? CG ? A ASP 10 CG 2 1 Y 1 A ASP 4 ? OD1 ? A ASP 10 OD1 3 1 Y 1 A ASP 4 ? OD2 ? A ASP 10 OD2 4 1 Y 1 A ASP 34 ? CG ? A ASP 40 CG 5 1 Y 1 A ASP 34 ? OD1 ? A ASP 40 OD1 6 1 Y 1 A ASP 34 ? OD2 ? A ASP 40 OD2 7 1 Y 1 A GLU 69 ? CD ? A GLU 75 CD 8 1 Y 1 A GLU 69 ? OE1 ? A GLU 75 OE1 9 1 Y 1 A GLU 69 ? OE2 ? A GLU 75 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -5 ? A GLY 1 2 1 Y 1 A SER -4 ? A SER 2 3 1 Y 1 A MET -3 ? A MET 3 4 1 Y 1 A ALA -2 ? A ALA 4 5 1 Y 1 A GLN -1 ? A GLN 5 6 1 Y 1 A GLN 0 ? A GLN 6 7 1 Y 1 A ASN 77 ? A ASN 83 8 1 Y 1 A THR 78 ? A THR 84 9 1 Y 1 A PRO 79 ? A PRO 85 10 1 Y 1 A VAL 80 ? A VAL 86 11 1 Y 1 A SER 81 ? A SER 87 12 1 Y 1 A MET 82 ? A MET 88 13 1 Y 1 A THR 83 ? A THR 89 14 1 Y 1 B GLY -5 ? B GLY 1 15 1 Y 1 B SER -4 ? B SER 2 16 1 Y 1 B MET -3 ? B MET 3 17 1 Y 1 B ALA -2 ? B ALA 4 18 1 Y 1 B GLN -1 ? B GLN 5 19 1 Y 1 B GLN 0 ? B GLN 6 20 1 Y 1 B GLU 68 ? B GLU 74 21 1 Y 1 B GLU 69 ? B GLU 75 22 1 Y 1 B THR 70 ? B THR 76 23 1 Y 1 B ASN 71 ? B ASN 77 24 1 Y 1 B ILE 72 ? B ILE 78 25 1 Y 1 B GLY 73 ? B GLY 79 26 1 Y 1 B CYS 74 ? B CYS 80 27 1 Y 1 B ALA 75 ? B ALA 81 28 1 Y 1 B VAL 76 ? B VAL 82 29 1 Y 1 B ASN 77 ? B ASN 83 30 1 Y 1 B THR 78 ? B THR 84 31 1 Y 1 B PRO 79 ? B PRO 85 32 1 Y 1 B VAL 80 ? B VAL 86 33 1 Y 1 B SER 81 ? B SER 87 34 1 Y 1 B MET 82 ? B MET 88 35 1 Y 1 B THR 83 ? B THR 89 # _pdbx_audit_support.funding_organization 'Austrian Science Fund' _pdbx_audit_support.country Austria _pdbx_audit_support.grant_number W1221 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MYRISTIC ACID' MYR 3 water HOH #