HEADER PROTEIN TRANSPORT 27-NOV-15 5F0K TITLE STRUCTURE OF VPS35 N TERMINAL REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: RESIDUES 14-470; COMPND 5 SYNONYM: HVPS35,MATERNAL-EMBRYONIC 3,VESICLE PROTEIN SORTING 35; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: VPS35, MEM3, TCCCTA00141; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGST-PARALLEL2 KEYWDS PROTEIN TRANSPORT, RETROMER, SORTING NEXIN EXPDTA X-RAY DIFFRACTION AUTHOR M.LUCAS,D.GERSHLICK,A.VIDAURRAZAGA,A.L.ROJAS,J.S.BONIFACINO,A.HIERRO REVDAT 3 08-MAY-24 5F0K 1 REMARK REVDAT 2 14-DEC-16 5F0K 1 JRNL REVDAT 1 07-DEC-16 5F0K 0 JRNL AUTH M.LUCAS,D.C.GERSHLICK,A.VIDAURRAZAGA,A.L.ROJAS, JRNL AUTH 2 J.S.BONIFACINO,A.HIERRO JRNL TITL STRUCTURAL MECHANISM FOR CARGO RECOGNITION BY THE RETROMER JRNL TITL 2 COMPLEX. JRNL REF CELL V. 167 1623 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27889239 JRNL DOI 10.1016/J.CELL.2016.10.056 REMARK 2 REMARK 2 RESOLUTION. 3.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 54552 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9201 - 8.1898 1.00 2811 158 0.1945 0.2094 REMARK 3 2 8.1898 - 6.5057 1.00 2789 154 0.2380 0.2756 REMARK 3 3 6.5057 - 5.6848 1.00 2754 132 0.2440 0.2449 REMARK 3 4 5.6848 - 5.1657 1.00 2749 140 0.2015 0.2242 REMARK 3 5 5.1657 - 4.7958 1.00 2766 151 0.1742 0.2148 REMARK 3 6 4.7958 - 4.5133 1.00 2736 141 0.1696 0.2440 REMARK 3 7 4.5133 - 4.2874 1.00 2760 139 0.1665 0.2313 REMARK 3 8 4.2874 - 4.1009 1.00 2712 138 0.1733 0.2112 REMARK 3 9 4.1009 - 3.9431 1.00 2753 152 0.1817 0.2475 REMARK 3 10 3.9431 - 3.8071 1.00 2686 166 0.1892 0.2279 REMARK 3 11 3.8071 - 3.6881 1.00 2741 125 0.2140 0.3043 REMARK 3 12 3.6881 - 3.5827 1.00 2753 131 0.2397 0.2966 REMARK 3 13 3.5827 - 3.4884 1.00 2708 160 0.2179 0.2879 REMARK 3 14 3.4884 - 3.4033 1.00 2736 160 0.2052 0.2941 REMARK 3 15 3.4033 - 3.3260 1.00 2682 169 0.2151 0.3017 REMARK 3 16 3.3260 - 3.2552 1.00 2756 111 0.2250 0.3058 REMARK 3 17 3.2552 - 3.1901 1.00 2753 119 0.2335 0.3275 REMARK 3 18 3.1901 - 3.1299 1.00 2698 140 0.2642 0.3167 REMARK 3 19 3.1299 - 3.0740 0.92 2485 138 0.2921 0.3539 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 17824 REMARK 3 ANGLE : 0.625 24011 REMARK 3 CHIRALITY : 0.037 2805 REMARK 3 PLANARITY : 0.003 3038 REMARK 3 DIHEDRAL : 14.276 10985 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F0K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215801. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979030 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62588 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.65600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M AMSO4, 2% PEG 1000, 0.1 M HEPES REMARK 280 PH 7.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 100.35000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 100.35000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 54.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 9 REMARK 465 ALA A 10 REMARK 465 MET A 11 REMARK 465 GLN A 200 REMARK 465 GLY A 201 REMARK 465 HIS A 202 REMARK 465 SER A 203 REMARK 465 ARG A 204 REMARK 465 ASP A 205 REMARK 465 ARG A 206 REMARK 465 GLU A 207 REMARK 465 ASN A 384 REMARK 465 LEU A 385 REMARK 465 GLU A 386 REMARK 465 HIS A 387 REMARK 465 ILE A 388 REMARK 465 ALA A 389 REMARK 465 THR A 390 REMARK 465 LEU A 445 REMARK 465 ASP A 446 REMARK 465 TYR A 447 REMARK 465 ASN A 448 REMARK 465 THR A 449 REMARK 465 GLU A 450 REMARK 465 ILE A 451 REMARK 465 VAL A 452 REMARK 465 SER A 453 REMARK 465 GLN A 454 REMARK 465 ASP A 470 REMARK 465 GLY B 9 REMARK 465 ALA B 10 REMARK 465 HIS B 202 REMARK 465 SER B 203 REMARK 465 ARG B 204 REMARK 465 ALA B 310 REMARK 465 HIS B 311 REMARK 465 ARG B 312 REMARK 465 GLU B 313 REMARK 465 ASP B 314 REMARK 465 GLY B 315 REMARK 465 PRO B 316 REMARK 465 GLY B 317 REMARK 465 LEU B 385 REMARK 465 GLU B 386 REMARK 465 HIS B 387 REMARK 465 ILE B 388 REMARK 465 ALA B 389 REMARK 465 LEU B 445 REMARK 465 ASP B 446 REMARK 465 TYR B 447 REMARK 465 ASN B 448 REMARK 465 THR B 449 REMARK 465 GLU B 450 REMARK 465 ILE B 451 REMARK 465 VAL B 452 REMARK 465 SER B 453 REMARK 465 GLN B 454 REMARK 465 ASP B 455 REMARK 465 GLN B 456 REMARK 465 GLN B 469 REMARK 465 ASP B 470 REMARK 465 GLN C 198 REMARK 465 HIS C 199 REMARK 465 GLN C 200 REMARK 465 GLY C 201 REMARK 465 HIS C 202 REMARK 465 ALA C 389 REMARK 465 THR C 390 REMARK 465 SER C 391 REMARK 465 TYR C 427 REMARK 465 PHE C 428 REMARK 465 ASP C 429 REMARK 465 TYR C 430 REMARK 465 LEU C 445 REMARK 465 ASP C 446 REMARK 465 TYR C 447 REMARK 465 ASN C 448 REMARK 465 THR C 449 REMARK 465 GLU C 450 REMARK 465 ILE C 451 REMARK 465 VAL C 452 REMARK 465 SER C 453 REMARK 465 GLN C 454 REMARK 465 ASP C 470 REMARK 465 GLY D 9 REMARK 465 ALA D 10 REMARK 465 GLN D 200 REMARK 465 GLY D 201 REMARK 465 HIS D 202 REMARK 465 SER D 203 REMARK 465 ARG D 204 REMARK 465 ASP D 205 REMARK 465 ARG D 206 REMARK 465 GLU D 386 REMARK 465 HIS D 387 REMARK 465 ILE D 388 REMARK 465 ALA D 389 REMARK 465 THR D 390 REMARK 465 SER D 391 REMARK 465 THR D 408 REMARK 465 TYR D 409 REMARK 465 ASN D 410 REMARK 465 ASP D 446 REMARK 465 TYR D 447 REMARK 465 ASN D 448 REMARK 465 THR D 449 REMARK 465 GLU D 450 REMARK 465 ILE D 451 REMARK 465 VAL D 452 REMARK 465 SER D 453 REMARK 465 GLN D 454 REMARK 465 GLN D 469 REMARK 465 ASP D 470 REMARK 465 GLY E 9 REMARK 465 ALA E 10 REMARK 465 MET E 11 REMARK 465 PRO E 316 REMARK 465 GLY E 317 REMARK 465 ILE E 318 REMARK 465 PRO E 319 REMARK 465 ALA E 320 REMARK 465 PRO E 363 REMARK 465 ASP E 364 REMARK 465 ARG E 365 REMARK 465 LYS E 382 REMARK 465 LEU E 383 REMARK 465 ASN E 384 REMARK 465 LEU E 385 REMARK 465 GLU E 386 REMARK 465 HIS E 387 REMARK 465 ILE E 388 REMARK 465 ALA E 389 REMARK 465 THR E 390 REMARK 465 THR E 408 REMARK 465 TYR E 409 REMARK 465 ASN E 410 REMARK 465 ASN E 411 REMARK 465 PHE E 428 REMARK 465 ASP E 429 REMARK 465 TYR E 430 REMARK 465 GLU E 431 REMARK 465 SER E 432 REMARK 465 ARG E 433 REMARK 465 ASP E 446 REMARK 465 TYR E 447 REMARK 465 ASN E 448 REMARK 465 THR E 449 REMARK 465 GLU E 450 REMARK 465 ILE E 451 REMARK 465 VAL E 452 REMARK 465 SER E 453 REMARK 465 ASP E 470 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU E 463 HG1 THR E 466 1.47 REMARK 500 O LYS E 434 HG SER E 437 1.48 REMARK 500 HH22 ARG A 213 OD2 ASP A 255 1.48 REMARK 500 O ASP C 364 H VAL C 366 1.48 REMARK 500 HH21 ARG D 226 OE1 GLN D 229 1.50 REMARK 500 O ARG C 433 HG SER C 437 1.52 REMARK 500 O SER C 395 HG1 THR C 399 1.52 REMARK 500 O PRO E 162 HG SER E 179 1.53 REMARK 500 HH12 ARG B 126 OE1 GLU B 166 1.55 REMARK 500 O VAL C 183 H PHE C 187 1.56 REMARK 500 HH12 ARG C 126 OE2 GLU C 166 1.57 REMARK 500 O ILE B 404 HG1 THR B 408 1.57 REMARK 500 O VAL B 23 HG SER B 27 1.58 REMARK 500 O SER D 395 HG1 THR D 399 1.58 REMARK 500 O PRO A 405 H TYR A 409 1.59 REMARK 500 NE2 GLN A 21 OD1 ASP D 72 2.08 REMARK 500 O GLN B 141 NH2 ARG B 196 2.10 REMARK 500 O LYS E 434 OG SER E 437 2.13 REMARK 500 O ASN A 411 OG1 THR A 414 2.17 REMARK 500 O PRO C 363 OH TYR C 409 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 38 77.75 -110.31 REMARK 500 ALA A 86 -108.80 59.50 REMARK 500 GLU A 170 -169.65 -67.69 REMARK 500 GLU A 171 -3.28 73.26 REMARK 500 THR B 168 -155.32 -72.63 REMARK 500 GLU B 170 73.71 -102.78 REMARK 500 ILE B 241 -57.16 -124.39 REMARK 500 HIS B 290 157.09 -48.43 REMARK 500 ILE B 336 -73.27 -61.98 REMARK 500 LYS B 382 -22.18 -145.79 REMARK 500 ASN B 410 -79.16 -83.29 REMARK 500 THR B 414 83.40 -52.19 REMARK 500 PHE B 428 172.99 -58.16 REMARK 500 LYS C 38 70.55 -108.37 REMARK 500 ALA C 101 -91.81 -89.83 REMARK 500 ASN C 103 -164.31 -76.41 REMARK 500 GLU C 171 5.71 -67.26 REMARK 500 ASP C 341 39.09 -141.82 REMARK 500 TYR C 362 76.85 -118.78 REMARK 500 ARG C 365 68.20 -65.51 REMARK 500 ASN C 384 -6.88 69.55 REMARK 500 GLU C 386 11.36 57.54 REMARK 500 TYR C 409 51.82 -115.84 REMARK 500 SER D 13 37.34 -92.86 REMARK 500 SER D 338 22.22 -75.23 REMARK 500 ARG D 365 74.90 -69.93 REMARK 500 VAL D 406 68.14 -102.46 REMARK 500 LEU D 413 60.05 32.24 REMARK 500 TYR D 427 40.38 -83.80 REMARK 500 LYS E 38 73.01 -108.79 REMARK 500 LYS E 87 22.84 91.28 REMARK 500 LYS E 90 -18.02 87.55 REMARK 500 ASP E 163 -157.57 -127.57 REMARK 500 ARG E 204 -0.35 64.13 REMARK 500 VAL E 233 94.66 -64.79 REMARK 500 ASN E 234 -161.38 -111.09 REMARK 500 ILE E 241 -51.26 -120.53 REMARK 500 VAL E 242 -72.17 -60.31 REMARK 500 THR E 278 27.91 -145.20 REMARK 500 PHE E 425 47.71 -77.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 C 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO E 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO E 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL E 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 E 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2R17 RELATED DB: PDB REMARK 900 RELATED ID: 2FAU RELATED DB: PDB REMARK 900 RELATED ID: 5F0J RELATED DB: PDB DBREF 5F0K A 14 470 UNP Q96QK1 VPS35_HUMAN 14 470 DBREF 5F0K B 14 470 UNP Q96QK1 VPS35_HUMAN 14 470 DBREF 5F0K C 14 470 UNP Q96QK1 VPS35_HUMAN 14 470 DBREF 5F0K D 14 470 UNP Q96QK1 VPS35_HUMAN 14 470 DBREF 5F0K E 14 470 UNP Q96QK1 VPS35_HUMAN 14 470 SEQADV 5F0K GLY A 9 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K ALA A 10 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K MET A 11 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY A 12 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K SER A 13 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY B 9 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K ALA B 10 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K MET B 11 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY B 12 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K SER B 13 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY C 9 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K ALA C 10 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K MET C 11 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY C 12 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K SER C 13 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY D 9 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K ALA D 10 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K MET D 11 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY D 12 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K SER D 13 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY E 9 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K ALA E 10 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K MET E 11 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K GLY E 12 UNP Q96QK1 EXPRESSION TAG SEQADV 5F0K SER E 13 UNP Q96QK1 EXPRESSION TAG SEQRES 1 A 462 GLY ALA MET GLY SER LYS LEU LEU ASP GLU ALA ILE GLN SEQRES 2 A 462 ALA VAL LYS VAL GLN SER PHE GLN MET LYS ARG CYS LEU SEQRES 3 A 462 ASP LYS ASN LYS LEU MET ASP ALA LEU LYS HIS ALA SER SEQRES 4 A 462 ASN MET LEU GLY GLU LEU ARG THR SER MET LEU SER PRO SEQRES 5 A 462 LYS SER TYR TYR GLU LEU TYR MET ALA ILE SER ASP GLU SEQRES 6 A 462 LEU HIS TYR LEU GLU VAL TYR LEU THR ASP GLU PHE ALA SEQRES 7 A 462 LYS GLY ARG LYS VAL ALA ASP LEU TYR GLU LEU VAL GLN SEQRES 8 A 462 TYR ALA GLY ASN ILE ILE PRO ARG LEU TYR LEU LEU ILE SEQRES 9 A 462 THR VAL GLY VAL VAL TYR VAL LYS SER PHE PRO GLN SER SEQRES 10 A 462 ARG LYS ASP ILE LEU LYS ASP LEU VAL GLU MET CYS ARG SEQRES 11 A 462 GLY VAL GLN HIS PRO LEU ARG GLY LEU PHE LEU ARG ASN SEQRES 12 A 462 TYR LEU LEU GLN CYS THR ARG ASN ILE LEU PRO ASP GLU SEQRES 13 A 462 GLY GLU PRO THR ASP GLU GLU THR THR GLY ASP ILE SER SEQRES 14 A 462 ASP SER MET ASP PHE VAL LEU LEU ASN PHE ALA GLU MET SEQRES 15 A 462 ASN LYS LEU TRP VAL ARG MET GLN HIS GLN GLY HIS SER SEQRES 16 A 462 ARG ASP ARG GLU LYS ARG GLU ARG GLU ARG GLN GLU LEU SEQRES 17 A 462 ARG ILE LEU VAL GLY THR ASN LEU VAL ARG LEU SER GLN SEQRES 18 A 462 LEU GLU GLY VAL ASN VAL GLU ARG TYR LYS GLN ILE VAL SEQRES 19 A 462 LEU THR GLY ILE LEU GLU GLN VAL VAL ASN CYS ARG ASP SEQRES 20 A 462 ALA LEU ALA GLN GLU TYR LEU MET GLU CYS ILE ILE GLN SEQRES 21 A 462 VAL PHE PRO ASP GLU PHE HIS LEU GLN THR LEU ASN PRO SEQRES 22 A 462 PHE LEU ARG ALA CYS ALA GLU LEU HIS GLN ASN VAL ASN SEQRES 23 A 462 VAL LYS ASN ILE ILE ILE ALA LEU ILE ASP ARG LEU ALA SEQRES 24 A 462 LEU PHE ALA HIS ARG GLU ASP GLY PRO GLY ILE PRO ALA SEQRES 25 A 462 ASP ILE LYS LEU PHE ASP ILE PHE SER GLN GLN VAL ALA SEQRES 26 A 462 THR VAL ILE GLN SER ARG GLN ASP MET PRO SER GLU ASP SEQRES 27 A 462 VAL VAL SER LEU GLN VAL SER LEU ILE ASN LEU ALA MET SEQRES 28 A 462 LYS CYS TYR PRO ASP ARG VAL ASP TYR VAL ASP LYS VAL SEQRES 29 A 462 LEU GLU THR THR VAL GLU ILE PHE ASN LYS LEU ASN LEU SEQRES 30 A 462 GLU HIS ILE ALA THR SER SER ALA VAL SER LYS GLU LEU SEQRES 31 A 462 THR ARG LEU LEU LYS ILE PRO VAL ASP THR TYR ASN ASN SEQRES 32 A 462 ILE LEU THR VAL LEU LYS LEU LYS HIS PHE HIS PRO LEU SEQRES 33 A 462 PHE GLU TYR PHE ASP TYR GLU SER ARG LYS SER MET SER SEQRES 34 A 462 CYS TYR VAL LEU SER ASN VAL LEU ASP TYR ASN THR GLU SEQRES 35 A 462 ILE VAL SER GLN ASP GLN VAL ASP SER ILE MET ASN LEU SEQRES 36 A 462 VAL SER THR LEU ILE GLN ASP SEQRES 1 B 462 GLY ALA MET GLY SER LYS LEU LEU ASP GLU ALA ILE GLN SEQRES 2 B 462 ALA VAL LYS VAL GLN SER PHE GLN MET LYS ARG CYS LEU SEQRES 3 B 462 ASP LYS ASN LYS LEU MET ASP ALA LEU LYS HIS ALA SER SEQRES 4 B 462 ASN MET LEU GLY GLU LEU ARG THR SER MET LEU SER PRO SEQRES 5 B 462 LYS SER TYR TYR GLU LEU TYR MET ALA ILE SER ASP GLU SEQRES 6 B 462 LEU HIS TYR LEU GLU VAL TYR LEU THR ASP GLU PHE ALA SEQRES 7 B 462 LYS GLY ARG LYS VAL ALA ASP LEU TYR GLU LEU VAL GLN SEQRES 8 B 462 TYR ALA GLY ASN ILE ILE PRO ARG LEU TYR LEU LEU ILE SEQRES 9 B 462 THR VAL GLY VAL VAL TYR VAL LYS SER PHE PRO GLN SER SEQRES 10 B 462 ARG LYS ASP ILE LEU LYS ASP LEU VAL GLU MET CYS ARG SEQRES 11 B 462 GLY VAL GLN HIS PRO LEU ARG GLY LEU PHE LEU ARG ASN SEQRES 12 B 462 TYR LEU LEU GLN CYS THR ARG ASN ILE LEU PRO ASP GLU SEQRES 13 B 462 GLY GLU PRO THR ASP GLU GLU THR THR GLY ASP ILE SER SEQRES 14 B 462 ASP SER MET ASP PHE VAL LEU LEU ASN PHE ALA GLU MET SEQRES 15 B 462 ASN LYS LEU TRP VAL ARG MET GLN HIS GLN GLY HIS SER SEQRES 16 B 462 ARG ASP ARG GLU LYS ARG GLU ARG GLU ARG GLN GLU LEU SEQRES 17 B 462 ARG ILE LEU VAL GLY THR ASN LEU VAL ARG LEU SER GLN SEQRES 18 B 462 LEU GLU GLY VAL ASN VAL GLU ARG TYR LYS GLN ILE VAL SEQRES 19 B 462 LEU THR GLY ILE LEU GLU GLN VAL VAL ASN CYS ARG ASP SEQRES 20 B 462 ALA LEU ALA GLN GLU TYR LEU MET GLU CYS ILE ILE GLN SEQRES 21 B 462 VAL PHE PRO ASP GLU PHE HIS LEU GLN THR LEU ASN PRO SEQRES 22 B 462 PHE LEU ARG ALA CYS ALA GLU LEU HIS GLN ASN VAL ASN SEQRES 23 B 462 VAL LYS ASN ILE ILE ILE ALA LEU ILE ASP ARG LEU ALA SEQRES 24 B 462 LEU PHE ALA HIS ARG GLU ASP GLY PRO GLY ILE PRO ALA SEQRES 25 B 462 ASP ILE LYS LEU PHE ASP ILE PHE SER GLN GLN VAL ALA SEQRES 26 B 462 THR VAL ILE GLN SER ARG GLN ASP MET PRO SER GLU ASP SEQRES 27 B 462 VAL VAL SER LEU GLN VAL SER LEU ILE ASN LEU ALA MET SEQRES 28 B 462 LYS CYS TYR PRO ASP ARG VAL ASP TYR VAL ASP LYS VAL SEQRES 29 B 462 LEU GLU THR THR VAL GLU ILE PHE ASN LYS LEU ASN LEU SEQRES 30 B 462 GLU HIS ILE ALA THR SER SER ALA VAL SER LYS GLU LEU SEQRES 31 B 462 THR ARG LEU LEU LYS ILE PRO VAL ASP THR TYR ASN ASN SEQRES 32 B 462 ILE LEU THR VAL LEU LYS LEU LYS HIS PHE HIS PRO LEU SEQRES 33 B 462 PHE GLU TYR PHE ASP TYR GLU SER ARG LYS SER MET SER SEQRES 34 B 462 CYS TYR VAL LEU SER ASN VAL LEU ASP TYR ASN THR GLU SEQRES 35 B 462 ILE VAL SER GLN ASP GLN VAL ASP SER ILE MET ASN LEU SEQRES 36 B 462 VAL SER THR LEU ILE GLN ASP SEQRES 1 C 462 GLY ALA MET GLY SER LYS LEU LEU ASP GLU ALA ILE GLN SEQRES 2 C 462 ALA VAL LYS VAL GLN SER PHE GLN MET LYS ARG CYS LEU SEQRES 3 C 462 ASP LYS ASN LYS LEU MET ASP ALA LEU LYS HIS ALA SER SEQRES 4 C 462 ASN MET LEU GLY GLU LEU ARG THR SER MET LEU SER PRO SEQRES 5 C 462 LYS SER TYR TYR GLU LEU TYR MET ALA ILE SER ASP GLU SEQRES 6 C 462 LEU HIS TYR LEU GLU VAL TYR LEU THR ASP GLU PHE ALA SEQRES 7 C 462 LYS GLY ARG LYS VAL ALA ASP LEU TYR GLU LEU VAL GLN SEQRES 8 C 462 TYR ALA GLY ASN ILE ILE PRO ARG LEU TYR LEU LEU ILE SEQRES 9 C 462 THR VAL GLY VAL VAL TYR VAL LYS SER PHE PRO GLN SER SEQRES 10 C 462 ARG LYS ASP ILE LEU LYS ASP LEU VAL GLU MET CYS ARG SEQRES 11 C 462 GLY VAL GLN HIS PRO LEU ARG GLY LEU PHE LEU ARG ASN SEQRES 12 C 462 TYR LEU LEU GLN CYS THR ARG ASN ILE LEU PRO ASP GLU SEQRES 13 C 462 GLY GLU PRO THR ASP GLU GLU THR THR GLY ASP ILE SER SEQRES 14 C 462 ASP SER MET ASP PHE VAL LEU LEU ASN PHE ALA GLU MET SEQRES 15 C 462 ASN LYS LEU TRP VAL ARG MET GLN HIS GLN GLY HIS SER SEQRES 16 C 462 ARG ASP ARG GLU LYS ARG GLU ARG GLU ARG GLN GLU LEU SEQRES 17 C 462 ARG ILE LEU VAL GLY THR ASN LEU VAL ARG LEU SER GLN SEQRES 18 C 462 LEU GLU GLY VAL ASN VAL GLU ARG TYR LYS GLN ILE VAL SEQRES 19 C 462 LEU THR GLY ILE LEU GLU GLN VAL VAL ASN CYS ARG ASP SEQRES 20 C 462 ALA LEU ALA GLN GLU TYR LEU MET GLU CYS ILE ILE GLN SEQRES 21 C 462 VAL PHE PRO ASP GLU PHE HIS LEU GLN THR LEU ASN PRO SEQRES 22 C 462 PHE LEU ARG ALA CYS ALA GLU LEU HIS GLN ASN VAL ASN SEQRES 23 C 462 VAL LYS ASN ILE ILE ILE ALA LEU ILE ASP ARG LEU ALA SEQRES 24 C 462 LEU PHE ALA HIS ARG GLU ASP GLY PRO GLY ILE PRO ALA SEQRES 25 C 462 ASP ILE LYS LEU PHE ASP ILE PHE SER GLN GLN VAL ALA SEQRES 26 C 462 THR VAL ILE GLN SER ARG GLN ASP MET PRO SER GLU ASP SEQRES 27 C 462 VAL VAL SER LEU GLN VAL SER LEU ILE ASN LEU ALA MET SEQRES 28 C 462 LYS CYS TYR PRO ASP ARG VAL ASP TYR VAL ASP LYS VAL SEQRES 29 C 462 LEU GLU THR THR VAL GLU ILE PHE ASN LYS LEU ASN LEU SEQRES 30 C 462 GLU HIS ILE ALA THR SER SER ALA VAL SER LYS GLU LEU SEQRES 31 C 462 THR ARG LEU LEU LYS ILE PRO VAL ASP THR TYR ASN ASN SEQRES 32 C 462 ILE LEU THR VAL LEU LYS LEU LYS HIS PHE HIS PRO LEU SEQRES 33 C 462 PHE GLU TYR PHE ASP TYR GLU SER ARG LYS SER MET SER SEQRES 34 C 462 CYS TYR VAL LEU SER ASN VAL LEU ASP TYR ASN THR GLU SEQRES 35 C 462 ILE VAL SER GLN ASP GLN VAL ASP SER ILE MET ASN LEU SEQRES 36 C 462 VAL SER THR LEU ILE GLN ASP SEQRES 1 D 462 GLY ALA MET GLY SER LYS LEU LEU ASP GLU ALA ILE GLN SEQRES 2 D 462 ALA VAL LYS VAL GLN SER PHE GLN MET LYS ARG CYS LEU SEQRES 3 D 462 ASP LYS ASN LYS LEU MET ASP ALA LEU LYS HIS ALA SER SEQRES 4 D 462 ASN MET LEU GLY GLU LEU ARG THR SER MET LEU SER PRO SEQRES 5 D 462 LYS SER TYR TYR GLU LEU TYR MET ALA ILE SER ASP GLU SEQRES 6 D 462 LEU HIS TYR LEU GLU VAL TYR LEU THR ASP GLU PHE ALA SEQRES 7 D 462 LYS GLY ARG LYS VAL ALA ASP LEU TYR GLU LEU VAL GLN SEQRES 8 D 462 TYR ALA GLY ASN ILE ILE PRO ARG LEU TYR LEU LEU ILE SEQRES 9 D 462 THR VAL GLY VAL VAL TYR VAL LYS SER PHE PRO GLN SER SEQRES 10 D 462 ARG LYS ASP ILE LEU LYS ASP LEU VAL GLU MET CYS ARG SEQRES 11 D 462 GLY VAL GLN HIS PRO LEU ARG GLY LEU PHE LEU ARG ASN SEQRES 12 D 462 TYR LEU LEU GLN CYS THR ARG ASN ILE LEU PRO ASP GLU SEQRES 13 D 462 GLY GLU PRO THR ASP GLU GLU THR THR GLY ASP ILE SER SEQRES 14 D 462 ASP SER MET ASP PHE VAL LEU LEU ASN PHE ALA GLU MET SEQRES 15 D 462 ASN LYS LEU TRP VAL ARG MET GLN HIS GLN GLY HIS SER SEQRES 16 D 462 ARG ASP ARG GLU LYS ARG GLU ARG GLU ARG GLN GLU LEU SEQRES 17 D 462 ARG ILE LEU VAL GLY THR ASN LEU VAL ARG LEU SER GLN SEQRES 18 D 462 LEU GLU GLY VAL ASN VAL GLU ARG TYR LYS GLN ILE VAL SEQRES 19 D 462 LEU THR GLY ILE LEU GLU GLN VAL VAL ASN CYS ARG ASP SEQRES 20 D 462 ALA LEU ALA GLN GLU TYR LEU MET GLU CYS ILE ILE GLN SEQRES 21 D 462 VAL PHE PRO ASP GLU PHE HIS LEU GLN THR LEU ASN PRO SEQRES 22 D 462 PHE LEU ARG ALA CYS ALA GLU LEU HIS GLN ASN VAL ASN SEQRES 23 D 462 VAL LYS ASN ILE ILE ILE ALA LEU ILE ASP ARG LEU ALA SEQRES 24 D 462 LEU PHE ALA HIS ARG GLU ASP GLY PRO GLY ILE PRO ALA SEQRES 25 D 462 ASP ILE LYS LEU PHE ASP ILE PHE SER GLN GLN VAL ALA SEQRES 26 D 462 THR VAL ILE GLN SER ARG GLN ASP MET PRO SER GLU ASP SEQRES 27 D 462 VAL VAL SER LEU GLN VAL SER LEU ILE ASN LEU ALA MET SEQRES 28 D 462 LYS CYS TYR PRO ASP ARG VAL ASP TYR VAL ASP LYS VAL SEQRES 29 D 462 LEU GLU THR THR VAL GLU ILE PHE ASN LYS LEU ASN LEU SEQRES 30 D 462 GLU HIS ILE ALA THR SER SER ALA VAL SER LYS GLU LEU SEQRES 31 D 462 THR ARG LEU LEU LYS ILE PRO VAL ASP THR TYR ASN ASN SEQRES 32 D 462 ILE LEU THR VAL LEU LYS LEU LYS HIS PHE HIS PRO LEU SEQRES 33 D 462 PHE GLU TYR PHE ASP TYR GLU SER ARG LYS SER MET SER SEQRES 34 D 462 CYS TYR VAL LEU SER ASN VAL LEU ASP TYR ASN THR GLU SEQRES 35 D 462 ILE VAL SER GLN ASP GLN VAL ASP SER ILE MET ASN LEU SEQRES 36 D 462 VAL SER THR LEU ILE GLN ASP SEQRES 1 E 462 GLY ALA MET GLY SER LYS LEU LEU ASP GLU ALA ILE GLN SEQRES 2 E 462 ALA VAL LYS VAL GLN SER PHE GLN MET LYS ARG CYS LEU SEQRES 3 E 462 ASP LYS ASN LYS LEU MET ASP ALA LEU LYS HIS ALA SER SEQRES 4 E 462 ASN MET LEU GLY GLU LEU ARG THR SER MET LEU SER PRO SEQRES 5 E 462 LYS SER TYR TYR GLU LEU TYR MET ALA ILE SER ASP GLU SEQRES 6 E 462 LEU HIS TYR LEU GLU VAL TYR LEU THR ASP GLU PHE ALA SEQRES 7 E 462 LYS GLY ARG LYS VAL ALA ASP LEU TYR GLU LEU VAL GLN SEQRES 8 E 462 TYR ALA GLY ASN ILE ILE PRO ARG LEU TYR LEU LEU ILE SEQRES 9 E 462 THR VAL GLY VAL VAL TYR VAL LYS SER PHE PRO GLN SER SEQRES 10 E 462 ARG LYS ASP ILE LEU LYS ASP LEU VAL GLU MET CYS ARG SEQRES 11 E 462 GLY VAL GLN HIS PRO LEU ARG GLY LEU PHE LEU ARG ASN SEQRES 12 E 462 TYR LEU LEU GLN CYS THR ARG ASN ILE LEU PRO ASP GLU SEQRES 13 E 462 GLY GLU PRO THR ASP GLU GLU THR THR GLY ASP ILE SER SEQRES 14 E 462 ASP SER MET ASP PHE VAL LEU LEU ASN PHE ALA GLU MET SEQRES 15 E 462 ASN LYS LEU TRP VAL ARG MET GLN HIS GLN GLY HIS SER SEQRES 16 E 462 ARG ASP ARG GLU LYS ARG GLU ARG GLU ARG GLN GLU LEU SEQRES 17 E 462 ARG ILE LEU VAL GLY THR ASN LEU VAL ARG LEU SER GLN SEQRES 18 E 462 LEU GLU GLY VAL ASN VAL GLU ARG TYR LYS GLN ILE VAL SEQRES 19 E 462 LEU THR GLY ILE LEU GLU GLN VAL VAL ASN CYS ARG ASP SEQRES 20 E 462 ALA LEU ALA GLN GLU TYR LEU MET GLU CYS ILE ILE GLN SEQRES 21 E 462 VAL PHE PRO ASP GLU PHE HIS LEU GLN THR LEU ASN PRO SEQRES 22 E 462 PHE LEU ARG ALA CYS ALA GLU LEU HIS GLN ASN VAL ASN SEQRES 23 E 462 VAL LYS ASN ILE ILE ILE ALA LEU ILE ASP ARG LEU ALA SEQRES 24 E 462 LEU PHE ALA HIS ARG GLU ASP GLY PRO GLY ILE PRO ALA SEQRES 25 E 462 ASP ILE LYS LEU PHE ASP ILE PHE SER GLN GLN VAL ALA SEQRES 26 E 462 THR VAL ILE GLN SER ARG GLN ASP MET PRO SER GLU ASP SEQRES 27 E 462 VAL VAL SER LEU GLN VAL SER LEU ILE ASN LEU ALA MET SEQRES 28 E 462 LYS CYS TYR PRO ASP ARG VAL ASP TYR VAL ASP LYS VAL SEQRES 29 E 462 LEU GLU THR THR VAL GLU ILE PHE ASN LYS LEU ASN LEU SEQRES 30 E 462 GLU HIS ILE ALA THR SER SER ALA VAL SER LYS GLU LEU SEQRES 31 E 462 THR ARG LEU LEU LYS ILE PRO VAL ASP THR TYR ASN ASN SEQRES 32 E 462 ILE LEU THR VAL LEU LYS LEU LYS HIS PHE HIS PRO LEU SEQRES 33 E 462 PHE GLU TYR PHE ASP TYR GLU SER ARG LYS SER MET SER SEQRES 34 E 462 CYS TYR VAL LEU SER ASN VAL LEU ASP TYR ASN THR GLU SEQRES 35 E 462 ILE VAL SER GLN ASP GLN VAL ASP SER ILE MET ASN LEU SEQRES 36 E 462 VAL SER THR LEU ILE GLN ASP HET EDO A 501 10 HET EDO A 502 10 HET EDO A 503 10 HET EDO A 504 10 HET EDO A 505 10 HET GOL A 506 14 HET SO4 A 507 5 HET EDO B 501 10 HET EDO B 502 10 HET GOL B 503 14 HET GOL B 504 14 HET GOL B 505 14 HET SO4 B 506 5 HET EDO C 501 10 HET EDO C 502 10 HET GOL C 503 14 HET PG4 C 504 31 HET EDO D 501 10 HET EDO D 502 10 HET EDO D 503 10 HET GOL D 504 14 HET GOL D 505 14 HET EDO E 501 10 HET EDO E 502 10 HET GOL E 503 14 HET GOL E 504 14 HET SO4 E 505 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 6 EDO 14(C2 H6 O2) FORMUL 11 GOL 9(C3 H8 O3) FORMUL 12 SO4 3(O4 S 2-) FORMUL 22 PG4 C8 H18 O5 FORMUL 33 HOH *18(H2 O) HELIX 1 AA1 GLY A 12 LYS A 36 1 25 HELIX 2 AA2 LYS A 38 GLY A 51 1 14 HELIX 3 AA3 GLU A 52 THR A 55 5 4 HELIX 4 AA4 SER A 59 ALA A 86 1 28 HELIX 5 AA5 LYS A 90 GLN A 99 1 10 HELIX 6 AA6 ASN A 103 SER A 121 1 19 HELIX 7 AA7 PHE A 122 GLN A 124 5 3 HELIX 8 AA8 SER A 125 CYS A 137 1 13 HELIX 9 AA9 ARG A 138 VAL A 140 5 3 HELIX 10 AB1 HIS A 142 THR A 157 1 16 HELIX 11 AB2 ASP A 175 MET A 197 1 23 HELIX 12 AB3 GLU A 210 GLN A 229 1 20 HELIX 13 AB4 ASN A 234 ILE A 241 1 8 HELIX 14 AB5 ILE A 241 ASN A 252 1 12 HELIX 15 AB6 ASP A 255 PHE A 270 1 16 HELIX 16 AB7 PRO A 271 LEU A 276 1 6 HELIX 17 AB8 THR A 278 GLU A 288 1 11 HELIX 18 AB9 ASN A 294 HIS A 311 1 18 HELIX 19 AC1 LYS A 323 ARG A 339 1 17 HELIX 20 AC2 PRO A 343 CYS A 361 1 19 HELIX 21 AC3 ARG A 365 LYS A 382 1 18 HELIX 22 AC4 SER A 392 TYR A 409 1 18 HELIX 23 AC5 ASN A 411 LEU A 416 1 6 HELIX 24 AC6 HIS A 420 GLU A 426 1 7 HELIX 25 AC7 ASP A 429 VAL A 444 1 16 HELIX 26 AC8 GLN A 456 GLN A 469 1 14 HELIX 27 AC9 GLY B 12 ASN B 37 1 26 HELIX 28 AD1 LYS B 38 LEU B 50 1 13 HELIX 29 AD2 GLY B 51 THR B 55 5 5 HELIX 30 AD3 SER B 59 PHE B 85 1 27 HELIX 31 AD4 ARG B 89 VAL B 98 1 10 HELIX 32 AD5 GLN B 99 ALA B 101 5 3 HELIX 33 AD6 ASN B 103 LYS B 120 1 18 HELIX 34 AD7 SER B 121 GLN B 124 5 4 HELIX 35 AD8 SER B 125 ARG B 138 1 14 HELIX 36 AD9 HIS B 142 THR B 157 1 16 HELIX 37 AE1 ASP B 175 MET B 197 1 23 HELIX 38 AE2 GLN B 198 GLN B 200 5 3 HELIX 39 AE3 ARG B 206 GLN B 214 1 9 HELIX 40 AE4 LEU B 216 GLN B 229 1 14 HELIX 41 AE5 ASN B 234 ILE B 241 1 8 HELIX 42 AE6 ILE B 241 ASN B 252 1 12 HELIX 43 AE7 ASP B 255 PHE B 270 1 16 HELIX 44 AE8 PRO B 271 GLN B 277 1 7 HELIX 45 AE9 THR B 278 ARG B 284 1 7 HELIX 46 AF1 ARG B 284 LEU B 289 1 6 HELIX 47 AF2 ASN B 294 PHE B 309 1 16 HELIX 48 AF3 LYS B 323 GLN B 337 1 15 HELIX 49 AF4 PRO B 343 TYR B 362 1 20 HELIX 50 AF5 ARG B 365 ASN B 381 1 17 HELIX 51 AF6 SER B 391 TYR B 409 1 19 HELIX 52 AF7 THR B 414 LEU B 418 5 5 HELIX 53 AF8 HIS B 420 GLU B 426 1 7 HELIX 54 AF9 ASP B 429 ASN B 443 1 15 HELIX 55 AG1 ASP B 458 ILE B 468 1 11 HELIX 56 AG2 GLY C 12 LYS C 36 1 25 HELIX 57 AG3 LYS C 38 GLY C 51 1 14 HELIX 58 AG4 GLU C 52 THR C 55 5 4 HELIX 59 AG5 SER C 59 PHE C 85 1 27 HELIX 60 AG6 GLY C 88 VAL C 98 1 11 HELIX 61 AG7 GLN C 99 ALA C 101 5 3 HELIX 62 AG8 ASN C 103 PHE C 122 1 20 HELIX 63 AG9 SER C 125 CYS C 137 1 13 HELIX 64 AH1 ARG C 138 VAL C 140 5 3 HELIX 65 AH2 HIS C 142 ARG C 158 1 17 HELIX 66 AH3 ASN C 159 LEU C 161 5 3 HELIX 67 AH4 ASP C 175 MET C 197 1 23 HELIX 68 AH5 ARG C 209 GLN C 214 1 6 HELIX 69 AH6 LEU C 216 LEU C 230 1 15 HELIX 70 AH7 ASN C 234 ILE C 241 1 8 HELIX 71 AH8 ILE C 241 CYS C 253 1 13 HELIX 72 AH9 ASP C 255 PHE C 270 1 16 HELIX 73 AI1 PRO C 271 LEU C 276 1 6 HELIX 74 AI2 THR C 278 LEU C 289 1 12 HELIX 75 AI3 ASN C 294 HIS C 311 1 18 HELIX 76 AI4 LYS C 323 ARG C 339 1 17 HELIX 77 AI5 PRO C 343 TYR C 362 1 20 HELIX 78 AI6 ARG C 365 ASN C 384 1 20 HELIX 79 AI7 ALA C 393 TYR C 409 1 17 HELIX 80 AI8 THR C 414 LEU C 418 5 5 HELIX 81 AI9 SER C 432 VAL C 444 1 13 HELIX 82 AJ1 GLN C 456 GLN C 469 1 14 HELIX 83 AJ2 SER D 13 LYS D 36 1 24 HELIX 84 AJ3 LYS D 38 GLY D 51 1 14 HELIX 85 AJ4 GLU D 52 THR D 55 5 4 HELIX 86 AJ5 SER D 59 PHE D 85 1 27 HELIX 87 AJ6 ARG D 89 TYR D 100 1 12 HELIX 88 AJ7 ASN D 103 PHE D 122 1 20 HELIX 89 AJ8 SER D 125 CYS D 137 1 13 HELIX 90 AJ9 ARG D 138 VAL D 140 5 3 HELIX 91 AK1 HIS D 142 THR D 157 1 16 HELIX 92 AK2 ASP D 175 MET D 197 1 23 HELIX 93 AK3 LYS D 208 LEU D 216 1 9 HELIX 94 AK4 LEU D 216 GLN D 229 1 14 HELIX 95 AK5 ASN D 234 ILE D 241 1 8 HELIX 96 AK6 ILE D 241 ARG D 254 1 14 HELIX 97 AK7 ASP D 255 PHE D 270 1 16 HELIX 98 AK8 PRO D 271 GLN D 277 1 7 HELIX 99 AK9 THR D 278 LEU D 289 1 12 HELIX 100 AL1 ASN D 294 LEU D 308 1 15 HELIX 101 AL2 LYS D 323 SER D 338 1 16 HELIX 102 AL3 PRO D 343 CYS D 361 1 19 HELIX 103 AL4 ARG D 365 ASN D 381 1 17 HELIX 104 AL5 ALA D 393 ILE D 404 1 12 HELIX 105 AL6 HIS D 422 GLU D 426 5 5 HELIX 106 AL7 ASP D 429 LEU D 445 1 17 HELIX 107 AL8 GLN D 456 ILE D 468 1 13 HELIX 108 AL9 SER E 13 LYS E 36 1 24 HELIX 109 AM1 LYS E 38 LEU E 50 1 13 HELIX 110 AM2 GLY E 51 THR E 55 5 5 HELIX 111 AM3 SER E 59 PHE E 85 1 27 HELIX 112 AM4 LYS E 90 GLN E 99 1 10 HELIX 113 AM5 ASN E 103 LYS E 120 1 18 HELIX 114 AM6 PHE E 122 GLN E 124 5 3 HELIX 115 AM7 SER E 125 CYS E 137 1 13 HELIX 116 AM8 ARG E 138 VAL E 140 5 3 HELIX 117 AM9 HIS E 142 ARG E 158 1 17 HELIX 118 AN1 ASP E 175 ARG E 196 1 22 HELIX 119 AN2 ASP E 205 LEU E 216 1 12 HELIX 120 AN3 LEU E 216 SER E 228 1 13 HELIX 121 AN4 ASN E 234 ILE E 241 1 8 HELIX 122 AN5 ILE E 241 ARG E 254 1 14 HELIX 123 AN6 ASP E 255 PHE E 270 1 16 HELIX 124 AN7 PRO E 271 GLN E 277 1 7 HELIX 125 AN8 THR E 278 LEU E 289 1 12 HELIX 126 AN9 ASN E 294 ARG E 312 1 19 HELIX 127 AO1 LYS E 323 ARG E 339 1 17 HELIX 128 AO2 PRO E 343 TYR E 362 1 20 HELIX 129 AO3 ASP E 367 ASN E 381 1 15 HELIX 130 AO4 SER E 392 ASP E 407 1 16 HELIX 131 AO5 LEU E 413 LYS E 417 5 5 HELIX 132 AO6 SER E 435 VAL E 444 1 10 HELIX 133 AO7 ASP E 455 GLN E 469 1 15 CISPEP 1 GLY C 102 ASN C 103 0 0.87 CISPEP 2 THR C 172 THR C 173 0 -16.87 CISPEP 3 GLY D 88 ARG D 89 0 1.43 CISPEP 4 THR D 168 ASP D 169 0 1.95 SITE 1 AC1 3 LEU A 43 LEU A 97 VAL A 98 SITE 1 AC2 2 ASN D 280 PRO D 281 SITE 1 AC3 3 GLN A 141 HIS A 142 ARG A 145 SITE 1 AC4 3 ARG A 54 ASN A 103 ILE A 104 SITE 1 AC5 3 GLN A 291 ASN A 292 ASP A 341 SITE 1 AC6 3 LYS A 31 TYR A 76 PHE B 28 SITE 1 AC7 6 ASN A 37 LEU A 39 MET A 40 LYS A 90 SITE 2 AC7 6 LYS E 90 SO4 E 505 SITE 1 AC8 4 GLU A 231 ARG B 54 ASN B 103 ILE B 104 SITE 1 AC9 2 GLN B 141 HIS B 142 SITE 1 AD1 2 LEU B 97 ALA B 101 SITE 1 AD2 1 TYR B 118 SITE 1 AD3 2 LYS B 31 PHE E 28 SITE 1 AD4 3 LEU B 39 MET B 40 LYS B 90 SITE 1 AD5 4 VAL C 140 GLN C 141 HIS C 142 ARG C 145 SITE 1 AD6 1 LYS C 31 SITE 1 AD7 4 ASN C 37 LEU C 39 MET C 40 LYS C 90 SITE 1 AD8 2 ASN C 280 ARG C 284 SITE 1 AD9 3 ARG D 54 ASN D 103 ILE D 104 SITE 1 AE1 2 ARG C 158 GLY D 51 SITE 1 AE2 3 ARG A 284 GLN D 330 LYS D 371 SITE 1 AE3 4 VAL A 25 PHE A 28 LYS D 31 TYR D 76 SITE 1 AE4 5 GLY A 51 ARG D 158 ASN D 159 ARG D 226 SITE 2 AE4 5 GLN D 229 SITE 1 AE5 3 ASN B 280 ARG B 284 GLY E 174 SITE 1 AE6 4 GLN E 141 HIS E 142 ARG E 145 GOL E 503 SITE 1 AE7 5 ARG E 54 ASN E 103 ILE E 104 ILE E 105 SITE 2 AE7 5 EDO E 502 SITE 1 AE8 2 VAL C 25 LYS E 31 SITE 1 AE9 5 LYS A 90 SO4 A 507 LYS E 38 LEU E 39 SITE 2 AE9 5 MET E 40 CRYST1 200.700 108.600 167.900 90.00 125.50 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004983 0.000000 0.003554 0.00000 SCALE2 0.000000 0.009208 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007316 0.00000