HEADER IMMUNE SYSTEM 30-NOV-15 5F1T TITLE CRYSTAL STRUCTURE OF A MACROCYCLIC PEPTIDE CONTAINING FRAGMENTS FROM TITLE 2 ALPHA-SYNUCLEIN 36-55. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACROCYCLIC PEPTIDE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS BETA-HAIRPINS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.J.SALVESON,R.K.SPENCER,J.S.NOWICK REVDAT 2 27-APR-16 5F1T 1 JRNL REVDAT 1 16-MAR-16 5F1T 0 JRNL AUTH P.J.SALVESON,R.K.SPENCER,J.S.NOWICK JRNL TITL X-RAY CRYSTALLOGRAPHIC STRUCTURE OF OLIGOMERS FORMED BY A JRNL TITL 2 TOXIC BETA-HAIRPIN DERIVED FROM ALPHA-SYNUCLEIN: TRIMERS AND JRNL TITL 3 HIGHER-ORDER OLIGOMERS. JRNL REF J.AM.CHEM.SOC. V. 138 4458 2016 JRNL REFN ESSN 1520-5126 JRNL PMID 26926877 JRNL DOI 10.1021/JACS.5B13261 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 21093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.280 REMARK 3 FREE R VALUE TEST SET COUNT : 2168 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.4093 - 4.8553 0.89 1263 148 0.1995 0.2269 REMARK 3 2 4.8553 - 3.8572 0.90 1266 136 0.1247 0.1497 REMARK 3 3 3.8572 - 3.3706 0.90 1271 136 0.1473 0.1840 REMARK 3 4 3.3706 - 3.0629 0.90 1272 144 0.1293 0.1772 REMARK 3 5 3.0629 - 2.8436 0.90 1290 137 0.1537 0.2052 REMARK 3 6 2.8436 - 2.6761 0.90 1262 144 0.1739 0.1974 REMARK 3 7 2.6761 - 2.5422 0.90 1279 142 0.1881 0.2216 REMARK 3 8 2.5422 - 2.4316 0.90 1261 146 0.2011 0.2189 REMARK 3 9 2.4316 - 2.3380 0.89 1267 156 0.1868 0.2468 REMARK 3 10 2.3380 - 2.2574 0.90 1277 144 0.2142 0.2229 REMARK 3 11 2.2574 - 2.1868 0.82 1145 143 0.4033 0.4864 REMARK 3 12 2.1868 - 2.1244 0.90 1296 140 0.2147 0.2697 REMARK 3 13 2.1244 - 2.0684 0.89 1223 145 0.2181 0.2326 REMARK 3 14 2.0684 - 2.0180 0.89 1283 146 0.2956 0.3554 REMARK 3 15 2.0180 - 1.9721 0.89 1250 149 0.2435 0.2936 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 724 REMARK 3 ANGLE : 1.509 988 REMARK 3 CHIRALITY : 0.052 131 REMARK 3 PLANARITY : 0.006 117 REMARK 3 DIHEDRAL : 27.573 301 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN C AND RESID 1:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6046 38.9953 65.8939 REMARK 3 T TENSOR REMARK 3 T11: 0.1583 T22: 0.1552 REMARK 3 T33: 0.1262 T12: 0.0234 REMARK 3 T13: 0.0155 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 3.7917 L22: 3.9190 REMARK 3 L33: 2.8313 L12: -2.5621 REMARK 3 L13: 1.6118 L23: 0.4304 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: 0.1977 S13: 0.2688 REMARK 3 S21: -0.2087 S22: -0.0124 S23: -0.3110 REMARK 3 S31: -0.4645 S32: -0.1307 S33: -0.0040 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4746 36.0247 70.1365 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.2160 REMARK 3 T33: 0.3065 T12: -0.0099 REMARK 3 T13: 0.0085 T23: 0.0776 REMARK 3 L TENSOR REMARK 3 L11: 7.5648 L22: 3.8401 REMARK 3 L33: 7.9396 L12: -0.5755 REMARK 3 L13: -2.7289 L23: 2.8777 REMARK 3 S TENSOR REMARK 3 S11: 0.3875 S12: -0.0528 S13: 0.4369 REMARK 3 S21: 0.4871 S22: -0.1565 S23: 0.1003 REMARK 3 S31: -0.2889 S32: -0.1148 S33: -0.1527 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.8727 24.2527 59.2562 REMARK 3 T TENSOR REMARK 3 T11: 0.1041 T22: 0.1478 REMARK 3 T33: 0.1126 T12: -0.0020 REMARK 3 T13: 0.0014 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 5.3990 L22: 8.2004 REMARK 3 L33: 7.9896 L12: 3.1899 REMARK 3 L13: 3.8346 L23: 5.5588 REMARK 3 S TENSOR REMARK 3 S11: 0.0434 S12: 0.1010 S13: -0.2843 REMARK 3 S21: -0.0509 S22: -0.1397 S23: 0.3137 REMARK 3 S31: 0.2688 S32: -0.2339 S33: 0.0624 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 1:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.1832 13.0399 62.6132 REMARK 3 T TENSOR REMARK 3 T11: 0.2265 T22: 0.2234 REMARK 3 T33: 0.2505 T12: -0.0224 REMARK 3 T13: -0.0682 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 3.4184 L22: 8.8654 REMARK 3 L33: 7.4142 L12: -4.1061 REMARK 3 L13: 1.7296 L23: 0.2511 REMARK 3 S TENSOR REMARK 3 S11: 0.1435 S12: 0.7353 S13: -0.0037 REMARK 3 S21: -0.0387 S22: 0.0539 S23: -0.6141 REMARK 3 S31: 0.1997 S32: 0.6041 S33: -0.1772 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN E AND RESID 1:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.9275 15.1904 53.6692 REMARK 3 T TENSOR REMARK 3 T11: 0.2680 T22: 0.2577 REMARK 3 T33: 0.2636 T12: -0.0871 REMARK 3 T13: 0.0007 T23: -0.0772 REMARK 3 L TENSOR REMARK 3 L11: 7.8301 L22: 4.3852 REMARK 3 L33: 8.0834 L12: 4.5675 REMARK 3 L13: -5.2383 L23: -5.8066 REMARK 3 S TENSOR REMARK 3 S11: 0.1088 S12: -0.3082 S13: 0.0475 REMARK 3 S21: -0.1738 S22: -0.2715 S23: -0.2318 REMARK 3 S31: 0.0509 S32: 0.7593 S33: 0.0407 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN F AND RESID 1:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8569 30.9054 78.0309 REMARK 3 T TENSOR REMARK 3 T11: 0.1856 T22: 0.2586 REMARK 3 T33: 0.2867 T12: -0.0959 REMARK 3 T13: 0.0671 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 7.5448 L22: 5.6778 REMARK 3 L33: 7.6873 L12: -3.6568 REMARK 3 L13: 3.4879 L23: -2.3496 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: 0.1411 S13: 0.6117 REMARK 3 S21: 0.3383 S22: 0.1912 S23: -0.2371 REMARK 3 S31: -0.5987 S32: 0.3576 S33: -0.1645 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F1T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11211 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.971 REMARK 200 RESOLUTION RANGE LOW (A) : 38.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES (PH 8.0), 0.5 M AMMONIUM REMARK 280 SULFATE, 34% 2-METHYL-2,4-PENTANEDIOL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.75900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.75900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.75900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.75900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.75900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.75900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 38.75900 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 38.75900 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 38.75900 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 38.75900 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 38.75900 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 38.75900 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 38.75900 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 38.75900 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 38.75900 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 38.75900 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 38.75900 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 38.75900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTADECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTADECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -304.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 116.27700 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 77.51800 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 38.75900 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 77.51800 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -38.75900 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 116.27700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 B 102 LIES ON A SPECIAL POSITION. REMARK 375 O4 SO4 B 102 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 206 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 218 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 216 O HOH B 217 1.94 REMARK 500 O HOH B 202 O HOH B 213 2.12 REMARK 500 O HOH F 109 O HOH F 111 2.14 REMARK 500 O HOH C 215 O HOH C 217 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 215 O HOH D 218 7665 2.18 REMARK 500 O HOH A 215 O HOH C 210 10646 2.18 REMARK 500 O HOH D 220 O HOH E 115 10646 2.19 REMARK 500 O HOH C 213 O HOH D 204 7665 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 217 DISTANCE = 6.97 ANGSTROMS REMARK 525 HOH B 216 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B 217 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH C 220 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH C 221 DISTANCE = 7.03 ANGSTROMS REMARK 525 HOH D 219 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH D 220 DISTANCE = 7.79 ANGSTROMS REMARK 525 HOH D 221 DISTANCE = 8.95 ANGSTROMS REMARK 525 HOH F 115 DISTANCE = 5.86 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MRD C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL D 101 DBREF 5F1T A 1 16 PDB 5F1T 5F1T 1 16 DBREF 5F1T B 1 16 PDB 5F1T 5F1T 1 16 DBREF 5F1T C 1 16 PDB 5F1T 5F1T 1 16 DBREF 5F1T D 1 16 PDB 5F1T 5F1T 1 16 DBREF 5F1T E 1 16 PDB 5F1T 5F1T 1 16 DBREF 5F1T F 1 16 PDB 5F1T 5F1T 1 16 SEQRES 1 A 16 ORN ALA VAL LEU PHI VAL GLY SER ORN VAL HIS GLY MVA SEQRES 2 A 16 ALA THR VAL SEQRES 1 B 16 ORN ALA VAL LEU PHI VAL GLY SER ORN VAL HIS GLY MVA SEQRES 2 B 16 ALA THR VAL SEQRES 1 C 16 ORN ALA VAL LEU PHI VAL GLY SER ORN VAL HIS GLY MVA SEQRES 2 C 16 ALA THR VAL SEQRES 1 D 16 ORN ALA VAL LEU PHI VAL GLY SER ORN VAL HIS GLY MVA SEQRES 2 D 16 ALA THR VAL SEQRES 1 E 16 ORN ALA VAL LEU PHI VAL GLY SER ORN VAL HIS GLY MVA SEQRES 2 E 16 ALA THR VAL SEQRES 1 F 16 ORN ALA VAL LEU PHI VAL GLY SER ORN VAL HIS GLY MVA SEQRES 2 F 16 ALA THR VAL HET ORN A 1 19 HET PHI A 5 20 HET ORN A 9 19 HET MVA A 13 19 HET ORN B 1 19 HET PHI B 5 20 HET ORN B 9 18 HET MVA B 13 19 HET ORN C 1 19 HET PHI C 5 20 HET ORN C 9 18 HET MVA C 13 19 HET ORN D 1 19 HET PHI D 5 20 HET ORN D 9 19 HET MVA D 13 19 HET ORN E 1 19 HET PHI E 5 20 HET ORN E 9 19 HET MVA E 13 19 HET ORN F 1 19 HET PHI F 5 35 HET ORN F 9 19 HET MVA F 13 19 HET CL A 101 1 HET CL A 102 1 HET MPD B 101 22 HET SO4 B 102 5 HET MRD C 101 22 HET CL D 101 1 HETNAM ORN L-ORNITHINE HETNAM PHI IODO-PHENYLALANINE HETNAM MVA N-METHYLVALINE HETNAM CL CHLORIDE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM SO4 SULFATE ION HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL FORMUL 1 ORN 12(C5 H12 N2 O2) FORMUL 1 PHI 6(C9 H10 I N O2) FORMUL 1 MVA 6(C6 H13 N O2) FORMUL 7 CL 3(CL 1-) FORMUL 9 MPD C6 H14 O2 FORMUL 10 SO4 O4 S 2- FORMUL 11 MRD C6 H14 O2 FORMUL 13 HOH *106(H2 O) SHEET 1 AA1 6 ALA C 2 GLY C 7 0 SHEET 2 AA1 6 HIS C 11 VAL C 16 -1 O GLY C 12 N VAL C 6 SHEET 3 AA1 6 HIS A 11 THR A 15 -1 N HIS A 11 O THR C 15 SHEET 4 AA1 6 VAL A 3 GLY A 7 -1 N LEU A 4 O ALA A 14 SHEET 5 AA1 6 VAL F 10 VAL F 16 -1 O HIS F 11 N PHI A 5 SHEET 6 AA1 6 ALA F 2 GLY F 7 -1 N VAL F 6 O GLY F 12 SHEET 1 AA2 6 ALA B 2 GLY B 7 0 SHEET 2 AA2 6 VAL B 10 VAL B 16 -1 O ALA B 14 N LEU B 4 SHEET 3 AA2 6 PHI E 5 GLY E 7 -1 O PHI E 5 N HIS B 11 SHEET 4 AA2 6 VAL E 10 MVA E 13 -1 O GLY E 12 N VAL E 6 SHEET 5 AA2 6 ALA D 2 GLY D 7 -1 N PHI D 5 O HIS E 11 SHEET 6 AA2 6 HIS D 11 VAL D 16 -1 O GLY D 12 N VAL D 6 LINK NE ORN A 1 C VAL A 16 1555 1555 1.38 LINK C ORN A 1 N ALA A 2 1555 1555 1.37 LINK C LEU A 4 N PHI A 5 1555 1555 1.33 LINK C PHI A 5 N VAL A 6 1555 1555 1.32 LINK C SER A 8 NE ORN A 9 1555 1555 1.38 LINK C ORN A 9 N VAL A 10 1555 1555 1.36 LINK C GLY A 12 N MVA A 13 1555 1555 1.32 LINK C MVA A 13 N ALA A 14 1555 1555 1.32 LINK NE ORN B 1 C VAL B 16 1555 1555 1.37 LINK C ORN B 1 N ALA B 2 1555 1555 1.37 LINK C LEU B 4 N PHI B 5 1555 1555 1.32 LINK C PHI B 5 N VAL B 6 1555 1555 1.32 LINK C SER B 8 NE ORN B 9 1555 1555 1.37 LINK C ORN B 9 N VAL B 10 1555 1555 1.37 LINK C GLY B 12 N MVA B 13 1555 1555 1.33 LINK C MVA B 13 N ALA B 14 1555 1555 1.33 LINK NE ORN C 1 C VAL C 16 1555 1555 1.37 LINK C ORN C 1 N ALA C 2 1555 1555 1.37 LINK C LEU C 4 N PHI C 5 1555 1555 1.32 LINK C PHI C 5 N VAL C 6 1555 1555 1.32 LINK C SER C 8 NE ORN C 9 1555 1555 1.38 LINK C ORN C 9 N VAL C 10 1555 1555 1.36 LINK C GLY C 12 N MVA C 13 1555 1555 1.34 LINK C MVA C 13 N ALA C 14 1555 1555 1.32 LINK NE ORN D 1 C VAL D 16 1555 1555 1.37 LINK C ORN D 1 N ALA D 2 1555 1555 1.37 LINK C LEU D 4 N PHI D 5 1555 1555 1.33 LINK C PHI D 5 N VAL D 6 1555 1555 1.32 LINK C SER D 8 NE ORN D 9 1555 1555 1.38 LINK C ORN D 9 N VAL D 10 1555 1555 1.37 LINK C GLY D 12 N MVA D 13 1555 1555 1.33 LINK C MVA D 13 N ALA D 14 1555 1555 1.32 LINK NE ORN E 1 C VAL E 16 1555 1555 1.37 LINK C ORN E 1 N ALA E 2 1555 1555 1.37 LINK C LEU E 4 N PHI E 5 1555 1555 1.32 LINK C PHI E 5 N VAL E 6 1555 1555 1.32 LINK C SER E 8 NE ORN E 9 1555 1555 1.37 LINK C ORN E 9 N VAL E 10 1555 1555 1.37 LINK C GLY E 12 N MVA E 13 1555 1555 1.33 LINK C MVA E 13 N ALA E 14 1555 1555 1.33 LINK NE ORN F 1 C VAL F 16 1555 1555 1.38 LINK C ORN F 1 N ALA F 2 1555 1555 1.37 LINK C LEU F 4 N PHI F 5 1555 1555 1.33 LINK C PHI F 5 N VAL F 6 1555 1555 1.33 LINK C SER F 8 NE ORN F 9 1555 1555 1.37 LINK C ORN F 9 N VAL F 10 1555 1555 1.37 LINK C GLY F 12 N MVA F 13 1555 1555 1.34 LINK C MVA F 13 N ALA F 14 1555 1555 1.32 SITE 1 AC1 2 ORN A 9 HOH B 207 SITE 1 AC2 4 HIS A 11 HOH A 207 HIS F 11 HOH F 108 SITE 1 AC3 3 GLY B 7 SER B 8 VAL B 10 SITE 1 AC4 1 HOH B 201 SITE 1 AC5 3 MVA A 13 MVA C 13 LEU F 4 SITE 1 AC6 3 HIS D 11 HOH D 207 HIS E 11 CRYST1 77.518 77.518 77.518 90.00 90.00 90.00 P 21 3 72 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012900 0.00000 HETATM 1 N ORN A 1 26.330 45.167 79.252 1.00 54.71 N ANISOU 1 N ORN A 1 7062 5661 8063 -535 2243 -1640 N HETATM 2 CA ORN A 1 25.717 44.247 78.270 1.00 51.74 C ANISOU 2 CA ORN A 1 6548 5434 7677 -300 2074 -1205 C HETATM 3 CB ORN A 1 25.584 44.930 76.897 1.00 50.52 C ANISOU 3 CB ORN A 1 6387 4911 7897 27 2139 -935 C HETATM 4 CG ORN A 1 24.179 44.781 76.295 1.00 48.43 C ANISOU 4 CG ORN A 1 5927 4764 7709 420 2187 -757 C HETATM 5 CD ORN A 1 24.078 45.293 74.866 1.00 47.37 C ANISOU 5 CD ORN A 1 5783 4384 7832 803 2184 -410 C HETATM 6 NE ORN A 1 24.118 44.179 73.945 1.00 46.12 N ANISOU 6 NE ORN A 1 5456 4553 7514 832 1900 -104 N HETATM 7 C ORN A 1 26.565 42.985 78.161 1.00 50.88 C ANISOU 7 C ORN A 1 6428 5618 7286 -493 1743 -989 C HETATM 8 O ORN A 1 27.787 43.027 78.271 1.00 52.65 O ANISOU 8 O ORN A 1 6721 5830 7452 -690 1611 -1055 O HETATM 9 H2 ORN A 1 26.639 44.698 80.107 1.00 65.65 H HETATM 10 H ORN A 1 27.156 45.650 78.893 1.00 65.65 H HETATM 11 H3 ORN A 1 25.696 45.908 79.563 1.00 65.65 H HETATM 12 HA ORN A 1 24.749 43.959 78.691 1.00 62.09 H HETATM 13 HB2 ORN A 1 26.307 44.488 76.197 1.00 60.62 H HETATM 14 HB3 ORN A 1 25.782 46.005 77.010 1.00 60.62 H HETATM 15 HG2 ORN A 1 23.468 45.336 76.918 1.00 58.11 H HETATM 16 HG3 ORN A 1 23.905 43.720 76.307 1.00 58.11 H HETATM 17 HD2 ORN A 1 24.923 45.958 74.664 1.00 56.85 H HETATM 18 HD3 ORN A 1 23.127 45.821 74.744 1.00 56.85 H HETATM 19 HE1 ORN A 1 24.814 43.466 74.152 1.00 55.34 H